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ONTOLOGY REPORT - ANNOTATIONS


Term:clathrin coat assembly
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Accession:GO:0048268 term browser browse the term
Definition:The process that results in the assembly of clathrin triskelia into the ordered structure known as a clathrin cage.
Synonyms:exact_synonym: clathrin cage assembly


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clathrin coat assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap1b1 adaptor related protein complex 1 subunit beta 1 IDA PMID:8262066 BHF-UCL PMID:8262066 RGD:2306271 NCBI chr14:85,230,652...85,281,806
Ensembl chr14:85,230,648...85,281,803
JBrowse link
G Ap2b1 adaptor related protein complex 2 subunit beta 1 IDA RGD PMID:8262066 RGD:2306271 NCBI chr10:70,516,462...70,621,973
Ensembl chr10:70,520,206...70,621,977
JBrowse link
G Caly calcyon neuron-specific vesicular protein ISO
IBA
ISS
(PMID:16595675)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:16595675, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 1:212,537,851...212,549,040
Ensembl chr 1:212,537,848...212,549,477
JBrowse link
G Clint1 clathrin interactor 1 IMP RGD PMID:12213833 RGD:1303953 NCBI chr10:30,833,914...31,007,813
Ensembl chr10:30,833,914...31,007,820
JBrowse link
G Clta clathrin, light chain A ISO
IBA
(PMID:11756460)
PMID:21873635
RGD PMID:11756460, PMID:21873635 RGD:13792537 NCBI chr 5:59,490,689...59,509,139
Ensembl chr 5:59,491,096...59,509,138
JBrowse link
G Cltb clathrin, light chain B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:10,537,348...10,554,999
Ensembl chr17:10,537,365...10,554,989
JBrowse link
G Cltc clathrin heavy chain ISO
IBA
(PMID:11756460)
PMID:21873635
RGD PMID:11756460, PMID:21873635 RGD:13792537 NCBI chr10:74,014,560...74,070,578
Ensembl chr10:74,014,562...74,070,266
JBrowse link
G Dab2 DAB adaptor protein 2 IMP
ISO
(MGI:MGI:5442514|PMID:12234931) RGD PMID:12234931, PMID:19000037 MGI:MGI:5442514, RGD:7243162 NCBI chr 2:55,747,353...55,768,848
Ensembl chr 2:55,747,318...55,768,270
JBrowse link
G Eps15 epidermal growth factor receptor pathway substrate 15 ISO (PMID:12807910) RGD PMID:12807910 NCBI chr 5:128,923,809...129,022,268
Ensembl chr 5:128,923,934...129,022,054
JBrowse link
G Fcho1 FCH and mu domain containing endocytic adaptor 1 ISO
IBA
(PMID:20448150)
PMID:21873635
RGD PMID:20448150, PMID:21873635 RGD:13792537 NCBI chr16:20,136,008...20,153,344
Ensembl chr16:20,136,008...20,148,867
JBrowse link
G Fcho2 FCH and mu domain containing endocytic adaptor 2 ISO
IBA
ISS
(PMID:20448150)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:20448150, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 2:28,927,918...29,029,271
Ensembl chr 2:28,926,107...29,029,176
JBrowse link
G Hip1 huntingtin interacting protein 1 IDA
IBA
ISO
PMID:21873635
(PMID:11577110), (PMID:11889126)
RGD PMID:11577110, PMID:11889126, PMID:11889126, PMID:21873635 RGD:708337, RGD:13792537 NCBI chr12:24,180,795...24,315,373
Ensembl chr12:24,180,937...24,315,373
JBrowse link
G Hip1r huntingtin interacting protein 1 related ISO
IBA
(MGI:MGI:5805370|PMID:11564758)
PMID:21873635
RGD PMID:11564758, PMID:21873635 MGI:MGI:5805370, RGD:13792537 NCBI chr12:38,024,517...38,053,184
Ensembl chr12:38,024,519...38,053,085
JBrowse link
G Nsg1 neuronal vesicle trafficking associated 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:77,380,264...77,402,007
Ensembl chr14:77,380,262...77,401,996
JBrowse link
G Nsg2 neuronal vesicle trafficking associated 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:15,867,885...15,928,169
Ensembl chr10:15,867,887...15,928,169
JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein IDA
IEA
ISO
GO_REF:0000107
GO_REF:0000002
(PMID:16262731)
Ensembl
InterPro
RGD
PMID:16262731, PMID:11190274 GO_REF:0000002, GO_REF:0000107, RGD:1600754 NCBI chr 1:154,377,229...154,458,966
Ensembl chr 1:154,377,247...154,458,425
JBrowse link
G Sgip1 SH3GL interacting endocytic adaptor 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:122,300,415...122,498,478
Ensembl chr 5:122,390,522...122,491,203
JBrowse link
G Snap91 synaptosome associated protein 91 IEA
ISO
GO_REF:0000002
(MGI:MGI:4418638|PMID:11102472), (MGI:MGI:4418641|PMID:10428863), (MGI:MGI:4418645|PMID:9045662)
InterPro
RGD
PMID:9045662, PMID:10428863, PMID:11102472 GO_REF:0000002, MGI:MGI:4418638, MGI:MGI:4418641, MGI:MGI:4418645 NCBI chr 8:94,447,558...94,564,772
Ensembl chr 8:94,447,550...94,564,525
JBrowse link
positive regulation of clathrin coat assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Caly calcyon neuron-specific vesicular protein IDA RGD PMID:16595675 RGD:11056251 NCBI chr 1:212,537,851...212,549,040
Ensembl chr 1:212,537,848...212,549,477
JBrowse link
G Epn1 Epsin 1 IMP PMID:11756460 CAFA PMID:11756460 RGD:12793027 NCBI chr 1:72,294,153...72,310,217
Ensembl chr 1:72,294,153...72,311,856
JBrowse link
G Hip1r huntingtin interacting protein 1 related ISO (MGI:MGI:5763378|PMID:15533940) RGD PMID:15533940 MGI:MGI:5763378 NCBI chr12:38,024,517...38,053,184
Ensembl chr12:38,024,519...38,053,085
JBrowse link
G Snap91 synaptosome associated protein 91 IMP PMID:11756460 CAFA PMID:11756460 RGD:12793027 NCBI chr 8:94,447,558...94,564,772
Ensembl chr 8:94,447,550...94,564,525
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20014
    cellular process 18788
      cellular component organization or biogenesis 6766
        cellular component organization 6510
          cellular component assembly 2967
            protein-containing complex assembly 1603
              cellular protein-containing complex assembly 1130
                clathrin coat assembly 19
                  clathrin coat assembly involved in endocytosis 0
                  clathrin coating of Golgi vesicle + 0
                  negative regulation of clathrin coat assembly 0
                  positive regulation of clathrin coat assembly 4
                  regulation of clathrin coat assembly + 4
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.