ONTOLOGY REPORT - ANNOTATIONS


Term:synaptic vesicle transport
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Accession:GO:0048489 term browser browse the term
Definition:The directed movement of synaptic vesicles.
Synonyms:related_synonym: synaptic vesicle fission;   synaptic vesicle fusion;   synaptic vesicle trafficking
 alt_id: GO:0016181


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synaptic vesicle transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cdk5 cyclin-dependent kinase 5 JBrowse link 4 7,282,945 7,287,427 RGD:13792537
G Ctnnb1 catenin beta 1 JBrowse link 8 129,601,511 129,628,378 RGD:1624291
RGD:1600115
G Dpysl2 dihydropyrimidinase-like 2 JBrowse link 15 43,475,640 43,581,725 RGD:2316240
G Fgfr2 fibroblast growth factor receptor 2 JBrowse link 1 200,590,951 200,696,946 RGD:1624291
G Kif5a kinesin family member 5A JBrowse link 7 70,515,832 70,552,897 RGD:13792537
G Lin7a lin-7 homolog A, crumbs cell polarity complex component JBrowse link 7 49,429,613 49,627,835 RGD:1624291
RGD:1600115
G Mylk2 myosin light chain kinase 2 JBrowse link 3 148,386,185 148,397,851 RGD:1600508
G Nlgn1 neuroligin 1 JBrowse link 2 111,057,291 111,973,681 RGD:8554760
G Rab3a RAB3A, member RAS oncogene family JBrowse link 16 20,435,098 20,439,206 RGD:1624291
RGD:1600115
G Snapin SNAP-associated protein JBrowse link 2 189,878,159 189,880,743 RGD:1624291
RGD:1600115
G Snca synuclein alpha JBrowse link 4 90,782,412 90,883,236 RGD:1624291
RGD:1600115
G Spg11 SPG11 vesicle trafficking associated, spatacsin JBrowse link 3 113,999,600 114,064,438 RGD:1624291
RGD:1600115
G Synj1 synaptojanin 1 JBrowse link 11 31,105,784 31,181,573 RGD:1624291
G Tmem230 transmembrane protein 230 JBrowse link 3 124,870,867 124,879,274 RGD:1624291
RGD:1600115
G Tor1a torsin family 1, member A JBrowse link 3 9,800,322 9,807,318 RGD:1624291
RGD:1600115
anterograde synaptic vesicle transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ap3b1 adaptor related protein complex 3 subunit beta 1 JBrowse link 2 24,022,815 24,227,522 RGD:1624291
RGD:13792537
G Ap3b2 adaptor related protein complex 3 subunit beta 2 JBrowse link 1 143,284,041 143,315,846 RGD:1624291
RGD:13792537
G Ap3d1 adaptor related protein complex 3 subunit delta 1 JBrowse link 7 11,838,639 11,873,992 RGD:1624291
RGD:13792537
G Ap3m1 adaptor related protein complex 3 subunit mu 1 JBrowse link 15 3,435,998 3,454,281 RGD:1600115
RGD:1624291
G Ap3m2 adaptor related protein complex 3 subunit mu 2 JBrowse link 16 74,075,842 74,091,230 RGD:1600115
RGD:1624291
G Ap3s1 adaptor related protein complex 3 subunit sigma 1 JBrowse link 18 40,732,472 40,798,064 RGD:1624291
G Ap3s2 adaptor related protein complex 3 subunit sigma 2 JBrowse link 1 141,612,961 141,655,417 RGD:1624291
RGD:1600115
G Bloc1s1 biogenesis of lysosomal organelles complex-1, subunit 1 JBrowse link 7 3,342,630 3,346,238 RGD:1624291
RGD:1600115
G Bloc1s2 biogenesis of lysosomal organelles complex-1, subunit 2 JBrowse link 1 263,913,901 263,920,989 RGD:1600115
RGD:1624291
G Bloc1s3 biogenesis of lysosomal organelles complex-1, subunit 3 JBrowse link 1 80,414,766 80,417,385 RGD:1624291
RGD:1600115
G Bloc1s4 biogenesis of lysosomal organelles complex 1 subunit 4 JBrowse link 14 79,013,808 79,015,108 RGD:1624291
RGD:1600115
G Bloc1s5 biogenesis of lysosomal organelles complex 1 subunit 5 JBrowse link 17 26,808,193 26,833,257 RGD:1624291
RGD:1600115
G Bloc1s6 biogenesis of lysosomal organelles complex 1 subunit 6 JBrowse link 3 114,869,478 114,880,218 RGD:1624291
RGD:1600115
G Dtnbp1 dystrobrevin binding protein 1 JBrowse link 17 20,090,136 20,182,332 RGD:1624291
RGD:1600115
G Madd MAP-kinase activating death domain JBrowse link 3 79,960,301 80,003,023 RGD:1624291
G Snapin SNAP-associated protein JBrowse link 2 189,878,159 189,880,743 RGD:1624291
RGD:1600115
G Trim46 tripartite motif-containing 46 JBrowse link 2 188,548,608 188,561,617 RGD:1624291
negative regulation of anterograde synaptic vesicle transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cnih2 cornichon family AMPA receptor auxiliary protein 2 JBrowse link 1 220,474,485 220,480,723 RGD:10400859
positive regulation of anterograde synaptic vesicle transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Map2 microtubule-associated protein 2 JBrowse link 9 73,204,753 73,462,965 RGD:13514087
regulation of synaptic vesicle budding from presynaptic endocytic zone membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Slc2a4 solute carrier family 2 member 4 JBrowse link 10 56,552,921 56,558,562 RGD:13702195
regulation of synaptic vesicle transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Lrrk2 leucine-rich repeat kinase 2 JBrowse link 7 132,857,311 133,018,549 RGD:1624291
RGD:13792537
G Picalm phosphatidylinositol binding clathrin assembly protein JBrowse link 1 154,377,229 154,458,966 RGD:8554167
synaptic vesicle budding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Arf1 ADP-ribosylation factor 1 JBrowse link 10 45,562,700 45,579,214 RGD:9684955
synaptic vesicle budding from endosome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ap1s2 adaptor related protein complex 1 subunit sigma 2 JBrowse link X 32,329,883 32,376,301 RGD:1624291
G Ap3b1 adaptor related protein complex 3 subunit beta 1 JBrowse link 2 24,022,815 24,227,522 RGD:1600115
RGD:1624291
G Ap3d1 adaptor related protein complex 3 subunit delta 1 JBrowse link 7 11,838,639 11,873,992 RGD:12050120
RGD:13792537
RGD:1624291
G Btbd8 BTB domain containing 8 JBrowse link 14 3,282,422 3,351,740 RGD:1624291
synaptic vesicle budding from presynaptic endocytic zone membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dnm1 dynamin 1 JBrowse link 3 11,338,081 11,382,043 RGD:1624291
RGD:13792537
G Dnm2 dynamin 2 JBrowse link 8 22,458,869 22,540,649 RGD:13792537
G Dnm3 dynamin 3 JBrowse link 13 79,906,711 80,379,967 RGD:1624291
RGD:13792537
G Eps15 epidermal growth factor receptor pathway substrate 15 JBrowse link 5 128,923,809 129,022,268 RGD:9685531
G Picalm phosphatidylinositol binding clathrin assembly protein JBrowse link 1 154,377,229 154,458,966 RGD:13792537
G Snap91 synaptosome associated protein 91 JBrowse link 8 94,447,558 94,564,772 RGD:1624291
RGD:13792537
synaptic vesicle coating term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cltb clathrin, light chain B JBrowse link 17 10,537,348 10,554,999 RGD:70686

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17942
    localization 6006
      establishment of localization 4609
        transport 4468
          synaptic vesicle transport 45
            negative regulation of synaptic vesicle transport + 1
            positive regulation of synaptic vesicle transport + 1
            regulation of synaptic vesicle transport + 5
            synaptic vesicle budding + 13
            synaptic vesicle cytoskeletal transport + 19
Path 2
Term Annotations click to browse term
  biological_process 17942
    localization 6006
      cellular localization 2665
        organelle localization 508
          vesicle localization 148
            establishment of vesicle localization 128
              synaptic vesicle transport 45
                negative regulation of synaptic vesicle transport + 1
                positive regulation of synaptic vesicle transport + 1
                regulation of synaptic vesicle transport + 5
                synaptic vesicle budding + 13
                synaptic vesicle cytoskeletal transport + 19
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.