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ONTOLOGY REPORT - ANNOTATIONS


Term:oogenesis
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Accession:GO:0048477 term browser browse the term
Definition:The complete process of formation and maturation of an ovum or female gamete from a primordial female germ cell. Examples of this process are found in Mus musculus and Drosophila melanogaster.
Synonyms:exact_synonym: ovum development
 alt_id: GO:0009993;   GO:0048157
 xref: Wikipedia:Oogenesis
 only_in_taxon: NCBITaxon:33208 ! Metazoa


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oogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adrm1 adhesion regulating molecule 1 JBrowse link 3 175,548,181 175,552,943 RGD:1624291
G Aspm abnormal spindle microtubule assembly JBrowse link 13 56,546,021 56,591,793 RGD:1624291
RGD:1600115
G Ccdc155 coiled-coil domain containing 155 JBrowse link 1 101,180,497 101,203,048 RGD:1624291
RGD:1600115
G Ccdc36 coiled-coil domain containing 36 JBrowse link 8 117,182,484 117,215,390 RGD:1624291
G Ddx20 DEAD-box helicase 20 JBrowse link 2 208,144,142 208,154,764 RGD:1624291
RGD:1600115
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit JBrowse link 1 80,256,973 80,268,198 RGD:1624291
RGD:1600115
G Fmn2 formin 2 JBrowse link 13 92,569,256 92,887,302 RGD:1624291
G H3f3a H3 histone family member 3A JBrowse link 13 99,091,246 99,102,828 RGD:1624291
RGD:1600115
G H3f3b H3 histone family member 3B JBrowse link 10 104,573,666 104,575,890 RGD:1624291
RGD:1600115
G Hexb hexosaminidase subunit beta JBrowse link 2 27,983,925 28,003,260 RGD:1624291
RGD:1600115
G Hormad1 HORMA domain containing 1 JBrowse link 2 197,681,820 197,720,197 RGD:1600115
RGD:1624291
G Kmt2d lysine methyltransferase 2D JBrowse link 7 140,507,137 140,542,479 RGD:1624291
G LOC103689943 meiosis arrest female protein 1-like JBrowse link 10 28,267 72,912 RGD:1624291
G Marf1 meiosis regulator and mRNA stability factor 1 JBrowse link 10 908,806 953,481 RGD:1600115
RGD:1624291
G Mcmdc2 minichromosome maintenance domain containing 2 JBrowse link 5 8,973,861 9,039,616 RGD:1624291
RGD:1600115
G Mdk midkine JBrowse link 3 80,841,003 80,843,895 RGD:1600115
RGD:1624291
G Mei4 meiotic double-stranded break formation protein 4 JBrowse link 8 89,369,417 89,556,942 RGD:1624291
RGD:13792537
G Mlh1 mutL homolog 1 JBrowse link 8 119,486,655 119,523,716 RGD:1624291
RGD:1600115
G Nanos3 nanos C2HC-type zinc finger 3 JBrowse link 19 25,284,907 25,288,680 RGD:1624291
RGD:1600115
G Piwil2 piwi-like RNA-mediated gene silencing 2 JBrowse link 15 52,037,693 52,116,277 RGD:1624291
RGD:1600115
G Ptn pleiotrophin JBrowse link 4 64,239,156 64,330,996 RGD:1600115
RGD:1624291
G Sebox SEBOX homeobox JBrowse link 10 65,771,370 65,774,748 RGD:1624291
RGD:1600115
G Six6os1 Six6 opposite strand transcript 1 JBrowse link 6 95,761,718 95,797,314 RGD:1624291
RGD:13792537
G Sohlh1 spermatogenesis and oogenesis specific basic helix-loop-helix 1 JBrowse link 3 3,290,766 3,295,226 RGD:1624291
G Spo11 SPO11, initiator of meiotic double stranded breaks JBrowse link 3 170,991,573 171,008,226 RGD:1624291
RGD:1600115
G Src SRC proto-oncogene, non-receptor tyrosine kinase JBrowse link 3 153,547,807 153,595,643 RGD:1624291
RGD:1600115
G Trip13 thyroid hormone receptor interactor 13 JBrowse link 1 31,967,980 32,012,923 RGD:1624291
RGD:1600115
G Ybx2 Y box binding protein 2 JBrowse link 10 56,546,689 56,552,339 RGD:1624291
egg coat formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Zp3 zona pellucida glycoprotein 3 JBrowse link 12 23,735,225 23,752,734 RGD:1600115
RGD:13792537
RGD:1624291
mammalian oogenesis stage term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rps6 ribosomal protein S6 JBrowse link 5 105,197,821 105,200,681 RGD:1624291
meiotic cell cycle process involved in oocyte maturation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cdk1 cyclin-dependent kinase 1 JBrowse link 20 20,576,341 20,591,510 RGD:1624291
G Kif20a kinesin family member 20A JBrowse link 18 27,424,328 27,432,814 RGD:1624291
negative regulation of meiotic cell cycle process involved in oocyte maturation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccnb1 cyclin B1 JBrowse link 2 30,782,133 30,791,106 RGD:1624291
G Ccnb2 cyclin B2 JBrowse link 8 76,847,972 76,861,165 RGD:1624291
G Fzr1 fizzy and cell division cycle 20 related 1 JBrowse link 7 11,201,690 11,213,614 RGD:1624291
G Gpr3 G protein-coupled receptor 3 JBrowse link 5 151,394,118 151,397,634 RGD:1624291
G Grb14 growth factor receptor bound protein 14 JBrowse link 3 50,937,403 51,054,447 RGD:12793049
G Prkaca protein kinase cAMP-activated catalytic subunit alpha JBrowse link 19 25,095,089 25,118,869 RGD:1624291
G Wee2 WEE1 homolog 2 JBrowse link 4 68,604,770 68,631,341 RGD:1624291
negative regulation of oocyte development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Igf1 insulin-like growth factor 1 JBrowse link 7 28,412,123 28,491,815 RGD:1624291
RGD:1600115
G Wee2 WEE1 homolog 2 JBrowse link 4 68,604,770 68,631,341 RGD:1624291
negative regulation of oocyte maturation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gpr3 G protein-coupled receptor 3 JBrowse link 5 151,394,118 151,397,634 RGD:1624291
G Nppc natriuretic peptide C JBrowse link 9 93,731,436 93,735,636 RGD:1624291
RGD:1600115
G Npr2 natriuretic peptide receptor 2 JBrowse link 5 59,128,186 59,147,321 RGD:1624291
RGD:1600115
G Shb SH2 domain containing adaptor protein B JBrowse link 5 60,970,650 61,077,881 RGD:1624291
RGD:1600115
G Wee2 WEE1 homolog 2 JBrowse link 4 68,604,770 68,631,341 RGD:1624291
RGD:1600115
oocyte development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atm ATM serine/threonine kinase JBrowse link 8 58,015,938 58,119,973 RGD:1624291
RGD:1600115
G Aurkc aurora kinase C JBrowse link 1 69,958,452 69,964,546 RGD:1600115
G Bcl2 BCL2, apoptosis regulator JBrowse link 13 26,605,426 26,769,374 RGD:1624291
RGD:1600115
G Ctnnb1 catenin beta 1 JBrowse link 8 129,601,511 129,628,378 RGD:1624291
RGD:1600115
G Dmrt1 doublesex and mab-3 related transcription factor 1 JBrowse link 1 243,477,403 243,582,629 RGD:1624291
RGD:13792537
G Inhbb inhibin subunit beta B JBrowse link 13 35,436,532 35,442,222 RGD:1624291
RGD:1600115
G Meioc meiosis specific with coiled-coil domain JBrowse link 10 90,622,954 90,641,883 RGD:1624291
RGD:1600115
G Wnt4 Wnt family member 4 JBrowse link 5 155,649,238 155,668,065 RGD:1600115
RGD:1624291
G Ybx2 Y box binding protein 2 JBrowse link 10 56,546,689 56,552,339 RGD:2311249
G Ythdc2 YTH domain containing 2 JBrowse link 1 182,072,386 182,141,399 RGD:1600115
RGD:1624291
G Zfx zinc finger protein X-linked JBrowse link X 63,158,368 63,204,971 RGD:1624291
RGD:1600115
G Zglp1 zinc finger, GATA-like protein 1 JBrowse link 8 22,081,439 22,086,446 RGD:1624291
RGD:1600115
G Zp3 zona pellucida glycoprotein 3 JBrowse link 12 23,735,225 23,752,734 RGD:1600115
RGD:1624291
oocyte differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Kmt2b lysine methyltransferase 2B JBrowse link 1 89,022,889 89,042,176 RGD:1624291
RGD:1600115
G Lgr5 leucine rich repeat containing G protein coupled receptor 5 JBrowse link 7 58,447,097 58,587,787 RGD:1624291
RGD:1600115
G Npm2 nucleophosmin/nucleoplasmin 2 JBrowse link 15 52,337,457 52,345,849 RGD:1624291
RGD:1600115
G Sohlh1 spermatogenesis and oogenesis specific basic helix-loop-helix 1 JBrowse link 3 3,290,766 3,295,226 RGD:1600115
RGD:1624291
G Sohlh2 spermatogenesis and oogenesis specific basic helix-loop-helix 2 JBrowse link 2 144,591,755 144,614,065 RGD:1624291
RGD:1600115
oocyte growth term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Foxl2 forkhead box L2 JBrowse link 8 107,194,492 107,197,644 RGD:1600115
G Gdf9 growth differentiation factor 9 JBrowse link 10 38,782,519 38,793,238 RGD:1624291
RGD:1600115
G Kmt2d lysine methyltransferase 2D JBrowse link 7 140,507,137 140,542,479 RGD:1624291
oocyte maturation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Brca2 BRCA2, DNA repair associated JBrowse link 12 503,660 544,754 RGD:1624291
RGD:1600115
G Ccnb1 cyclin B1 JBrowse link 2 30,782,133 30,791,106 RGD:1578405
G Cdc25b cell division cycle 25B JBrowse link 3 123,731,539 123,741,696 RGD:1624291
RGD:1600115
G Dazl deleted in azoospermia-like JBrowse link 9 12,633,983 12,651,017 RGD:1624291
RGD:1600115
G Dmc1 DNA meiotic recombinase 1 JBrowse link 7 120,796,217 120,840,524 RGD:1624291
RGD:1600115
G Ereg epiregulin JBrowse link 14 18,577,620 18,591,395 RGD:2316284
G Fbxo5 F-box protein 5 JBrowse link 1 42,461,277 42,467,646 RGD:1624291
RGD:1600115
G Foxo3 forkhead box O3 JBrowse link 20 46,428,078 46,519,156 RGD:1624291
RGD:1600115
G Insl3 insulin-like 3 JBrowse link 16 20,120,753 20,122,702 RGD:1600181
G Pabpc1l poly(A) binding protein, cytoplasmic 1-like JBrowse link 3 160,410,733 160,447,073 RGD:1624291
RGD:1600115
G Pde3a phosphodiesterase 3A JBrowse link 4 175,431,904 175,703,844 RGD:731220
RGD:13792537
RGD:1624291
G Ptk2b protein tyrosine kinase 2 beta JBrowse link 15 42,827,306 42,947,796 RGD:1642612
G Rec8 REC8 meiotic recombination protein JBrowse link 15 34,296,922 34,304,387 RGD:1624291
RGD:1600115
G Rln1 relaxin 1 JBrowse link 1 247,483,298 247,486,331 RGD:1624291
G Rps6ka2 ribosomal protein S6 kinase A2 JBrowse link 1 53,219,346 53,499,445 RGD:1624291
RGD:1600115
G Rxfp2 relaxin family peptide receptor 2 JBrowse link 12 6,016,884 6,078,411 RGD:1600181
G Trip13 thyroid hormone receptor interactor 13 JBrowse link 1 31,967,980 32,012,923 RGD:1624291
RGD:1600115
G Tut4 terminal uridylyl transferase 4 JBrowse link 5 128,063,880 128,168,726 RGD:1600115
RGD:1624291
G Tut7 terminal uridylyl transferase 7 JBrowse link 17 5,225,854 5,279,674 RGD:1624291
G Washc1 WASH complex subunit 1 JBrowse link 9 113,918,914 113,936,861 RGD:1600115
RGD:1624291
G Washc5 WASH complex subunit 5 JBrowse link 7 99,625,379 99,677,237 RGD:1624291
RGD:1600115
G Ythdf2 YTH N(6)-methyladenosine RNA binding protein 2 JBrowse link 5 150,364,490 150,390,173 RGD:1624291
RGD:1600115
ovarian cumulus expansion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bmpr1b bone morphogenetic protein receptor type 1B JBrowse link 2 247,392,195 247,662,026 RGD:1624291
RGD:1600115
G Ereg epiregulin JBrowse link 14 18,577,620 18,591,395 RGD:2316284
G Gdf9 growth differentiation factor 9 JBrowse link 10 38,782,519 38,793,238 RGD:1624291
G Kif20a kinesin family member 20A JBrowse link 18 27,424,328 27,432,814 RGD:1624291
G Ptx3 pentraxin 3 JBrowse link 2 158,097,843 158,103,653 RGD:1624291
RGD:1600115
P granule organization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pld6 phospholipase D family, member 6 JBrowse link 10 46,142,313 46,145,774 RGD:1624291
RGD:1600115
G Tdrd5 tudor domain containing 5 JBrowse link 13 73,872,637 73,922,640 RGD:1600115
RGD:1624291
positive regulation of meiotic cell cycle process involved in oocyte maturation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aurka aurora kinase A JBrowse link 3 170,364,177 170,380,278 RGD:1624291
G Ccnh cyclin H JBrowse link 2 13,593,100 13,613,910 RGD:1624291
G Cdc20 cell division cycle 20 JBrowse link 5 137,260,728 137,264,931 RGD:1624291
G Cdk1 cyclin-dependent kinase 1 JBrowse link 20 20,576,341 20,591,510 RGD:1624291
G Cdk7 cyclin-dependent kinase 7 JBrowse link 2 30,710,642 30,735,522 RGD:1624291
G Prkar2a protein kinase cAMP-dependent type II regulatory subunit alpha JBrowse link 8 117,486,085 117,548,768 RGD:1624291
positive regulation of oocyte development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pde3a phosphodiesterase 3A JBrowse link 4 175,431,904 175,703,844 RGD:1624291
RGD:13792537
G Pde5a phosphodiesterase 5A JBrowse link 2 226,899,604 227,044,916 RGD:1624291
RGD:1600115
positive regulation of oocyte maturation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aurka aurora kinase A JBrowse link 3 170,364,177 170,380,278 RGD:1624291
RGD:1600115
G Gdf9 growth differentiation factor 9 JBrowse link 10 38,782,519 38,793,238 RGD:1624291
G Sirt2 sirtuin 2 JBrowse link 1 86,948,866 86,971,954 RGD:1600115
RGD:1624291
preantral ovarian follicle growth term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Amh anti-Mullerian hormone JBrowse link 7 11,775,155 11,777,503 RGD:2315649
G Gpr149 G protein-coupled receptor 149 JBrowse link 2 152,838,836 152,912,027 RGD:1624291
RGD:1600115
G Zfp830 zinc finger protein 830 JBrowse link 10 70,118,250 70,119,714 RGD:1624291
RGD:1600115
primary follicle stage term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ereg epiregulin JBrowse link 14 18,577,620 18,591,395 RGD:2316284
G Ythdc1 YTH domain containing 1 JBrowse link 14 22,971,834 23,002,326 RGD:1600115
RGD:1624291
regulation of meiotic cell cycle process involved in oocyte maturation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Akap5 A-kinase anchoring protein 5 JBrowse link 6 99,356,509 99,361,909 RGD:1624291
G Ppp2r1a protein phosphatase 2 scaffold subunit A alpha JBrowse link 1 60,717,386 60,736,629 RGD:1624291
RGD:1600115
G Prkar1a protein kinase cAMP-dependent type I regulatory subunit alpha JBrowse link 10 97,940,705 97,959,199 RGD:1624291
G Prkar2a protein kinase cAMP-dependent type II regulatory subunit alpha JBrowse link 8 117,486,085 117,548,768 RGD:1624291
G Ythdf2 YTH N(6)-methyladenosine RNA binding protein 2 JBrowse link 5 150,364,490 150,390,173 RGD:1624291
RGD:1600115
vitelline membrane formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ihh Indian hedgehog signaling molecule JBrowse link 9 82,208,223 82,214,440 RGD:1624291
RGD:1600115

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18008
    cellular process 16139
      cellular process involved in reproduction in multicellular organism 414
        germ cell development 310
          oogenesis 99
            egg coat formation + 2
            eggshell formation + 0
            female germ-line cyst formation + 0
            female germ-line stem cell asymmetric division 0
            germarium-derived egg chamber formation + 0
            growth of a germarium-derived egg chamber + 0
            mammalian oogenesis stage + 10
            negative regulation of oogenesis + 11
            nurse cell apoptotic process + 0
            oocyte differentiation + 67
            oocyte karyosome formation 0
            ovarian follicle cell development + 0
            ovarian nurse cell to oocyte transport + 0
            positive regulation of oogenesis + 10
            regulation of oogenesis + 25
Path 2
Term Annotations click to browse term
  biological_process 18008
    reproduction 1673
      reproductive process 1670
        multi-organism reproductive process 1157
          sexual reproduction 908
            gamete generation 748
              female gamete generation 161
                oogenesis 99
                  egg coat formation + 2
                  eggshell formation + 0
                  female germ-line cyst formation + 0
                  female germ-line stem cell asymmetric division 0
                  germarium-derived egg chamber formation + 0
                  growth of a germarium-derived egg chamber + 0
                  mammalian oogenesis stage + 10
                  negative regulation of oogenesis + 11
                  nurse cell apoptotic process + 0
                  oocyte differentiation + 67
                  oocyte karyosome formation 0
                  ovarian follicle cell development + 0
                  ovarian nurse cell to oocyte transport + 0
                  positive regulation of oogenesis + 10
                  regulation of oogenesis + 25
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.