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ONTOLOGY REPORT - ANNOTATIONS


Term:COPII vesicle coating
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Accession:GO:0048208 term browser browse the term
Definition:The addition of COPII proteins and adaptor proteins to ER membranes during the formation of transport vesicles, forming a vesicle coat.
Synonyms:exact_synonym: COPII coating of ER-derived vesicle;   COPII vesicle coat assembly;   COPII vesicle coat formation


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COPII vesicle coating term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADIPOR1 adiponectin receptor 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:24,907,491...24,923,540 JBrowse link
G CUL3 cullin 3 IEA Ensembl GO_REF:0000107 NCBI chr15:126,191,605...126,287,148
Ensembl chr15:126,189,851...126,287,037
JBrowse link
G KLHL12 kelch like family member 12 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:24,869,816...24,902,981 JBrowse link
G PDCD6 programmed cell death 6 ISO (PMID:27716508) UniProtKB PMID:27716508 NCBI chr16:79,818,960...79,832,272
Ensembl chr16:79,818,956...79,832,497
JBrowse link
G PEF1 penta-EF-hand domain containing 1 IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr 6:88,152,232...88,170,327
Ensembl chr 6:88,152,235...88,170,251
JBrowse link
G PREB prolactin regulatory element binding ISO PMID:11422940 UniProt PMID:11422940 RGD:11344947 NCBI chr 3:111,992,364...111,996,194
Ensembl chr 3:111,992,391...112,023,505
JBrowse link
G SEC16A SEC16 homolog A, endoplasmic reticulum export factor IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002
G SEC16B SEC16 homolog B, endoplasmic reticulum export factor IBA
IEA
(PMID:21873635) GO_Central
InterPro
PMID:21873635 GO_REF:0000002 NCBI chr 9:119,778,660...119,842,962
Ensembl chr 9:119,778,663...119,842,930
JBrowse link
G TFG trafficking from ER to golgi regulator IEA InterPro GO_REF:0000002 NCBI chr13:158,291,090...158,326,902
Ensembl chr13:158,288,131...158,326,885
JBrowse link
regulation of COPII vesicle coating term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MAPK15 mitogen-activated protein kinase 15 IEA Ensembl GO_REF:0000107 NCBI chr 4:909,266...915,537
Ensembl chr 4:902,439...915,475
JBrowse link
G PREB prolactin regulatory element binding IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:111,992,364...111,996,194
Ensembl chr 3:111,992,391...112,023,505
JBrowse link
G SAR1A secretion associated Ras related GTPase 1A IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:73,090,936...73,108,209
Ensembl chr14:73,090,943...73,108,156
JBrowse link
G SAR1B secretion associated Ras related GTPase 1B IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:136,848,843...136,874,248
Ensembl chr 2:136,843,965...136,874,222
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16524
    cellular process 15756
      vesicle targeting 41
        vesicle targeting, to, from or within Golgi 23
          vesicle targeting, rough ER to cis-Golgi 12
            COPII vesicle coating 12
              regulation of COPII vesicle coating 4
Path 2
Term Annotations click to browse term
  biological_process 16524
    cellular process 15756
      cellular localization 2749
        organelle localization 541
          vesicle localization 177
            establishment of vesicle localization 158
              vesicle targeting 41
                vesicle targeting, to, from or within Golgi 23
                  vesicle targeting, rough ER to cis-Golgi 12
                    COPII vesicle coating 12
                      regulation of COPII vesicle coating 4
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.