ONTOLOGY REPORT - ANNOTATIONS


Term:oogenesis
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Accession:GO:0048477 term browser browse the term
Definition:The complete process of formation and maturation of an ovum or female gamete from a primordial female germ cell. Examples of this process are found in Mus musculus and Drosophila melanogaster.
Synonyms:exact_synonym: ovum development
 alt_id: GO:0009993;   GO:0048157
 xref: Wikipedia:Oogenesis
 only_in_taxon: NCBITaxon:33208 ! Metazoa


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oogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ASPM abnormal spindle microtubule assembly JBrowse link 1 176,988,297 177,050,810 RGD:9068941
G C14H14orf39 chromosome 14 C14orf39 homolog JBrowse link 14 59,303,152 59,352,973 RGD:9068941
G CCDC155 coiled-coil domain containing 155 JBrowse link 19 55,325,640 55,353,721 RGD:9068941
G CCDC36 coiled-coil domain containing 36 JBrowse link 3 50,217,333 50,260,487 RGD:9068941
G DDX20 DEAD-box helicase 20 JBrowse link 1 125,918,392 125,929,961 RGD:9068941
G DIAPH2 diaphanous related formin 2 JBrowse link X 96,067,252 96,979,830 RGD:9068941
G ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit JBrowse link 19 50,951,674 50,994,600 RGD:9068941
G FMN2 formin 2 JBrowse link 1 220,621,414 221,008,892 RGD:9068941
G HEXB hexosaminidase subunit beta JBrowse link 5 41,199,681 41,232,693 RGD:9068941
G HORMAD1 HORMA domain containing 1 JBrowse link 1 129,704,287 129,726,691 RGD:9068941
G KMT2D lysine methyltransferase 2D JBrowse link 12 40,570,152 40,611,463 RGD:9068941
G LOC100970414 histone H3.3 JBrowse link 1 206,520,107 206,529,447 RGD:9068941
G LOC100988671 histone H3.3 JBrowse link 17 75,277,614 75,281,106 RGD:9068941
G LOC106633912 pachytene checkpoint protein 2 homolog JBrowse link 16 52,638,786 52,640,515 RGD:9068941
G MARF1 meiosis regulator and mRNA stability factor 1 JBrowse link 16 15,899,788 15,948,774 RGD:9068941
G MCMDC2 minichromosome maintenance domain containing 2 JBrowse link 8 65,079,264 65,128,147 RGD:9068941
G MDK midkine JBrowse link 11 46,890,151 46,893,318 RGD:9068941
G MEI4 meiotic double-stranded break formation protein 4 JBrowse link 6 78,782,019 79,049,409 RGD:9068941
G MLH1 mutL homolog 1 JBrowse link 3 37,189,439 37,245,801 RGD:9068941
G NANOS3 nanos C2HC-type zinc finger 3 JBrowse link 19 14,170,500 14,173,267 RGD:9068941
G NOBOX NOBOX oogenesis homeobox JBrowse link 7 148,599,693 148,612,657 RGD:9068941
G PAQR5 progestin and adipoQ receptor family member 5 JBrowse link 15 67,021,821 67,127,773 RGD:9068941
G PAQR7 progestin and adipoQ receptor family member 7 JBrowse link 1 26,187,526 26,195,835 RGD:9068941
G PAQR8 progestin and adipoQ receptor family member 8 JBrowse link 6 53,222,169 53,227,108 RGD:9068941
G PIWIL2 piwi like RNA-mediated gene silencing 2 JBrowse link 8 18,459,052 18,546,688 RGD:9068941
G PTN pleiotrophin JBrowse link 7 141,678,056 141,794,565 RGD:9068941
G SEBOX SEBOX homeobox JBrowse link 17 28,911,695 28,912,596 RGD:9068941
G SPO11 SPO11 initiator of meiotic double stranded breaks JBrowse link 20 54,948,664 54,962,908 RGD:9068941
G SRC SRC proto-oncogene, non-receptor tyrosine kinase JBrowse link 20 34,822,287 34,841,523 RGD:9068941
G STRA8 stimulated by retinoic acid 8 JBrowse link 7 139,700,812 139,726,154 RGD:9068941
G TAF4B TATA-box binding protein associated factor 4b JBrowse link 18 23,089,239 23,254,247 RGD:9068941
mammalian oogenesis stage term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LOC100972194 40S ribosomal protein S6 JBrowse link 9 19,674,380 19,678,397 RGD:9068941
negative regulation of oocyte development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G IGF1 insulin like growth factor 1 JBrowse link 12 103,385,911 103,463,264 RGD:9068941
negative regulation of oocyte maturation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G NPPC natriuretic peptide C JBrowse link 2B 237,936,938 237,941,244 RGD:9068941
G NPR2 natriuretic peptide receptor 2 JBrowse link 9 36,445,576 36,462,637 RGD:9068941
G WEE2 WEE1 homolog 2 JBrowse link 7 146,110,121 146,132,872 RGD:9068941
oocyte development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ATM ATM serine/threonine kinase JBrowse link 11 106,584,228 106,728,457 RGD:9068941
G AURKC aurora kinase C JBrowse link 19 63,080,977 63,086,030 RGD:9068941
G BCL2 BCL2 apoptosis regulator JBrowse link 18 59,797,184 59,993,298 RGD:9068941
G CTNNB1 catenin beta 1 JBrowse link 3 41,372,368 41,414,030 RGD:9068941
G DMRT1 doublesex and mab-3 related transcription factor 1 JBrowse link 9 844,366 972,656 RGD:9068941
G FIGLA folliculogenesis specific bHLH transcription factor JBrowse link 2A 71,954,067 71,967,290 RGD:9068941
G INHBB inhibin subunit beta B JBrowse link 2B 120,857,849 120,860,564 RGD:9068941
G MEIOC meiosis specific with coiled-coil domain JBrowse link 17 12,900,285 12,920,505 RGD:9068941
G WNT4 Wnt family member 4 JBrowse link 1 22,252,344 22,264,858 RGD:9068941
G YBX2 Y-box binding protein 2 JBrowse link 17 7,306,548 7,312,632 RGD:9068941
G YTHDC2 YTH domain containing 2 JBrowse link 5 114,672,807 114,754,153 RGD:9068941
G ZGLP1 zinc finger GATA like protein 1 JBrowse link 19 10,520,072 10,524,784 RGD:9068941
oocyte differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G KMT2B lysine methyltransferase 2B JBrowse link 19 41,382,457 41,403,016 RGD:9068941
G LGR5 leucine rich repeat containing G protein-coupled receptor 5 JBrowse link 12 71,823,622 71,969,712 RGD:9068941
G NPM2 nucleophosmin/nucleoplasmin 2 JBrowse link 8 18,208,934 18,221,577 RGD:9068941
G SOHLH1 spermatogenesis and oogenesis specific basic helix-loop-helix 1 JBrowse link 9 135,755,100 135,768,736 RGD:9068941
G SOHLH2 spermatogenesis and oogenesis specific basic helix-loop-helix 2 JBrowse link 13 35,811,256 35,857,611 RGD:9068941
oocyte growth term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G FOXL2 forkhead box L2 JBrowse link 3 143,578,194 143,580,291 RGD:9068941
G GDF9 growth differentiation factor 9 JBrowse link 5 134,437,497 134,442,706 RGD:9068941
G KMT2D lysine methyltransferase 2D JBrowse link 12 40,570,152 40,611,463 RGD:9068941
oocyte maturation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ANG angiogenin JBrowse link 14 19,605,854 19,615,571 RGD:9068941
G BRCA2 BRCA2 DNA repair associated JBrowse link 13 32,009,039 32,092,463 RGD:9068941
G CCNB1 cyclin B1 JBrowse link 5 46,394,362 46,405,332 RGD:9068941
G CDC25B cell division cycle 25B JBrowse link 20 3,626,097 3,645,179 RGD:9068941
G DAZL deleted in azoospermia like JBrowse link 3 16,851,158 16,963,004 RGD:9068941
G DMC1 DNA meiotic recombinase 1 JBrowse link 22 37,253,609 37,305,769 RGD:9068941
G EREG epiregulin JBrowse link 4 55,641,014 55,660,568 RGD:9068941
G FBXO5 F-box protein 5 JBrowse link 6 155,481,767 155,494,689 RGD:9068941
G FOXO3 forkhead box O3 JBrowse link 6 110,406,265 110,536,967 RGD:9068941
G LOC106633912 pachytene checkpoint protein 2 homolog JBrowse link 16 52,638,786 52,640,515 RGD:9068941
G PABPC1L poly(A) binding protein cytoplasmic 1 like JBrowse link 20 42,333,592 42,362,510 RGD:9068941
G PDE3A phosphodiesterase 3A JBrowse link 12 20,763,999 21,068,229 RGD:9068941
G PTK2B protein tyrosine kinase 2 beta JBrowse link 8 23,783,624 23,932,472 RGD:9068941
G REC8 REC8 meiotic recombination protein JBrowse link 14 23,071,724 23,079,964 RGD:9068941
G RPS6KA2 ribosomal protein S6 kinase A2 JBrowse link 6 169,355,114 169,806,718 RGD:9068941
G RXFP2 relaxin family peptide receptor 2 JBrowse link 13 31,434,308 31,497,203 RGD:9068941
G TUBB8 tubulin beta 8 class VIII JBrowse link 10 140,033 142,500 RGD:9068941
G TUT4 terminal uridylyl transferase 4 JBrowse link 1 53,292,477 53,422,893 RGD:9068941
G TUT7 terminal uridylyl transferase 7 JBrowse link 9 85,489,974 85,554,745 RGD:9068941
G WASHC5 WASH complex subunit 5 JBrowse link 8 124,461,424 124,529,262 RGD:9068941
G YTHDF2 YTH N6-methyladenosine RNA binding protein 2 JBrowse link 1 29,038,751 29,070,533 RGD:9068941
ovarian cumulus expansion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BMPR1B bone morphogenetic protein receptor type 1B JBrowse link 4 97,912,541 98,194,890 RGD:9068941
G EREG epiregulin JBrowse link 4 55,641,014 55,660,568 RGD:9068941
G PTX3 pentraxin 3 JBrowse link 3 162,537,440 162,544,263 RGD:9068941
P granule organization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G PLD6 phospholipase D family member 6 JBrowse link 17 39,016,859 39,023,398 RGD:9068941
G TDRD5 tudor domain containing 5 JBrowse link 1 158,761,004 158,852,660 RGD:9068941
positive regulation of oocyte development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G PDE3A phosphodiesterase 3A JBrowse link 12 20,763,999 21,068,229 RGD:9068941
G PDE5A phosphodiesterase 5A JBrowse link 4 122,832,175 122,966,636 RGD:9068941
positive regulation of oocyte maturation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AURKA aurora kinase A JBrowse link 20 53,994,880 54,017,381 RGD:9068941
G SIRT2 sirtuin 2 JBrowse link 19 44,533,965 44,554,838 RGD:9068941
preantral ovarian follicle growth term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AMH anti-Mullerian hormone JBrowse link 19 2,231,984 2,236,130 RGD:9068941
G GPR149 G protein-coupled receptor 149 JBrowse link 3 158,946,398 159,045,996 RGD:9068941
G ZNF830 zinc finger protein 830 JBrowse link 17 22,115,803 22,117,467 RGD:9068941
primary follicle stage term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G EREG epiregulin JBrowse link 4 55,641,014 55,660,568 RGD:9068941
regulation of meiotic cell cycle process involved in oocyte maturation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G PPP2R1A protein phosphatase 2 scaffold subunit Aalpha JBrowse link 19 58,011,383 58,047,577 RGD:9068941
G YTHDF2 YTH N6-methyladenosine RNA binding protein 2 JBrowse link 1 29,038,751 29,070,533 RGD:9068941
vitelline membrane formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G IHH Indian hedgehog signaling molecule JBrowse link 2B 224,905,488 224,917,887 RGD:9068941

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15699
    cellular process 14381
      cellular process involved in reproduction in multicellular organism 340
        germ cell development 248
          oogenesis 87
            egg coat formation + 1
            eggshell formation + 0
            female germ-line cyst formation + 0
            female germ-line stem cell asymmetric division 0
            germarium-derived egg chamber formation + 0
            growth of a germarium-derived egg chamber + 0
            mammalian oogenesis stage + 7
            negative regulation of oogenesis + 4
            nurse cell apoptotic process + 0
            oocyte differentiation + 51
            oocyte karyosome formation 0
            ovarian follicle cell development + 0
            ovarian nurse cell to oocyte transport + 0
            positive regulation of oogenesis + 4
            regulation of oogenesis + 10
Path 2
Term Annotations click to browse term
  biological_process 15699
    reproduction 1374
      reproductive process 1371
        multi-organism reproductive process 938
          sexual reproduction 781
            gamete generation 635
              female gamete generation 135
                oogenesis 87
                  egg coat formation + 1
                  eggshell formation + 0
                  female germ-line cyst formation + 0
                  female germ-line stem cell asymmetric division 0
                  germarium-derived egg chamber formation + 0
                  growth of a germarium-derived egg chamber + 0
                  mammalian oogenesis stage + 7
                  negative regulation of oogenesis + 4
                  nurse cell apoptotic process + 0
                  oocyte differentiation + 51
                  oocyte karyosome formation 0
                  ovarian follicle cell development + 0
                  ovarian nurse cell to oocyte transport + 0
                  positive regulation of oogenesis + 4
                  regulation of oogenesis + 10
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.