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ONTOLOGY REPORT - ANNOTATIONS


Term:oogenesis
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Accession:GO:0048477 term browser browse the term
Definition:The complete process of formation and maturation of an ovum or female gamete from a primordial female germ cell. Examples of this process are found in Mus musculus and Drosophila melanogaster.
Synonyms:exact_synonym: ovum development
 alt_id: GO:0009993;   GO:0048157
 xref: Wikipedia:Oogenesis
 only_in_taxon: NCBITaxon:33208 ! Metazoa


show annotations for term's descendants           Sort by:
 
oogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adrm1 adhesion regulating molecule 1 ISO (MGI:MGI:4849324|PMID:21048919) RGD PMID:21048919 MGI:MGI:4849324 NCBI chr 3:175,548,181...175,552,943
Ensembl chr 3:175,548,174...175,552,947
JBrowse link
G Aspm assembly factor for spindle microtubules ISO MGI:MGI:4345319 (MGI:MGI:4833883|PMID:20823249) RGD PMID:20823249 MGI:MGI:4833883 NCBI chr13:56,546,021...56,591,793
Ensembl chr13:56,546,021...56,591,793
JBrowse link
G Ddx20 DEAD-box helicase 20 ISO MGI:MGI:3795148 (MGI:MGI:3794946|PMID:18258677) RGD PMID:18258677 MGI:MGI:3794946 NCBI chr 2:208,144,142...208,154,764
Ensembl chr 2:208,144,139...208,152,179
JBrowse link
G Dmc1 DNA meiotic recombinase 1 ISO MGI:MGI:2176331|MGI:MGI:3028590 (MGI:MGI:3610823|PMID:15928951) RGD PMID:15928951 MGI:MGI:3610823 NCBI chr 7:120,796,217...120,840,524
Ensembl chr 7:120,796,217...120,839,577
JBrowse link
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit ISO MGI:MGI:2158940 (MGI:MGI:2446381|PMID:12466203) RGD PMID:12466203 MGI:MGI:2446381 NCBI chr 1:80,256,973...80,268,198
Ensembl chr 1:80,256,973...80,268,198
JBrowse link
G Fmn2 formin 2 ISO (MGI:MGI:2448435|PMID:12447394) RGD PMID:12447394 MGI:MGI:2448435 NCBI chr13:92,569,256...92,887,302 JBrowse link
G H3f3a H3 histone family member 3A ISO MGI:MGI:1101768 (MGI:MGI:5661094|PMID:25675407) RGD PMID:25675407 MGI:MGI:5661094 NCBI chr13:99,091,246...99,102,828
Ensembl chr13:99,091,763...99,101,208
JBrowse link
G H3f3b H3 histone family member 3B ISO MGI:MGI:1097686 (MGI:MGI:5661094|PMID:25675407) RGD PMID:25675407 MGI:MGI:5661094 NCBI chr10:104,573,666...104,575,890
Ensembl chr10:104,573,664...104,575,890
JBrowse link
G Hexb hexosaminidase subunit beta ISO
IEA
MGI:MGI:2429701 (MGI:MGI:894862|PMID:9223328)
GO_REF:0000107
RGD
Ensembl
PMID:9223328 GO_REF:0000107, MGI:MGI:894862 NCBI chr 2:27,983,925...28,003,260
Ensembl chr 2:27,984,117...28,003,186
JBrowse link
G Hormad1 HORMA domain containing 1 ISS
ISO
GO_REF:0000024
(MGI:MGI:4868505|PMID:21079677), (MGI:MGI:5009722|PMID:21478856)
UniProt
RGD
PMID:21079677, PMID:21478856 GO_REF:0000024, MGI:MGI:4868505, MGI:MGI:5009722 NCBI chr 2:197,681,820...197,720,197
Ensembl chr 2:197,682,000...197,719,254
JBrowse link
G Iho1 interactor of HORMAD1 1 ISO (MGI:MGI:5822944|PMID:27723721) RGD PMID:27723721 MGI:MGI:5822944 NCBI chr 8:117,182,484...117,215,390
Ensembl chr 8:117,183,343...117,211,170
JBrowse link
G Kash5 KASH domain containing 5 ISO (MGI:MGI:5515826|PMID:24062341) RGD PMID:24062341 MGI:MGI:5515826 NCBI chr 1:101,180,497...101,203,048
Ensembl chr 1:101,180,657...101,198,801
JBrowse link
G Kmt2d lysine methyltransferase 2D ISO (MGI:MGI:4849597|PMID:20808952) RGD PMID:20808952 MGI:MGI:4849597 NCBI chr 7:140,507,137...140,542,479
Ensembl chr 7:140,489,492...140,546,908
JBrowse link
G LOC103689943 meiosis arrest female protein 1-like ISO (MGI:MGI:5314262|PMID:22442484) RGD PMID:22442484 MGI:MGI:5314262 NCBI chr10:28,267...72,912
Ensembl chr10:28,243...72,912
JBrowse link
G Marf1 meiosis regulator and mRNA stability factor 1 ISS
ISO
GO_REF:0000024
(MGI:MGI:5314262|PMID:22442484)
UniProt
RGD
PMID:22442484 GO_REF:0000024, MGI:MGI:5314262 NCBI chr10:908,806...953,481
Ensembl chr10:908,806...953,474
JBrowse link
G Mcmdc2 minichromosome maintenance domain containing 2 ISO
IEA
MGI:MGI:2178050|MGI:MGI:5511194 (MGI:MGI:5805564|PMID:27760146)
GO_REF:0000107
RGD
Ensembl
PMID:27760146 GO_REF:0000107, MGI:MGI:5805564 NCBI chr 5:8,973,861...9,039,616
Ensembl chr 5:8,978,010...9,038,594
JBrowse link
G Mdk midkine ISS
ISO
GO_REF:0000024
(MGI:MGI:3718185|PMID:17121547)
UniProt
RGD
PMID:17121547 GO_REF:0000024, MGI:MGI:3718185 NCBI chr 3:80,841,003...80,843,895
Ensembl chr 3:80,841,005...80,842,916
JBrowse link
G Mei1 meiotic double-stranded break formation protein 1 ISO MGI:MGI:105393|MGI:MGI:2176973 (MGI:MGI:3610823|PMID:15928951) RGD PMID:15928951 MGI:MGI:3610823 NCBI chr 7:123,308,041...123,361,391
Ensembl chr 7:123,308,041...123,361,391
JBrowse link
G Mei4 meiotic double-stranded break formation protein 4 ISO
IBA
MGI:MGI:4818799 (MGI:MGI:4457793|PMID:20551173)
PMID:21873635
RGD PMID:20551173, PMID:21873635 MGI:MGI:4457793, RGD:13792537 NCBI chr 8:89,369,417...89,556,942
Ensembl chr 8:89,369,417...89,556,942
JBrowse link
G Mlh1 mutL homolog 1 ISO
IEA
MGI:MGI:1858054 (MGI:MGI:81371|PMID:8674118)
GO_REF:0000107
RGD
Ensembl
PMID:8674118 GO_REF:0000107, MGI:MGI:81371 NCBI chr 8:119,486,655...119,523,716
Ensembl chr 8:119,486,691...119,523,964
JBrowse link
G Nanos1 nanos C2HC-type zinc finger 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:282,134,676...282,140,370
Ensembl chr 1:282,134,981...282,135,772
JBrowse link
G Nanos2 nanos C2HC-type zinc finger 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:79,894,450...79,895,910
Ensembl chr 1:79,894,450...79,895,910
JBrowse link
G Nanos3 nanos C2HC-type zinc finger 3 ISO
IBA
MGI:MGI:2682607 (MGI:MGI:2680516|PMID:12947200)
PMID:21873635
RGD PMID:12947200, PMID:21873635 MGI:MGI:2680516, RGD:13792537 NCBI chr19:25,284,907...25,288,680
Ensembl chr19:25,284,909...25,288,335
JBrowse link
G Piwil2 piwi-like RNA-mediated gene silencing 2 ISO (PMID:18404146) RGD PMID:18404146 NCBI chr15:52,037,693...52,116,277
Ensembl chr15:52,037,693...52,116,001
JBrowse link
G Ptn pleiotrophin ISS
ISO
GO_REF:0000024
(MGI:MGI:3718185|PMID:17121547)
UniProt
RGD
PMID:17121547 GO_REF:0000024, MGI:MGI:3718185 NCBI chr 4:64,239,156...64,330,996
Ensembl chr 4:64,239,158...64,330,996
JBrowse link
G Sebox SEBOX homeobox ISO
IEA
(MGI:MGI:5463536|PMID:22805237)
GO_REF:0000107
RGD
Ensembl
PMID:22805237 GO_REF:0000107, MGI:MGI:5463536 NCBI chr10:65,771,370...65,774,748
Ensembl chr10:65,772,443...65,773,314
JBrowse link
G Six6os1 Six6 opposite strand transcript 1 ISO
IBA
(MGI:MGI:5822939|PMID:27796301)
PMID:21873635
RGD PMID:27796301, PMID:21873635 MGI:MGI:5822939, RGD:13792537 NCBI chr 6:95,761,718...95,797,314
Ensembl chr 6:95,762,332...95,796,502
JBrowse link
G Sohlh1 spermatogenesis and oogenesis specific basic helix-loop-helix 1 ISO MGI:MGI:3629211 (MGI:MGI:3639633|PMID:16690745) RGD PMID:16690745 MGI:MGI:3639633 NCBI chr 3:3,290,766...3,295,226
Ensembl chr 3:3,291,084...3,295,101
JBrowse link
G Spo11 SPO11, initiator of meiotic double stranded breaks ISO MGI:MGI:2178805 (MGI:MGI:5586966|PMID:22530760) RGD PMID:22530760 MGI:MGI:5586966 NCBI chr 3:170,991,573...171,008,226
Ensembl chr 3:170,994,038...171,013,185
JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase ISO MGI:MGI:1857247 (MGI:MGI:3589531|PMID:16007215) RGD PMID:16007215 MGI:MGI:3589531 NCBI chr 3:153,547,807...153,595,643
Ensembl chr 3:153,580,861...153,595,642
JBrowse link
G Stra8 stimulated by retinoic acid 8 ISO (MGI:MGI:6441108|PMID:32032549) RGD PMID:32032549 MGI:MGI:6441108 NCBI chr 4:62,447,724...62,474,802
Ensembl chr 4:62,457,694...62,473,360
JBrowse link
G Trip13 thyroid hormone receptor interactor 13 ISO
ISS
(MGI:MGI:4821667|PMID:20711356)
GO_REF:0000024
RGD
UniProt
PMID:20711356 GO_REF:0000024, MGI:MGI:4821667 NCBI chr 1:31,967,980...32,012,923
Ensembl chr 1:31,967,978...32,012,919
JBrowse link
G Ybx2 Y box binding protein 2 ISO MGI:MGI:3576937 (MGI:MGI:3576442|PMID:15824319) RGD PMID:15824319 MGI:MGI:3576442 NCBI chr10:56,546,689...56,552,339
Ensembl chr10:56,546,710...56,551,863
JBrowse link
egg coat formation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zp3 zona pellucida glycoprotein 3 ISS
IEA
IBA
ISO
GO_REF:0000024
GO_REF:0000104
PMID:21873635
(MGI:MGI:2682187|PMID:14645511), (MGI:MGI:4943385|PMID:18420282)
UniProt
RGD
PMID:14645511, PMID:18420282, PMID:21873635 GO_REF:0000024, GO_REF:0000104, MGI:MGI:2682187, MGI:MGI:4943385, RGD:13792537 NCBI chr12:23,735,225...23,752,734
Ensembl chr12:23,735,223...23,742,190
JBrowse link
mammalian oogenesis stage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100911372 40S ribosomal protein S6-like IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 5:105,209,844...105,212,791
Ensembl chr 5:105,209,846...105,212,173
JBrowse link
G Rps6 ribosomal protein S6 ISO
IEA
MGI:MGI:2387471 (MGI:MGI:3696931|PMID:17000767)
GO_REF:0000107
RGD
Ensembl
PMID:17000767 GO_REF:0000107, MGI:MGI:3696931 NCBI chr 5:105,197,821...105,200,681
Ensembl chr 5:105,197,857...105,200,148
JBrowse link
meiotic cell cycle process involved in oocyte maturation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk1 cyclin-dependent kinase 1 ISO (PMID:19550110), (PMID:24374180) RGD PMID:19550110, PMID:24374180 NCBI chr20:20,576,341...20,591,510
Ensembl chr20:20,576,377...20,591,549
JBrowse link
G Kif20a kinesin family member 20A ISO (PMID:25036038) RGD PMID:25036038 NCBI chr18:27,424,328...27,432,814
Ensembl chr18:27,424,328...27,432,814
JBrowse link
negative regulation of meiotic cell cycle process involved in oocyte maturation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccnb1 cyclin B1 ISO (PMID:12954723) RGD PMID:12954723 NCBI chr 2:30,782,133...30,791,106
Ensembl chr 2:30,783,915...30,791,221
JBrowse link
G Ccnb2 cyclin B2 ISO (PMID:12954723) RGD PMID:12954723 NCBI chr 8:76,847,972...76,861,165 JBrowse link
G Fzr1 fizzy and cell division cycle 20 related 1 ISO (PMID:18753608) RGD PMID:18753608 NCBI chr 7:11,201,690...11,213,614
Ensembl chr 7:11,201,690...11,213,613
JBrowse link
G Gpr3 G protein-coupled receptor 3 ISO (PMID:22685609) RGD PMID:22685609 NCBI chr 5:151,394,118...151,397,634
Ensembl chr 5:151,394,524...151,397,603
JBrowse link
G Grb14 growth factor receptor bound protein 14 IMP PMID:14623073 CAFA PMID:14623073 RGD:12793049 NCBI chr 3:50,937,403...51,054,447
Ensembl chr 3:50,937,669...51,054,378
JBrowse link
G Prkaca protein kinase cAMP-activated catalytic subunit alpha ISO (PMID:22674394) RGD PMID:22674394 NCBI chr19:25,095,089...25,118,869
Ensembl chr19:25,095,089...25,118,860
JBrowse link
negative regulation of oocyte development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Igf1 insulin-like growth factor 1 ISO
IEA
(PMID:21543511)
GO_REF:0000107
RGD
Ensembl
PMID:21543511 GO_REF:0000107 NCBI chr 7:28,412,123...28,491,815
Ensembl chr 7:28,412,198...28,486,609
JBrowse link
negative regulation of oocyte maturation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpr3 G protein-coupled receptor 3 ISO (PMID:22685609) RGD PMID:22685609 NCBI chr 5:151,394,118...151,397,634
Ensembl chr 5:151,394,524...151,397,603
JBrowse link
G Nppc natriuretic peptide C ISO (PMID:20947764)
MGI:MGI:2388899 (MGI:MGI:4835576|PMID:20947764)
RGD PMID:20947764 MGI:MGI:4835576 NCBI chr 9:93,731,436...93,735,636
Ensembl chr 9:93,731,436...93,735,636
JBrowse link
G Npr2 natriuretic peptide receptor 2 ISO MGI:MGI:2152891 (MGI:MGI:4835576|PMID:20947764) RGD PMID:20947764 MGI:MGI:4835576 NCBI chr 5:59,128,186...59,147,321
Ensembl chr 5:59,128,315...59,147,255
JBrowse link
G Shb SH2 domain containing adaptor protein B ISO MGI:MGI:3721903 (MGI:MGI:4462301|PMID:20585392) RGD PMID:20585392 MGI:MGI:4462301 NCBI chr 5:60,970,650...61,077,881
Ensembl chr 5:60,971,257...61,077,627
JBrowse link
G Wee2 WEE2 oocyte meiosis inhibiting kinase ISO (MGI:MGI:3604224|PMID:16169490), (MGI:MGI:4948986|PMID:21454751) RGD PMID:16169490, PMID:21454751 MGI:MGI:3604224, MGI:MGI:4948986 NCBI chr 4:68,604,770...68,631,341
Ensembl chr 4:68,608,137...68,629,925
JBrowse link
oocyte development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase ISO MGI:MGI:1926875 (MGI:MGI:3691999|PMID:11536012) RGD PMID:11536012 MGI:MGI:3691999 NCBI chr 8:58,015,938...58,119,973
Ensembl chr 8:58,015,940...58,120,045
JBrowse link
G Aurkc aurora kinase C IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:69,958,452...69,964,546
Ensembl chr 1:69,958,452...69,963,592
JBrowse link
G Bcl2 BCL2, apoptosis regulator ISO
IEA
MGI:MGI:1857134 (MGI:MGI:75799|PMID:7628407)
GO_REF:0000107
RGD
Ensembl
PMID:7628407 GO_REF:0000107, MGI:MGI:75799 NCBI chr13:26,605,426...26,769,374
Ensembl chr13:26,605,426...26,769,374
JBrowse link
G Ctnnb1 catenin beta 1 ISO
IEA
MGI:MGI:98957 (MGI:MGI:4454604|PMID:20454446)
GO_REF:0000107
RGD
Ensembl
PMID:20454446 GO_REF:0000107, MGI:MGI:4454604 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Dmrt1 doublesex and mab-3 related transcription factor 1 ISO MGI:MGI:2385912 (MGI:MGI:5285037|PMID:21621532) RGD PMID:21621532 MGI:MGI:5285037 NCBI chr 1:243,477,403...243,582,629
Ensembl chr 1:243,477,493...243,582,629
JBrowse link
G Ezhip EZH inhibitory protein ISO MGI:MGI:6404408 (MGI:MGI:6362099|PMID:31451685) RGD PMID:31451685 MGI:MGI:6362099 NCBI chr  X:17,250,334...17,253,582
Ensembl chr  X:17,250,687...17,252,877
JBrowse link
G Inhbb inhibin subunit beta B ISO
IEA
MGI:MGI:98957 (MGI:MGI:4454604|PMID:20454446)
GO_REF:0000107
RGD
Ensembl
PMID:20454446 GO_REF:0000107, MGI:MGI:4454604 NCBI chr13:35,436,532...35,442,222
Ensembl chr13:35,436,532...35,442,222
JBrowse link
G Meioc meiosis specific with coiled-coil domain ISO (MGI:MGI:5770021|PMID:26742488), (MGI:MGI:5905073|PMID:28380054) RGD PMID:26742488, PMID:28380054 MGI:MGI:5770021, MGI:MGI:5905073 NCBI chr10:90,622,954...90,641,883
Ensembl chr10:90,622,992...90,642,151
JBrowse link
G Wnt4 Wnt family member 4 IEA
ISO
GO_REF:0000107
MGI:MGI:1857453|MGI:MGI:88276|MGI:MGI:96571 (MGI:MGI:1329753|PMID:9989404), (MGI:MGI:4454604|PMID:20454446)
Ensembl
RGD
PMID:9989404, PMID:20454446 GO_REF:0000107, MGI:MGI:1329753, MGI:MGI:4454604 NCBI chr 5:155,649,238...155,668,065
Ensembl chr 5:155,649,217...155,672,579
JBrowse link
G Ybx2 Y box binding protein 2 IEP RGD PMID:16150897 RGD:2311249 NCBI chr10:56,546,689...56,552,339
Ensembl chr10:56,546,710...56,551,863
JBrowse link
G Ythdc2 YTH domain containing 2 ISO (MGI:MGI:5911610|PMID:29033321), (MGI:MGI:6109052|PMID:29087293), (MGI:MGI:6113138|PMID:29360036) RGD PMID:29033321, PMID:29087293, PMID:29360036 MGI:MGI:5911610, MGI:MGI:6109052, MGI:MGI:6113138 NCBI chr 1:182,072,386...182,141,399
Ensembl chr 1:182,085,899...182,140,570
JBrowse link
G Zfx zinc finger protein X-linked ISO MGI:MGI:2450147 (MGI:MGI:892889|PMID:9187153) RGD PMID:9187153 MGI:MGI:892889 NCBI chr  X:63,158,368...63,204,971
Ensembl chr  X:63,158,976...63,204,530
JBrowse link
G Zglp1 zinc finger, GATA-like protein 1 IBA
ISO
PMID:21873635
MGI:MGI:2176180|MGI:MGI:3696745 (MGI:MGI:3695332|PMID:16982049), (MGI:MGI:6394204|PMID:32054698)
RGD PMID:16982049, PMID:32054698, PMID:21873635 MGI:MGI:3695332, MGI:MGI:6394204, RGD:13792537 NCBI chr 8:22,081,439...22,086,446
Ensembl chr 8:22,081,700...22,086,095
JBrowse link
G Zp3 zona pellucida glycoprotein 3 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:4943385|PMID:18420282)
Ensembl
UniProt
RGD
PMID:18420282 GO_REF:0000024, GO_REF:0000107, MGI:MGI:4943385 NCBI chr12:23,735,225...23,752,734
Ensembl chr12:23,735,223...23,742,190
JBrowse link
oocyte differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kmt2b lysine methyltransferase 2B ISO MGI:MGI:2176052|MGI:MGI:3056522|MGI:MGI:3623309 (MGI:MGI:4849597|PMID:20808952) RGD PMID:20808952 MGI:MGI:4849597 NCBI chr 1:89,022,889...89,042,176
Ensembl chr 1:89,023,200...89,042,176
JBrowse link
G Lgr5 leucine rich repeat containing G protein coupled receptor 5 ISO (MGI:MGI:5607814|PMID:25158167) RGD PMID:25158167 MGI:MGI:5607814 NCBI chr 7:58,447,097...58,587,787
Ensembl chr 7:58,448,277...58,587,787
JBrowse link
G Npm2 nucleophosmin/nucleoplasmin 2 ISO (PMID:12714744) RGD PMID:12714744 NCBI chr15:52,337,457...52,345,849
Ensembl chr15:52,337,528...52,344,629
JBrowse link
G Sohlh1 spermatogenesis and oogenesis specific basic helix-loop-helix 1 ISO (MGI:MGI:5913174|PMID:28504655) RGD PMID:28504655 MGI:MGI:5913174 NCBI chr 3:3,290,766...3,295,226
Ensembl chr 3:3,291,084...3,295,101
JBrowse link
G Sohlh2 spermatogenesis and oogenesis specific basic helix-loop-helix 2 ISO MGI:MGI:3839324 (MGI:MGI:3836097|PMID:18753606), (MGI:MGI:5913174|PMID:28504655) RGD PMID:18753606, PMID:28504655 MGI:MGI:3836097, MGI:MGI:5913174 NCBI chr 2:144,591,755...144,614,065
Ensembl chr 2:144,591,755...144,614,064
JBrowse link
oocyte growth term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxl2 forkhead box L2 IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 8:107,194,492...107,197,644
Ensembl chr 8:107,194,551...107,195,675
JBrowse link
G Gdf9 growth differentiation factor 9 ISO MGI:MGI:1930111 (MGI:MGI:3717961|PMID:17641088) RGD PMID:17641088 MGI:MGI:3717961 NCBI chr10:38,782,519...38,793,238
Ensembl chr10:38,788,992...38,792,940
JBrowse link
G Kmt2d lysine methyltransferase 2D ISO (MGI:MGI:4849597|PMID:20808952) RGD PMID:20808952 MGI:MGI:4849597 NCBI chr 7:140,507,137...140,542,479
Ensembl chr 7:140,489,492...140,546,908
JBrowse link
oocyte maturation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brca2 BRCA2, DNA repair associated ISO
IEA
MGI:MGI:2177233 (MGI:MGI:2683946|PMID:14660434)
GO_REF:0000107
RGD
Ensembl
PMID:14660434 GO_REF:0000107, MGI:MGI:2683946 NCBI chr12:503,660...544,754
Ensembl chr12:504,007...544,748
JBrowse link
G Ccnb1 cyclin B1 IMP RGD PMID:15291744 RGD:1578405 NCBI chr 2:30,782,133...30,791,106
Ensembl chr 2:30,783,915...30,791,221
JBrowse link
G Cdc25b cell division cycle 25B ISO
IEA
MGI:MGI:2682953 (MGI:MGI:2682954|PMID:11912493)
GO_REF:0000107
RGD
Ensembl
PMID:11912493 GO_REF:0000107, MGI:MGI:2682954 NCBI chr 3:123,731,539...123,741,696
Ensembl chr 3:123,731,539...123,741,339
JBrowse link
G Dazl deleted in azoospermia-like ISO (MGI:MGI:4946299|PMID:21460039) RGD PMID:21460039 MGI:MGI:4946299 NCBI chr 9:12,633,983...12,651,017
Ensembl chr 9:12,633,990...12,650,938
JBrowse link
G Dmc1 DNA meiotic recombinase 1 ISO MGI:MGI:2176331 (MGI:MGI:3719060|PMID:17696610) RGD PMID:17696610 MGI:MGI:3719060 NCBI chr 7:120,796,217...120,840,524
Ensembl chr 7:120,796,217...120,839,577
JBrowse link
G Ereg epiregulin IDA PMID:15459120 UniProt PMID:15459120 RGD:2316284 NCBI chr14:18,577,620...18,591,395
Ensembl chr14:18,576,355...18,591,394
JBrowse link
G Fbxo5 F-box protein 5 ISO (MGI:MGI:3521521|PMID:15526037) RGD PMID:15526037 MGI:MGI:3521521 NCBI chr 1:42,461,277...42,467,646
Ensembl chr 1:42,461,291...42,467,586
JBrowse link
G Foxo3 forkhead box O3 ISO MGI:MGI:2668328 (MGI:MGI:2667256|PMID:12855809) RGD PMID:12855809 MGI:MGI:2667256 NCBI chr20:46,428,078...46,519,156
Ensembl chr20:46,428,124...46,519,144
JBrowse link
G Insl3 insulin-like 3 IDA in preovulatory follicles RGD PMID:15123806 RGD:1600181 NCBI chr16:20,120,753...20,122,702
Ensembl chr16:20,121,352...20,122,696
JBrowse link
G Pabpc1l poly(A) binding protein, cytoplasmic 1-like ISO MGI:MGI:5437740 (MGI:MGI:5437387|PMID:22621333), (MGI:MGI:5688228|PMID:26134869) RGD PMID:22621333, PMID:26134869 MGI:MGI:5437387, MGI:MGI:5688228 NCBI chr 3:160,410,733...160,447,073
Ensembl chr 3:160,410,757...160,444,940
JBrowse link
G Pde3a phosphodiesterase 3A TAS
IBA
ISO
IEP
PMID:21873635
(MGI:MGI:2136575|PMID:11420239)
RGD PMID:11420239, PMID:11673261, PMID:21873635, PMID:11673261 MGI:MGI:2136575, RGD:731220, RGD:13792537, RGD:731220 NCBI chr 4:175,431,904...175,703,844
Ensembl chr 4:175,431,904...175,700,238
JBrowse link
G Ptk2b protein tyrosine kinase 2 beta IMP RGD PMID:17127746 RGD:1642612 NCBI chr15:42,827,306...42,947,796
Ensembl chr15:42,827,310...42,947,656
JBrowse link
G Rec8 REC8 meiotic recombination protein ISO MGI:MGI:1916966|MGI:MGI:3512754 (MGI:MGI:3719060|PMID:17696610) RGD PMID:17696610 MGI:MGI:3719060 NCBI chr15:34,296,922...34,304,387
Ensembl chr15:34,296,922...34,304,552
JBrowse link
G Rln1 relaxin 1 ISO (PMID:21272344) RGD PMID:21272344 NCBI chr 1:247,483,298...247,486,331
Ensembl chr 1:247,483,302...247,486,202
JBrowse link
G Rps6ka2 ribosomal protein S6 kinase A2 ISO (MGI:MGI:3521521|PMID:15526037) RGD PMID:15526037 MGI:MGI:3521521 NCBI chr 1:53,219,346...53,499,445
Ensembl chr 1:53,360,157...53,499,445
JBrowse link
G Rxfp2 relaxin family peptide receptor 2 IDA in preovulatory follicles RGD PMID:15123806 RGD:1600181 NCBI chr12:6,016,884...6,078,411
Ensembl chr12:6,016,884...6,078,411
JBrowse link
G Trip13 thyroid hormone receptor interactor 13 ISO MGI:MGI:1929645|MGI:MGI:3719273 (MGI:MGI:3719060|PMID:17696610) RGD PMID:17696610 MGI:MGI:3719060 NCBI chr 1:31,967,980...32,012,923
Ensembl chr 1:31,967,978...32,012,919
JBrowse link
G Tut4 terminal uridylyl transferase 4 ISO (MGI:MGI:6162305|PMID:28792939) RGD PMID:28792939 MGI:MGI:6162305 NCBI chr 5:128,063,880...128,168,726
Ensembl chr 5:128,083,118...128,168,207
JBrowse link
G Tut7 terminal uridylyl transferase 7 ISO (MGI:MGI:6162305|PMID:28792939) RGD PMID:28792939 MGI:MGI:6162305 NCBI chr17:5,225,854...5,279,674
Ensembl chr17:5,225,835...5,271,794
JBrowse link
G Washc1 WASH complex subunit 1 IEA
ISO
GO_REF:0000107
(MGI:MGI:5613746|PMID:24998208)
Ensembl
RGD
PMID:24998208 GO_REF:0000107, MGI:MGI:5613746 NCBI chr 9:113,918,914...113,936,861
Ensembl chr 9:113,918,858...113,936,860
JBrowse link
G Washc5 WASH complex subunit 5 ISO (MGI:MGI:5613746|PMID:24998208) RGD PMID:24998208 MGI:MGI:5613746 NCBI chr 7:99,625,379...99,677,237
Ensembl chr 7:99,625,619...99,677,268
JBrowse link
G Ythdf2 YTH N(6)-methyladenosine RNA binding protein 2 ISO (MGI:MGI:5911735|PMID:28867294) RGD PMID:28867294 MGI:MGI:5911735 NCBI chr 5:150,364,490...150,390,173
Ensembl chr 5:150,365,101...150,390,099
JBrowse link
ovarian cumulus expansion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmpr1b bone morphogenetic protein receptor type 1B ISO (MGI:MGI:2136692|PMID:11416163) RGD PMID:11416163 MGI:MGI:2136692 NCBI chr 2:247,392,195...247,662,026
Ensembl chr 2:247,403,920...247,446,882
JBrowse link
G Ereg epiregulin IDA PMID:15459120 UniProt PMID:15459120 RGD:2316284 NCBI chr14:18,577,620...18,591,395
Ensembl chr14:18,576,355...18,591,394
JBrowse link
G Gdf9 growth differentiation factor 9 ISO (PMID:24313324) RGD PMID:24313324 NCBI chr10:38,782,519...38,793,238
Ensembl chr10:38,788,992...38,792,940
JBrowse link
G Kif20a kinesin family member 20A ISO (PMID:25036038) RGD PMID:25036038 NCBI chr18:27,424,328...27,432,814
Ensembl chr18:27,424,328...27,432,814
JBrowse link
G Ptx3 pentraxin 3 ISO (MGI:MGI:3761906|PMID:17675295) RGD PMID:17675295 MGI:MGI:3761906 NCBI chr 2:158,097,843...158,103,653
Ensembl chr 2:158,097,843...158,103,653
JBrowse link
P granule organization term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pld6 phospholipase D family, member 6 ISO (MGI:MGI:4943609|PMID:21397848) RGD PMID:21397848 MGI:MGI:4943609 NCBI chr10:46,142,313...46,145,774
Ensembl chr10:46,142,801...46,145,548
JBrowse link
G Tdrd5 tudor domain containing 5 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:4946318|PMID:21383078)
Ensembl
UniProt
RGD
PMID:21383078 GO_REF:0000024, GO_REF:0000107, MGI:MGI:4946318 NCBI chr13:73,872,637...73,922,640
Ensembl chr13:73,872,621...73,921,969
JBrowse link
pole plasm assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100911453 methylosome protein 50-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:208,420,223...208,430,276
Ensembl chr 2:208,420,309...208,587,260
Ensembl chr 2:208,420,309...208,587,260
JBrowse link
G Wdr77 WD repeat domain 77 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:208,577,292...208,587,263
Ensembl chr 2:208,420,309...208,587,260
JBrowse link
positive regulation of meiotic cell cycle process involved in oocyte maturation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aurka aurora kinase A ISO (PMID:18614302), (PMID:20662813) RGD PMID:18614302, PMID:20662813 NCBI chr 3:170,364,177...170,380,278
Ensembl chr 3:170,364,181...170,378,210
JBrowse link
G Ccnh cyclin H ISO (PMID:21778139) RGD PMID:21778139 NCBI chr 2:13,593,100...13,613,910
Ensembl chr 2:13,593,100...13,613,910
JBrowse link
G Cdc20 cell division cycle 20 ISO (PMID:18753608) RGD PMID:18753608 NCBI chr 5:137,260,728...137,264,931
Ensembl chr 5:137,260,739...137,265,015
JBrowse link
G Cdk1 cyclin-dependent kinase 1 ISO (PMID:21778139), (PMID:22674394) RGD PMID:21778139, PMID:22674394 NCBI chr20:20,576,341...20,591,510
Ensembl chr20:20,576,377...20,591,549
JBrowse link
G Cdk2 cyclin dependent kinase 2 ISO (PMID:15750306) RGD PMID:15750306 NCBI chr 7:3,124,953...3,132,533
Ensembl chr 7:3,124,954...3,132,457
JBrowse link
G Cdk7 cyclin-dependent kinase 7 ISO (PMID:21778139) RGD PMID:21778139 NCBI chr 2:30,710,642...30,735,522
Ensembl chr 2:30,710,643...30,735,514
JBrowse link
G Cpeb1 cytoplasmic polyadenylation element binding protein 1 ISO (PMID:20662813) RGD PMID:20662813 NCBI chr 1:143,171,457...143,278,485
Ensembl chr 1:143,171,264...143,278,485
JBrowse link
G Mastl microtubule associated serine/threonine kinase-like ISO (PMID:23843240) RGD PMID:23843240 NCBI chr17:89,839,562...89,875,855
Ensembl chr17:89,742,140...89,876,825
JBrowse link
G Prkar2a protein kinase cAMP-dependent type II regulatory subunit alpha ISO (PMID:22674394) RGD PMID:22674394 NCBI chr 8:117,486,085...117,548,768
Ensembl chr 8:117,486,083...117,546,370
JBrowse link
positive regulation of oocyte development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pde3a phosphodiesterase 3A ISO
IBA
MGI:MGI:2651499 (MGI:MGI:4361111|PMID:19474061)
PMID:21873635
RGD PMID:19474061, PMID:21873635 MGI:MGI:4361111, RGD:13792537 NCBI chr 4:175,431,904...175,703,844
Ensembl chr 4:175,431,904...175,700,238
JBrowse link
G Pde5a phosphodiesterase 5A ISO
IEA
MGI:MGI:1860764 (MGI:MGI:4361111|PMID:19474061)
GO_REF:0000107
RGD
Ensembl
PMID:19474061 GO_REF:0000107, MGI:MGI:4361111 NCBI chr 2:226,899,604...227,044,916
Ensembl chr 2:226,900,619...227,041,576
JBrowse link
positive regulation of oocyte maturation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aurka aurora kinase A ISO
IEA
(MGI:MGI:3045818|PMID:14695913)
GO_REF:0000107
RGD
Ensembl
PMID:14695913 GO_REF:0000107, MGI:MGI:3045818 NCBI chr 3:170,364,177...170,380,278
Ensembl chr 3:170,364,181...170,378,210
JBrowse link
G Bnc1 basonuclin 1 ISO (PMID:30010909) RGD PMID:30010909 NCBI chr 1:143,793,280...143,818,748
NCBI chr 1:143,869,440...143,878,077
Ensembl chr 1:143,793,064...143,818,706
JBrowse link
G Gdf9 growth differentiation factor 9 ISO (PMID:24313324) RGD PMID:24313324 NCBI chr10:38,782,519...38,793,238
Ensembl chr10:38,788,992...38,792,940
JBrowse link
G Sirt2 sirtuin 2 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:5567889|PMID:24334550)
Ensembl
UniProt
RGD
PMID:24334550 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5567889 NCBI chr 1:86,948,866...86,971,954
Ensembl chr 1:86,948,918...86,971,952
JBrowse link
preantral ovarian follicle growth term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amh anti-Mullerian hormone IDA RGD PMID:11133686 RGD:2315649 NCBI chr 7:11,775,155...11,777,503
Ensembl chr 7:11,775,155...11,777,503
JBrowse link
G Gpr149 G protein-coupled receptor 149 ISO MGI:MGI:4442841 (MGI:MGI:4438524|PMID:19887567) RGD PMID:19887567 MGI:MGI:4438524 NCBI chr 2:152,838,836...152,912,027
Ensembl chr 2:152,839,117...152,911,553
JBrowse link
G Zfp830 zinc finger protein 830 ISO
ISS
(MGI:MGI:5707559|PMID:25168238)
GO_REF:0000024
RGD
UniProt
PMID:25168238 GO_REF:0000024, MGI:MGI:5707559 NCBI chr10:70,118,250...70,119,714
Ensembl chr10:70,118,250...70,119,716
JBrowse link
primary follicle stage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ereg epiregulin IDA PMID:15459120 UniProt PMID:15459120 RGD:2316284 NCBI chr14:18,577,620...18,591,395
Ensembl chr14:18,576,355...18,591,394
JBrowse link
G Ythdc1 YTH domain containing 1 ISO MGI:MGI:2176187|MGI:MGI:3757577|MGI:MGI:6194732 (MGI:MGI:6161521|PMID:29799838) RGD PMID:29799838 MGI:MGI:6161521 NCBI chr14:22,971,834...23,002,326
Ensembl chr14:22,971,836...23,002,011
JBrowse link
regulation of meiotic cell cycle process involved in oocyte maturation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap5 A-kinase anchoring protein 5 ISO (PMID:24501172) RGD PMID:24501172 NCBI chr 6:99,356,509...99,361,909
Ensembl chr 6:99,356,509...99,361,909
JBrowse link
G Ppp2r1a protein phosphatase 2 scaffold subunit A alpha ISO MGI:MGI:5287252 (MGI:MGI:5586612|PMID:24899574) RGD PMID:24899574 MGI:MGI:5586612 NCBI chr 1:60,717,386...60,736,629
Ensembl chr 1:60,717,386...60,736,609
JBrowse link
G Prkar1a protein kinase cAMP-dependent type I regulatory subunit alpha ISO (PMID:24501172) RGD PMID:24501172 NCBI chr10:97,940,705...97,959,199
Ensembl chr10:97,940,705...97,957,336
JBrowse link
G Prkar2a protein kinase cAMP-dependent type II regulatory subunit alpha ISO (PMID:24501172) RGD PMID:24501172 NCBI chr 8:117,486,085...117,548,768
Ensembl chr 8:117,486,083...117,546,370
JBrowse link
G Ythdf2 YTH N(6)-methyladenosine RNA binding protein 2 ISO (MGI:MGI:5911735|PMID:28867294) RGD PMID:28867294 MGI:MGI:5911735 NCBI chr 5:150,364,490...150,390,173
Ensembl chr 5:150,365,101...150,390,099
JBrowse link
vitelline membrane formation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ihh Indian hedgehog signaling molecule ISO MGI:MGI:1934258 (MGI:MGI:3766861|PMID:17881493) RGD PMID:17881493 MGI:MGI:3766861 NCBI chr 9:82,208,223...82,214,440
Ensembl chr 9:82,208,223...82,214,440
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20014
    cellular process 18788
      cellular process involved in reproduction in multicellular organism 456
        germ cell development 339
          oogenesis 111
            egg coat formation + 2
            eggshell formation + 0
            female germ-line cyst formation + 0
            female germ-line stem cell asymmetric division 0
            germarium-derived egg chamber formation + 0
            growth of a germarium-derived egg chamber + 0
            mammalian oogenesis stage + 11
            negative regulation of oogenesis + 11
            nurse cell apoptotic process + 0
            oocyte differentiation + 74
            oocyte karyosome formation 0
            ovarian follicle cell development + 0
            ovarian nurse cell to oocyte transport + 0
            positive regulation of oogenesis + 14
            regulation of oogenesis + 29
Path 2
Term Annotations click to browse term
  biological_process 20014
    reproduction 1788
      reproductive process 1785
        multi-organism reproductive process 1238
          sexual reproduction 982
            gamete generation 811
              female gamete generation 177
                oogenesis 111
                  egg coat formation + 2
                  eggshell formation + 0
                  female germ-line cyst formation + 0
                  female germ-line stem cell asymmetric division 0
                  germarium-derived egg chamber formation + 0
                  growth of a germarium-derived egg chamber + 0
                  mammalian oogenesis stage + 11
                  negative regulation of oogenesis + 11
                  nurse cell apoptotic process + 0
                  oocyte differentiation + 74
                  oocyte karyosome formation 0
                  ovarian follicle cell development + 0
                  ovarian nurse cell to oocyte transport + 0
                  positive regulation of oogenesis + 14
                  regulation of oogenesis + 29
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.