ONTOLOGY REPORT - ANNOTATIONS


Term:oogenesis
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Accession:GO:0048477 term browser browse the term
Definition:The complete process of formation and maturation of an ovum or female gamete from a primordial female germ cell. Examples of this process are found in Mus musculus and Drosophila melanogaster.
Synonyms:exact_synonym: ovum development
 alt_id: GO:0009993;   GO:0048157
 xref: Wikipedia:Oogenesis
 only_in_taxon: NCBITaxon:33208 ! Metazoa


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oogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aspm abnormal spindle microtubule assembly JBrowse link NW_004955406 33,665,675 33,720,468 RGD:9068941
G Ccdc155 coiled-coil domain containing 155 JBrowse link NW_004955559 1,416,844 1,438,451 RGD:9068941
G Ccdc36 coiled-coil domain containing 36 JBrowse link NW_004955532 1,198,316 1,226,875 RGD:9068941
G CUNH14orf39 chromosome unknown C14orf39 homolog JBrowse link NW_004955466 9,158,022 9,194,088 RGD:9068941
G Ddx20 DEAD-box helicase 20 JBrowse link NW_004955435 15,209,640 15,219,698 RGD:9068941
G Diaph2 diaphanous related formin 2 JBrowse link NW_004955503 2,324,934 3,132,466 RGD:9068941
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit JBrowse link NW_004955555 2,393,510 2,430,180 RGD:9068941
G Fmn2 formin 2 JBrowse link NW_004955406 11,358,585 11,666,102 RGD:9068941
G H3f3a H3 histone, family 3A JBrowse link NW_004955489 269,900 278,398 RGD:9068941
G H3f3b H3 histone, family 3B JBrowse link NW_004955506 6,475,336 6,478,781 RGD:9068941
G Hexb hexosaminidase subunit beta JBrowse link NW_004955425 25,942,341 25,961,312 RGD:9068941
G Hormad1 HORMA domain containing 1 JBrowse link NW_004955413 130,214 155,381 RGD:9068941
G Kmt2d lysine methyltransferase 2D JBrowse link NW_004955500 7,850,782 7,891,703 RGD:9068941
G Marf1 meiosis regulator and mRNA stability factor 1 JBrowse link NW_004955442 442,512 490,784 RGD:9068941
G Mcmdc2 minichromosome maintenance domain containing 2 JBrowse link NW_004955444 12,348,537 12,382,769 RGD:9068941
G Mdk midkine JBrowse link NW_004955422 1,655,351 1,657,026 RGD:9068941
G Mei4 meiotic double-stranded break formation protein 4 JBrowse link NW_004955502 5,835,608 6,017,945 RGD:9068941
G Mlh1 mutL homolog 1 JBrowse link NW_004955421 3,890,291 3,936,892 RGD:9068941
G Nanos3 nanos C2HC-type zinc finger 3 JBrowse link NW_004955415 32,648,455 32,651,909 RGD:9068941
G Nobox NOBOX oogenesis homeobox JBrowse link NW_004955491 575,413 580,460 RGD:9068941
G Paqr5 progestin and adipoQ receptor family member 5 JBrowse link NW_004955450 7,089,521 7,108,981 RGD:9068941
G Paqr7 progestin and adipoQ receptor family member 7 JBrowse link NW_004955452 5,338,224 5,342,793 RGD:9068941
G Paqr8 progestin and adipoQ receptor family member 8 JBrowse link NW_004955411 5,691,228 5,743,438 RGD:9068941
G Piwil2 piwi like RNA-mediated gene silencing 2 JBrowse link NW_004955403 45,737,674 45,819,478 RGD:9068941
G Ptn pleiotrophin JBrowse link NW_004955494 5,580,264 5,681,848 RGD:9068941
G Sebox SEBOX homeobox JBrowse link NW_004955481 4,768,121 4,770,611 RGD:9068941
G Spo11 SPO11 initiator of meiotic double stranded breaks JBrowse link NW_004955445 2,088,144 2,103,385 RGD:9068941
G Src SRC proto-oncogene, non-receptor tyrosine kinase JBrowse link NW_004955445 19,213,210 19,227,670 RGD:9068941
G Stra8 stimulated by retinoic acid 8 JBrowse link NW_004955494 7,408,479 7,444,154 RGD:9068941
G Taf4b TATA-box binding protein associated factor 4b JBrowse link NW_004955402 14,296,202 14,425,298 RGD:9068941
G Trip13 thyroid hormone receptor interactor 13 JBrowse link NW_004955504 434,187 452,636 RGD:9068941
egg coat formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Zp3 zona pellucida glycoprotein 3 JBrowse link NW_004955456 15,013,472 15,020,809 RGD:9068941
mammalian oogenesis stage term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rps6 ribosomal protein S6 JBrowse link NW_004955434 21,744,045 21,745,646 RGD:9068941
negative regulation of oocyte development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Igf1 insulin like growth factor 1 JBrowse link NW_004955405 37,505,830 37,582,152 RGD:9068941
negative regulation of oocyte maturation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nppc natriuretic peptide C JBrowse link NW_004955453 3,884,580 3,888,494 RGD:9068941
G Npr2 natriuretic peptide receptor 2 JBrowse link NW_004955472 506,351 523,647 RGD:9068941
G Wee2 WEE1 homolog 2 JBrowse link NW_004955494 1,836,909 1,869,384 RGD:9068941
oocyte development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atm ATM serine/threonine kinase JBrowse link NW_004955412 10,422,753 10,531,406 RGD:9068941
G Bcl2 BCL2 apoptosis regulator JBrowse link NW_004955402 46,911,125 47,084,214 RGD:9068941
G Ctnnb1 catenin beta 1 JBrowse link NW_004955420 29,030,716 29,047,447 RGD:9068941
G Dmrt1 doublesex and mab-3 related transcription factor 1 JBrowse link NW_004955434 5,341,519 5,448,049 RGD:9068941
G Figla folliculogenesis specific bHLH transcription factor JBrowse link NW_004955424 14,393,566 14,402,971 RGD:9068941
G Inhbb inhibin subunit beta B JBrowse link NW_004955459 9,482,998 9,488,489 RGD:9068941
G Meioc meiosis specific with coiled-coil domain JBrowse link NW_004955451 17,534,644 17,547,095 RGD:9068941
G Wnt4 Wnt family member 4 JBrowse link NW_004955452 2,319,446 2,344,740 RGD:9068941
G Ybx2 Y-box binding protein 2 JBrowse link NW_004955467 9,624,506 9,629,904 RGD:9068941
G Ythdc2 YTH domain containing 2 JBrowse link NW_004955408 33,380,822 33,448,188 RGD:9068941
G Zglp1 zinc finger GATA like protein 1 JBrowse link NW_004955495 1,585,473 1,590,321 RGD:9068941
G Zp3 zona pellucida glycoprotein 3 JBrowse link NW_004955456 15,013,472 15,020,809 RGD:9068941
oocyte differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Kmt2b lysine methyltransferase 2B JBrowse link NW_004955468 2,813,183 2,834,326 RGD:9068941
G Lgr5 leucine rich repeat containing G protein-coupled receptor 5 JBrowse link NW_004955405 11,507,083 11,574,504 RGD:9068941
G Npm2 nucleophosmin/nucleoplasmin 2 JBrowse link NW_004955403 45,517,426 45,539,216 RGD:9068941
G Sohlh1 spermatogenesis and oogenesis specific basic helix-loop-helix 1 JBrowse link NW_004955513 4,767,591 4,771,654 RGD:9068941
G Sohlh2 spermatogenesis and oogenesis specific basic helix-loop-helix 2 JBrowse link NW_004955431 9,874,783 9,952,044 RGD:9068941
oocyte growth term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Foxl2 forkhead box L2 JBrowse link NW_004955501 83,965 84,476 RGD:9068941
G Gdf9 growth differentiation factor 9 JBrowse link NW_004955408 4,234,208 4,239,795 RGD:9068941
G Kmt2d lysine methyltransferase 2D JBrowse link NW_004955500 7,850,782 7,891,703 RGD:9068941
oocyte maturation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Brca2 BRCA2 DNA repair associated JBrowse link NW_004955431 13,449,287 13,526,878 RGD:9068941
G Ccnb1 cyclin B1 JBrowse link NW_004955446 140,661 149,500 RGD:9068941
G Cdc25b cell division cycle 25B JBrowse link NW_004955415 14,637,295 14,647,181 RGD:9068941
G Dazl deleted in azoospermia like JBrowse link NW_004955430 8,869,419 8,880,782 RGD:9068941
G Dmc1 DNA meiotic recombinase 1 JBrowse link NW_004955413 24,685,311 24,724,269 RGD:9068941
G Ereg epiregulin JBrowse link NW_004955474 612,440 627,606 RGD:9068941
G Fbxo5 F-box protein 5 JBrowse link NW_004955439 8,830,658 8,843,653 RGD:9068941
G Foxo3 forkhead box O3 JBrowse link NW_004955411 33,655,958 33,770,829 RGD:9068941
G Pabpc1l poly(A) binding protein cytoplasmic 1 like JBrowse link NW_004955445 12,425,738 12,450,830 RGD:9068941
G Pde3a phosphodiesterase 3A JBrowse link NW_004955413 16,340,827 16,642,731 RGD:9068941
G Ptk2b protein tyrosine kinase 2 beta JBrowse link NW_004955403 49,856,056 49,970,800 RGD:9068941
G Rec8 REC8 meiotic recombination protein JBrowse link NW_004955409 36,223,783 36,231,749 RGD:9068941
G Rps6ka2 ribosomal protein S6 kinase A2 JBrowse link NW_004955439 15,210,882 15,487,305 RGD:9068941
G Rxfp2 relaxin family peptide receptor 2 JBrowse link NW_004955431 14,050,537 14,105,852 RGD:9068941
G Trip13 thyroid hormone receptor interactor 13 JBrowse link NW_004955504 434,187 452,636 RGD:9068941
G Tut4 terminal uridylyl transferase 4 JBrowse link NW_004955464 6,610,350 6,734,606 RGD:9068941
G Tut7 terminal uridylyl transferase 7 JBrowse link NW_004955432 1,268,217 1,330,385 RGD:9068941
G Washc5 WASH complex subunit 5 JBrowse link NW_004955461 145,993 199,274 RGD:9068941
G Ythdf2 YTH N6-methyladenosine RNA binding protein 2 JBrowse link NW_004955452 7,783,398 7,815,468 RGD:9068941
ovarian cumulus expansion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bmpr1b bone morphogenetic protein receptor type 1B JBrowse link NW_004955405 5,408,171 5,784,930 RGD:9068941
G Ereg epiregulin JBrowse link NW_004955474 612,440 627,606 RGD:9068941
G Ptx3 pentraxin 3 JBrowse link NW_004955448 8,366,795 8,373,010 RGD:9068941
P granule organization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pld6 phospholipase D family member 6 JBrowse link NW_004955577 698,741 702,977 RGD:9068941
G Tdrd5 tudor domain containing 5 JBrowse link NW_004955406 18,895,010 18,961,200 RGD:9068941
positive regulation of oocyte development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pde3a phosphodiesterase 3A JBrowse link NW_004955413 16,340,827 16,642,731 RGD:9068941
G Pde5a phosphodiesterase 5A JBrowse link NW_004955428 20,785,497 20,904,717 RGD:9068941
positive regulation of oocyte maturation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aurka aurora kinase A JBrowse link NW_004955445 2,831,073 2,853,151 RGD:9068941
G Sirt2 sirtuin 2 JBrowse link NW_004955468 626,365 644,441 RGD:9068941
preantral ovarian follicle growth term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Amh anti-Mullerian hormone JBrowse link NW_004955495 5,893,375 5,896,152 RGD:9068941
G Gpr149 G protein-coupled receptor 149 JBrowse link NW_004955448 5,682,132 5,749,533 RGD:9068941
G Znf830 zinc finger protein 830 JBrowse link NW_004955481 9,661,791 9,663,326 RGD:9068941
primary follicle stage term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ereg epiregulin JBrowse link NW_004955474 612,440 627,606 RGD:9068941
regulation of meiotic cell cycle process involved in oocyte maturation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ppp2r1a protein phosphatase 2 scaffold subunit Aalpha JBrowse link NW_004955558 381,794 410,485 RGD:9068941
G Ythdf2 YTH N6-methyladenosine RNA binding protein 2 JBrowse link NW_004955452 7,783,398 7,815,468 RGD:9068941
vitelline membrane formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ihh Indian hedgehog signaling molecule JBrowse link NW_004955453 14,376,665 14,382,536 RGD:9068941

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 14528
    cellular process 13346
      cellular process involved in reproduction in multicellular organism 319
        germ cell development 235
          oogenesis 85
            egg coat formation + 2
            eggshell formation + 0
            female germ-line cyst formation + 0
            female germ-line stem cell asymmetric division 0
            germarium-derived egg chamber formation + 0
            growth of a germarium-derived egg chamber + 0
            mammalian oogenesis stage + 7
            negative regulation of oogenesis + 4
            nurse cell apoptotic process + 0
            oocyte differentiation + 49
            oocyte karyosome formation 0
            ovarian follicle cell development + 0
            ovarian nurse cell to oocyte transport + 0
            positive regulation of oogenesis + 4
            regulation of oogenesis + 10
Path 2
Term Annotations click to browse term
  biological_process 14528
    reproduction 1312
      reproductive process 1309
        multi-organism reproductive process 883
          sexual reproduction 726
            gamete generation 595
              female gamete generation 131
                oogenesis 85
                  egg coat formation + 2
                  eggshell formation + 0
                  female germ-line cyst formation + 0
                  female germ-line stem cell asymmetric division 0
                  germarium-derived egg chamber formation + 0
                  growth of a germarium-derived egg chamber + 0
                  mammalian oogenesis stage + 7
                  negative regulation of oogenesis + 4
                  nurse cell apoptotic process + 0
                  oocyte differentiation + 49
                  oocyte karyosome formation 0
                  ovarian follicle cell development + 0
                  ovarian nurse cell to oocyte transport + 0
                  positive regulation of oogenesis + 4
                  regulation of oogenesis + 10
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.