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ONTOLOGY REPORT - ANNOTATIONS


Term:rhythmic process
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Accession:GO:0048511 term browser browse the term
Definition:Any process pertinent to the generation and maintenance of rhythms in the physiology of an organism.
Synonyms:related_synonym: rhythm
 only_in_taxon: NCBITaxon:131567 ! cellular organisms


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rhythmic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 ISO RGD PMID:16477151 RGD:1642190 NCBI chrNW_004955513:5,154,864...5,178,636
Ensembl chrNW_004955513:5,154,864...5,178,636
JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A ISO RGD PMID:16477151 RGD:1642190 NCBI chrNW_004955442:8,171,114...8,565,187
Ensembl chrNW_004955442:8,174,232...8,562,059
JBrowse link
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B ISO RGD PMID:16477151 RGD:1642190 NCBI chrNW_004955413:10,358,931...10,780,004
Ensembl chrNW_004955413:10,376,597...10,779,145
JBrowse link
G Grin3a glutamate ionotropic receptor NMDA type subunit 3A ISO RGD PMID:16477151 RGD:1642190 NCBI chrNW_004955419:24,105,360...24,272,533
Ensembl chrNW_004955419:24,104,820...24,273,113
JBrowse link
G Hes7 hes family bHLH transcription factor 7 ISO (MGI:MGI:2152470|PMID:11641270)
(MGI:MGI:3046002|PMID:15170214)
MGI PMID:11641270, PMID:15170214 MGI:MGI:2152470, MGI:MGI:3046002 NCBI chrNW_004955467:8,837,895...8,841,062
Ensembl chrNW_004955467:8,837,886...8,841,739
JBrowse link
antral ovarian follicle growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccne1 cyclin E1 ISO RGD PMID:17084963 RGD:2289278 NCBI chrNW_004955468:7,803,610...7,814,872
Ensembl chrNW_004955468:7,803,346...7,814,872
JBrowse link
G Chat choline O-acetyltransferase ISO RGD PMID:16846505 RGD:1600848 NCBI chrNW_004955556:650,290...695,135
Ensembl chrNW_004955556:650,279...693,276
JBrowse link
G Esr1 estrogen receptor 1 ISO (MGI:MGI:1889238|PMID:10976058) MGI PMID:10976058 MGI:MGI:1889238 NCBI chrNW_004955439:9,588,631...9,953,606
Ensembl chrNW_004955439:9,588,201...9,963,353
JBrowse link
G Foxo3 forkhead box O3 ISO (MGI:MGI:3036413|PMID:14978268) MGI PMID:14978268 MGI:MGI:3036413 NCBI chrNW_004955411:33,655,958...33,770,829
Ensembl chrNW_004955411:33,655,958...33,770,829
JBrowse link
G Gas2 growth arrest specific 2 ISO (MGI:MGI:6102554|PMID:27734842) MGI PMID:27734842 MGI:MGI:6102554 NCBI chrNW_004955476:3,092,461...3,226,269
Ensembl chrNW_004955476:3,100,479...3,226,262
JBrowse link
G Gpr149 G protein-coupled receptor 149 ISO (MGI:MGI:4438524|PMID:19887567) MGI PMID:19887567 MGI:MGI:4438524 NCBI chrNW_004955448:5,682,132...5,749,533
Ensembl chrNW_004955448:5,685,168...5,749,467
JBrowse link
apoptotic process involved in luteolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Robo2 roundabout guidance receptor 2 ISO (PMID:18566128) UniProtKB PMID:18566128 NCBI chrNW_004955407:14,301,689...15,549,561
Ensembl chrNW_004955407:14,305,498...14,842,790
JBrowse link
G Slit2 slit guidance ligand 2 ISO (PMID:18566128) UniProtKB PMID:18566128 NCBI chrNW_004955480:3,982,977...4,314,160
Ensembl chrNW_004955480:3,984,586...4,313,908
JBrowse link
G Slit3 slit guidance ligand 3 ISO (PMID:18566128) UniProtKB PMID:18566128 NCBI chrNW_004955408:21,719,487...22,322,958
Ensembl chrNW_004955408:21,722,632...22,322,917
JBrowse link
circadian behavior term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Btbd9 BTB domain containing 9 ISO (MGI:MGI:5436392|PMID:22678064) MGI PMID:22678064 MGI:MGI:5436392 NCBI chrNW_004955437:4,765,234...5,145,033 JBrowse link
G Csnk1e casein kinase 1 epsilon ISO RGD PMID:17502429 RGD:10395242 NCBI chrNW_004955413:24,560,889...24,591,669 JBrowse link
G Gpr157 G protein-coupled receptor 157 ISO (MGI:MGI:5825412|PMID:27142930) UniProtKB PMID:27142930 MGI:MGI:5825412 NCBI chrNW_004955486:4,172,515...4,188,887
Ensembl chrNW_004955486:4,172,515...4,189,137
JBrowse link
G Gpr176 G protein-coupled receptor 176 ISO (MGI:MGI:5790765|PMID:26882873) UniProtKB PMID:26882873 MGI:MGI:5790765 NCBI chrNW_004955416:6,735,790...6,879,078
Ensembl chrNW_004955416:6,735,636...6,878,982
JBrowse link
G Nr1d2 nuclear receptor subfamily 1 group D member 2 ISO (MGI:MGI:6157418|PMID:29723273) UniProt PMID:29723273 MGI:MGI:6157418 NCBI chrNW_004955430:15,812,449...15,834,341
Ensembl chrNW_004955430:15,812,448...15,834,412
JBrowse link
G Six3 SIX homeobox 3 ISO (MGI:MGI:4949943|PMID:21525287) MGI PMID:21525287 MGI:MGI:4949943 NCBI chrNW_004955441:11,966,389...11,978,545
Ensembl chrNW_004955441:11,966,389...11,979,466
JBrowse link
G Tp53 tumor protein p53 ISO (MGI:MGI:5613453|PMID:24051492) UniProtKB PMID:24051492 MGI:MGI:5613453 NCBI chrNW_004955467:9,241,391...9,256,716
Ensembl chrNW_004955467:9,252,130...9,255,928
JBrowse link
G Usp2 ubiquitin specific peptidase 2 ISO (MGI:MGI:5607210|PMID:23213472) UniProtKB PMID:23213472 MGI:MGI:5607210 NCBI chrNW_004955412:20,435,778...20,461,898
Ensembl chrNW_004955412:20,433,302...20,457,493
JBrowse link
circadian regulation of gene expression term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adk adenosine kinase ISO RGD PMID:12675911 RGD:2291861 NCBI chrNW_004955437:17,279,541...17,786,140
Ensembl chrNW_004955437:17,279,240...17,786,079
JBrowse link
G Ahr aryl hydrocarbon receptor ISO (MGI:MGI:4820700|PMID:20106950) UniProtKB PMID:20106950 MGI:MGI:4820700 NCBI chrNW_004955410:20,428,531...20,459,482 JBrowse link
G Arntl aryl hydrocarbon receptor nuclear translocator like ISO (MGI:MGI:5442460|PMID:22653727), (MGI:MGI:5568140|PMID:24736997)
(PMID:24005054)
(MGI:MGI:3843127|PMID:19299583), (MGI:MGI:3843754|PMID:19141540), (MGI:MGI:4819446|PMID:20562852), (MGI:MGI:5437152|PMID:22611086), (MGI:MGI:5553223|PMID:23525013)
UniProtKB PMID:19141540, PMID:19299583, PMID:20562852, PMID:22611086, PMID:22653727, PMID:23525013, PMID:24005054, PMID:24736997 MGI:MGI:3843127, MGI:MGI:3843754, MGI:MGI:4819446, MGI:MGI:5437152, MGI:MGI:5442460, MGI:MGI:5553223, MGI:MGI:5568140 NCBI chrNW_004955414:28,652,663...28,748,360
Ensembl chrNW_004955414:28,684,226...28,748,360
JBrowse link
G Atf4 activating transcription factor 4 ISO (MGI:MGI:5292598|PMID:21768648) UniProtKB PMID:21768648 MGI:MGI:5292598 NCBI chrNW_004955413:25,406,589...25,408,727
Ensembl chrNW_004955413:25,406,589...25,412,218
JBrowse link
G Bhlhe40 basic helix-loop-helix family member e40 ISO (PMID:18411297)
(MGI:MGI:3798698|PMID:18411297), (MGI:MGI:6282958|PMID:30012868)
BHF-UCL PMID:18411297, PMID:30012868 MGI:MGI:3798698, MGI:MGI:6282958 NCBI chrNW_004955421:8,463,337...8,468,877
Ensembl chrNW_004955421:8,463,018...8,468,877
JBrowse link
G Bhlhe41 basic helix-loop-helix family member e41 ISO (MGI:MGI:3798698|PMID:18411297) BHF-UCL PMID:18411297 MGI:MGI:3798698 NCBI chrNW_004955413:21,100,021...21,103,358 JBrowse link
G Cartpt CART prepropeptide ISO PMID:15680948 HGNC PMID:15680948 RGD:8553315 NCBI chrNW_004955575:551,991...555,118
Ensembl chrNW_004955575:551,991...555,149
JBrowse link
G Cavin3 caveolae associated protein 3 ISO (MGI:MGI:5508702|PMID:23079727) UniProtKB PMID:23079727 MGI:MGI:5508702 NCBI chrNW_004955414:22,052,885...22,054,672
Ensembl chrNW_004955414:22,050,109...22,054,374
JBrowse link
G Ciart circadian associated repressor of transcription ISO (MGI:MGI:5545849|PMID:24385426), (MGI:MGI:5568140|PMID:24736997) UniProtKB PMID:24385426, PMID:24736997 MGI:MGI:5545849, MGI:MGI:5568140 NCBI chrNW_004955413:490,117...494,332 JBrowse link
G Clock clock circadian regulator ISO (PMID:24005054)
(PMID:21980503), (PMID:28985504)
(MGI:MGI:2683983|PMID:14672706), (MGI:MGI:3794495|PMID:18316400), (MGI:MGI:3843127|PMID:19299583), (MGI:MGI:3843754|PMID:19141540), (MGI:MGI:4837055|PMID:20430893), (MGI:MGI:5292598|PMID:21768648), (MGI:MGI:5297789|PMID:15147242), (MGI:MGI:5442460|PMID:22653727), (MGI:MGI:5503234|PMID:23785138), (MGI:MGI:6282958|PMID:30012868)
UniProtKB
UniProt
PMID:14672706, PMID:15147242, PMID:18316400, PMID:19141540, PMID:19299583, PMID:20430893, PMID:21768648, PMID:21980503, PMID:22653727, PMID:23785138, PMID:24005054, PMID:28985504, PMID:30012868 MGI:MGI:2683983, MGI:MGI:3794495, MGI:MGI:3843127, MGI:MGI:3843754, MGI:MGI:4837055, MGI:MGI:5292598, MGI:MGI:5297789, MGI:MGI:5442460, MGI:MGI:5503234, MGI:MGI:6282958 NCBI chrNW_004955447:15,394,496...15,537,969
Ensembl chrNW_004955447:15,454,630...15,530,906
JBrowse link
G Crem cAMP responsive element modulator ISO (MGI:MGI:5494765|PMID:23443664) UniProtKB PMID:23443664 MGI:MGI:5494765 NCBI chrNW_004955462:2,491,504...2,547,587
Ensembl chrNW_004955462:2,491,504...2,536,385
JBrowse link
G Cry1 cryptochrome circadian regulator 1 ISO (MGI:MGI:3843127|PMID:19299583), (MGI:MGI:5464222|PMID:23133559), (MGI:MGI:5490394|PMID:23616524), (MGI:MGI:5545849|PMID:24385426)
(MGI:MGI:5302136|PMID:22170608)
UniProtKB PMID:19299583, PMID:22170608, PMID:23133559, PMID:23616524, PMID:24385426 MGI:MGI:3843127, MGI:MGI:5302136, MGI:MGI:5464222, MGI:MGI:5490394, MGI:MGI:5545849 NCBI chrNW_004955405:40,878,227...40,941,664
Ensembl chrNW_004955405:40,874,322...40,941,664
JBrowse link
G Cry2 cryptochrome circadian regulator 2 ISO (MGI:MGI:3843127|PMID:19299583), (MGI:MGI:5490394|PMID:23616524)
(MGI:MGI:5302136|PMID:22170608)
UniProtKB PMID:19299583, PMID:22170608, PMID:23616524 MGI:MGI:3843127, MGI:MGI:5302136, MGI:MGI:5490394 NCBI chrNW_004955422:2,084,020...2,114,980
Ensembl chrNW_004955422:2,083,138...2,115,072
JBrowse link
G Csnk1d casein kinase 1 delta ISO (MGI:MGI:3849793|PMID:19414593), (MGI:MGI:5294280|PMID:21930935) UniProtKB PMID:19414593, PMID:21930935 MGI:MGI:3849793, MGI:MGI:5294280 NCBI chrNW_004955506:904,659...936,293
Ensembl chrNW_004955506:904,660...935,330
JBrowse link
G Csnk1e casein kinase 1 epsilon ISO (MGI:MGI:5294280|PMID:21930935) UniProtKB PMID:21930935 MGI:MGI:5294280 NCBI chrNW_004955413:24,560,889...24,591,669 JBrowse link
G Drd2 dopamine receptor D2 ISO (MGI:MGI:3625767|PMID:16606840) MGI PMID:16606840 MGI:MGI:3625767 NCBI chrNW_004955412:15,054,255...15,114,558
Ensembl chrNW_004955412:15,054,038...15,114,573
JBrowse link
G Drd3 dopamine receptor D3 ISO (MGI:MGI:3611612|PMID:15878801) MGI PMID:15878801 MGI:MGI:3611612 NCBI chrNW_004955427:14,219,519...14,252,178
Ensembl chrNW_004955427:14,219,594...14,252,178
JBrowse link
G Egr1 early growth response 1 ISO (MGI:MGI:6219065|PMID:26471974), (MGI:MGI:6258624|PMID:29138967) UniProt PMID:26471974, PMID:29138967 MGI:MGI:6219065, MGI:MGI:6258624 NCBI chrNW_004955418:2,001,509...2,005,269
Ensembl chrNW_004955418:2,002,699...2,005,007
JBrowse link
G Gfpt1 glutamine--fructose-6-phosphate transaminase 1 ISO (MGI:MGI:5495336|PMID:23395176) UniProtKB PMID:23395176 MGI:MGI:5495336 NCBI chrNW_004955424:15,692,088...15,739,894
Ensembl chrNW_004955424:15,692,088...15,739,894
JBrowse link
G Hdac1 histone deacetylase 1 ISO (MGI:MGI:5567917|PMID:15226430) UniProtKB PMID:15226430 MGI:MGI:5567917 NCBI chrNW_004955452:10,636,366...10,668,873
Ensembl chrNW_004955452:10,636,366...10,670,864
JBrowse link
G Hdac2 histone deacetylase 2 ISO (MGI:MGI:5567917|PMID:15226430) UniProtKB PMID:15226430 MGI:MGI:5567917 NCBI chrNW_004955526:2,739,099...2,759,640
Ensembl chrNW_004955526:2,728,377...2,759,707
JBrowse link
G Hdac3 histone deacetylase 3 ISO (MGI:MGI:5882311|PMID:26776516)
(MGI:MGI:3821398|PMID:19037247)
UniProt
MGI
PMID:19037247, PMID:26776516 MGI:MGI:3821398, MGI:MGI:5882311 NCBI chrNW_004955415:12,138,520...12,154,234
Ensembl chrNW_004955415:12,138,870...12,154,234
JBrowse link
G Hnf1b HNF1 homeobox B ISO RGD PMID:9545279 RGD:2312721 NCBI chrNW_004955451:320,283...371,420
Ensembl chrNW_004955451:320,283...371,420
JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U ISO (MGI:MGI:3794926|PMID:18332112) UniProtKB PMID:18332112 MGI:MGI:3794926 NCBI chrNW_004955406:8,000,269...8,021,554
Ensembl chrNW_004955406:8,000,269...8,021,554
JBrowse link
G Huwe1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 ISO (MGI:MGI:4458969|PMID:20534529)
(PMID:20534529)
UniProt PMID:20534529 MGI:MGI:4458969 NCBI chrNW_004955475:550,643...671,771
Ensembl chrNW_004955475:551,159...671,747
JBrowse link
G Id2 inhibitor of DNA binding 2 ISO (MGI:MGI:4420353|PMID:19740747) UniProtKB PMID:19740747 MGI:MGI:4420353 NCBI chrNW_004955487:878,326...880,783
Ensembl chrNW_004955487:878,326...880,783
JBrowse link
G Kdm2a lysine demethylase 2A ISO (PMID:26037310) UniProt PMID:26037310 NCBI chrNW_004955422:18,201,243...18,308,163
Ensembl chrNW_004955422:18,200,758...18,308,163
JBrowse link
G Kdm5a lysine demethylase 5A ISO (MGI:MGI:5288521|PMID:21960634) UniProtKB PMID:21960634 MGI:MGI:5288521 NCBI chrNW_004955454:6,774,308...6,865,047
Ensembl chrNW_004955454:6,774,476...6,865,033
JBrowse link
G Kdm8 lysine demethylase 8 ISO (MGI:MGI:6270295|PMID:30500822) UniProt PMID:30500822 MGI:MGI:6270295 NCBI chrNW_004955493:5,437,344...5,462,849
Ensembl chrNW_004955493:5,437,090...5,462,294
JBrowse link
G Kmt2a lysine methyltransferase 2A ISO (MGI:MGI:5607228|PMID:21113167) UniProtKB PMID:21113167 MGI:MGI:5607228 NCBI chrNW_004955412:19,586,435...19,670,149 JBrowse link
G Lgr4 leucine rich repeat containing G protein-coupled receptor 4 ISO (MGI:MGI:5607511|PMID:24353284) UniProtKB PMID:24353284 MGI:MGI:5607511 NCBI chrNW_004955476:6,611,102...6,629,294
Ensembl chrNW_004955476:6,610,103...6,629,264
JBrowse link
G Maged1 MAGE family member D1 ISO (MGI:MGI:5508569|PMID:20300063) UniProtKB PMID:20300063 MGI:MGI:5508569 NCBI chrNW_004955543:2,939,960...3,052,442
Ensembl chrNW_004955543:2,975,259...3,052,504
JBrowse link
G Mc3r melanocortin 3 receptor ISO (MGI:MGI:3821632|PMID:19036988) UniProtKB PMID:19036988 MGI:MGI:3821632 NCBI chrNW_004955445:2,977,026...2,979,375
Ensembl chrNW_004955445:2,978,320...2,979,291
JBrowse link
G Mta1 metastasis associated 1 ISO (MGI:MGI:5582861|PMID:24089055) UniProtKB PMID:24089055 MGI:MGI:5582861 NCBI chrNW_004955538:3,630,383...3,671,005
Ensembl chrNW_004955538:3,634,341...3,671,005
JBrowse link
G Mybbp1a MYB binding protein 1a ISO (MGI:MGI:5009503|PMID:19129230) UniProtKB PMID:19129230 MGI:MGI:5009503 NCBI chrNW_004955467:12,390,371...12,405,055
Ensembl chrNW_004955467:12,390,037...12,404,971
JBrowse link
G Mycbp2 MYC binding protein 2 ISO (PMID:20534529)
(MGI:MGI:4458969|PMID:20534529)
UniProt PMID:20534529 MGI:MGI:4458969 NCBI chrNW_004955404:29,932,125...30,186,236
Ensembl chrNW_004955404:29,932,125...30,186,236
JBrowse link
G Nampt nicotinamide phosphoribosyltransferase ISO (MGI:MGI:3843127|PMID:19299583) UniProtKB PMID:19299583 MGI:MGI:3843127 NCBI chrNW_004955410:10,717,664...10,742,109
Ensembl chrNW_004955410:10,717,664...10,751,177
JBrowse link
G Ncoa2 nuclear receptor coactivator 2 ISO (MGI:MGI:5607392|PMID:24529706) UniProtKB PMID:24529706 MGI:MGI:5607392 NCBI chrNW_004955444:9,313,748...9,587,109
Ensembl chrNW_004955444:9,313,447...9,584,913
JBrowse link
G Ncor1 nuclear receptor corepressor 1 ISO (MGI:MGI:3821398|PMID:19037247) MGI PMID:19037247 MGI:MGI:3821398 NCBI chrNW_004955467:1,408,292...1,568,539
Ensembl chrNW_004955467:1,409,281...1,546,842
JBrowse link
G Ngfr nerve growth factor receptor ISO (MGI:MGI:5503234|PMID:23785138) UniProtKB PMID:23785138 MGI:MGI:5503234 NCBI chrNW_004955451:12,030,303...12,047,305
Ensembl chrNW_004955451:12,030,252...12,047,305
JBrowse link
G Noct nocturnin ISO (MGI:MGI:4837993|PMID:20685873) UniProtKB PMID:20685873 MGI:MGI:4837993 NCBI chrNW_004955428:4,559,027...4,580,013 JBrowse link
G Npas2 neuronal PAS domain protein 2 ISO (MGI:MGI:3794495|PMID:18316400), (MGI:MGI:5518489|PMID:24048828), (MGI:MGI:6282961|PMID:29163035) UniProt PMID:18316400, PMID:24048828, PMID:29163035 MGI:MGI:3794495, MGI:MGI:5518489, MGI:MGI:6282961 NCBI chrNW_004955470:6,826,541...6,906,814
Ensembl chrNW_004955470:6,831,992...6,905,679
JBrowse link
G Nr0b2 nuclear receptor subfamily 0 group B member 2 ISO (MGI:MGI:6275703|PMID:25212631), (MGI:MGI:6282985|PMID:30555544) UniProt PMID:25212631, PMID:30555544 MGI:MGI:6275703, MGI:MGI:6282985 NCBI chrNW_004955452:6,251,047...6,253,541
Ensembl chrNW_004955452:6,250,889...6,254,541
JBrowse link
G Nr1d1 nuclear receptor subfamily 1 group D member 1 ISO (MGI:MGI:4429726|PMID:20159955) UniProtKB PMID:20159955 MGI:MGI:4429726 NCBI chrNW_004955451:14,743,763...14,750,903
Ensembl chrNW_004955451:14,742,735...14,750,999
JBrowse link
G Nrip1 nuclear receptor interacting protein 1 ISO (PMID:21628546)
(MGI:MGI:5586794|PMID:21628546)
UniProtKB PMID:21628546 MGI:MGI:5586794 NCBI chrNW_004955407:16,740,253...16,820,297
Ensembl chrNW_004955407:16,740,253...16,820,297
JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase ISO (MGI:MGI:5495336|PMID:23395176) UniProtKB PMID:23395176 MGI:MGI:5495336 NCBI chrNW_004955475:11,062,258...11,112,252
Ensembl chrNW_004955475:11,062,076...11,114,169
JBrowse link
G Per1 period circadian regulator 1 ISO (MGI:MGI:4429726|PMID:20159955)
(MGI:MGI:3578039|PMID:15888647)
(PMID:18411297), (PMID:24005054)
UniProtKB
BHF-UCL
PMID:15888647, PMID:18411297, PMID:20159955, PMID:24005054 MGI:MGI:3578039, MGI:MGI:4429726 NCBI chrNW_004955467:8,798,436...8,813,369
Ensembl chrNW_004955467:8,797,912...8,813,365
JBrowse link
G Per2 period circadian regulator 2 ISO (MGI:MGI:1935010|PMID:11395012), (MGI:MGI:4410390|PMID:19917250), (MGI:MGI:5319572|PMID:22504074)
(MGI:MGI:4429726|PMID:20159955)
UniProtKB PMID:11395012, PMID:19917250, PMID:20159955, PMID:22504074 MGI:MGI:1935010, MGI:MGI:4410390, MGI:MGI:4429726, MGI:MGI:5319572 NCBI chrNW_004955542:2,331,547...2,369,011
Ensembl chrNW_004955542:2,338,099...2,371,274
JBrowse link
G Pml PML nuclear body scaffold ISO (MGI:MGI:5314433|PMID:22274616) UniProtKB PMID:22274616 MGI:MGI:5314433 NCBI chrNW_004955450:3,654,854...3,692,057
Ensembl chrNW_004955450:3,656,498...3,692,406
JBrowse link
G Ppara peroxisome proliferator activated receptor alpha ISO (MGI:MGI:4429726|PMID:20159955) UniProtKB PMID:20159955 MGI:MGI:4429726 NCBI chrNW_004955413:30,306,563...30,366,245
Ensembl chrNW_004955413:30,307,219...30,359,500
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha ISO (MGI:MGI:3715412|PMID:17476214) UniProtKB PMID:17476214 MGI:MGI:3715412 NCBI chrNW_004955480:543,397...1,188,376
Ensembl chrNW_004955480:1,078,322...1,188,435
JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha ISO (MGI:MGI:5294280|PMID:21930935) UniProtKB PMID:21930935 MGI:MGI:5294280 NCBI chrNW_004955422:18,076,670...18,079,859
Ensembl chrNW_004955422:18,076,670...18,079,859
JBrowse link
G Ppp1cb protein phosphatase 1 catalytic subunit beta ISO (MGI:MGI:5294280|PMID:21930935) UniProtKB PMID:21930935 MGI:MGI:5294280 NCBI chrNW_004955469:10,657,029...10,682,398
Ensembl chrNW_004955469:10,662,032...10,682,398
JBrowse link
G Ppp1cc protein phosphatase 1 catalytic subunit gamma ISO (MGI:MGI:5294280|PMID:21930935) UniProt PMID:21930935 MGI:MGI:5294280 NCBI chrNW_004955482:7,582,605...7,605,340
Ensembl chrNW_004955482:7,578,782...7,606,132
JBrowse link
G Prkg2 protein kinase cGMP-dependent 2 ISO (MGI:MGI:3630244|PMID:12725729) MGI PMID:12725729 MGI:MGI:3630244 NCBI chrNW_004955433:5,286,594...5,387,571
Ensembl chrNW_004955433:5,286,153...5,491,924
JBrowse link
G Prmt5 protein arginine methyltransferase 5 ISO (MGI:MGI:5464222|PMID:23133559) UniProtKB PMID:23133559 MGI:MGI:5464222 NCBI chrNW_004955409:37,369,507...37,378,034
Ensembl chrNW_004955409:37,369,234...37,378,093
JBrowse link
G Rai1 retinoic acid induced 1 ISO (MGI:MGI:5489969|PMID:22578325)
(PMID:22578325)
UniProtKB PMID:22578325 MGI:MGI:5489969 NCBI chrNW_004955577:185,404...296,613
Ensembl chrNW_004955577:183,051...200,139
JBrowse link
G Relb RELB proto-oncogene, NF-kB subunit ISO (MGI:MGI:5574290|PMID:22894897) UniProtKB PMID:22894897 MGI:MGI:5574290 NCBI chrNW_004955555:2,060,533...2,086,229
Ensembl chrNW_004955555:2,060,533...2,086,229
JBrowse link
G Rora RAR related orphan receptor A ISO (MGI:MGI:5504349|PMID:22753030) UniProtKB PMID:22753030 MGI:MGI:5504349 NCBI chrNW_004955450:14,262,199...14,434,611
Ensembl chrNW_004955450:14,262,190...14,425,233
JBrowse link
G Rorc RAR related orphan receptor C ISO (MGI:MGI:5504349|PMID:22753030), (MGI:MGI:5582866|PMID:23723244) UniProtKB PMID:22753030, PMID:23723244 MGI:MGI:5504349, MGI:MGI:5582866 NCBI chrNW_004955589:590,653...616,784
Ensembl chrNW_004955589:590,743...616,694
JBrowse link
G Sirt1 sirtuin 1 ISO (MGI:MGI:3807721|PMID:18662546), (MGI:MGI:3843127|PMID:19299583)
(PMID:18662546)
UniProtKB PMID:18662546, PMID:19299583 MGI:MGI:3807721, MGI:MGI:3843127 NCBI chrNW_004955425:20,280,725...20,307,663
Ensembl chrNW_004955425:20,279,963...20,307,663
JBrowse link
G Top1 DNA topoisomerase I ISO (PMID:22904072) UniProtKB PMID:22904072 NCBI chrNW_004955445:15,834,017...15,922,785
Ensembl chrNW_004955445:15,834,017...15,922,785
JBrowse link
G Usp2 ubiquitin specific peptidase 2 ISO (MGI:MGI:5607210|PMID:23213472), (MGI:MGI:5908516|PMID:26756164) UniProtKB PMID:23213472, PMID:26756164 MGI:MGI:5607210, MGI:MGI:5908516 NCBI chrNW_004955412:20,435,778...20,461,898
Ensembl chrNW_004955412:20,433,302...20,457,493
JBrowse link
G Zfhx3 zinc finger homeobox 3 ISO (MGI:MGI:5660827|PMID:26232227) UniProtKB PMID:26232227 MGI:MGI:5660827 NCBI chrNW_004955484:5,470,203...5,746,325
Ensembl chrNW_004955484:5,474,769...5,789,707
JBrowse link
G Zpbp2 zona pellucida binding protein 2 ISO (MGI:MGI:6364050|PMID:31560728) MGI PMID:31560728 MGI:MGI:6364050 NCBI chrNW_004955451:14,571,707...14,579,890
Ensembl chrNW_004955451:14,571,556...14,579,948
JBrowse link
circadian regulation of translation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnrnpd heterogeneous nuclear ribonucleoprotein D ISO (PMID:24423872) UniProtKB PMID:24423872 NCBI chrNW_004955433:6,452,931...6,470,209
Ensembl chrNW_004955433:6,454,454...6,469,904
JBrowse link
G Per1 period circadian regulator 1 ISO (MGI:MGI:1935010|PMID:11395012) UniProtKB PMID:11395012 MGI:MGI:1935010 NCBI chrNW_004955467:8,798,436...8,813,369
Ensembl chrNW_004955467:8,797,912...8,813,365
JBrowse link
G Per2 period circadian regulator 2 ISO (MGI:MGI:1935010|PMID:11395012) UniProtKB PMID:11395012 MGI:MGI:1935010 NCBI chrNW_004955542:2,331,547...2,369,011
Ensembl chrNW_004955542:2,338,099...2,371,274
JBrowse link
circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aanat aralkylamine N-acetyltransferase ISO (PMID:12736803) UniProtKB
RGD
PMID:12736803, PMID:16166080, PMID:18321474 RGD:2301031, RGD:2312676 NCBI chrNW_004955506:5,828,666...5,834,812
Ensembl chrNW_004955506:5,828,659...5,834,812
JBrowse link
G Abcb1 ATP binding cassette subfamily B member 1 ISO RGD PMID:20668054 RGD:4890035 NCBI chrNW_004955432:4,911,774...5,085,349 JBrowse link
G Actb actin beta ISO RGD PMID:9483199 RGD:11552588 NCBI chrNW_004955460:10,358,100...10,361,585
Ensembl chrNW_004955460:10,356,699...10,361,585
JBrowse link
G Adcy1 adenylate cyclase 1 ISO RGD PMID:8855334 RGD:1625750 NCBI chrNW_004955456:6,833,992...6,930,990
Ensembl chrNW_004955456:6,841,637...6,930,990
JBrowse link
G Adcy6 adenylate cyclase 6 ISO RGD PMID:16166080 RGD:2312676 NCBI chrNW_004955500:7,635,946...7,655,579
Ensembl chrNW_004955500:7,637,089...7,651,162
JBrowse link
G Adipoq adiponectin, C1Q and collagen domain containing ISO RGD PMID:21164040 RGD:5128545 NCBI chrNW_004955420:20,911,181...20,922,992
Ensembl chrNW_004955420:20,912,348...20,914,402
JBrowse link
G Agrp agouti related neuropeptide ISO RGD PMID:21060311 RGD:8693680 NCBI chrNW_004955484:9,165,120...9,166,789
Ensembl chrNW_004955484:9,165,120...9,166,789
JBrowse link
G Arntl aryl hydrocarbon receptor nuclear translocator like ISO (MGI:MGI:1928563|PMID:11163178)
(MGI:MGI:2179885|PMID:12024206), (MGI:MGI:2183702|PMID:12150932), (MGI:MGI:2667759|PMID:12843397), (MGI:MGI:2669067|PMID:12897057)
(MGI:MGI:3703208|PMID:17264215)
(PMID:14645221), (PMID:19217292), (PMID:19740747)
RGD
MGI
UniProtKB
PMID:9735336, PMID:9878515, PMID:11163178, PMID:12024206, PMID:12150932, PMID:12843397, PMID:12897057, PMID:14645221, PMID:17264215, PMID:19217292, PMID:19740747 MGI:MGI:1928563, MGI:MGI:2179885, MGI:MGI:2183702, MGI:MGI:2667759, MGI:MGI:2669067, MGI:MGI:3703208, RGD:10043346, RGD:67927 NCBI chrNW_004955414:28,652,663...28,748,360
Ensembl chrNW_004955414:28,684,226...28,748,360
JBrowse link
G Ass1 argininosuccinate synthase 1 ISO (MGI:MGI:6103563|PMID:28985504)
(PMID:28985504)
UniProtKB PMID:28985504 MGI:MGI:6103563 NCBI chrNW_004955513:443,372...485,190
Ensembl chrNW_004955513:445,462...485,190
JBrowse link
G Atf4 activating transcription factor 4 ISO (PMID:21768648) UniProtKB PMID:21768648 NCBI chrNW_004955413:25,406,589...25,408,727
Ensembl chrNW_004955413:25,406,589...25,412,218
JBrowse link
G Atf5 activating transcription factor 5 ISO (PMID:21768648) UniProtKB PMID:21768648 NCBI chrNW_004955559:1,008,208...1,013,023
Ensembl chrNW_004955559:1,008,208...1,013,023
JBrowse link
G Atoh7 atonal bHLH transcription factor 7 ISO (MGI:MGI:2445865|PMID:12451142) MGI PMID:12451142 MGI:MGI:2445865 NCBI chrNW_004955425:20,559,466...20,560,275 JBrowse link
G Atp7b ATPase copper transporting beta ISO RGD PMID:9920665 RGD:1599396 NCBI chrNW_004955431:5,228,395...5,297,120
Ensembl chrNW_004955431:5,229,126...5,269,616
JBrowse link
G Bdnf brain derived neurotrophic factor ISO (PMID:23785138) UniProtKB PMID:23785138 NCBI chrNW_004955476:6,773,244...6,822,201
Ensembl chrNW_004955476:6,772,088...6,822,588
JBrowse link
G Bhlhe40 basic helix-loop-helix family member e40 ISO PMID:12397359
(PMID:28797635)
(PMID:15038852), (PMID:19786558)
UniProt
UniProtKB
PMID:12397359, PMID:15038852, PMID:19786558, PMID:28797635 RGD:625726 NCBI chrNW_004955421:8,463,337...8,468,877
Ensembl chrNW_004955421:8,463,018...8,468,877
JBrowse link
G Bhlhe41 basic helix-loop-helix family member e41 ISO PMID:12397359
(PMID:15038852), (PMID:19786558)
UniProt
UniProtKB
PMID:12397359, PMID:15038852, PMID:19786558 RGD:625726 NCBI chrNW_004955413:21,100,021...21,103,358 JBrowse link
G Cdk4 cyclin dependent kinase 4 ISO RGD PMID:11598123 RGD:70761 NCBI chrNW_004955458:5,457,927...5,460,718
Ensembl chrNW_004955458:5,453,732...5,460,718
JBrowse link
G Cldn4 claudin 4 ISO RGD PMID:20091493 RGD:8693638 NCBI chrNW_004955456:13,961,743...13,965,498
Ensembl chrNW_004955456:13,962,497...13,963,126
JBrowse link
G Clock clock circadian regulator ISO (MGI:MGI:2669067|PMID:12897057)
(MGI:MGI:2179885|PMID:12024206), (MGI:MGI:66027|PMID:8171325)
(PMID:14645221)
MGI
RGD
UniProtKB
PMID:8171325, PMID:10471199, PMID:12024206, PMID:12897057, PMID:14645221 MGI:MGI:2179885, MGI:MGI:2669067, MGI:MGI:66027, RGD:10401879 NCBI chrNW_004955447:15,394,496...15,537,969
Ensembl chrNW_004955447:15,454,630...15,530,906
JBrowse link
G Creb1 cAMP responsive element binding protein 1 ISO (MGI:MGI:5567906|PMID:20852621) UniProtKB
RGD
PMID:20852621, PMID:21367864 MGI:MGI:5567906, RGD:7247438 NCBI chrNW_004955457:7,424,403...7,490,630
Ensembl chrNW_004955457:7,431,736...7,491,149
JBrowse link
G Crem cAMP responsive element modulator ISO (PMID:23443664) UniProtKB PMID:23443664 NCBI chrNW_004955462:2,491,504...2,547,587
Ensembl chrNW_004955462:2,491,504...2,536,385
JBrowse link
G Crx cone-rod homeobox ISO RGD PMID:9465110 RGD:1600977 NCBI chrNW_004955574:1,544,917...1,548,912
Ensembl chrNW_004955574:1,544,917...1,548,912
JBrowse link
G Cry1 cryptochrome circadian regulator 1 ISO (PMID:23133559)
(MGI:MGI:2179885|PMID:12024206)
(MGI:MGI:2667759|PMID:12843397)
(MGI:MGI:3703208|PMID:17264215), (MGI:MGI:6294193|PMID:29561690)
UniProtKB
MGI
PMID:12024206, PMID:12843397, PMID:17264215, PMID:23133559, PMID:29561690 MGI:MGI:2179885, MGI:MGI:2667759, MGI:MGI:3703208, MGI:MGI:6294193 NCBI chrNW_004955405:40,878,227...40,941,664
Ensembl chrNW_004955405:40,874,322...40,941,664
JBrowse link
G Cry2 cryptochrome circadian regulator 2 ISO (MGI:MGI:2179885|PMID:12024206)
(MGI:MGI:3703208|PMID:17264215), (MGI:MGI:4461092|PMID:20123978), (MGI:MGI:6294193|PMID:29561690)
RGD
MGI
PMID:11804325, PMID:12024206, PMID:17264215, PMID:20123978, PMID:29561690 MGI:MGI:2179885, MGI:MGI:3703208, MGI:MGI:4461092, MGI:MGI:6294193, RGD:632584 NCBI chrNW_004955422:2,084,020...2,114,980
Ensembl chrNW_004955422:2,083,138...2,115,072
JBrowse link
G Ddc dopa decarboxylase ISO RGD PMID:12047348 RGD:727571 NCBI chrNW_004955456:3,513,779...3,582,851
Ensembl chrNW_004955456:3,513,042...3,582,911
JBrowse link
G Ddx5 DEAD-box helicase 5 ISO (MGI:MGI:5430667|PMID:22767893) MGI PMID:22767893 MGI:MGI:5430667 NCBI chrNW_004955478:7,367,049...7,375,043
Ensembl chrNW_004955478:7,366,956...7,376,358
JBrowse link
G Dhx9 DExH-box helicase 9 ISO (MGI:MGI:5430667|PMID:22767893) MGI PMID:22767893 MGI:MGI:5430667 NCBI chrNW_004955406:21,697,813...21,743,551
Ensembl chrNW_004955406:21,697,813...21,745,011
JBrowse link
G Dpyd dihydropyrimidine dehydrogenase ISO RGD PMID:3202908, PMID:8504424, PMID:19628084 RGD:11251745, RGD:1599793, RGD:5133425 NCBI chrNW_004955435:2,007,185...2,800,907
Ensembl chrNW_004955435:2,007,185...2,766,138
JBrowse link
G Drd4 dopamine receptor D4 ISO RGD PMID:18778704 RGD:7175073 NCBI chrNW_004955476:11,424,347...11,426,962
Ensembl chrNW_004955476:11,424,411...11,426,960
JBrowse link
G Dyrk1a dual specificity tyrosine phosphorylation regulated kinase 1A ISO (MGI:MGI:4461092|PMID:20123978) UniProtKB PMID:20123978 MGI:MGI:4461092 NCBI chrNW_004955407:36,456,628...36,588,940
Ensembl chrNW_004955407:36,453,098...36,589,382
JBrowse link
G Egfr epidermal growth factor receptor ISO RGD PMID:12454858 RGD:2289959 NCBI chrNW_004955456:321,222...456,431 JBrowse link
G Egr1 early growth response 1 ISO RGD PMID:21363938 RGD:5131656 NCBI chrNW_004955418:2,001,509...2,005,269
Ensembl chrNW_004955418:2,002,699...2,005,007
JBrowse link
G Ep300 E1A binding protein p300 ISO (MGI:MGI:5559671|PMID:14645221) UniProtKB PMID:14645221 MGI:MGI:5559671 NCBI chrNW_004955413:26,647,553...26,727,875
Ensembl chrNW_004955413:26,648,339...26,727,933
JBrowse link
G Erbb3 erb-b2 receptor tyrosine kinase 3 ISO RGD PMID:12454858 RGD:2289959 NCBI chrNW_004955458:3,683,126...3,701,752
Ensembl chrNW_004955458:3,683,126...3,702,978
JBrowse link
G F7 coagulation factor VII ISO RGD PMID:2607889 RGD:2312319 NCBI chrNW_004955404:685,170...692,797
Ensembl chrNW_004955404:680,594...693,665
JBrowse link
G Fas Fas cell surface death receptor ISO (PMID:23785138) UniProtKB PMID:23785138 NCBI chrNW_004955425:3,961,671...3,987,513
Ensembl chrNW_004955425:3,961,013...3,987,455
JBrowse link
G Fosl2 FOS like 2, AP-1 transcription factor subunit ISO RGD PMID:10987819, PMID:21367864 RGD:2293795, RGD:7247438 NCBI chrNW_004955469:10,297,179...10,319,180
Ensembl chrNW_004955469:10,297,179...10,319,180
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta ISO (MGI:MGI:4461092|PMID:20123978) UniProtKB PMID:20123978 MGI:MGI:4461092 NCBI chrNW_004955427:19,489,972...19,671,137
Ensembl chrNW_004955427:19,495,422...19,671,137
JBrowse link
G Hdac1 histone deacetylase 1 ISO (MGI:MGI:5568140|PMID:24736997) UniProtKB PMID:24736997 MGI:MGI:5568140 NCBI chrNW_004955452:10,636,366...10,668,873
Ensembl chrNW_004955452:10,636,366...10,670,864
JBrowse link
G Hmgb1 high mobility group box 1 ISO RGD PMID:17226794 RGD:2316777 NCBI chrNW_004955431:15,373,207...15,377,339 JBrowse link
G Hnrnpl heterogeneous nuclear ribonucleoprotein L ISO RGD PMID:15798208 RGD:9854643 NCBI chrNW_004955468:668,177...683,540
Ensembl chrNW_004955468:670,559...683,540
JBrowse link
G Hnrnpr heterogeneous nuclear ribonucleoprotein R ISO RGD PMID:15798208 RGD:9854643 NCBI chrNW_004955452:3,318,536...3,354,725
Ensembl chrNW_004955452:3,315,133...3,355,508
JBrowse link
G Homer1 homer scaffold protein 1 ISO RGD PMID:15308308 RGD:2316907 NCBI chrNW_004955425:21,644,577...21,774,843
Ensembl chrNW_004955425:21,644,571...21,775,735
JBrowse link
G Hs3st2 heparan sulfate-glucosamine 3-sulfotransferase 2 ISO RGD PMID:12601002 RGD:1299550 NCBI chrNW_004955493:1,451,960...1,545,156
Ensembl chrNW_004955493:1,451,905...1,545,197
JBrowse link
G Id1 inhibitor of DNA binding 1, HLH protein ISO (PMID:19217292) UniProtKB PMID:19217292 NCBI chrNW_004955422:29,337,969...29,339,178
Ensembl chrNW_004955422:29,337,757...29,339,178
JBrowse link
G Id2 inhibitor of DNA binding 2 ISO (PMID:19217292), (PMID:19740747) UniProtKB PMID:19217292, PMID:19740747 NCBI chrNW_004955487:878,326...880,783
Ensembl chrNW_004955487:878,326...880,783
JBrowse link
G Id3 inhibitor of DNA binding 3, HLH protein ISO (PMID:19217292) UniProtKB PMID:19217292 NCBI chrNW_004955452:3,537,352...3,538,921
Ensembl chrNW_004955452:3,537,021...3,560,954
JBrowse link
G Id4 inhibitor of DNA binding 4, HLH protein ISO (PMID:19217292) UniProtKB PMID:19217292 NCBI chrNW_004955483:6,598,804...6,601,496
Ensembl chrNW_004955483:6,600,867...6,602,564
JBrowse link
G Igf1 insulin like growth factor 1 ISO (PMID:20685873) UniProtKB PMID:20685873 NCBI chrNW_004955405:37,505,830...37,582,152
Ensembl chrNW_004955405:37,512,201...37,582,152
JBrowse link
G Impdh2 inosine monophosphate dehydrogenase 2 ISO (PMID:28985504) UniProtKB PMID:28985504 NCBI chrNW_004955532:1,047,138...1,051,980
Ensembl chrNW_004955532:1,045,833...1,051,978
JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:10987819 RGD:2293795 NCBI chrNW_004955464:1,107,598...1,110,326 JBrowse link
G Jund JunD proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:10987819 RGD:2293795 NCBI chrNW_004955524:3,176,849...3,177,936 JBrowse link
G Kcnh7 potassium voltage-gated channel subfamily H member 7 ISO RGD PMID:17322986 RGD:2314391 NCBI chrNW_004955449:11,052,767...11,495,193
Ensembl chrNW_004955449:11,052,777...11,491,379
JBrowse link
G Kcnma1 potassium calcium-activated channel subfamily M alpha 1 ISO (MGI:MGI:3654773|PMID:16845385) MGI PMID:16845385 MGI:MGI:3654773 NCBI chrNW_004955437:14,749,808...15,457,274
Ensembl chrNW_004955437:14,749,914...15,454,028
JBrowse link
G Klf10 Kruppel like factor 10 ISO (PMID:20070857) UniProtKB PMID:20070857 NCBI chrNW_004955417:27,165,146...27,168,604
Ensembl chrNW_004955417:27,164,839...27,168,604
JBrowse link
G Klf9 Kruppel like factor 9 ISO (PMID:22711835) UniProtKB PMID:22711835 NCBI chrNW_004955434:2,685,416...2,716,669
Ensembl chrNW_004955434:2,685,416...2,716,669
JBrowse link
G Lep leptin ISO RGD PMID:21164040 RGD:5128545 NCBI chrNW_004955479:9,266,604...9,276,568
Ensembl chrNW_004955479:9,274,516...9,279,472
JBrowse link
G Lgr4 leucine rich repeat containing G protein-coupled receptor 4 ISO (PMID:24353284) UniProtKB PMID:24353284 NCBI chrNW_004955476:6,611,102...6,629,294
Ensembl chrNW_004955476:6,610,103...6,629,264
JBrowse link
G Lipc lipase C, hepatic type ISO plasma hepatic lipase activity RGD PMID:9728079 RGD:2307452 NCBI chrNW_004955450:15,947,869...16,062,449
Ensembl chrNW_004955450:15,948,187...16,048,766
JBrowse link
G LOC102022645 25-hydroxycholesterol 7-alpha-hydroxylase ISO RGD PMID:12759897 RGD:1298869 NCBI chrNW_004955444:14,274,818...14,446,068
Ensembl chrNW_004955444:14,275,345...14,444,426
JBrowse link
G Mat2a methionine adenosyltransferase 2A ISO RGD PMID:15504733 RGD:1598692 NCBI chrNW_004955424:1,953,623...1,961,164
Ensembl chrNW_004955424:1,953,623...1,961,164
JBrowse link
G Mettl3 methyltransferase like 3 ISO (MGI:MGI:5527005|PMID:24209618) UniProtKB PMID:24209618 MGI:MGI:5527005 NCBI chrNW_004955550:2,211,270...2,227,715
Ensembl chrNW_004955550:2,211,270...2,227,715
JBrowse link
G Mtnr1a melatonin receptor 1A ISO RGD PMID:23895529 RGD:9686056 NCBI chrNW_004955403:22,636,212...22,658,566
Ensembl chrNW_004955403:22,636,212...22,658,566
JBrowse link
G Mttp microsomal triglyceride transfer protein ISO (PMID:24353284) UniProtKB PMID:24353284 NCBI chrNW_004955496:7,963,323...8,022,393
Ensembl chrNW_004955496:7,963,262...8,009,838
JBrowse link
G Nampt nicotinamide phosphoribosyltransferase ISO (PMID:19299583) UniProtKB
RGD
PMID:19299583, PMID:26547053 RGD:13781893 NCBI chrNW_004955410:10,717,664...10,742,109
Ensembl chrNW_004955410:10,717,664...10,751,177
JBrowse link
G Ncoa2 nuclear receptor coactivator 2 ISO (PMID:24529706) UniProtKB PMID:24529706 NCBI chrNW_004955444:9,313,748...9,587,109
Ensembl chrNW_004955444:9,313,447...9,584,913
JBrowse link
G Ndufa9 NADH:ubiquinone oxidoreductase subunit A9 ISO (PMID:28985504) UniProtKB PMID:28985504 NCBI chrNW_004955413:2,435,717...2,475,158
Ensembl chrNW_004955413:2,435,775...2,475,331
JBrowse link
G Ngf nerve growth factor ISO (PMID:23785138) UniProtKB PMID:23785138 NCBI chrNW_004955435:18,581,889...18,633,330
Ensembl chrNW_004955435:18,581,808...18,601,059
JBrowse link
G Ngfr nerve growth factor receptor ISO (PMID:23785138) UniProtKB PMID:23785138 NCBI chrNW_004955451:12,030,303...12,047,305
Ensembl chrNW_004955451:12,030,252...12,047,305
JBrowse link
G Nkx2-1 NK2 homeobox 1 ISO PMID:22356123 UniProt PMID:22356123 RGD:8661632 NCBI chrNW_004955409:24,612,490...24,616,360
Ensembl chrNW_004955409:24,612,635...24,616,430
JBrowse link
G Noct nocturnin ISO (PMID:20685873), (PMID:22073225) UniProtKB PMID:20685873, PMID:22073225 NCBI chrNW_004955428:4,559,027...4,580,013 JBrowse link
G Nono non-POU domain containing octamer binding ISO PMID:15860628 UniProt PMID:15860628 RGD:1579815 NCBI chrNW_004955475:10,833,514...10,853,460
Ensembl chrNW_004955475:10,833,189...10,853,519
JBrowse link
G Nos2 nitric oxide synthase 2 ISO (PMID:22073225) UniProtKB PMID:22073225 NCBI chrNW_004955481:5,197,957...5,232,406
Ensembl chrNW_004955481:5,201,234...5,231,961
JBrowse link
G Npas2 neuronal PAS domain protein 2 ISO (PMID:14645221) UniProtKB PMID:14645221 NCBI chrNW_004955470:6,826,541...6,906,814
Ensembl chrNW_004955470:6,831,992...6,905,679
JBrowse link
G Nr0b2 nuclear receptor subfamily 0 group B member 2 ISO (PMID:28797635) UniProt PMID:28797635 NCBI chrNW_004955452:6,251,047...6,253,541
Ensembl chrNW_004955452:6,250,889...6,254,541
JBrowse link
G Nr1d1 nuclear receptor subfamily 1 group D member 1 ISO (MGI:MGI:2183702|PMID:12150932)
(PMID:14645221)
MGI
RGD
UniProtKB
PMID:12150932, PMID:14645221, PMID:24144766 MGI:MGI:2183702, RGD:10448984 NCBI chrNW_004955451:14,743,763...14,750,903
Ensembl chrNW_004955451:14,742,735...14,750,999
JBrowse link
G Nr3c1 nuclear receptor subfamily 3 group C member 1 ISO RGD PMID:16673181 RGD:4892105 NCBI chrNW_004955415:10,494,704...10,585,778
Ensembl chrNW_004955415:10,494,640...10,586,221
JBrowse link
G Nrip1 nuclear receptor interacting protein 1 ISO (PMID:21628546) UniProtKB PMID:21628546 NCBI chrNW_004955407:16,740,253...16,820,297
Ensembl chrNW_004955407:16,740,253...16,820,297
JBrowse link
G Nrxn1 neurexin 1 ISO RGD PMID:22662246 RGD:13207344 NCBI chrNW_004955441:16,230,977...17,178,003
Ensembl chrNW_004955441:16,234,070...17,178,005
JBrowse link
G Ntrk1 neurotrophic receptor tyrosine kinase 1 ISO (PMID:23785138) UniProtKB PMID:23785138 NCBI chrNW_004955545:2,929,704...2,947,579
Ensembl chrNW_004955545:2,929,704...2,947,579
JBrowse link
G Ntrk2 neurotrophic receptor tyrosine kinase 2 ISO (PMID:23785138) UniProtKB PMID:23785138 NCBI chrNW_004955432:2,284,283...2,629,631
Ensembl chrNW_004955432:2,288,898...2,630,878
JBrowse link
G Ntrk3 neurotrophic receptor tyrosine kinase 3 ISO (PMID:23785138) UniProtKB PMID:23785138 NCBI chrNW_004955416:16,652,931...17,018,188
Ensembl chrNW_004955416:16,652,791...17,018,188
JBrowse link
G Pax4 paired box 4 ISO RGD PMID:19012751 RGD:2311636 NCBI chrNW_004955479:8,660,089...8,664,463
Ensembl chrNW_004955479:8,660,089...8,664,463
JBrowse link
G Pdia3 protein disulfide isomerase family A member 3 ISO RGD PMID:16375900 RGD:9999182 NCBI chrNW_004955416:10,197,957...10,221,104
Ensembl chrNW_004955416:10,198,099...10,220,792
JBrowse link
G Per1 period circadian regulator 1 ISO (PMID:14645221), (PMID:15038852), (PMID:19740747), (PMID:20106950), (PMID:23133559), (PMID:23443664), (PMID:23785138)
PMID:15094047
UniProtKB
UniProt
RGD
PMID:11122332, PMID:12176169, PMID:14645221, PMID:15038852, PMID:15094047, PMID:19740747, PMID:20106950, PMID:23133559, PMID:23443664, PMID:23785138 RGD:1299576, RGD:631234, RGD:8554359 NCBI chrNW_004955467:8,798,436...8,813,369
Ensembl chrNW_004955467:8,797,912...8,813,365
JBrowse link
G Per2 period circadian regulator 2 ISO (PMID:14645221), (PMID:19217292), (PMID:19740747), (PMID:23785138)
PMID:15094047
(MGI:MGI:2667759|PMID:12843397)
UniProtKB
UniProt
MGI
RGD
PMID:9765215, PMID:9878515, PMID:12843397, PMID:14645221, PMID:15094047, PMID:19217292, PMID:19740747, PMID:23785138 MGI:MGI:2667759, RGD:10043346, RGD:61691, RGD:8554359 NCBI chrNW_004955542:2,331,547...2,369,011
Ensembl chrNW_004955542:2,338,099...2,371,274
JBrowse link
G Per3 period circadian regulator 3 ISO (MGI:MGI:2667759|PMID:12843397) MGI PMID:12843397 MGI:MGI:2667759 NCBI chrNW_004955486:5,058,602...5,101,480
Ensembl chrNW_004955486:5,059,773...5,101,637
JBrowse link
G Phlpp1 PH domain and leucine rich repeat protein phosphatase 1 ISO RGD PMID:10570941 RGD:633914 NCBI chrNW_004955402:46,563,918...46,773,349
Ensembl chrNW_004955402:46,666,599...46,772,387
JBrowse link
G Prf1 perforin 1 ISO RGD PMID:16309885 RGD:1599931 NCBI chrNW_004955437:20,700,912...20,705,076
Ensembl chrNW_004955437:20,700,718...20,706,929
JBrowse link
G Prkg2 protein kinase cGMP-dependent 2 ISO (MGI:MGI:3630244|PMID:12725729) MGI PMID:12725729 MGI:MGI:3630244 NCBI chrNW_004955433:5,286,594...5,387,571
Ensembl chrNW_004955433:5,286,153...5,491,924
JBrowse link
G Prl prolactin ISO RGD PMID:17726143 RGD:1642564 NCBI chrNW_004955483:4,495,257...4,503,377 JBrowse link
G Prok2 prokineticin 2 ISO (MGI:MGI:2179885|PMID:12024206) MGI PMID:12024206 MGI:MGI:2179885 NCBI chrNW_004955421:16,325,519...16,339,458
Ensembl chrNW_004955421:16,325,519...16,337,980
JBrowse link
G Prokr2 prokineticin receptor 2 ISO (MGI:MGI:2179885|PMID:12024206) MGI PMID:12024206 MGI:MGI:2179885 NCBI chrNW_004955415:15,867,017...15,878,471
Ensembl chrNW_004955415:15,866,554...15,878,582
JBrowse link
G Prox1 prospero homeobox 1 ISO (PMID:23723244) UniProtKB PMID:23723244 NCBI chrNW_004955406:3,715,140...3,770,019
Ensembl chrNW_004955406:3,719,972...3,770,555
JBrowse link
G Rora RAR related orphan receptor A ISO RGD PMID:15781226 RGD:2325957 NCBI chrNW_004955450:14,262,199...14,434,611
Ensembl chrNW_004955450:14,262,190...14,425,233
JBrowse link
G Rorb RAR related orphan receptor B ISO RGD PMID:15781226, PMID:18321474 RGD:2301031, RGD:2325957 NCBI chrNW_004955512:4,362,287...4,541,432
Ensembl chrNW_004955512:4,362,287...4,541,445
JBrowse link
G Rorc RAR related orphan receptor C ISO RGD PMID:15781226 RGD:2325957 NCBI chrNW_004955589:590,653...616,784
Ensembl chrNW_004955589:590,743...616,694
JBrowse link
G Rpe65 retinoid isomerohydrolase RPE65 ISO RGD PMID:12742352 RGD:9585648 NCBI chrNW_004955423:23,184,326...23,208,206
Ensembl chrNW_004955423:23,183,937...23,208,282
JBrowse link
G Setx senataxin ISO (MGI:MGI:5430667|PMID:22767893) MGI PMID:22767893 MGI:MGI:5430667 NCBI chrNW_004955513:1,718,432...1,776,133
Ensembl chrNW_004955513:1,718,377...1,777,021
JBrowse link
G Sftpb surfactant protein B ISO RGD PMID:12872443 RGD:4143473 NCBI chrNW_004955424:1,849,313...1,858,087
Ensembl chrNW_004955424:1,849,314...1,858,087
JBrowse link
G Sftpc surfactant protein C ISO RGD PMID:12872443 RGD:4143473 NCBI chrNW_004955403:45,649,149...45,651,421
Ensembl chrNW_004955403:45,649,122...45,651,837
JBrowse link
G Sirt1 sirtuin 1 ISO (PMID:18662546) UniProtKB PMID:18662546 NCBI chrNW_004955425:20,280,725...20,307,663
Ensembl chrNW_004955425:20,279,963...20,307,663
JBrowse link
G Slc4a1 solute carrier family 4 member 1 (Diego blood group) ISO RGD PMID:21903759 RGD:10450532 NCBI chrNW_004955451:17,318,600...17,330,943
Ensembl chrNW_004955451:17,315,024...17,328,103
JBrowse link
G Slc6a4 solute carrier family 6 member 4 ISO RGD PMID:18482738 RGD:4889508 NCBI chrNW_004955481:3,088,440...3,122,421
Ensembl chrNW_004955481:3,088,416...3,125,711
JBrowse link
G Slc9a3 solute carrier family 9 member A3 ISO RGD PMID:15780093 RGD:1581376 NCBI chrNW_004955504:226,192...260,632
Ensembl chrNW_004955504:228,049...260,650
JBrowse link
G Srebf1 sterol regulatory element binding transcription factor 1 ISO (PMID:19786558) UniProtKB PMID:19786558 NCBI chrNW_004955577:171,425...183,669
Ensembl chrNW_004955577:171,425...186,046
JBrowse link
G Star steroidogenic acute regulatory protein ISO RGD PMID:19190255 RGD:4145635 NCBI chrNW_004955463:13,760,089...13,765,245
Ensembl chrNW_004955463:13,760,089...13,765,244
JBrowse link
G Syncrip synaptotagmin binding cytoplasmic RNA interacting protein ISO RGD PMID:15798208 RGD:9854643 NCBI chrNW_004955411:13,068,078...13,096,936
Ensembl chrNW_004955411:13,066,789...13,096,938
JBrowse link
G Thrap3 thyroid hormone receptor associated protein 3 ISO (PMID:24043798) UniProtKB PMID:24043798 NCBI chrNW_004955452:14,233,155...14,282,521
Ensembl chrNW_004955452:14,233,155...14,283,886
JBrowse link
G Timeless timeless circadian regulator ISO (PMID:10231394), (PMID:23418588) UniProtKB PMID:10231394, PMID:23418588 NCBI chrNW_004955458:3,999,143...4,029,523
Ensembl chrNW_004955458:3,997,725...4,029,766
JBrowse link
G Tnf tumor necrosis factor ISO RGD PMID:9483199 RGD:11552588 NCBI chrNW_004955437:117,267...119,899
Ensembl chrNW_004955437:117,206...120,700
JBrowse link
G Top1 DNA topoisomerase I ISO (PMID:22904072) UniProtKB PMID:22904072 NCBI chrNW_004955445:15,834,017...15,922,785
Ensembl chrNW_004955445:15,834,017...15,922,785
JBrowse link
G Tp53 tumor protein p53 ISO (PMID:24051492) UniProtKB PMID:24051492 NCBI chrNW_004955467:9,241,391...9,256,716
Ensembl chrNW_004955467:9,252,130...9,255,928
JBrowse link
G Tph1 tryptophan hydroxylase 1 ISO RGD PMID:18705647 RGD:5686363 NCBI chrNW_004955414:32,803,417...32,828,682
Ensembl chrNW_004955414:32,800,477...32,828,501
JBrowse link
G Tph2 tryptophan hydroxylase 2 ISO RGD PMID:15194882 RGD:2317079 NCBI chrNW_004955405:11,877,474...11,981,035
Ensembl chrNW_004955405:11,886,206...11,982,550
JBrowse link
G Tyms thymidylate synthetase ISO RGD PMID:19628084 RGD:5133425 NCBI chrNW_004955402:9,295,862...9,304,952
Ensembl chrNW_004955402:9,296,321...9,306,631
JBrowse link
circadian sleep/wake cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahcy adenosylhomocysteinase ISO RGD PMID:8330191 RGD:1598901 NCBI chrNW_004955422:26,992,295...27,013,100
Ensembl chrNW_004955422:26,992,295...27,013,100
JBrowse link
G Npas2 neuronal PAS domain protein 2 ISO (MGI:MGI:2667759|PMID:12843397) MGI PMID:12843397 MGI:MGI:2667759 NCBI chrNW_004955470:6,826,541...6,906,814
Ensembl chrNW_004955470:6,831,992...6,905,679
JBrowse link
G Th tyrosine hydroxylase ISO RGD PMID:20980612 RGD:5128829 NCBI chrNW_004955422:13,943,590...13,951,102
Ensembl chrNW_004955422:13,943,552...13,951,137
JBrowse link
circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Btbd9 BTB domain containing 9 ISO (MGI:MGI:5436392|PMID:22678064) MGI PMID:22678064 MGI:MGI:5436392 NCBI chrNW_004955437:4,765,234...5,145,033 JBrowse link
G Ghrh growth hormone releasing hormone ISO RGD PMID:17537840 RGD:2289986 NCBI chrNW_004955422:24,481,246...24,490,529 JBrowse link
circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cst3 cystatin C ISO RGD PMID:17027151 RGD:2306498 NCBI chrNW_004955415:30,507,972...30,512,109 JBrowse link
G Gabrb3 gamma-aminobutyric acid type A receptor beta3 subunit ISO (MGI:MGI:2445919|PMID:12419540) MGI PMID:12419540 MGI:MGI:2445919 NCBI chrNW_004955533:2,879,437...2,938,952
Ensembl chrNW_004955533:2,573,599...2,938,952
JBrowse link
G Prkaca protein kinase cAMP-activated catalytic subunit alpha ISO RGD PMID:20844122 RGD:13515123 NCBI chrNW_004955415:32,794,172...32,807,944
Ensembl chrNW_004955415:32,793,718...32,812,930
JBrowse link
G Srd5a1 steroid 5 alpha-reductase 1 ISO deprivation RGD PMID:12597996 RGD:4891963 NCBI chrNW_004955504:4,360,909...4,388,964
Ensembl chrNW_004955504:4,360,453...4,391,133
JBrowse link
G Star steroidogenic acute regulatory protein ISO deprivation RGD PMID:12597996 RGD:4891963 NCBI chrNW_004955463:13,760,089...13,765,245
Ensembl chrNW_004955463:13,760,089...13,765,244
JBrowse link
circadian temperature homeostasis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egr1 early growth response 1 ISO (MGI:MGI:6258624|PMID:29138967) UniProt PMID:29138967 MGI:MGI:6258624 NCBI chrNW_004955418:2,001,509...2,005,269
Ensembl chrNW_004955418:2,002,699...2,005,007
JBrowse link
G Nr1d1 nuclear receptor subfamily 1 group D member 1 ISO (MGI:MGI:5527011|PMID:24162845) UniProtKB PMID:24162845 MGI:MGI:5527011 NCBI chrNW_004955451:14,743,763...14,750,903
Ensembl chrNW_004955451:14,742,735...14,750,999
JBrowse link
G Tnfrsf11a TNF receptor superfamily member 11a ISO (MGI:MGI:4413614|PMID:19940926) BHF-UCL PMID:19940926 MGI:MGI:4413614 NCBI chrNW_004955402:46,242,329...46,298,157
Ensembl chrNW_004955402:46,264,164...46,296,368
JBrowse link
entrainment of circadian clock term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atoh7 atonal bHLH transcription factor 7 ISO (MGI:MGI:2445865|PMID:12451142) MGI PMID:12451142 MGI:MGI:2445865 NCBI chrNW_004955425:20,559,466...20,560,275 JBrowse link
G Chrm1 cholinergic receptor muscarinic 1 ISO (PMID:12196552) AgBase PMID:12196552 NCBI chrNW_004955599:349,744...356,714
Ensembl chrNW_004955599:349,744...356,714
JBrowse link
G Clock clock circadian regulator ISO RGD PMID:10095082 RGD:632379 NCBI chrNW_004955447:15,394,496...15,537,969
Ensembl chrNW_004955447:15,454,630...15,530,906
JBrowse link
G Id2 inhibitor of DNA binding 2 ISO (MGI:MGI:3838062|PMID:19217292) MGI PMID:19217292 MGI:MGI:3838062 NCBI chrNW_004955487:878,326...880,783
Ensembl chrNW_004955487:878,326...880,783
JBrowse link
G Phlpp1 PH domain and leucine rich repeat protein phosphatase 1 ISO (MGI:MGI:4420841|PMID:20080691) MGI PMID:20080691 MGI:MGI:4420841 NCBI chrNW_004955402:46,563,918...46,773,349
Ensembl chrNW_004955402:46,666,599...46,772,387
JBrowse link
G Sox14 SRY-box transcription factor 14 ISO (MGI:MGI:5440343|PMID:22920256) MGI PMID:22920256 MGI:MGI:5440343 NCBI chrNW_004955501:1,155,920...1,157,870
Ensembl chrNW_004955501:1,156,670...1,157,392
JBrowse link
entrainment of circadian clock by photoperiod term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atoh7 atonal bHLH transcription factor 7 ISO (MGI:MGI:5699646|PMID:26392540) UniProt PMID:26392540 MGI:MGI:5699646 NCBI chrNW_004955425:20,559,466...20,560,275 JBrowse link
G Bhlhe40 basic helix-loop-helix family member e40 ISO (MGI:MGI:3798698|PMID:18411297) BHF-UCL PMID:18411297 MGI:MGI:3798698 NCBI chrNW_004955421:8,463,337...8,468,877
Ensembl chrNW_004955421:8,463,018...8,468,877
JBrowse link
G Crtc1 CREB regulated transcription coactivator 1 ISO (MGI:MGI:5532783|PMID:23993098) UniProtKB PMID:23993098 MGI:MGI:5532783 NCBI chrNW_004955524:2,884,654...2,940,601
Ensembl chrNW_004955524:2,884,654...2,940,815
JBrowse link
G Cry1 cryptochrome circadian regulator 1 ISO (MGI:MGI:5490394|PMID:23616524) UniProtKB PMID:23616524 MGI:MGI:5490394 NCBI chrNW_004955405:40,878,227...40,941,664
Ensembl chrNW_004955405:40,874,322...40,941,664
JBrowse link
G Cry2 cryptochrome circadian regulator 2 ISO (MGI:MGI:5490394|PMID:23616524) UniProtKB PMID:23616524 MGI:MGI:5490394 NCBI chrNW_004955422:2,084,020...2,114,980
Ensembl chrNW_004955422:2,083,138...2,115,072
JBrowse link
G Fbxl21 F-box and leucine rich repeat protein 21 ISO (MGI:MGI:5470183|PMID:23452855), (MGI:MGI:5487698|PMID:23452856) UniProtKB PMID:23452855, PMID:23452856 MGI:MGI:5470183, MGI:MGI:5487698 NCBI chrNW_004955408:30,997,793...31,012,276 JBrowse link
G Fbxl3 F-box and leucine rich repeat protein 3 ISO (MGI:MGI:5470183|PMID:23452855), (MGI:MGI:5487698|PMID:23452856), (MGI:MGI:5490394|PMID:23616524) UniProtKB PMID:23452855, PMID:23452856, PMID:23616524 MGI:MGI:5470183, MGI:MGI:5487698, MGI:MGI:5490394 NCBI chrNW_004955404:30,215,140...30,229,798
Ensembl chrNW_004955404:30,215,108...30,229,798
JBrowse link
G Id2 inhibitor of DNA binding 2 ISO (MGI:MGI:3838062|PMID:19217292) UniProtKB PMID:19217292 MGI:MGI:3838062 NCBI chrNW_004955487:878,326...880,783
Ensembl chrNW_004955487:878,326...880,783
JBrowse link
G Mta1 metastasis associated 1 ISO (MGI:MGI:5582861|PMID:24089055) UniProtKB PMID:24089055 MGI:MGI:5582861 NCBI chrNW_004955538:3,630,383...3,671,005
Ensembl chrNW_004955538:3,634,341...3,671,005
JBrowse link
G Nr2f6 nuclear receptor subfamily 2 group F member 6 ISO (MGI:MGI:3530176|PMID:15741322) MGI PMID:15741322 MGI:MGI:3530176 NCBI chrNW_004955524:961,232...965,012 JBrowse link
G Opn4 opsin 4 ISO (MGI:MGI:5925970|PMID:26320947) MGI PMID:26320947 MGI:MGI:5925970 NCBI chrNW_004955510:5,723,804...5,736,070
Ensembl chrNW_004955510:5,724,120...5,736,135
JBrowse link
G Opn5 opsin 5 ISO (MGI:MGI:5699646|PMID:26392540), (MGI:MGI:6376341|PMID:31607531), (MGI:MGI:6378274|PMID:30240620) UniProt PMID:26392540, PMID:30240620, PMID:31607531 MGI:MGI:5699646, MGI:MGI:6376341, MGI:MGI:6378274 NCBI chrNW_004955437:12,171,544...12,197,409
Ensembl chrNW_004955437:12,171,544...12,213,264
JBrowse link
G Pde6b phosphodiesterase 6B ISO (MGI:MGI:6378274|PMID:30240620) UniProt PMID:30240620 MGI:MGI:6378274 NCBI chrNW_004955514:234,972...279,420
Ensembl chrNW_004955514:234,972...279,420
JBrowse link
G Per1 period circadian regulator 1 ISO (MGI:MGI:3578039|PMID:15888647) UniProtKB PMID:15888647 MGI:MGI:3578039 NCBI chrNW_004955467:8,798,436...8,813,369
Ensembl chrNW_004955467:8,797,912...8,813,365
JBrowse link
G Pml PML nuclear body scaffold ISO (MGI:MGI:5314433|PMID:22274616) UniProtKB PMID:22274616 MGI:MGI:5314433 NCBI chrNW_004955450:3,654,854...3,692,057
Ensembl chrNW_004955450:3,656,498...3,692,406
JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha ISO (MGI:MGI:5086036|PMID:21712997) UniProtKB PMID:21712997 MGI:MGI:5086036 NCBI chrNW_004955422:18,076,670...18,079,859
Ensembl chrNW_004955422:18,076,670...18,079,859
JBrowse link
G Ppp1cb protein phosphatase 1 catalytic subunit beta ISO (MGI:MGI:5086036|PMID:21712997) UniProtKB PMID:21712997 MGI:MGI:5086036 NCBI chrNW_004955469:10,657,029...10,682,398
Ensembl chrNW_004955469:10,662,032...10,682,398
JBrowse link
G Ppp1cc protein phosphatase 1 catalytic subunit gamma ISO (MGI:MGI:5086036|PMID:21712997) UniProt PMID:21712997 MGI:MGI:5086036 NCBI chrNW_004955482:7,582,605...7,605,340
Ensembl chrNW_004955482:7,578,782...7,606,132
JBrowse link
G Sik1 salt inducible kinase 1 ISO (MGI:MGI:5532783|PMID:23993098) UniProtKB PMID:23993098 MGI:MGI:5532783 NCBI chrNW_004955407:38,739,062...38,749,293 JBrowse link
G Tp53 tumor protein p53 ISO (MGI:MGI:5613453|PMID:24051492) UniProtKB PMID:24051492 MGI:MGI:5613453 NCBI chrNW_004955467:9,241,391...9,256,716
Ensembl chrNW_004955467:9,252,130...9,255,928
JBrowse link
G Usp2 ubiquitin specific peptidase 2 ISO (MGI:MGI:5607210|PMID:23213472) UniProtKB PMID:23213472 MGI:MGI:5607210 NCBI chrNW_004955412:20,435,778...20,461,898
Ensembl chrNW_004955412:20,433,302...20,457,493
JBrowse link
estrous cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adnp activity dependent neuroprotector homeobox ISO RGD PMID:16023261 RGD:2312777 NCBI chrNW_004955445:7,498,223...7,530,828
Ensembl chrNW_004955445:7,492,257...7,531,862
JBrowse link
G Adrb2 adrenoceptor beta 2 ISO RGD PMID:7977723 RGD:8548523 NCBI chrNW_004955415:5,515,157...5,517,198
Ensembl chrNW_004955415:5,515,697...5,516,980
JBrowse link
G Anxa1 annexin A1 ISO RGD PMID:17283243 RGD:2306897 NCBI chrNW_004955512:5,686,508...5,703,645 JBrowse link
G Azin1 antizyme inhibitor 1 ISO RGD PMID:28315656 RGD:14700804 NCBI chrNW_004955417:27,231,695...27,259,564
Ensembl chrNW_004955417:27,231,696...27,259,564
JBrowse link
G Cckbr cholecystokinin B receptor ISO RGD PMID:17045752 RGD:2311331 NCBI chrNW_004955414:22,001,351...22,011,275
Ensembl chrNW_004955414:22,000,436...22,011,433
JBrowse link
G Clu clusterin ISO RGD PMID:11149574 RGD:9068389 NCBI chrNW_004955403:50,160,598...50,175,876
Ensembl chrNW_004955403:50,160,598...50,175,876
JBrowse link
G Egr1 early growth response 1 ISO (MGI:MGI:82584|PMID:8703054) UniProtKB PMID:8703054 MGI:MGI:82584 NCBI chrNW_004955418:2,001,509...2,005,269
Ensembl chrNW_004955418:2,002,699...2,005,007
JBrowse link
G Enpp2 ectonucleotide pyrophosphatase/phosphodiesterase 2 ISO RGD PMID:22122904 RGD:9685419 NCBI chrNW_004955417:25,308,424...25,384,307
Ensembl chrNW_004955417:25,308,361...25,384,443
JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 ISO RGD PMID:11956173 RGD:2290010 NCBI chrNW_004955451:14,442,816...14,456,009
Ensembl chrNW_004955451:14,442,816...14,459,379
JBrowse link
G Esr2 estrogen receptor 2 ISO RGD PMID:11854469 RGD:8694160 NCBI chrNW_004955466:5,587,003...5,644,765
Ensembl chrNW_004955466:5,575,088...5,638,946
JBrowse link
G Ets1 ETS proto-oncogene 1, transcription factor ISO RGD PMID:18439600 RGD:2313729 NCBI chrNW_004955412:29,433,730...29,602,389
Ensembl chrNW_004955412:29,432,482...29,545,580
JBrowse link
G Gnrh1 gonadotropin releasing hormone 1 ISO RGD PMID:9075691 RGD:9685070 NCBI chrNW_004955403:48,341,731...48,346,595
Ensembl chrNW_004955403:48,343,597...48,346,595
JBrowse link
G Has1 hyaluronan synthase 1 ISO RGD PMID:24218629 RGD:9588635 NCBI chrNW_004955558:826,853...836,809
Ensembl chrNW_004955558:826,853...836,809
JBrowse link
G Has2 hyaluronan synthase 2 ISO RGD PMID:24218629 RGD:9588635 NCBI chrNW_004955540:593,316...609,760
Ensembl chrNW_004955540:593,316...609,865
JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 ISO RGD PMID:9990085 RGD:10059328 NCBI chrNW_004955412:23,863,513...23,867,984
Ensembl chrNW_004955412:23,862,590...23,867,984
JBrowse link
G Igf1r insulin like growth factor 1 receptor ISO RGD PMID:17567960 RGD:10046043 NCBI chrNW_004955416:26,101,090...26,382,660
Ensembl chrNW_004955416:26,102,628...26,382,666
JBrowse link
G LOC102009223 cytochrome P450 1B1 ISO RGD PMID:12223220 RGD:7829740 NCBI chrNW_004955441:5,803,397...5,812,131
Ensembl chrNW_004955441:5,803,032...5,812,131
JBrowse link
G Mdk midkine ISO (MGI:MGI:3718185|PMID:17121547) UniProt PMID:17121547 MGI:MGI:3718185 NCBI chrNW_004955422:1,655,351...1,657,026
Ensembl chrNW_004955422:1,655,358...1,657,044
JBrowse link
G Mmp13 matrix metallopeptidase 13 ISO RGD PMID:8691099 RGD:10043158 NCBI chrNW_004955412:6,106,994...6,118,760
Ensembl chrNW_004955412:6,106,994...6,118,760
JBrowse link
G Mmp7 matrix metallopeptidase 7 ISO RGD PMID:10070364 RGD:9685349 NCBI chrNW_004955412:5,780,772...5,792,485
Ensembl chrNW_004955412:5,778,502...5,792,445
JBrowse link
G Muc4 mucin 4, cell surface associated ISO RGD PMID:9618151 RGD:2303752 NCBI chrNW_004955420:12,228,801...12,274,840 JBrowse link
G Ncoa1 nuclear receptor coactivator 1 ISO RGD PMID:15862975 RGD:2306462 NCBI chrNW_004955469:6,676,780...6,892,587
Ensembl chrNW_004955469:6,794,821...6,892,566
JBrowse link
G Ncor2 nuclear receptor corepressor 2 ISO RGD PMID:15862975 RGD:2306462 NCBI chrNW_004955482:4,927,482...5,031,848
Ensembl chrNW_004955482:4,942,221...5,031,904
JBrowse link
G Oprk1 opioid receptor kappa 1 ISO RGD PMID:21041644 RGD:9831449 NCBI chrNW_004955454:12,741,577...12,751,282
Ensembl chrNW_004955454:12,744,765...12,752,226
JBrowse link
G Oprl1 opioid related nociceptin receptor 1 ISO RGD PMID:12710984 RGD:9835032 NCBI chrNW_004955528:161,673...184,515
Ensembl chrNW_004955528:161,673...167,937
JBrowse link
G Oprm1 opioid receptor mu 1 ISO RGD PMID:21041644 RGD:9831449 NCBI chrNW_004955439:7,870,563...7,923,817
Ensembl chrNW_004955439:7,757,569...7,923,817
JBrowse link
G Oxtr oxytocin receptor ISO RGD PMID:12867731 RGD:2304182 NCBI chrNW_004955561:340,387...354,499
Ensembl chrNW_004955561:337,902...354,336
JBrowse link
G Pcna proliferating cell nuclear antigen ISO RGD PMID:10856886 RGD:10448987 NCBI chrNW_004955415:15,744,601...15,748,910
Ensembl chrNW_004955415:15,744,601...15,749,673
JBrowse link
G Pgr progesterone receptor ISO RGD PMID:16461543 RGD:7248717 NCBI chrNW_004955412:4,643,839...4,693,478 JBrowse link
G Ptn pleiotrophin ISO (MGI:MGI:3718185|PMID:17121547) UniProt
RGD
PMID:9846168, PMID:17121547 MGI:MGI:3718185, RGD:10044015 NCBI chrNW_004955494:5,580,264...5,681,848
Ensembl chrNW_004955494:5,580,422...5,684,190
JBrowse link
G Trpm2 transient receptor potential cation channel subfamily M member 2 ISO RGD PMID:24577155 RGD:9999435 NCBI chrNW_004955407:41,062,217...41,110,500
Ensembl chrNW_004955407:41,057,941...41,110,668
JBrowse link
G Wnt5a Wnt family member 5A ISO RGD PMID:20126574 RGD:2326233 NCBI chrNW_004955430:5,304,817...5,325,684
Ensembl chrNW_004955430:5,304,745...5,325,684
JBrowse link
follicle-stimulating hormone signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adrm1 adhesion regulating molecule 1 ISO (MGI:MGI:4849324|PMID:21048919) BHF-UCL PMID:21048919 MGI:MGI:4849324 NCBI chrNW_004955528:1,753,450...1,759,886
Ensembl chrNW_004955528:1,753,450...1,759,886
JBrowse link
G Arrb1 arrestin beta 1 ISO RGD PMID:16899567 RGD:4140424 NCBI chrNW_004955414:16,478,843...16,568,050
Ensembl chrNW_004955414:16,478,843...16,562,135
JBrowse link
G Arrb2 arrestin beta 2 ISO RGD PMID:16899567 RGD:4140424 NCBI chrNW_004955467:10,109,985...10,118,687
Ensembl chrNW_004955467:10,110,003...10,123,022
JBrowse link
G Cenpi centromere protein I ISO RGD PMID:7758824 RGD:728588 NCBI chrNW_004955503:7,237,080...7,341,702 JBrowse link
G Fshb follicle stimulating hormone subunit beta ISO (MGI:MGI:85487|PMID:9020850) MGI PMID:9020850 MGI:MGI:85487 NCBI chrNW_004955476:8,795,354...8,797,244
Ensembl chrNW_004955476:8,795,351...8,797,244
JBrowse link
G Fshr follicle stimulating hormone receptor ISO (MGI:MGI:1337390|PMID:10330114)
(PMID:11847099)
(PMID:24692546)
MGI
UniProtKB
RGD
PMID:10330114, PMID:11847099, PMID:12145341, PMID:16598027, PMID:16899567, PMID:24692546 MGI:MGI:1337390, RGD:1601255, RGD:1601258, RGD:4140424 NCBI chrNW_004955441:15,422,190...15,585,446
Ensembl chrNW_004955441:15,422,190...15,585,537
JBrowse link
G Grk2 G protein-coupled receptor kinase 2 ISO RGD PMID:16899567 RGD:4140424 NCBI chrNW_004955422:18,173,438...18,192,357
Ensembl chrNW_004955422:18,170,616...18,192,412
JBrowse link
G Myh9 myosin heavy chain 9 ISO RGD PMID:20068007 RGD:6902910 NCBI chrNW_004955413:22,881,759...22,972,182
Ensembl chrNW_004955413:22,881,045...22,972,450
JBrowse link
generation of ovulation cycle rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chrna7 cholinergic receptor nicotinic alpha 7 subunit ISO (MGI:MGI:3053480|PMID:15364017) MGI PMID:15364017 MGI:MGI:3053480 NCBI chrNW_004955416:30,687,518...30,798,700
Ensembl chrNW_004955416:30,687,478...30,798,700
JBrowse link
G Kiss1 KiSS-1 metastasis suppressor ISO RGD PMID:15976058 RGD:2292152 NCBI chrNW_004955406:40,043,139...40,045,973
Ensembl chrNW_004955406:40,043,133...40,045,386
JBrowse link
G Npy5r neuropeptide Y receptor Y5 ISO RGD PMID:12047724 RGD:1625504 NCBI chrNW_004955403:41,667,632...41,675,619
Ensembl chrNW_004955403:41,667,632...41,675,619
JBrowse link
initiation of primordial ovarian follicle growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxo3 forkhead box O3 ISO (MGI:MGI:2667256|PMID:12855809) MGI PMID:12855809 MGI:MGI:2667256 NCBI chrNW_004955411:33,655,958...33,770,829
Ensembl chrNW_004955411:33,655,958...33,770,829
JBrowse link
G Gas2 growth arrest specific 2 ISO (MGI:MGI:6102554|PMID:27734842) MGI PMID:27734842 MGI:MGI:6102554 NCBI chrNW_004955476:3,092,461...3,226,269
Ensembl chrNW_004955476:3,100,479...3,226,262
JBrowse link
locomotor rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankfn1 ankyrin repeat and fibronectin type III domain containing 1 ISO (MGI:MGI:5642309|PMID:26131556) MGI PMID:26131556 MGI:MGI:5642309 NCBI chrNW_004955451:6,269,168...6,656,763
Ensembl chrNW_004955451:6,305,394...6,571,389
JBrowse link
G Ciart circadian associated repressor of transcription ISO (MGI:MGI:5568140|PMID:24736997) UniProtKB PMID:24736997 MGI:MGI:5568140 NCBI chrNW_004955413:490,117...494,332 JBrowse link
G Egr1 early growth response 1 ISO (MGI:MGI:6258624|PMID:29138967) UniProt PMID:29138967 MGI:MGI:6258624 NCBI chrNW_004955418:2,001,509...2,005,269
Ensembl chrNW_004955418:2,002,699...2,005,007
JBrowse link
G Id2 inhibitor of DNA binding 2 ISO (MGI:MGI:3838062|PMID:19217292) UniProtKB PMID:19217292 MGI:MGI:3838062 NCBI chrNW_004955487:878,326...880,783
Ensembl chrNW_004955487:878,326...880,783
JBrowse link
G Kcnd2 potassium voltage-gated channel subfamily D member 2 ISO (MGI:MGI:5432624|PMID:22815518) UniProtKB PMID:22815518 MGI:MGI:5432624 NCBI chrNW_004955479:2,062,607...2,545,576
Ensembl chrNW_004955479:2,062,608...2,543,125
JBrowse link
G Kcnma1 potassium calcium-activated channel subfamily M alpha 1 ISO (MGI:MGI:3654773|PMID:16845385) MGI PMID:16845385 MGI:MGI:3654773 NCBI chrNW_004955437:14,749,808...15,457,274
Ensembl chrNW_004955437:14,749,914...15,454,028
JBrowse link
G Mapk10 mitogen-activated protein kinase 10 ISO (MGI:MGI:5431019|PMID:22441692) UniProt PMID:22441692 MGI:MGI:5431019 NCBI chrNW_004955474:3,451,656...3,772,405
Ensembl chrNW_004955474:3,624,679...3,772,458
JBrowse link
G Mc3r melanocortin 3 receptor ISO (MGI:MGI:3821632|PMID:19036988) UniProtKB PMID:19036988 MGI:MGI:3821632 NCBI chrNW_004955445:2,977,026...2,979,375
Ensembl chrNW_004955445:2,978,320...2,979,291
JBrowse link
G Mta1 metastasis associated 1 ISO (MGI:MGI:5582861|PMID:24089055) UniProtKB PMID:24089055 MGI:MGI:5582861 NCBI chrNW_004955538:3,630,383...3,671,005
Ensembl chrNW_004955538:3,634,341...3,671,005
JBrowse link
G Naglu N-acetyl-alpha-glucosaminidase ISO (MGI:MGI:3769195|PMID:17712420) MGI PMID:17712420 MGI:MGI:3769195 NCBI chrNW_004955451:16,445,338...16,449,243
Ensembl chrNW_004955451:16,445,338...16,450,062
JBrowse link
G Ncoa2 nuclear receptor coactivator 2 ISO (MGI:MGI:5607392|PMID:24529706) UniProtKB PMID:24529706 MGI:MGI:5607392 NCBI chrNW_004955444:9,313,748...9,587,109
Ensembl chrNW_004955444:9,313,447...9,584,913
JBrowse link
G Ncor1 nuclear receptor corepressor 1 ISO (MGI:MGI:3821398|PMID:19037247) UniProt PMID:19037247 MGI:MGI:3821398 NCBI chrNW_004955467:1,408,292...1,568,539
Ensembl chrNW_004955467:1,409,281...1,546,842
JBrowse link
G Nms neuromedin S ISO PMID:15635449 MGI PMID:15635449 RGD:1359746 NCBI chrNW_004955470:6,505,345...6,516,964
Ensembl chrNW_004955470:6,505,345...6,516,957
JBrowse link
G Npas2 neuronal PAS domain protein 2 ISO (MGI:MGI:2667759|PMID:12843397) MGI PMID:12843397 MGI:MGI:2667759 NCBI chrNW_004955470:6,826,541...6,906,814
Ensembl chrNW_004955470:6,831,992...6,905,679
JBrowse link
G Pten phosphatase and tensin homolog ISO (MGI:MGI:3759727|PMID:17706614) BHF-UCL PMID:17706614 MGI:MGI:3759727 NCBI chrNW_004955425:5,007,811...5,091,829
Ensembl chrNW_004955425:5,014,147...5,091,829
JBrowse link
G Usp2 ubiquitin specific peptidase 2 ISO (MGI:MGI:5607210|PMID:23213472) UniProtKB PMID:23213472 MGI:MGI:5607210 NCBI chrNW_004955412:20,435,778...20,461,898
Ensembl chrNW_004955412:20,433,302...20,457,493
JBrowse link
luteinization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Capn5 calpain 5 ISO RGD PMID:19415717 RGD:2313170 NCBI chrNW_004955414:14,652,578...14,706,833
Ensembl chrNW_004955414:14,651,207...14,706,887
JBrowse link
G Fzd4 frizzled class receptor 4 ISO (MGI:MGI:3692134|PMID:16093361) MGI PMID:16093361 MGI:MGI:3692134 NCBI chrNW_004955414:6,094,585...6,103,910
Ensembl chrNW_004955414:6,094,585...6,098,865
JBrowse link
G LOC102021956 alpha-2-macroglobulin ISO RGD PMID:2479532 RGD:10046034 NCBI chrNW_004955413:6,019,457...6,062,366
Ensembl chrNW_004955413:6,019,082...6,062,529
JBrowse link
G LOC102023780 aromatase ISO RGD PMID:23183184 RGD:7257725 NCBI chrNW_004955409:3,198,622...3,313,072
Ensembl chrNW_004955409:3,266,233...3,313,142
JBrowse link
G Mmp2 matrix metallopeptidase 2 ISO RGD PMID:10537164 RGD:7207086 NCBI chrNW_004955433:13,024,844...13,050,041
Ensembl chrNW_004955433:13,024,418...13,052,775
JBrowse link
G Nr5a1 nuclear receptor subfamily 5 group A member 1 ISO (MGI:MGI:3046596|PMID:15118069) MGI PMID:15118069 MGI:MGI:3046596 NCBI chrNW_004955419:3,632,248...3,654,367
Ensembl chrNW_004955419:3,632,220...3,654,375
JBrowse link
G Pdgfra platelet derived growth factor receptor alpha ISO (MGI:MGI:3820330|PMID:19056881) MGI PMID:19056881 MGI:MGI:3820330 NCBI chrNW_004955447:16,570,652...16,613,410
Ensembl chrNW_004955447:16,569,909...16,612,373
JBrowse link
G Pgr progesterone receptor ISO RGD PMID:8344215 RGD:1601291 NCBI chrNW_004955412:4,643,839...4,693,478 JBrowse link
G Plekha1 pleckstrin homology domain containing A1 ISO (MGI:MGI:3820330|PMID:19056881) MGI PMID:19056881 MGI:MGI:3820330 NCBI chrNW_004955477:659,640...730,394
Ensembl chrNW_004955477:659,641...732,627
JBrowse link
G Ptprn protein tyrosine phosphatase receptor type N ISO (MGI:MGI:3769282|PMID:16269463) UniProtKB PMID:16269463 MGI:MGI:3769282 NCBI chrNW_004955453:14,126,416...14,145,347
Ensembl chrNW_004955453:14,126,416...14,145,347
JBrowse link
G Schip1 schwannomin interacting protein 1 ISO (MGI:MGI:3820330|PMID:19056881) MGI PMID:19056881 MGI:MGI:3820330 NCBI chrNW_004955448:10,364,261...10,502,799 JBrowse link
G Sgpl1 sphingosine-1-phosphate lyase 1 ISO (MGI:MGI:3820330|PMID:19056881) MGI PMID:19056881 MGI:MGI:3820330 NCBI chrNW_004955437:20,489,641...20,547,105
Ensembl chrNW_004955437:20,488,330...20,547,171
JBrowse link
G Stat5a signal transducer and activator of transcription 5A ISO (MGI:MGI:2181561|PMID:9630227) MGI PMID:9630227 MGI:MGI:2181561 NCBI chrNW_004955451:16,305,363...16,319,219 JBrowse link
G Stat5b signal transducer and activator of transcription 5B ISO (MGI:MGI:2181561|PMID:9630227) RGD
MGI
PMID:9630227, PMID:10598581 MGI:MGI:2181561, RGD:1601386 NCBI chrNW_004955451:16,253,645...16,295,337 JBrowse link
luteolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Casp2 caspase 2 ISO RGD PMID:16940287 RGD:4107077 NCBI chrNW_004955494:353,572...369,207
Ensembl chrNW_004955494:353,310...368,873
JBrowse link
G Casp3 caspase 3 ISO RGD PMID:25332219 RGD:13782179 NCBI chrNW_004955403:24,315,712...24,326,271 JBrowse link
G Ddit3 DNA damage inducible transcript 3 ISO RGD PMID:25332219 RGD:13782179 NCBI chrNW_004955458:5,232,979...5,238,513
Ensembl chrNW_004955458:5,232,979...5,238,513
JBrowse link
G Hspa5 heat shock protein family A (Hsp70) member 5 ISO RGD PMID:25332219 RGD:13782179 NCBI chrNW_004955419:3,055,420...3,060,208
Ensembl chrNW_004955419:3,055,420...3,062,131
JBrowse link
G Mmp13 matrix metallopeptidase 13 ISO RGD PMID:10537164 RGD:7207086 NCBI chrNW_004955412:6,106,994...6,118,760
Ensembl chrNW_004955412:6,106,994...6,118,760
JBrowse link
G Mmp19 matrix metallopeptidase 19 ISO RGD PMID:15286033 RGD:1642024 NCBI chrNW_004955458:3,473,279...3,479,620
Ensembl chrNW_004955458:3,473,279...3,479,620
JBrowse link
G Pla2g4a phospholipase A2 group IVA ISO RGD PMID:11444430 RGD:1642472 NCBI chrNW_004955406:25,257,361...25,392,079
Ensembl chrNW_004955406:25,257,355...25,394,206
JBrowse link
negative regulation of circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cipc CLOCK interacting pacemaker ISO (MGI:MGI:5532917|PMID:17310242) UniProtKB PMID:17310242 MGI:MGI:5532917 NCBI chrNW_004955438:1,016,721...1,036,379
Ensembl chrNW_004955438:1,016,086...1,036,372
JBrowse link
G Cry1 cryptochrome circadian regulator 1 ISO (MGI:MGI:4410413|PMID:19605937)
(MGI:MGI:5532917|PMID:17310242)
UniProtKB PMID:17310242, PMID:19605937 MGI:MGI:4410413, MGI:MGI:5532917 NCBI chrNW_004955405:40,878,227...40,941,664
Ensembl chrNW_004955405:40,874,322...40,941,664
JBrowse link
G Cry2 cryptochrome circadian regulator 2 ISO (MGI:MGI:4410413|PMID:19605937) UniProtKB PMID:19605937 MGI:MGI:4410413 NCBI chrNW_004955422:2,084,020...2,114,980
Ensembl chrNW_004955422:2,083,138...2,115,072
JBrowse link
G Pasd1 PAS domain containing repressor 1 ISO (PMID:25936801) UniProtKB PMID:25936801 NCBI chrNW_004955498:7,127,978...7,194,359 JBrowse link
G Per2 period circadian regulator 2 ISO (MGI:MGI:4410413|PMID:19605937) UniProtKB PMID:19605937 MGI:MGI:4410413 NCBI chrNW_004955542:2,331,547...2,369,011
Ensembl chrNW_004955542:2,338,099...2,371,274
JBrowse link
G Piwil2 piwi like RNA-mediated gene silencing 2 ISO (MGI:MGI:6285118|PMID:28903391)
(PMID:28903391)
UniProt PMID:28903391 MGI:MGI:6285118 NCBI chrNW_004955403:45,737,674...45,819,478
Ensembl chrNW_004955403:45,737,674...45,819,873
JBrowse link
G Sfpq splicing factor proline and glutamine rich ISO (MGI:MGI:5014424|PMID:21680841) UniProtKB PMID:21680841 MGI:MGI:5014424 NCBI chrNW_004955452:13,267,968...13,283,823 JBrowse link
G Sin3a SIN3 transcription regulator family member A ISO (MGI:MGI:5014424|PMID:21680841) UniProtKB PMID:21680841 MGI:MGI:5014424 NCBI chrNW_004955450:2,804,551...2,870,450
Ensembl chrNW_004955450:2,808,130...2,870,450
JBrowse link
G Suv39h1 suppressor of variegation 3-9 homolog 1 ISO (MGI:MGI:5569417|PMID:24413057) UniProtKB PMID:24413057 MGI:MGI:5569417 NCBI chrNW_004955543:258,479...271,128
Ensembl chrNW_004955543:258,479...272,473
JBrowse link
G Suv39h2 suppressor of variegation 3-9 homolog 2 ISO (MGI:MGI:5569417|PMID:24413057) UniProtKB PMID:24413057 MGI:MGI:5569417 NCBI chrNW_004955429:19,503,197...19,526,454
Ensembl chrNW_004955429:19,503,197...19,528,027
JBrowse link
negative regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase ISO RGD PMID:19066225 RGD:5128864 NCBI chrNW_004955445:12,696,096...12,717,488
Ensembl chrNW_004955445:12,696,096...12,717,488
JBrowse link
G Adora1 adenosine A1 receptor ISO RGD PMID:19491711 RGD:2317916 NCBI chrNW_004955406:39,148,811...39,183,577
Ensembl chrNW_004955406:39,149,689...39,187,688
JBrowse link
negative regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ghrl ghrelin and obestatin prepropeptide ISO (PMID:18329818) BHF-UCL PMID:18329818 NCBI chrNW_004955561:1,676,475...1,682,205
Ensembl chrNW_004955561:1,676,576...1,681,812
JBrowse link
G Htr7 5-hydroxytryptamine receptor 7 ISO RGD PMID:18466985 RGD:6480669 NCBI chrNW_004955425:2,321,420...2,420,420
Ensembl chrNW_004955425:2,321,420...2,420,530
JBrowse link
G Ptger4 prostaglandin E receptor 4 ISO RGD PMID:10923657 RGD:10043386 NCBI chrNW_004955426:24,997,811...25,010,822
Ensembl chrNW_004955426:24,997,811...25,010,822
JBrowse link
negative regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora1 adenosine A1 receptor ISO in the sleep-promoting area of the lateral preoptic area of the brain RGD PMID:16109808 RGD:1625234 NCBI chrNW_004955406:39,148,811...39,183,577
Ensembl chrNW_004955406:39,149,689...39,187,688
JBrowse link
G Drd1 dopamine receptor D1 ISO RGD PMID:12944496 RGD:1581422 NCBI chrNW_004955408:28,003,229...28,006,595
Ensembl chrNW_004955408:28,003,229...28,006,595
JBrowse link
G Drd2 dopamine receptor D2 ISO RGD PMID:12944496 RGD:1581422 NCBI chrNW_004955412:15,054,255...15,114,558
Ensembl chrNW_004955412:15,054,038...15,114,573
JBrowse link
negative regulation of circadian sleep/wake cycle, wakefulness term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptger3 prostaglandin E receptor 3 ISO RGD PMID:10923657 RGD:10043386 NCBI chrNW_004955423:21,096,926...21,164,435 JBrowse link
negative regulation of locomotor rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lepr leptin receptor ISO RGD PMID:16982424 RGD:10412019 NCBI chrNW_004955423:25,108,897...25,185,315
Ensembl chrNW_004955423:25,111,266...25,185,407
JBrowse link
negative regulation of progesterone secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tp53 tumor protein p53 ISO (PMID:18703674) AgBase PMID:18703674 NCBI chrNW_004955467:9,241,391...9,256,716
Ensembl chrNW_004955467:9,252,130...9,255,928
JBrowse link
ovarian cumulus expansion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmpr1b bone morphogenetic protein receptor type 1B ISO (MGI:MGI:2136692|PMID:11416163) UniProtKB PMID:11416163 MGI:MGI:2136692 NCBI chrNW_004955405:5,408,171...5,784,930
Ensembl chrNW_004955405:5,700,162...5,787,957
JBrowse link
G Ereg epiregulin ISO PMID:15459120 UniProt PMID:15459120 RGD:2316284 NCBI chrNW_004955474:612,440...627,606
Ensembl chrNW_004955474:612,440...627,606
JBrowse link
G Gdf9 growth differentiation factor 9 ISO (PMID:24313324) AgBase PMID:24313324 NCBI chrNW_004955408:4,234,208...4,239,795 JBrowse link
G Kif20a kinesin family member 20A ISO (PMID:25036038) AgBase PMID:25036038 NCBI chrNW_004955418:2,222,398...2,232,775
Ensembl chrNW_004955418:2,222,398...2,232,775
JBrowse link
G Ptx3 pentraxin 3 ISO (MGI:MGI:3761906|PMID:17675295) MGI PMID:17675295 MGI:MGI:3761906 NCBI chrNW_004955448:8,366,795...8,373,010
Ensembl chrNW_004955448:8,366,925...8,372,411
JBrowse link
ovarian follicle rupture term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen ISO (MGI:MGI:1934990|PMID:11384650) MGI PMID:11384650 MGI:MGI:1934990 NCBI chrNW_004955492:7,863,662...7,874,863
Ensembl chrNW_004955492:7,866,833...7,873,357
JBrowse link
G Edn2 endothelin 2 ISO RGD PMID:16410304 RGD:1581792 NCBI chrNW_004955537:1,228,062...1,233,784
Ensembl chrNW_004955537:1,228,070...1,233,797
JBrowse link
G Nrip1 nuclear receptor interacting protein 1 ISO (MGI:MGI:3689796|PMID:15919748) UniProtKB PMID:15919748 MGI:MGI:3689796 NCBI chrNW_004955407:16,740,253...16,820,297
Ensembl chrNW_004955407:16,740,253...16,820,297
JBrowse link
ovulation cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Axl AXL receptor tyrosine kinase ISO (MGI:MGI:3817816|PMID:18787040) MGI PMID:18787040 MGI:MGI:3817816 NCBI chrNW_004955555:189,445...218,509
Ensembl chrNW_004955555:189,174...218,565
JBrowse link
G Bmp2 bone morphogenetic protein 2 ISO RGD PMID:15283681 RGD:2289021 NCBI chrNW_004955415:17,048,374...17,058,172
Ensembl chrNW_004955415:17,048,030...17,060,181
JBrowse link
G Bmpr1b bone morphogenetic protein receptor type 1B ISO (MGI:MGI:2136692|PMID:11416163) UniProtKB PMID:11416163 MGI:MGI:2136692 NCBI chrNW_004955405:5,408,171...5,784,930
Ensembl chrNW_004955405:5,700,162...5,787,957
JBrowse link
G Chga chromogranin A ISO RGD PMID:12873792 RGD:6907048 NCBI chrNW_004955438:15,092,267...15,104,321
Ensembl chrNW_004955438:15,092,394...15,104,381
JBrowse link
G Chrna7 cholinergic receptor nicotinic alpha 7 subunit ISO (MGI:MGI:3052645|PMID:1400473) MGI PMID:1400473 MGI:MGI:3052645 NCBI chrNW_004955416:30,687,518...30,798,700
Ensembl chrNW_004955416:30,687,478...30,798,700
JBrowse link
G Egfr epidermal growth factor receptor ISO RGD PMID:11796513 RGD:70386 NCBI chrNW_004955456:321,222...456,431 JBrowse link
G Fas Fas cell surface death receptor ISO RGD PMID:16461545 RGD:1600349 NCBI chrNW_004955425:3,961,671...3,987,513
Ensembl chrNW_004955425:3,961,013...3,987,455
JBrowse link
G Gabrb1 gamma-aminobutyric acid type A receptor beta1 subunit ISO RGD PMID:16226387 RGD:6480231 NCBI chrNW_004955443:1,126,223...1,514,291
Ensembl chrNW_004955443:1,132,860...1,514,376
JBrowse link
G Gdf10 growth differentiation factor 10 ISO RGD PMID:12741959 RGD:2316371 NCBI chrNW_004955556:2,185,121...2,195,150
Ensembl chrNW_004955556:2,185,121...2,196,502
JBrowse link
G Gnrh1 gonadotropin releasing hormone 1 ISO RGD PMID:16672174 RGD:1599845 NCBI chrNW_004955403:48,341,731...48,346,595
Ensembl chrNW_004955403:48,343,597...48,346,595
JBrowse link
G Nhlh2 nescient helix-loop-helix 2 ISO (MGI:MGI:3605929|PMID:15465527) MGI PMID:15465527 MGI:MGI:3605929 NCBI chrNW_004955435:19,070,715...19,073,678
Ensembl chrNW_004955435:19,068,761...19,075,257
JBrowse link
G Prl prolactin ISO RGD PMID:17499646 RGD:1642571 NCBI chrNW_004955483:4,495,257...4,503,377 JBrowse link
G Serpinf1 serpin family F member 1 ISO RGD PMID:23466670 RGD:8590225 NCBI chrNW_004955481:1,414,930...1,426,436
Ensembl chrNW_004955481:1,414,930...1,426,241
JBrowse link
G Timp4 TIMP metallopeptidase inhibitor 4 ISO RGD PMID:12493716 RGD:1302332 NCBI chrNW_004955429:14,689,016...14,693,211
Ensembl chrNW_004955429:14,685,031...14,693,211
JBrowse link
G Tyro3 TYRO3 protein tyrosine kinase ISO (MGI:MGI:3817816|PMID:18787040) MGI PMID:18787040 MGI:MGI:3817816 NCBI chrNW_004955416:8,361,722...8,377,629
Ensembl chrNW_004955416:8,359,207...8,377,692
JBrowse link
ovulation cycle process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmpk1 cytidine/uridine monophosphate kinase 1 ISO RGD PMID:16400681 RGD:5133250 NCBI chrNW_004955464:11,179,432...11,213,147 JBrowse link
G Fshr follicle stimulating hormone receptor ISO (MGI:MGI:1926755|PMID:11089565) MGI PMID:11089565 MGI:MGI:1926755 NCBI chrNW_004955441:15,422,190...15,585,446
Ensembl chrNW_004955441:15,422,190...15,585,537
JBrowse link
G Glrx glutaredoxin ISO RGD PMID:15956334 RGD:9686044 NCBI chrNW_004955418:16,747,709...16,754,718
Ensembl chrNW_004955418:16,747,776...16,752,858
JBrowse link
G Lhcgr luteinizing hormone/choriogonadotropin receptor ISO (MGI:MGI:1929316|PMID:11145748) MGI PMID:11145748 MGI:MGI:1929316 NCBI chrNW_004955441:15,205,883...15,263,617 JBrowse link
G Map2k6 mitogen-activated protein kinase kinase 6 ISO RGD PMID:11328854 RGD:7495835 NCBI chrNW_004955478:3,331,607...3,448,840
Ensembl chrNW_004955478:3,331,607...3,448,842
JBrowse link
G Mstn myostatin ISO RGD PMID:18845635 RGD:2303546 NCBI chrNW_004955403:8,914,505...8,921,190
Ensembl chrNW_004955403:8,914,482...8,923,465
JBrowse link
G Pam peptidylglycine alpha-amidating monooxygenase ISO RGD PMID:9618561 RGD:2302425 NCBI chrNW_004955418:10,953,044...11,107,668
Ensembl chrNW_004955418:10,953,696...11,107,667
JBrowse link
ovulation from ovarian follicle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts1 ADAM metallopeptidase with thrombospondin type 1 motif 1 ISO (MGI:MGI:3531576|PMID:14668204) MGI PMID:14668204 MGI:MGI:3531576 NCBI chrNW_004955407:26,524,487...26,533,038
Ensembl chrNW_004955407:26,524,130...26,533,038
JBrowse link
G Cbr1 carbonyl reductase 1 ISO RGD PMID:10642578 RGD:1299856 NCBI chrNW_004955407:35,351,601...35,354,510 JBrowse link
G Foxo3 forkhead box O3 ISO (MGI:MGI:2667256|PMID:12855809) MGI PMID:12855809 MGI:MGI:2667256 NCBI chrNW_004955411:33,655,958...33,770,829
Ensembl chrNW_004955411:33,655,958...33,770,829
JBrowse link
G Lep leptin ISO RGD PMID:17071778 RGD:1582677 NCBI chrNW_004955479:9,266,604...9,276,568
Ensembl chrNW_004955479:9,274,516...9,279,472
JBrowse link
G Lepr leptin receptor ISO RGD PMID:12959975 RGD:1582680 NCBI chrNW_004955423:25,108,897...25,185,315
Ensembl chrNW_004955423:25,111,266...25,185,407
JBrowse link
G Mmp19 matrix metallopeptidase 19 ISO RGD PMID:15286033 RGD:1642024 NCBI chrNW_004955458:3,473,279...3,479,620
Ensembl chrNW_004955458:3,473,279...3,479,620
JBrowse link
G Mmp2 matrix metallopeptidase 2 ISO RGD PMID:14668206 RGD:1582606 NCBI chrNW_004955433:13,024,844...13,050,041
Ensembl chrNW_004955433:13,024,418...13,052,775
JBrowse link
G Nos2 nitric oxide synthase 2 NOT ISO (MGI:MGI:2157249|PMID:11779605) MGI PMID:11779605 MGI:MGI:2157249 NCBI chrNW_004955481:5,197,957...5,232,406
Ensembl chrNW_004955481:5,201,234...5,231,961
JBrowse link
G Nos3 nitric oxide synthase 3 ISO (MGI:MGI:2157249|PMID:11779605) MGI PMID:11779605 MGI:MGI:2157249 NCBI chrNW_004955491:5,438,228...5,457,308
Ensembl chrNW_004955491:5,438,010...5,460,814
JBrowse link
G Pgr progesterone receptor ISO (MGI:MGI:2673067|PMID:12897242) MGI PMID:12897242 MGI:MGI:2673067 NCBI chrNW_004955412:4,643,839...4,693,478 JBrowse link
G Pla2g4a phospholipase A2 group IVA ISO RGD PMID:10189070 RGD:1642477 NCBI chrNW_004955406:25,257,361...25,392,079
Ensembl chrNW_004955406:25,257,355...25,394,206
JBrowse link
G Sirt1 sirtuin 1 ISO (MGI:MGI:2447945|PMID:12482959) MGI PMID:12482959 MGI:MGI:2447945 NCBI chrNW_004955425:20,280,725...20,307,663
Ensembl chrNW_004955425:20,279,963...20,307,663
JBrowse link
positive regulation of antral ovarian follicle growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptger4 prostaglandin E receptor 4 ISO RGD PMID:15944932 RGD:10003098 NCBI chrNW_004955426:24,997,811...25,010,822
Ensembl chrNW_004955426:24,997,811...25,010,822
JBrowse link
G Zp3 zona pellucida glycoprotein 3 ISO (MGI:MGI:4943385|PMID:18420282), (MGI:MGI:4943828|PMID:20382503) UniProtKB PMID:18420282, PMID:20382503 MGI:MGI:4943385, MGI:MGI:4943828 NCBI chrNW_004955456:15,013,472...15,020,809 JBrowse link
positive regulation of circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arntl aryl hydrocarbon receptor nuclear translocator like ISO (MGI:MGI:4410413|PMID:19605937) UniProtKB PMID:19605937 MGI:MGI:4410413 NCBI chrNW_004955414:28,652,663...28,748,360
Ensembl chrNW_004955414:28,684,226...28,748,360
JBrowse link
G Btrc beta-transducin repeat containing E3 ubiquitin protein ligase ISO (MGI:MGI:4844267|PMID:18782782) UniProtKB PMID:18782782 MGI:MGI:4844267 NCBI chrNW_004955485:8,724,375...8,846,647
Ensembl chrNW_004955485:8,724,380...8,837,741
JBrowse link
G Fbxw11 F-box and WD repeat domain containing 11 ISO (MGI:MGI:4844267|PMID:18782782) UniProtKB PMID:18782782 MGI:MGI:4844267 NCBI chrNW_004955408:24,703,477...24,834,522
Ensembl chrNW_004955408:24,687,493...24,834,345
JBrowse link
G Mtnr1b melatonin receptor 1B ISO RGD PMID:12643943 RGD:9588678 NCBI chrNW_004955414:1,394,709...1,406,990
Ensembl chrNW_004955414:1,394,923...1,407,217
JBrowse link
G Nkx2-1 NK2 homeobox 1 ISO (MGI:MGI:5574291|PMID:22356123) UniProtKB PMID:22356123 MGI:MGI:5574291 NCBI chrNW_004955409:24,612,490...24,616,360
Ensembl chrNW_004955409:24,612,635...24,616,430
JBrowse link
G Nr1d1 nuclear receptor subfamily 1 group D member 1 ISO RGD PMID:18946026 RGD:10448985 NCBI chrNW_004955451:14,743,763...14,750,903
Ensembl chrNW_004955451:14,742,735...14,750,999
JBrowse link
G Prkg1 protein kinase cGMP-dependent 1 ISO RGD PMID:12930792 RGD:7777105 NCBI chrNW_004955425:6,176,335...7,335,867
Ensembl chrNW_004955425:6,176,432...7,331,446
JBrowse link
G Rora RAR related orphan receptor A ISO (MGI:MGI:5504349|PMID:22753030) UniProtKB PMID:22753030 MGI:MGI:5504349 NCBI chrNW_004955450:14,262,199...14,434,611
Ensembl chrNW_004955450:14,262,190...14,425,233
JBrowse link
G Rorc RAR related orphan receptor C ISO (MGI:MGI:5504349|PMID:22753030) UniProtKB PMID:22753030 MGI:MGI:5504349 NCBI chrNW_004955589:590,653...616,784
Ensembl chrNW_004955589:590,743...616,694
JBrowse link
G Thrap3 thyroid hormone receptor associated protein 3 ISO (PMID:24043798) UniProtKB PMID:24043798 NCBI chrNW_004955452:14,233,155...14,282,521
Ensembl chrNW_004955452:14,233,155...14,283,886
JBrowse link
G Timeless timeless circadian regulator ISO RGD PMID:14564007 RGD:734503 NCBI chrNW_004955458:3,999,143...4,029,523
Ensembl chrNW_004955458:3,997,725...4,029,766
JBrowse link
positive regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alb albumin ISO RGD PMID:9748091 RGD:1625449 NCBI chrNW_004955447:9,327...21,212 JBrowse link
G Ghrh growth hormone releasing hormone ISO RGD PMID:19889861, PMID:20237285 RGD:10401262, RGD:2325188 NCBI chrNW_004955422:24,481,246...24,490,529 JBrowse link
G Ghrhr growth hormone releasing hormone receptor ISO RGD PMID:20237285 RGD:10401262 NCBI chrNW_004955410:32,084,210...32,114,844
Ensembl chrNW_004955410:32,102,367...32,115,080
JBrowse link
G Ghrl ghrelin and obestatin prepropeptide ISO (PMID:18329818) BHF-UCL PMID:18329818 NCBI chrNW_004955561:1,676,475...1,682,205
Ensembl chrNW_004955561:1,676,576...1,681,812
JBrowse link
G Mtnr1b melatonin receptor 1B ISO RGD PMID:19429170, PMID:22171046 RGD:9588660, RGD:9588665 NCBI chrNW_004955414:1,394,709...1,406,990
Ensembl chrNW_004955414:1,394,923...1,407,217
JBrowse link
G Npy2r neuropeptide Y receptor Y2 ISO RGD PMID:16378653 RGD:1642507 NCBI chrNW_004955471:11,796,278...11,804,114
Ensembl chrNW_004955471:11,796,278...11,804,114
JBrowse link
G Ptger3 prostaglandin E receptor 3 ISO RGD PMID:10923657 RGD:10043386 NCBI chrNW_004955423:21,096,926...21,164,435 JBrowse link
G Ptger4 prostaglandin E receptor 4 ISO RGD PMID:10923657 RGD:10043386 NCBI chrNW_004955426:24,997,811...25,010,822
Ensembl chrNW_004955426:24,997,811...25,010,822
JBrowse link
positive regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ghrh growth hormone releasing hormone NOT ISO (PMID:15538933) BHF-UCL PMID:15538933 NCBI chrNW_004955422:24,481,246...24,490,529 JBrowse link
G Pmch pro-melanin concentrating hormone ISO RGD PMID:12964948 RGD:1642489 NCBI chrNW_004955405:37,357,468...37,360,695
Ensembl chrNW_004955405:37,356,755...37,360,695
JBrowse link
G Uts2 urotensin 2 ISO RGD PMID:15944374 RGD:2306844 NCBI chrNW_004955486:5,052,045...5,056,610 JBrowse link
G Uts2r urotensin 2 receptor ISO RGD PMID:15944374 RGD:2306844 NCBI chrNW_004955506:756,859...761,891 JBrowse link
positive regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora2a adenosine A2a receptor ISO in the sleep-promoting area of the lateral preoptic area of the brain RGD PMID:16109808 RGD:1625234 NCBI chrNW_004955455:7,886,720...7,906,214
Ensembl chrNW_004955455:7,895,974...7,906,505
JBrowse link
G Opn4 opsin 4 ISO (MGI:MGI:5925970|PMID:26320947) MGI PMID:26320947 MGI:MGI:5925970 NCBI chrNW_004955510:5,723,804...5,736,070
Ensembl chrNW_004955510:5,724,120...5,736,135
JBrowse link
positive regulation of circadian sleep/wake cycle, wakefulness term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nlgn1 neuroligin 1 ISO (MGI:MGI:5492265|PMID:23716671) UniProtKB PMID:23716671 MGI:MGI:5492265 NCBI chrNW_004955420:3,360,745...4,171,587
Ensembl chrNW_004955420:3,549,021...4,167,493
JBrowse link
G Uts2 urotensin 2 ISO RGD PMID:15944374 RGD:2306844 NCBI chrNW_004955486:5,052,045...5,056,610 JBrowse link
G Uts2r urotensin 2 receptor ISO RGD PMID:15944374 RGD:2306844 NCBI chrNW_004955506:756,859...761,891 JBrowse link
positive regulation of progesterone secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mfn2 mitofusin 2 ISO RGD PMID:25120590 RGD:13204819 NCBI chrNW_004955486:1,937,873...1,962,577
Ensembl chrNW_004955486:1,937,802...1,962,772
JBrowse link
G Retn resistin ISO RGD PMID:21239528 RGD:7207233 NCBI chrNW_004955563:1,607,814...1,609,273
Ensembl chrNW_004955563:1,607,814...1,609,273
JBrowse link
preantral ovarian follicle growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amh anti-Mullerian hormone ISO RGD PMID:11133686 RGD:2315649 NCBI chrNW_004955495:5,893,375...5,896,152
Ensembl chrNW_004955495:5,893,446...5,895,912
JBrowse link
G Gpr149 G protein-coupled receptor 149 ISO (MGI:MGI:4438524|PMID:19887567) MGI PMID:19887567 MGI:MGI:4438524 NCBI chrNW_004955448:5,682,132...5,749,533
Ensembl chrNW_004955448:5,685,168...5,749,467
JBrowse link
G Znf830 zinc finger protein 830 ISO (MGI:MGI:5707559|PMID:25168238) UniProtKB PMID:25168238 MGI:MGI:5707559 NCBI chrNW_004955481:9,661,791...9,663,326
Ensembl chrNW_004955481:9,661,830...9,662,918
JBrowse link
primary ovarian follicle growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fshr follicle stimulating hormone receptor ISO (MGI:MGI:2675862|PMID:12801993) MGI PMID:12801993 MGI:MGI:2675862 NCBI chrNW_004955441:15,422,190...15,585,446
Ensembl chrNW_004955441:15,422,190...15,585,537
JBrowse link
G Sohlh2 spermatogenesis and oogenesis specific basic helix-loop-helix 2 ISO (MGI:MGI:3836097|PMID:18753606) MGI PMID:18753606 MGI:MGI:3836097 NCBI chrNW_004955431:9,874,783...9,952,044 JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase ISO RGD PMID:22905678 RGD:13210788 NCBI chrNW_004955445:19,213,210...19,227,670
Ensembl chrNW_004955445:19,215,161...19,228,695
JBrowse link
progesterone secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fzd4 frizzled class receptor 4 ISO (MGI:MGI:3692134|PMID:16093361) MGI PMID:16093361 MGI:MGI:3692134 NCBI chrNW_004955414:6,094,585...6,103,910
Ensembl chrNW_004955414:6,094,585...6,098,865
JBrowse link
G Inhba inhibin subunit beta A ISO (PMID:10932194) UniProtKB PMID:10932194 NCBI chrNW_004955460:2,054,879...2,066,628
Ensembl chrNW_004955460:2,046,588...2,066,609
JBrowse link
regulation of circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy1 adenylate cyclase 1 ISO (MGI:MGI:5518489|PMID:24048828) UniProtKB PMID:24048828 MGI:MGI:5518489 NCBI chrNW_004955456:6,833,992...6,930,990
Ensembl chrNW_004955456:6,841,637...6,930,990
JBrowse link
G Atg7 autophagy related 7 ISO (MGI:MGI:6208175|PMID:29937374) UniProt PMID:29937374 MGI:MGI:6208175 NCBI chrNW_004955429:14,076,976...14,301,034
Ensembl chrNW_004955429:14,076,960...14,304,236
JBrowse link
G Bhlhe40 basic helix-loop-helix family member e40 ISO (MGI:MGI:6282958|PMID:30012868) UniProt PMID:30012868 MGI:MGI:6282958 NCBI chrNW_004955421:8,463,337...8,468,877
Ensembl chrNW_004955421:8,463,018...8,468,877
JBrowse link
G Btrc beta-transducin repeat containing E3 ubiquitin protein ligase ISO (PMID:15917222) UniProtKB PMID:15917222 NCBI chrNW_004955485:8,724,375...8,846,647
Ensembl chrNW_004955485:8,724,380...8,837,741
JBrowse link
G Ccar2 cell cycle and apoptosis regulator 2 ISO (MGI:MGI:5495335|PMID:23398316) UniProtKB PMID:23398316 MGI:MGI:5495335 NCBI chrNW_004955403:46,027,997...46,042,154
Ensembl chrNW_004955403:46,027,998...46,042,154
JBrowse link
G Cdk1 cyclin dependent kinase 1 ISO (PMID:27238018) UniProt PMID:27238018 NCBI chrNW_004955425:14,210,681...14,226,474
Ensembl chrNW_004955425:14,210,680...14,226,474
JBrowse link
G Clock clock circadian regulator ISO (MGI:MGI:6282958|PMID:30012868) UniProt PMID:30012868 MGI:MGI:6282958 NCBI chrNW_004955447:15,394,496...15,537,969
Ensembl chrNW_004955447:15,454,630...15,530,906
JBrowse link
G Creb1 cAMP responsive element binding protein 1 ISO RGD PMID:12409294 RGD:633667 NCBI chrNW_004955457:7,424,403...7,490,630
Ensembl chrNW_004955457:7,431,736...7,491,149
JBrowse link
G Crem cAMP responsive element modulator ISO RGD PMID:15936880 RGD:1582464 NCBI chrNW_004955462:2,491,504...2,547,587
Ensembl chrNW_004955462:2,491,504...2,536,385
JBrowse link
G Cry1 cryptochrome circadian regulator 1 ISO (MGI:MGI:1334825|PMID:10217146), (MGI:MGI:4366197|PMID:19833968), (MGI:MGI:4947326|PMID:21236481), (MGI:MGI:5490394|PMID:23616524), (MGI:MGI:5908518|PMID:26431207)
(MGI:MGI:5567898|PMID:23575670)
UniProt
UniProtKB
PMID:10217146, PMID:19833968, PMID:21236481, PMID:23575670, PMID:23616524, PMID:26431207 MGI:MGI:1334825, MGI:MGI:4366197, MGI:MGI:4947326, MGI:MGI:5490394, MGI:MGI:5567898, MGI:MGI:5908518 NCBI chrNW_004955405:40,878,227...40,941,664
Ensembl chrNW_004955405:40,874,322...40,941,664
JBrowse link
G Cry2 cryptochrome circadian regulator 2 ISO (MGI:MGI:1334825|PMID:10217146), (MGI:MGI:5490394|PMID:23616524)
(MGI:MGI:5567898|PMID:23575670)
UniProtKB PMID:10217146, PMID:23575670, PMID:23616524 MGI:MGI:1334825, MGI:MGI:5490394, MGI:MGI:5567898 NCBI chrNW_004955422:2,084,020...2,114,980
Ensembl chrNW_004955422:2,083,138...2,115,072
JBrowse link
G Csnk1d casein kinase 1 delta ISO (MGI:MGI:3849793|PMID:19414593), (MGI:MGI:5294280|PMID:21930935) UniProtKB PMID:19414593, PMID:21930935 MGI:MGI:3849793, MGI:MGI:5294280 NCBI chrNW_004955506:904,659...936,293
Ensembl chrNW_004955506:904,660...935,330
JBrowse link
G Csnk1e casein kinase 1 epsilon ISO (MGI:MGI:5294280|PMID:21930935) UniProtKB PMID:21930935 MGI:MGI:5294280 NCBI chrNW_004955413:24,560,889...24,591,669 JBrowse link
G Ddb1 damage specific DNA binding protein 1 ISO (MGI:MGI:5908518|PMID:26431207) UniProt PMID:26431207 MGI:MGI:5908518 NCBI chrNW_004955511:6,209,777...6,233,594
Ensembl chrNW_004955511:6,209,777...6,233,594
JBrowse link
G Drd4 dopamine receptor D4 ISO (MGI:MGI:5518489|PMID:24048828) UniProtKB PMID:24048828 MGI:MGI:5518489 NCBI chrNW_004955476:11,424,347...11,426,962
Ensembl chrNW_004955476:11,424,411...11,426,960
JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit ISO (PMID:16717091)
(MGI:MGI:3694308|PMID:16717091)
UniProtKB PMID:16717091 MGI:MGI:3694308 NCBI chrNW_004955491:4,215,353...4,292,229
Ensembl chrNW_004955491:4,215,298...4,292,235
JBrowse link
G Fbxl3 F-box and leucine rich repeat protein 3 ISO (MGI:MGI:3710694|PMID:17463252), (MGI:MGI:3715674|PMID:17462724), (MGI:MGI:5490394|PMID:23616524)
(PMID:17463251)
UniProtKB PMID:17462724, PMID:17463251, PMID:17463252, PMID:23616524 MGI:MGI:3710694, MGI:MGI:3715674, MGI:MGI:5490394 NCBI chrNW_004955404:30,215,140...30,229,798
Ensembl chrNW_004955404:30,215,108...30,229,798
JBrowse link
G Fbxw7 F-box and WD repeat domain containing 7 ISO (MGI:MGI:6282935|PMID:27238018)
(PMID:27238018)
UniProt PMID:27238018 MGI:MGI:6282935 NCBI chrNW_004955471:6,852,459...7,026,590
Ensembl chrNW_004955471:6,848,101...6,955,881
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta ISO (MGI:MGI:6294161|PMID:28556462) UniProt PMID:28556462 MGI:MGI:6294161 NCBI chrNW_004955427:19,489,972...19,671,137
Ensembl chrNW_004955427:19,495,422...19,671,137
JBrowse link
G Hdac3 histone deacetylase 3 ISO (MGI:MGI:5882311|PMID:26776516) UniProt PMID:26776516 MGI:MGI:5882311 NCBI chrNW_004955415:12,138,520...12,154,234
Ensembl chrNW_004955415:12,138,870...12,154,234
JBrowse link
G Hnf4a hepatocyte nuclear factor 4 alpha ISO (MGI:MGI:6272229|PMID:30530698)
(PMID:30530698)
UniProt PMID:30530698 MGI:MGI:6272229 NCBI chrNW_004955445:12,925,248...12,962,501
Ensembl chrNW_004955445:12,924,662...12,984,281
JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D ISO (PMID:24423872) UniProtKB PMID:24423872 NCBI chrNW_004955433:6,452,931...6,470,209
Ensembl chrNW_004955433:6,454,454...6,469,904
JBrowse link
G Id2 inhibitor of DNA binding 2 ISO (MGI:MGI:3838062|PMID:19217292) UniProtKB PMID:19217292 MGI:MGI:3838062 NCBI chrNW_004955487:878,326...880,783
Ensembl chrNW_004955487:878,326...880,783
JBrowse link
G Kdm2a lysine demethylase 2A ISO (PMID:26037310) UniProt PMID:26037310 NCBI chrNW_004955422:18,201,243...18,308,163
Ensembl chrNW_004955422:18,200,758...18,308,163
JBrowse link
G Klf10 Kruppel like factor 10 ISO PMID:20070857 UniProt PMID:20070857 RGD:10047352 NCBI chrNW_004955417:27,165,146...27,168,604
Ensembl chrNW_004955417:27,164,839...27,168,604
JBrowse link
G Maged1 MAGE family member D1 ISO (MGI:MGI:5508569|PMID:20300063) UniProtKB PMID:20300063 MGI:MGI:5508569 NCBI chrNW_004955543:2,939,960...3,052,442
Ensembl chrNW_004955543:2,975,259...3,052,504
JBrowse link
G Magel2 MAGE family member L2 ISO (MGI:MGI:5607219|PMID:22208286) UniProtKB PMID:22208286 MGI:MGI:5607219 NCBI chrNW_004955416:31,091,306...31,095,420
Ensembl chrNW_004955416:31,091,151...31,095,484
JBrowse link
G Mapk10 mitogen-activated protein kinase 10 ISO (MGI:MGI:5431019|PMID:22441692) UniProt PMID:22441692 MGI:MGI:5431019 NCBI chrNW_004955474:3,451,656...3,772,405
Ensembl chrNW_004955474:3,624,679...3,772,458
JBrowse link
G Mapk8 mitogen-activated protein kinase 8 ISO (MGI:MGI:5431019|PMID:22441692) UniProtKB PMID:22441692 MGI:MGI:5431019 NCBI chrNW_004955556:1,593,552...1,705,543
Ensembl chrNW_004955556:1,593,494...1,665,784
JBrowse link
G Mapk9 mitogen-activated protein kinase 9 ISO (MGI:MGI:5431019|PMID:22441692) UniProtKB PMID:22441692 MGI:MGI:5431019 NCBI chrNW_004955408:391,094...430,638
Ensembl chrNW_004955408:391,094...430,981
JBrowse link
G Mtor mechanistic target of rapamycin kinase ISO (MGI:MGI:6159528|PMID:29750810) UniProt PMID:29750810 MGI:MGI:6159528 NCBI chrNW_004955486:2,487,642...2,599,694
Ensembl chrNW_004955486:2,487,642...2,599,694
JBrowse link
G Noct nocturnin ISO (MGI:MGI:5308514|PMID:22073225) UniProtKB PMID:22073225 MGI:MGI:5308514 NCBI chrNW_004955428:4,559,027...4,580,013 JBrowse link
G Nono non-POU domain containing octamer binding ISO (MGI:MGI:5444785|PMID:22966205) UniProtKB PMID:22966205 MGI:MGI:5444785 NCBI chrNW_004955475:10,833,514...10,853,460
Ensembl chrNW_004955475:10,833,189...10,853,519
JBrowse link
G Npas2 neuronal PAS domain protein 2 ISO (MGI:MGI:5518489|PMID:24048828) UniProtKB PMID:24048828 MGI:MGI:5518489 NCBI chrNW_004955470:6,826,541...6,906,814
Ensembl chrNW_004955470:6,831,992...6,905,679
JBrowse link
G Nr1d1 nuclear receptor subfamily 1 group D member 1 ISO PMID:22425774
(MGI:MGI:4360821|PMID:19721697), (MGI:MGI:4429726|PMID:20159955), (MGI:MGI:6162161|PMID:29533925)
UniProt PMID:19721697, PMID:20159955, PMID:22425774, PMID:29533925 MGI:MGI:4360821, MGI:MGI:4429726, MGI:MGI:6162161, RGD:8553819 NCBI chrNW_004955451:14,743,763...14,750,903
Ensembl chrNW_004955451:14,742,735...14,750,999
JBrowse link
G Nr1d2 nuclear receptor subfamily 1 group D member 2 ISO (MGI:MGI:5526909|PMID:23221024)
(MGI:MGI:6162161|PMID:29533925)
UniProtKB
UniProt
PMID:23221024, PMID:29533925 MGI:MGI:5526909, MGI:MGI:6162161 NCBI chrNW_004955430:15,812,449...15,834,341
Ensembl chrNW_004955430:15,812,448...15,834,412
JBrowse link
G Opn4 opsin 4 ISO (MGI:MGI:2667269|PMID:12808468) UniProtKB PMID:12808468 MGI:MGI:2667269 NCBI chrNW_004955510:5,723,804...5,736,070
Ensembl chrNW_004955510:5,724,120...5,736,135
JBrowse link
G Per1 period circadian regulator 1 ISO (MGI:MGI:1935010|PMID:11395012) UniProtKB PMID:11395012 MGI:MGI:1935010 NCBI chrNW_004955467:8,798,436...8,813,369
Ensembl chrNW_004955467:8,797,912...8,813,365
JBrowse link
G Per2 period circadian regulator 2 ISO (MGI:MGI:1935010|PMID:11395012), (MGI:MGI:4410390|PMID:19917250) UniProtKB PMID:11395012, PMID:19917250 MGI:MGI:1935010, MGI:MGI:4410390 NCBI chrNW_004955542:2,331,547...2,369,011
Ensembl chrNW_004955542:2,338,099...2,371,274
JBrowse link
G Pml PML nuclear body scaffold ISO (MGI:MGI:5314433|PMID:22274616) UniProtKB PMID:22274616 MGI:MGI:5314433 NCBI chrNW_004955450:3,654,854...3,692,057
Ensembl chrNW_004955450:3,656,498...3,692,406
JBrowse link
G Ppara peroxisome proliferator activated receptor alpha ISO (MGI:MGI:4429726|PMID:20159955) UniProtKB PMID:20159955 MGI:MGI:4429726 NCBI chrNW_004955413:30,306,563...30,366,245
Ensembl chrNW_004955413:30,307,219...30,359,500
JBrowse link
G Pparg peroxisome proliferator activated receptor gamma ISO (MGI:MGI:3830801|PMID:19041764) UniProtKB PMID:19041764 MGI:MGI:3830801 NCBI chrNW_004955429:14,814,690...14,936,869
Ensembl chrNW_004955429:14,873,908...14,937,387
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha ISO (MGI:MGI:3715412|PMID:17476214) UniProtKB PMID:17476214 MGI:MGI:3715412 NCBI chrNW_004955480:543,397...1,188,376
Ensembl chrNW_004955480:1,078,322...1,188,435
JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha ISO (MGI:MGI:5086036|PMID:21712997)
(PMID:21712997)
(MGI:MGI:5294280|PMID:21930935)
UniProtKB PMID:21712997, PMID:21930935 MGI:MGI:5086036, MGI:MGI:5294280 NCBI chrNW_004955422:18,076,670...18,079,859
Ensembl chrNW_004955422:18,076,670...18,079,859
JBrowse link
G Ppp1cb protein phosphatase 1 catalytic subunit beta ISO (PMID:21712997)
(MGI:MGI:5086036|PMID:21712997)
(MGI:MGI:5294280|PMID:21930935)
UniProtKB PMID:21712997, PMID:21930935 MGI:MGI:5086036, MGI:MGI:5294280 NCBI chrNW_004955469:10,657,029...10,682,398
Ensembl chrNW_004955469:10,662,032...10,682,398
JBrowse link
G Ppp1cc protein phosphatase 1 catalytic subunit gamma ISO (PMID:21712997)
(MGI:MGI:5294280|PMID:21930935)
(MGI:MGI:5086036|PMID:21712997)
UniProtKB
UniProt
PMID:21712997, PMID:21930935 MGI:MGI:5086036, MGI:MGI:5294280 NCBI chrNW_004955482:7,582,605...7,605,340
Ensembl chrNW_004955482:7,578,782...7,606,132
JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 ISO (MGI:MGI:4366197|PMID:19833968) UniProtKB PMID:19833968 MGI:MGI:4366197 NCBI chrNW_004955426:25,079,718...25,102,090
Ensembl chrNW_004955426:25,079,718...25,102,090
JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 ISO (MGI:MGI:4366197|PMID:19833968) UniProtKB PMID:19833968 MGI:MGI:4366197 NCBI chrNW_004955464:2,996,608...3,062,197
Ensembl chrNW_004955464:3,003,837...3,062,197
JBrowse link
G Prkcg protein kinase C gamma ISO (MGI:MGI:5467682|PMID:23185022) UniProtKB PMID:23185022 MGI:MGI:5467682 NCBI chrNW_004955604:262,182...279,259
Ensembl chrNW_004955604:262,071...279,259
JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit ISO (MGI:MGI:5554971|PMID:24158435) UniProtKB PMID:24158435 MGI:MGI:5554971 NCBI chrNW_004955454:7,733,697...7,890,896
Ensembl chrNW_004955454:7,733,978...7,890,867
JBrowse link
G Prox1 prospero homeobox 1 ISO (PMID:23723244) UniProtKB PMID:23723244 NCBI chrNW_004955406:3,715,140...3,770,019
Ensembl chrNW_004955406:3,719,972...3,770,555
JBrowse link
G Pspc1 paraspeckle component 1 ISO (MGI:MGI:5444785|PMID:22966205) UniProtKB PMID:22966205 MGI:MGI:5444785 NCBI chrNW_004955497:574,678...641,885
Ensembl chrNW_004955497:575,340...642,809
JBrowse link
G Rock2 Rho associated coiled-coil containing protein kinase 2 ISO (MGI:MGI:5567901|PMID:23172836)
(PMID:23172836)
UniProtKB
UniProt
PMID:23172836 MGI:MGI:5567901 NCBI chrNW_004955487:5,856,190...5,972,408
Ensembl chrNW_004955487:5,859,204...5,972,401
JBrowse link
G Rora RAR related orphan receptor A ISO (MGI:MGI:5567901|PMID:23172836) UniProtKB PMID:23172836 MGI:MGI:5567901 NCBI chrNW_004955450:14,262,199...14,434,611
Ensembl chrNW_004955450:14,262,190...14,425,233
JBrowse link
G Rorb RAR related orphan receptor B ISO (MGI:MGI:3712731|PMID:17303680) UniProtKB PMID:17303680 MGI:MGI:3712731 NCBI chrNW_004955512:4,362,287...4,541,432
Ensembl chrNW_004955512:4,362,287...4,541,445
JBrowse link
G Sfpq splicing factor proline and glutamine rich ISO (MGI:MGI:5444785|PMID:22966205) UniProtKB PMID:22966205 MGI:MGI:5444785 NCBI chrNW_004955452:13,267,968...13,283,823 JBrowse link
G Siah2 siah E3 ubiquitin protein ligase 2 ISO (PMID:26392558)
(MGI:MGI:6241928|PMID:26392558)
UniProt PMID:26392558 MGI:MGI:6241928 NCBI chrNW_004955448:1,907,478...1,926,445
Ensembl chrNW_004955448:1,907,401...1,926,445
JBrowse link
G Spsb4 splA/ryanodine receptor domain and SOCS box containing 4 ISO (PMID:26392558) UniProt PMID:26392558 NCBI chrNW_004955508:4,539,531...4,615,439
Ensembl chrNW_004955508:4,539,516...4,615,439
JBrowse link
G Srrd SRR1 domain containing ISO (MGI:MGI:6282940|PMID:28802827) UniProt PMID:28802827 MGI:MGI:6282940 NCBI chrNW_004955455:1,076,113...1,090,346
Ensembl chrNW_004955455:1,075,652...1,083,102
JBrowse link
G Tardbp TAR DNA binding protein ISO (MGI:MGI:6253084|PMID:27123980) UniProt PMID:27123980 MGI:MGI:6253084 NCBI chrNW_004955486:2,656,121...2,674,808
Ensembl chrNW_004955486:2,656,121...2,674,807
JBrowse link
G Timeless timeless circadian regulator ISO (MGI:MGI:5578016|PMID:23418588)
(PMID:23418588)
UniProtKB PMID:23418588 MGI:MGI:5578016 NCBI chrNW_004955458:3,999,143...4,029,523
Ensembl chrNW_004955458:3,997,725...4,029,766
JBrowse link
G Top2a DNA topoisomerase II alpha ISO (MGI:MGI:5613450|PMID:24321095) UniProtKB PMID:24321095 MGI:MGI:5613450 NCBI chrNW_004955451:14,928,273...14,964,855
Ensembl chrNW_004955451:14,929,136...14,964,723
JBrowse link
G Ube3a ubiquitin protein ligase E3A ISO (MGI:MGI:5607382|PMID:24728990)
(PMID:24728990)
UniProtKB PMID:24728990 MGI:MGI:5607382 NCBI chrNW_004955533:3,733,148...3,828,353
Ensembl chrNW_004955533:3,733,148...3,821,577
JBrowse link
G Usp7 ubiquitin specific peptidase 7 ISO (PMID:27123980)
(MGI:MGI:6253084|PMID:27123980)
UniProt PMID:27123980 MGI:MGI:6253084 NCBI chrNW_004955442:9,316,022...9,355,751
Ensembl chrNW_004955442:9,315,225...9,356,393
JBrowse link
G Usp9x ubiquitin specific peptidase 9 X-linked ISO (PMID:29626158) UniProt PMID:29626158 NCBI chrNW_004955565:1,479,040...1,602,070
Ensembl chrNW_004955565:1,479,040...1,602,070
JBrowse link
regulation of circadian sleep/wake cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr1d1 nuclear receptor subfamily 1 group D member 1 ISO (MGI:MGI:6283959|PMID:30792350) UniProt PMID:30792350 MGI:MGI:6283959 NCBI chrNW_004955451:14,743,763...14,750,903
Ensembl chrNW_004955451:14,742,735...14,750,999
JBrowse link
regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit ISO (MGI:MGI:3575072|PMID:15215293) MGI PMID:15215293 MGI:MGI:3575072 NCBI chrNW_004955545:1,065,457...1,077,056
Ensembl chrNW_004955545:1,065,457...1,077,526
JBrowse link
G Il6 interleukin 6 ISO RGD PMID:12667648 RGD:1358315 NCBI chrNW_004955410:25,079,835...25,084,390 JBrowse link
G Kcna2 potassium voltage-gated channel subfamily A member 2 ISO (MGI:MGI:3770734|PMID:17925011) UniProtKB PMID:17925011 MGI:MGI:3770734 NCBI chrNW_004955435:14,074,346...14,080,026
Ensembl chrNW_004955435:14,074,346...14,078,806
JBrowse link
regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit ISO (MGI:MGI:3575072|PMID:15215293) MGI PMID:15215293 MGI:MGI:3575072 NCBI chrNW_004955545:1,065,457...1,077,056
Ensembl chrNW_004955545:1,065,457...1,077,526
JBrowse link
regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase ISO RGD PMID:11038259 RGD:631747 NCBI chrNW_004955445:12,696,096...12,717,488
Ensembl chrNW_004955445:12,696,096...12,717,488
JBrowse link
G Adrb1 adrenoceptor beta 1 ISO (PMID:25083013)
(MGI:MGI:6368107|PMID:25083013)
UniProt PMID:25083013 MGI:MGI:6368107 NCBI chrNW_004955431:19,025,663...19,027,026 JBrowse link
G Cort cortistatin ISO RGD PMID:8622767 RGD:727760 NCBI chrNW_004955486:3,152,745...3,154,956 JBrowse link
G Csf2 colony stimulating factor 2 ISO RGD PMID:12047622 RGD:10449529 NCBI chrNW_004955408:3,452,009...3,454,255
Ensembl chrNW_004955408:3,451,965...3,454,312
JBrowse link
G Drd3 dopamine receptor D3 ISO RGD PMID:15913875 RGD:1625069 NCBI chrNW_004955427:14,219,519...14,252,178
Ensembl chrNW_004955427:14,219,594...14,252,178
JBrowse link
G Nmu neuromedin U ISO PMID:20233222 UniProt PMID:20233222 RGD:12911001 NCBI chrNW_004955447:15,324,702...15,361,726
Ensembl chrNW_004955447:15,328,973...15,357,830
JBrowse link
G Per3 period circadian regulator 3 ISO (MGI:MGI:5300112|PMID:21957163)
(PMID:17346965), (PMID:19716732), (PMID:24439663), (PMID:24577121), (PMID:26903630)
UniProtKB PMID:17346965, PMID:19716732, PMID:21957163, PMID:24439663, PMID:24577121, PMID:26903630 MGI:MGI:5300112 NCBI chrNW_004955486:5,058,602...5,101,480
Ensembl chrNW_004955486:5,059,773...5,101,637
JBrowse link
G Pglyrp1 peptidoglycan recognition protein 1 ISO RGD PMID:11145837 RGD:724610 NCBI chrNW_004955574:424,046...427,675
Ensembl chrNW_004955574:424,142...427,540
JBrowse link
G Ptgds prostaglandin D2 synthase ISO (MGI:MGI:3687807|PMID:10781097) UniProtKB PMID:10781097 MGI:MGI:3687807 NCBI chrNW_004955513:5,009,530...5,012,781 JBrowse link
regulation of circadian sleep/wake cycle, wakefulness term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hcrtr2 hypocretin receptor 2 ISO (PMID:11282968) UniProtKB PMID:11282968 NCBI chrNW_004955411:970,892...1,010,138 JBrowse link
G Ptger3 prostaglandin E receptor 3 ISO RGD PMID:10923657 RGD:10043386 NCBI chrNW_004955423:21,096,926...21,164,435 JBrowse link
G Ptger4 prostaglandin E receptor 4 ISO RGD PMID:10923657 RGD:10043386 NCBI chrNW_004955426:24,997,811...25,010,822
Ensembl chrNW_004955426:24,997,811...25,010,822
JBrowse link
regulation of locomotor rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mtor mechanistic target of rapamycin kinase ISO (MGI:MGI:6159528|PMID:29750810) UniProt PMID:29750810 MGI:MGI:6159528 NCBI chrNW_004955486:2,487,642...2,599,694
Ensembl chrNW_004955486:2,487,642...2,599,694
JBrowse link
G Oprl1 opioid related nociceptin receptor 1 ISO RGD PMID:16310969 RGD:9835023 NCBI chrNW_004955528:161,673...184,515
Ensembl chrNW_004955528:161,673...167,937
JBrowse link
G Zfhx3 zinc finger homeobox 3 ISO (MGI:MGI:5660827|PMID:26232227) UniProtKB PMID:26232227 MGI:MGI:5660827 NCBI chrNW_004955484:5,470,203...5,746,325
Ensembl chrNW_004955484:5,474,769...5,789,707
JBrowse link
regulation of progesterone secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gdf9 growth differentiation factor 9 ISO (PMID:20660033)
(PMID:12050262)
UniProtKB PMID:12050262, PMID:20660033 NCBI chrNW_004955408:4,234,208...4,239,795 JBrowse link
rhythmic behavior term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chat choline O-acetyltransferase ISO (MGI:MGI:3577822|PMID:15820692) MGI PMID:15820692 MGI:MGI:3577822 NCBI chrNW_004955556:650,290...695,135
Ensembl chrNW_004955556:650,279...693,276
JBrowse link
G Egr2 early growth response 2 ISO (MGI:MGI:2176716|PMID:8893031) MGI PMID:8893031 MGI:MGI:2176716 NCBI chrNW_004955425:16,055,748...16,068,429
Ensembl chrNW_004955425:16,055,748...16,060,048
JBrowse link
ultradian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Enox2 ecto-NOX disulfide-thiol exchanger 2 ISO (PMID:12356293) UniProtKB PMID:12356293 NCBI chrNW_004955473:4,123,403...4,455,268
Ensembl chrNW_004955473:4,358,232...4,455,268
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 11889
    rhythmic process 357
      circadian rhythm + 248
      ovulation cycle + 114
      ovulation cycle process + 72
      rhythmic behavior + 68
      ultradian rhythm + 1
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.