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ONTOLOGY REPORT - ANNOTATIONS


Term:rhythmic process
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Accession:GO:0048511 term browser browse the term
Definition:Any process pertinent to the generation and maintenance of rhythms in the physiology of an organism.
Synonyms:related_synonym: rhythm
 only_in_taxon: NCBITaxon:131567 ! cellular organisms


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rhythmic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AHR aryl hydrocarbon receptor IEA UniProt GO_REF:0000043 NCBI chr14:31,743,704...31,793,484
Ensembl chr14:31,686,170...31,791,444
JBrowse link
G CREBBP CREB binding protein IEA UniProt GO_REF:0000043 NCBI chr 6:37,410,201...37,536,688
Ensembl chr 6:37,409,930...37,534,176
JBrowse link
G DDX5 DEAD-box helicase 5 IEA UniProt GO_REF:0000043 NCBI chr 9:12,300,706...12,307,931
Ensembl chr 9:12,300,708...12,307,663
JBrowse link
G DNM1L dynamin 1 like IEA UniProt GO_REF:0000043 NCBI chr27:16,161,855...16,211,983
Ensembl chr27:16,163,357...16,211,957
JBrowse link
G EP300 E1A binding protein p300 IEA UniProt GO_REF:0000043 NCBI chr10:24,076,538...24,156,708
Ensembl chr10:24,077,971...24,156,396
JBrowse link
G GRIN1 glutamate ionotropic receptor NMDA type subunit 1 ISO RGD PMID:16477151 RGD:1642190 NCBI chr 9:48,492,967...48,513,981
Ensembl chr 9:48,493,287...48,509,050
JBrowse link
G GRIN2A glutamate ionotropic receptor NMDA type subunit 2A ISO RGD PMID:16477151 RGD:1642190 NCBI chr 6:32,132,070...32,678,319
Ensembl chr 6:32,303,121...32,668,960
JBrowse link
G GRIN2B glutamate ionotropic receptor NMDA type subunit 2B ISO RGD PMID:16477151 RGD:1642190 NCBI chr27:32,470,889...32,883,606
Ensembl chr27:32,471,153...32,877,680
JBrowse link
G GRIN3A glutamate ionotropic receptor NMDA type subunit 3A ISO RGD PMID:16477151 RGD:1642190 NCBI chr11:58,271,808...58,421,887
Ensembl chr11:58,273,377...58,421,761
JBrowse link
G HES7 hes family bHLH transcription factor 7 ISO (MGI:MGI:2152470|PMID:11641270)
(MGI:MGI:3046002|PMID:15170214)
MGI PMID:11641270, PMID:15170214 MGI:MGI:2152470, MGI:MGI:3046002 NCBI chr 5:32,944,351...32,950,433
Ensembl chr 5:32,944,037...32,947,591
JBrowse link
G KDM5C lysine demethylase 5C IEA UniProt GO_REF:0000043 NCBI chr  X:44,921,271...44,953,338
Ensembl chr  X:44,921,816...44,952,616
JBrowse link
G MAPK10 mitogen-activated protein kinase 10 IEA UniProt GO_REF:0000043 NCBI chr32:9,584,437...9,889,118
Ensembl chr32:9,575,492...9,884,325
JBrowse link
G MAPK8 mitogen-activated protein kinase 8 IEA UniProt GO_REF:0000043 NCBI chr28:323,361...410,367
Ensembl chr28:368,513...406,401
JBrowse link
G MAPK9 mitogen-activated protein kinase 9 IEA UniProt GO_REF:0000043 NCBI chr11:1,443,528...1,480,501
Ensembl chr11:1,443,547...1,478,119
JBrowse link
G OGT O-linked N-acetylglucosamine (GlcNAc) transferase IEA UniProt GO_REF:0000043 NCBI chr  X:55,821,227...55,857,597
Ensembl chr  X:55,821,234...55,855,502
JBrowse link
G PPARG peroxisome proliferator activated receptor gamma IEA UniProt GO_REF:0000043 NCBI chr20:6,134,618...6,265,481
Ensembl chr20:6,050,357...6,207,981
JBrowse link
G PPARGC1A PPARG coactivator 1 alpha IEA UniProt GO_REF:0000043 NCBI chr 3:85,645,942...86,284,570
Ensembl chr 3:86,016,140...86,281,269
JBrowse link
G PRKAA1 protein kinase AMP-activated catalytic subunit alpha 1 IEA UniProt GO_REF:0000043 NCBI chr 4:68,579,061...68,614,548
Ensembl chr 4:68,579,037...68,611,841
JBrowse link
G PRKAA2 protein kinase AMP-activated catalytic subunit alpha 2 IEA UniProt GO_REF:0000043 NCBI chr 5:52,809,792...52,855,072
Ensembl chr 5:52,815,609...52,876,609
JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit IEA UniProt GO_REF:0000043 NCBI chr29:24,904...243,926
Ensembl chr29:35,007...243,895
JBrowse link
G PRMT5 protein arginine methyltransferase 5 IEA UniProt GO_REF:0000043 NCBI chr 8:3,248,349...3,257,567
Ensembl chr 8:3,248,404...3,257,456
JBrowse link
G SUV39H1 suppressor of variegation 3-9 homolog 1 IEA UniProt GO_REF:0000043 NCBI chr  X:41,894,623...41,907,854
Ensembl chr  X:41,893,045...41,906,403
JBrowse link
G SUV39H2 suppressor of variegation 3-9 homolog 2 IEA UniProt GO_REF:0000043 NCBI chr 2:21,715,677...21,749,732
Ensembl chr 2:21,728,964...21,749,597
JBrowse link
G TIMELESS timeless circadian regulator IEA UniProt GO_REF:0000043 NCBI chr10:671,829...701,152
Ensembl chr10:671,269...687,016
JBrowse link
G TP53 tumor protein p53 IEA UniProt GO_REF:0000043 NCBI chr 5:32,561,406...32,565,149
Ensembl chr 5:32,560,598...32,574,109
JBrowse link
G TP63 tumor protein p63 IEA UniProt GO_REF:0000043 NCBI chr34:21,766,861...21,985,095
Ensembl chr34:21,766,496...21,983,046
JBrowse link
G TP73 tumor protein p73 IEA UniProt GO_REF:0000043 NCBI chr 5:58,194,385...58,241,159
Ensembl chr 5:58,187,826...58,240,839
JBrowse link
G TSEN2 tRNA splicing endonuclease subunit 2 IEA UniProt GO_REF:0000043 NCBI chr20:6,031,295...6,090,938
Ensembl chr20:6,050,357...6,207,981
JBrowse link
antral ovarian follicle growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCNE1 cyclin E1 ISO RGD PMID:17084963 RGD:2289278 NCBI chr 1:121,688,622...121,697,533
Ensembl chr 1:121,688,796...121,697,649
JBrowse link
G CHAT choline O-acetyltransferase ISO RGD PMID:16846505 RGD:1600848 NCBI chr28:1,480,364...1,528,858
Ensembl chr28:1,482,202...1,528,776
JBrowse link
G ESR1 estrogen receptor 1 IEA Ensembl GO_REF:0000107 NCBI chr 1:42,081,952...42,368,544
Ensembl chr 1:42,081,969...42,368,544
JBrowse link
G FOXO3 forkhead box O3 IEA Ensembl GO_REF:0000107 NCBI chr12:65,552,455...65,673,467
Ensembl chr12:65,552,310...65,670,198
JBrowse link
G GAS2 growth arrest specific 2 IEA Ensembl GO_REF:0000107 NCBI chr21:44,277,996...44,406,210
Ensembl chr21:44,286,531...44,405,060
JBrowse link
G GPR149 G protein-coupled receptor 149 IEA Ensembl GO_REF:0000107 NCBI chr23:48,470,428...48,535,861
Ensembl chr23:48,471,701...48,535,195
JBrowse link
apoptotic process involved in luteolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ROBO2 roundabout guidance receptor 2 IEA Ensembl GO_REF:0000107 NCBI chr31:9,415,390...11,047,710
Ensembl chr31:9,419,026...11,022,392
JBrowse link
G SLIT2 slit guidance ligand 2 IEA Ensembl GO_REF:0000107 NCBI chr 3:88,964,707...89,311,817
Ensembl chr 3:88,966,232...89,312,955
JBrowse link
G SLIT3 slit guidance ligand 3 IEA Ensembl GO_REF:0000107 NCBI chr 4:42,506,680...43,099,053
Ensembl chr 4:42,508,426...43,094,714
JBrowse link
circadian behavior term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BTBD9 BTB domain containing 9 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:7,154,805...7,564,050
Ensembl chr12:7,154,925...7,564,017
JBrowse link
G CSNK1E casein kinase 1 epsilon ISO RGD PMID:17502429 RGD:10395242 NCBI chr10:26,386,646...26,412,429
Ensembl chr10:26,393,033...26,411,624
JBrowse link
G GPR157 G protein-coupled receptor 157 ISO (MGI:MGI:5825412|PMID:27142930) UniProtKB PMID:27142930 MGI:MGI:5825412 NCBI chr 5:62,453,338...62,471,614
Ensembl chr 5:62,454,921...62,508,970
JBrowse link
G GPR176 G protein-coupled receptor 176 IEA Ensembl GO_REF:0000107 NCBI chr30:6,990,463...7,120,361
Ensembl chr30:6,992,849...7,119,992
JBrowse link
G NR1D2 nuclear receptor subfamily 1 group D member 2 IEA Ensembl GO_REF:0000107 NCBI chr23:19,758,907...19,787,725
Ensembl chr23:19,762,052...19,787,614
JBrowse link
G SIX3 SIX homeobox 3 IEA Ensembl GO_REF:0000107 NCBI chr10:47,332,875...47,369,359
Ensembl chr10:47,332,888...47,343,635
JBrowse link
G TP53 tumor protein p53 ISS
IEA
UniProtKB
Ensembl
GO_REF:0000024, GO_REF:0000107 NCBI chr 5:32,561,406...32,565,149
Ensembl chr 5:32,560,598...32,574,109
JBrowse link
G USP2 ubiquitin specific peptidase 2 ISO (MGI:MGI:5607210|PMID:23213472) UniProtKB PMID:23213472 MGI:MGI:5607210 NCBI chr 5:14,525,685...14,550,914
Ensembl chr 5:14,525,797...14,549,291
JBrowse link
circadian regulation of gene expression term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADK adenosine kinase ISO RGD PMID:12675911 RGD:2291861 NCBI chr 4:24,540,626...25,047,032
Ensembl chr 4:24,540,659...25,046,464
JBrowse link
G AHR aryl hydrocarbon receptor ISO (MGI:MGI:4820700|PMID:20106950) UniProtKB PMID:20106950 MGI:MGI:4820700 NCBI chr14:31,743,704...31,793,484
Ensembl chr14:31,686,170...31,791,444
JBrowse link
G ARNTL aryl hydrocarbon receptor nuclear translocator like IEA Ensembl GO_REF:0000107 NCBI chr21:36,254,235...36,323,915
Ensembl chr21:36,290,070...36,323,622
JBrowse link
G ATF4 activating transcription factor 4 IEA Ensembl GO_REF:0000107 NCBI chr10:25,528,880...25,531,018
Ensembl chr10:25,528,874...25,530,993
JBrowse link
G BHLHE40 basic helix-loop-helix family member e40 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr20:12,641,872...12,647,519
Ensembl chr20:12,642,702...12,647,525
JBrowse link
G BHLHE41 basic helix-loop-helix family member e41 ISO (MGI:MGI:3798698|PMID:18411297) BHF-UCL PMID:18411297 MGI:MGI:3798698 NCBI chr27:21,464,302...21,469,119 JBrowse link
G CARTPT CART prepropeptide ISO PMID:15680948 HGNC PMID:15680948 RGD:8553315 NCBI chr 2:54,865,043...54,867,410
Ensembl chr 2:54,865,298...54,867,158
JBrowse link
G CAVIN3 caveolae associated protein 3 ISO (MGI:MGI:5508702|PMID:23079727) UniProtKB PMID:23079727 MGI:MGI:5508702 NCBI chr21:29,661,235...29,663,393
Ensembl chr21:29,661,980...29,716,313
JBrowse link
G CIART circadian associated repressor of transcription IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:59,524,715...59,529,535
Ensembl chr17:59,525,987...59,529,402
JBrowse link
G CLOCK clock circadian regulator IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr13:47,684,409...47,825,733
Ensembl chr13:47,691,709...47,758,784
JBrowse link
G CREM cAMP responsive element modulator ISO (MGI:MGI:5494765|PMID:23443664) UniProtKB PMID:23443664 MGI:MGI:5494765 NCBI chr 2:1,755,189...1,828,746
Ensembl chr 2:1,755,522...1,828,910
JBrowse link
G CRY1 cryptochrome circadian regulator 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:31,681,098...31,792,995
Ensembl chr10:31,681,288...31,780,306
JBrowse link
G CRY2 cryptochrome circadian regulator 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr18:43,538,335...43,573,651
Ensembl chr18:43,539,612...43,573,875
JBrowse link
G CSNK1D casein kinase 1 delta IEA Ensembl GO_REF:0000107 NCBI chr 9:83,395...110,309
Ensembl chr 9:73,215...110,269
JBrowse link
G CSNK1E casein kinase 1 epsilon IEA Ensembl GO_REF:0000107 NCBI chr10:26,386,646...26,412,429
Ensembl chr10:26,393,033...26,411,624
JBrowse link
G DRD2 dopamine receptor D2 IEA Ensembl GO_REF:0000107 NCBI chr 5:19,732,842...19,795,241
Ensembl chr 5:19,732,836...19,795,241
JBrowse link
G DRD3 dopamine receptor D3 IEA Ensembl GO_REF:0000107 NCBI chr33:18,369,362...18,414,465
Ensembl chr33:18,372,865...18,412,277
JBrowse link
G EGR1 early growth response 1 IEA Ensembl GO_REF:0000107 NCBI chr11:26,046,195...26,049,806
Ensembl chr11:26,046,228...26,048,575
JBrowse link
G GFPT1 glutamine--fructose-6-phosphate transaminase 1 IEA Ensembl GO_REF:0000107 NCBI chr10:68,067,817...68,125,001
Ensembl chr10:68,073,062...68,125,007
JBrowse link
G HDAC1 histone deacetylase 1 IEA Ensembl GO_REF:0000107 NCBI chr 2:68,901,339...68,936,473
Ensembl chr 2:68,901,651...68,936,186
JBrowse link
G HDAC2 histone deacetylase 2 ISO (MGI:MGI:5567917|PMID:15226430) UniProtKB PMID:15226430 MGI:MGI:5567917 NCBI chr12:70,053,822...70,083,491
Ensembl chr12:70,053,297...70,103,578
JBrowse link
G HDAC3 histone deacetylase 3 ISO (MGI:MGI:5882311|PMID:26776516)
(MGI:MGI:3821398|PMID:19037247)
UniProt
MGI
PMID:19037247, PMID:26776516 MGI:MGI:3821398, MGI:MGI:5882311 NCBI chr 2:36,583,283...36,598,121
Ensembl chr 2:36,583,283...36,597,682
JBrowse link
G HNF1B HNF1 homeobox B ISO RGD PMID:9545279 RGD:2312721 NCBI chr 9:37,437,992...37,493,200
Ensembl chr 9:37,438,583...37,492,993
JBrowse link
G HNRNPU heterogeneous nuclear ribonucleoprotein U IEA Ensembl GO_REF:0000107 NCBI chr 7:35,832,956...35,842,898
Ensembl chr 7:35,833,988...35,843,754
JBrowse link
G HUWE1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 IEA Ensembl GO_REF:0000107 NCBI chr  X:45,234,666...45,409,641
Ensembl chr  X:45,234,322...45,410,043
JBrowse link
G ID2 inhibitor of DNA binding 2 ISO (MGI:MGI:4420353|PMID:19740747) UniProtKB PMID:19740747 MGI:MGI:4420353 NCBI chr10:54,954,852...54,957,116 JBrowse link
G ID3 inhibitor of DNA binding 3, HLH protein IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:75,880,659...75,881,786
Ensembl chr 2:75,880,657...75,882,010
JBrowse link
G ID4 inhibitor of DNA binding 4, HLH protein IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr35:18,357,751...18,358,143
Ensembl chr35:18,357,826...18,359,011
JBrowse link
G KDM2A lysine demethylase 2A IEA Ensembl GO_REF:0000107 NCBI chr18:50,178,511...50,294,097
Ensembl chr18:50,181,024...50,291,127
JBrowse link
G KDM5A lysine demethylase 5A IEA Ensembl GO_REF:0000107 NCBI chr27:42,364,606...42,447,839
Ensembl chr27:42,360,456...42,447,821
JBrowse link
G KDM8 lysine demethylase 8 IEA Ensembl GO_REF:0000107 NCBI chr 6:19,366,813...19,390,082
Ensembl chr 6:19,366,331...19,380,257
JBrowse link
G KMT2A lysine methyltransferase 2A IEA Ensembl GO_REF:0000107 NCBI chr 5:15,212,559...15,302,825
Ensembl chr 5:15,217,348...15,270,971
JBrowse link
G LGR4 leucine rich repeat containing G protein-coupled receptor 4 IEA Ensembl GO_REF:0000107 NCBI chr21:47,952,019...47,995,530
Ensembl chr21:47,952,890...47,996,288
JBrowse link
G MAGED1 MAGE family member D1 ISO (MGI:MGI:5508569|PMID:20300063) UniProtKB PMID:20300063 MGI:MGI:5508569 NCBI chr  X:44,395,091...44,458,705
Ensembl chr  X:44,395,015...44,458,705
JBrowse link
G MC3R melanocortin 3 receptor IEA Ensembl GO_REF:0000107 NCBI chr24:41,492,371...41,494,033
Ensembl chr24:41,492,371...41,494,033
JBrowse link
G MTA1 metastasis associated 1 ISO (MGI:MGI:5582861|PMID:24089055) UniProtKB PMID:24089055 MGI:MGI:5582861 NCBI chr 8:72,752,894...72,772,236
Ensembl chr 8:72,753,178...72,772,762
JBrowse link
G MYBBP1A MYB binding protein 1a IEA Ensembl GO_REF:0000107 NCBI chr 5:30,528,141...30,538,815
Ensembl chr 5:30,526,720...30,539,483
JBrowse link
G MYCBP2 MYC binding protein 2 IEA Ensembl GO_REF:0000107 NCBI chr22:30,614,692...30,874,173
Ensembl chr22:30,615,369...30,874,370
JBrowse link
G NAMPT nicotinamide phosphoribosyltransferase IEA UniProt GO_REF:0000104 NCBI chr18:14,110,045...14,211,268
Ensembl chr18:13,993,022...14,208,657
JBrowse link
G NCOA2 nuclear receptor coactivator 2 IEA Ensembl GO_REF:0000107 NCBI chr29:19,253,849...19,471,640
Ensembl chr29:19,222,842...19,545,371
JBrowse link
G NCOR1 nuclear receptor corepressor 1 ISO (MGI:MGI:3821398|PMID:19037247) MGI PMID:19037247 MGI:MGI:3821398 NCBI chr 5:39,687,530...39,837,003
Ensembl chr 5:39,687,543...39,836,464
JBrowse link
G NGFR nerve growth factor receptor ISO (MGI:MGI:5503234|PMID:23785138) UniProtKB PMID:23785138 MGI:MGI:5503234 NCBI chr 9:25,598,468...25,621,021
Ensembl chr 9:25,601,074...25,623,274
JBrowse link
G NOCT nocturnin IEA Ensembl GO_REF:0000107 NCBI chr19:3,587,769...3,612,184
Ensembl chr19:3,588,695...3,609,307
JBrowse link
G NPAS2 neuronal PAS domain protein 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:41,846,766...42,005,058
Ensembl chr10:41,847,625...42,005,469
JBrowse link
G NR0B2 nuclear receptor subfamily 0 group B member 2 IEA Ensembl GO_REF:0000107 NCBI chr 2:73,234,482...73,236,548
Ensembl chr 2:73,234,586...73,236,206
JBrowse link
G NR1D1 nuclear receptor subfamily 1 group D member 1 IEA Ensembl GO_REF:0000107 NCBI chr 9:22,461,556...22,469,243
Ensembl chr 9:22,461,705...22,469,053
JBrowse link
G NRIP1 nuclear receptor interacting protein 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr31:11,852,330...11,951,735
Ensembl chr31:11,855,338...11,932,056
JBrowse link
G OGT O-linked N-acetylglucosamine (GlcNAc) transferase IEA Ensembl GO_REF:0000107 NCBI chr  X:55,821,227...55,857,597
Ensembl chr  X:55,821,234...55,855,502
JBrowse link
G PASD1 PAS domain containing repressor 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:119,536,333...119,629,452
Ensembl chr  X:119,536,268...119,629,451
JBrowse link
G PER1 period circadian regulator 1 IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr 5:32,957,517...32,972,368
Ensembl chr 5:32,957,127...32,968,465
JBrowse link
G PER2 period circadian regulator 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr25:48,716,499...48,761,617
Ensembl chr25:48,717,173...48,758,755
JBrowse link
G PER3 period circadian regulator 3 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:61,445,580...61,499,393
Ensembl chr 5:61,445,461...61,498,499
JBrowse link
G PML PML nuclear body scaffold IEA Ensembl GO_REF:0000107 NCBI chr30:37,232,337...37,278,434
Ensembl chr30:37,232,306...37,277,741
JBrowse link
G PPARA peroxisome proliferator activated receptor alpha ISS
IEA
UniProtKB
Ensembl
GO_REF:0000024, GO_REF:0000107 NCBI chr10:19,934,020...20,006,096
Ensembl chr10:19,934,165...20,006,146
JBrowse link
G PPARGC1A PPARG coactivator 1 alpha IEA Ensembl GO_REF:0000107 NCBI chr 3:85,645,942...86,284,570
Ensembl chr 3:86,016,140...86,281,269
JBrowse link
G PPP1CA protein phosphatase 1 catalytic subunit alpha ISS
IEA
UniProtKB
Ensembl
GO_REF:0000024, GO_REF:0000107 NCBI chr18:50,062,352...50,065,166
Ensembl chr18:50,062,352...50,065,166
JBrowse link
G PPP1CB protein phosphatase 1 catalytic subunit beta IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr17:22,680,691...22,699,999
Ensembl chr17:22,679,783...22,699,999
JBrowse link
G PPP1CC protein phosphatase 1 catalytic subunit gamma ISO (MGI:MGI:5294280|PMID:21930935) UniProt PMID:21930935 MGI:MGI:5294280 NCBI chr26:8,497,350...8,518,467
Ensembl chr26:8,495,067...8,518,675
JBrowse link
G PRKG2 protein kinase cGMP-dependent 2 ISO (MGI:MGI:3630244|PMID:12725729) MGI PMID:12725729 MGI:MGI:3630244 NCBI chr32:5,266,435...5,365,396
Ensembl chr32:5,266,442...5,365,396
JBrowse link
G PRMT5 protein arginine methyltransferase 5 ISO (MGI:MGI:5464222|PMID:23133559) UniProtKB PMID:23133559 MGI:MGI:5464222 NCBI chr 8:3,248,349...3,257,567
Ensembl chr 8:3,248,404...3,257,456
JBrowse link
G RAI1 retinoic acid induced 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:41,687,436...41,797,354
Ensembl chr 5:41,688,479...41,808,918
JBrowse link
G RBM4B RNA binding motif protein 4B IEA Ensembl GO_REF:0000107 NCBI chr18:50,676,138...50,686,061
Ensembl chr18:50,676,162...50,685,573
JBrowse link
G RELB RELB proto-oncogene, NF-kB subunit IEA Ensembl GO_REF:0000107 NCBI chr 1:110,436,677...110,466,709
Ensembl chr 1:110,436,662...110,466,809
JBrowse link
G RORA RAR related orphan receptor A IEA Ensembl GO_REF:0000107 NCBI chr30:25,315,974...26,026,708
Ensembl chr30:25,325,275...26,026,623
JBrowse link
G RORC RAR related orphan receptor C ISO (MGI:MGI:5504349|PMID:22753030), (MGI:MGI:5582866|PMID:23723244) UniProtKB PMID:22753030, PMID:23723244 MGI:MGI:5504349, MGI:MGI:5582866 NCBI chr17:60,821,498...60,842,485
Ensembl chr17:60,821,981...60,842,453
JBrowse link
G SIRT1 sirtuin 1 ISO (MGI:MGI:3807721|PMID:18662546), (MGI:MGI:3843127|PMID:19299583)
(PMID:18662546)
UniProtKB PMID:18662546, PMID:19299583 MGI:MGI:3807721, MGI:MGI:3843127 NCBI chr 4:19,188,616...19,220,031
Ensembl chr 4:19,188,675...19,218,279
JBrowse link
G TOP1 DNA topoisomerase I IEA Ensembl GO_REF:0000107 NCBI chr24:29,075,267...29,166,733
Ensembl chr24:29,075,492...29,165,864
JBrowse link
G USP2 ubiquitin specific peptidase 2 IEA Ensembl GO_REF:0000107 NCBI chr 5:14,525,685...14,550,914
Ensembl chr 5:14,525,797...14,549,291
JBrowse link
G ZFHX3 zinc finger homeobox 3 ISO (MGI:MGI:5660827|PMID:26232227) UniProtKB PMID:26232227 MGI:MGI:5660827 NCBI chr 5:78,450,963...78,635,615
Ensembl chr 5:78,455,005...78,610,033
JBrowse link
G ZPBP2 zona pellucida binding protein 2 ISO (MGI:MGI:6364050|PMID:31560728) MGI PMID:31560728 MGI:MGI:6364050 NCBI chr 9:22,632,114...22,639,507
Ensembl chr 9:22,632,444...22,639,338
JBrowse link
circadian regulation of translation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HNRNPD heterogeneous nuclear ribonucleoprotein D IEA Ensembl GO_REF:0000107 NCBI chr32:6,323,444...6,341,238
Ensembl chr32:6,323,469...6,341,166
JBrowse link
G PER1 period circadian regulator 1 IEA Ensembl GO_REF:0000107 NCBI chr 5:32,957,517...32,972,368
Ensembl chr 5:32,957,127...32,968,465
JBrowse link
G PER2 period circadian regulator 2 ISO (MGI:MGI:1935010|PMID:11395012) UniProtKB PMID:11395012 MGI:MGI:1935010 NCBI chr25:48,716,499...48,761,617
Ensembl chr25:48,717,173...48,758,755
JBrowse link
circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AANAT aralkylamine N-acetyltransferase ISS UniProt GO_REF:0000024 NCBI chr 9:4,238,814...4,245,660
Ensembl chr 9:4,239,284...4,240,707
JBrowse link
G ABCB1 ATP binding cassette subfamily B member 1 ISO RGD PMID:20668054 RGD:4890035 NCBI chr14:13,644,891...13,852,829
Ensembl chr14:13,542,647...13,742,727
JBrowse link
G ACTB actin beta ISO RGD PMID:9483199 RGD:11552588 NCBI chr 6:12,421,006...12,424,449
Ensembl chr 6:12,418,932...12,462,845
JBrowse link
G ADCY1 adenylate cyclase 1 ISO RGD PMID:8855334 RGD:1625750 NCBI chr16:1,064,644...1,166,864
Ensembl chr16:1,037,162...1,167,094
JBrowse link
G ADCY6 adenylate cyclase 6 ISO RGD PMID:16166080 RGD:2312676 NCBI chr27:5,739,514...5,752,888
Ensembl chr27:5,733,586...5,752,888
JBrowse link
G ADIPOQ adiponectin, C1Q and collagen domain containing ISO RGD PMID:21164040 RGD:5128545 NCBI chr34:19,398,310...19,410,519
Ensembl chr34:19,354,825...19,409,844
JBrowse link
G AGRP agouti related neuropeptide ISO RGD PMID:21060311 RGD:8693680 NCBI chr 5:81,924,249...81,926,510
Ensembl chr 5:81,925,055...81,925,845
JBrowse link
G ARNTL aryl hydrocarbon receptor nuclear translocator like ISO (MGI:MGI:3703208|PMID:17264215)
(MGI:MGI:1928563|PMID:11163178)
(MGI:MGI:2179885|PMID:12024206), (MGI:MGI:2183702|PMID:12150932), (MGI:MGI:2667759|PMID:12843397), (MGI:MGI:2669067|PMID:12897057)
(PMID:14645221), (PMID:19217292), (PMID:19740747)
MGI
UniProtKB
RGD
PMID:9735336, PMID:9878515, PMID:11163178, PMID:12024206, PMID:12150932, PMID:12843397, PMID:12897057, PMID:14645221, PMID:17264215, PMID:19217292, PMID:19740747 MGI:MGI:1928563, MGI:MGI:2179885, MGI:MGI:2183702, MGI:MGI:2667759, MGI:MGI:2669067, MGI:MGI:3703208, RGD:10043346, RGD:67927 NCBI chr21:36,254,235...36,323,915
Ensembl chr21:36,290,070...36,323,622
JBrowse link
G ARNTL2 aryl hydrocarbon receptor nuclear translocator like 2 IEA Ensembl GO_REF:0000107 NCBI chr27:20,304,404...20,420,086
Ensembl chr27:20,306,705...20,420,736
JBrowse link
G ASS1 argininosuccinate synthase 1 IEA Ensembl GO_REF:0000107 NCBI chr 9:53,425,228...53,478,007
Ensembl chr 9:53,425,448...53,477,904
JBrowse link
G ATF4 activating transcription factor 4 ISO (PMID:21768648) UniProtKB PMID:21768648 NCBI chr10:25,528,880...25,531,018
Ensembl chr10:25,528,874...25,530,993
JBrowse link
G ATF5 activating transcription factor 5 ISO (PMID:21768648) UniProtKB PMID:21768648 NCBI chr 1:106,631,711...106,636,477
Ensembl chr 1:106,632,353...106,636,502
JBrowse link
G ATOH7 atonal bHLH transcription factor 7 ISO (MGI:MGI:2445865|PMID:12451142) MGI PMID:12451142 MGI:MGI:2445865 NCBI chr 4:19,466,476...19,479,279
Ensembl chr 4:19,478,694...19,479,152
JBrowse link
G ATP7B ATPase copper transporting beta ISO RGD PMID:9920665 RGD:1599396 NCBI chr22:162,474...225,599
Ensembl chr22:191,888...225,266
JBrowse link
G BDNF brain derived neurotrophic factor IEA Ensembl GO_REF:0000107 NCBI chr21:48,191,580...48,243,699
Ensembl chr21:48,192,670...48,204,480
JBrowse link
G BHLHE40 basic helix-loop-helix family member e40 ISO (PMID:28797635)
(PMID:15038852), (PMID:19786558)
PMID:12397359
UniProt
UniProtKB
PMID:12397359, PMID:15038852, PMID:19786558, PMID:28797635 RGD:625726 NCBI chr20:12,641,872...12,647,519
Ensembl chr20:12,642,702...12,647,525
JBrowse link
G BHLHE41 basic helix-loop-helix family member e41 ISO PMID:12397359
(PMID:15038852), (PMID:19786558)
UniProt
UniProtKB
PMID:12397359, PMID:15038852, PMID:19786558 RGD:625726 NCBI chr27:21,464,302...21,469,119 JBrowse link
G CDK4 cyclin dependent kinase 4 ISO RGD PMID:11598123 RGD:70761 NCBI chr10:1,812,864...1,815,815
Ensembl chr10:1,812,886...1,815,789
JBrowse link
G CLDN4 claudin 4 ISO RGD PMID:20091493 RGD:8693638 NCBI chr 6:6,492,706...6,506,750
Ensembl chr 6:6,493,513...6,494,145
JBrowse link
G CLOCK clock circadian regulator ISO (MGI:MGI:2669067|PMID:12897057)
(MGI:MGI:2179885|PMID:12024206), (MGI:MGI:66027|PMID:8171325)
(PMID:14645221)
MGI
RGD
UniProtKB
PMID:8171325, PMID:10471199, PMID:12024206, PMID:12897057, PMID:14645221 MGI:MGI:2179885, MGI:MGI:2669067, MGI:MGI:66027, RGD:10401879 NCBI chr13:47,684,409...47,825,733
Ensembl chr13:47,691,709...47,758,784
JBrowse link
G CREB1 cAMP responsive element binding protein 1 IEA Ensembl GO_REF:0000107 NCBI chr37:15,921,214...15,978,492
Ensembl chr37:15,939,138...15,977,556
JBrowse link
G CREM cAMP responsive element modulator ISO (PMID:23443664) UniProtKB PMID:23443664 NCBI chr 2:1,755,189...1,828,746
Ensembl chr 2:1,755,522...1,828,910
JBrowse link
G CRX cone-rod homeobox ISO RGD PMID:9465110 RGD:1600977 NCBI chr 1:108,249,911...108,261,015
Ensembl chr 1:108,249,911...108,261,010
JBrowse link
G CRY1 cryptochrome circadian regulator 1 ISO (PMID:23133559)
(MGI:MGI:2179885|PMID:12024206)
(MGI:MGI:3703208|PMID:17264215), (MGI:MGI:6294193|PMID:29561690)
(MGI:MGI:2667759|PMID:12843397)
UniProtKB
MGI
PMID:12024206, PMID:12843397, PMID:17264215, PMID:23133559, PMID:29561690 MGI:MGI:2179885, MGI:MGI:2667759, MGI:MGI:3703208, MGI:MGI:6294193 NCBI chr10:31,681,098...31,792,995
Ensembl chr10:31,681,288...31,780,306
JBrowse link
G CRY2 cryptochrome circadian regulator 2 ISO (MGI:MGI:2179885|PMID:12024206)
(MGI:MGI:3703208|PMID:17264215), (MGI:MGI:4461092|PMID:20123978), (MGI:MGI:6294193|PMID:29561690)
RGD
MGI
PMID:11804325, PMID:12024206, PMID:17264215, PMID:20123978, PMID:29561690 MGI:MGI:2179885, MGI:MGI:3703208, MGI:MGI:4461092, MGI:MGI:6294193, RGD:632584 NCBI chr18:43,538,335...43,573,651
Ensembl chr18:43,539,612...43,573,875
JBrowse link
G CYP7B1 cytochrome P450 family 7 subfamily B member 1 ISO RGD PMID:12759897 RGD:1298869 NCBI chr29:14,443,036...14,613,839
Ensembl chr29:14,444,853...14,613,755
JBrowse link
G DBP D-box binding PAR bZIP transcription factor IEA InterPro GO_REF:0000002 NCBI chr 1:107,675,138...107,681,246
Ensembl chr 1:107,675,477...107,681,204
JBrowse link
G DDC dopa decarboxylase ISO RGD PMID:12047348 RGD:727571 NCBI chr18:1,802,239...1,876,714
Ensembl chr18:1,803,273...1,867,616
JBrowse link
G DDX5 DEAD-box helicase 5 ISO (MGI:MGI:5430667|PMID:22767893) MGI PMID:22767893 MGI:MGI:5430667 NCBI chr 9:12,300,706...12,307,931
Ensembl chr 9:12,300,708...12,307,663
JBrowse link
G DHX9 DExH-box helicase 9 ISO (MGI:MGI:5430667|PMID:22767893) MGI PMID:22767893 MGI:MGI:5430667 NCBI chr 7:16,233,763...16,292,576
Ensembl chr 7:16,233,814...16,292,618
JBrowse link
G DPYD dihydropyrimidine dehydrogenase ISO RGD PMID:3202908, PMID:8504424, PMID:19628084 RGD:11251745, RGD:1599793, RGD:5133425 NCBI chr 6:51,789,786...52,564,802
Ensembl chr 6:51,814,573...52,580,923
JBrowse link
G DYRK1A dual specificity tyrosine phosphorylation regulated kinase 1A IEA Ensembl GO_REF:0000107 NCBI chr31:32,564,970...32,655,232
Ensembl chr31:32,511,502...32,652,572
JBrowse link
G EGFR epidermal growth factor receptor ISO RGD PMID:12454858 RGD:2289959 NCBI chr18:5,983,669...6,044,092
Ensembl chr18:5,982,770...6,042,631
JBrowse link
G EGR1 early growth response 1 ISO RGD PMID:21363938 RGD:5131656 NCBI chr11:26,046,195...26,049,806
Ensembl chr11:26,046,228...26,048,575
JBrowse link
G EP300 E1A binding protein p300 IEA Ensembl GO_REF:0000107 NCBI chr10:24,076,538...24,156,708
Ensembl chr10:24,077,971...24,156,396
JBrowse link
G ERBB3 erb-b2 receptor tyrosine kinase 3 ISO RGD PMID:12454858 RGD:2289959 NCBI chr10:406,856...424,746
Ensembl chr10:406,633...424,264
JBrowse link
G F7 coagulation factor VII ISO RGD PMID:2607889 RGD:2312319 NCBI chr22:60,572,459...60,582,743
Ensembl chr22:60,571,822...60,597,024
JBrowse link
G FAS Fas cell surface death receptor ISO (PMID:23785138) UniProtKB PMID:23785138 NCBI chr26:38,738,811...38,763,298
Ensembl chr26:38,737,611...38,763,321
JBrowse link
G FOSL2 FOS like 2, AP-1 transcription factor subunit ISO RGD PMID:10987819, PMID:21367864 RGD:2293795, RGD:7247438 NCBI chr17:22,340,469...22,364,994
Ensembl chr17:22,341,322...22,361,772
JBrowse link
G GNRHR gonadotropin releasing hormone receptor ISO PMID:22356123 UniProt PMID:22356123 RGD:8661632 NCBI chr13:58,253,112...58,266,600
Ensembl chr13:58,253,027...58,266,705
JBrowse link
G GSK3B glycogen synthase kinase 3 beta ISO (MGI:MGI:4461092|PMID:20123978) UniProtKB PMID:20123978 MGI:MGI:4461092 NCBI chr33:23,458,369...23,659,878
Ensembl chr33:23,463,767...23,659,666
JBrowse link
G HDAC1 histone deacetylase 1 ISO (MGI:MGI:5568140|PMID:24736997) UniProtKB PMID:24736997 MGI:MGI:5568140 NCBI chr 2:68,901,339...68,936,473
Ensembl chr 2:68,901,651...68,936,186
JBrowse link
G HMGB1 high mobility group box 1 ISO RGD PMID:17226794 RGD:2316777 NCBI chr25:9,431,223...9,558,167
Ensembl chr25:9,431,218...9,558,165
JBrowse link
G HNRNPL heterogeneous nuclear ribonucleoprotein L ISO RGD PMID:15798208 RGD:9854643 NCBI chr 1:114,267,195...114,279,107
Ensembl chr 1:114,267,210...114,278,837
JBrowse link
G HNRNPR heterogeneous nuclear ribonucleoprotein R ISO RGD PMID:15798208 RGD:9854643 NCBI chr 2:76,073,553...76,108,763
Ensembl chr 2:76,077,022...76,105,433
JBrowse link
G HOMER1 homer scaffold protein 1 ISO RGD PMID:15308308 RGD:2316907 NCBI chr 3:27,395,337...27,525,822
Ensembl chr 3:27,400,839...27,523,320
JBrowse link
G HS3ST2 heparan sulfate-glucosamine 3-sulfotransferase 2 ISO RGD PMID:12601002 RGD:1299550 NCBI chr 6:22,814,966...22,905,633
Ensembl chr 6:22,815,738...22,906,537
JBrowse link
G HTR7 5-hydroxytryptamine receptor 7 IEA InterPro GO_REF:0000002 NCBI chr28:5,438,872...5,524,385
Ensembl chr28:5,440,388...5,524,191
JBrowse link
G ID1 inhibitor of DNA binding 1, HLH protein IEA Ensembl GO_REF:0000107 NCBI chr24:21,094,339...21,096,276
Ensembl chr24:21,094,755...21,096,276
JBrowse link
G ID2 inhibitor of DNA binding 2 ISO (PMID:19217292), (PMID:19740747) UniProtKB PMID:19217292, PMID:19740747 NCBI chr10:54,954,852...54,957,116 JBrowse link
G ID3 inhibitor of DNA binding 3, HLH protein ISO (PMID:19217292) UniProtKB PMID:19217292 NCBI chr 2:75,880,659...75,881,786
Ensembl chr 2:75,880,657...75,882,010
JBrowse link
G ID4 inhibitor of DNA binding 4, HLH protein ISO (PMID:19217292) UniProtKB PMID:19217292 NCBI chr35:18,357,751...18,358,143
Ensembl chr35:18,357,826...18,359,011
JBrowse link
G IGF1 insulin like growth factor 1 ISO (PMID:20685873) UniProtKB PMID:20685873 NCBI chr15:41,203,320...41,275,964
Ensembl chr15:41,202,518...41,275,794
JBrowse link
G IMPDH2 inosine monophosphate dehydrogenase 2 IEA Ensembl GO_REF:0000107 NCBI chr20:40,136,106...40,140,983
Ensembl chr20:40,136,154...40,140,972
JBrowse link
G JUN Jun proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:10987819 RGD:2293795 NCBI chr 5:50,966,698...50,968,939 JBrowse link
G JUND JunD proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:10987819 RGD:2293795 NCBI chr20:44,737,021...44,738,932
Ensembl chr20:44,736,832...44,763,020
JBrowse link
G KCNH7 potassium voltage-gated channel subfamily H member 7 ISO RGD PMID:17322986 RGD:2314391 NCBI chr36:7,781,323...8,260,893
Ensembl chr36:7,649,727...8,261,048
JBrowse link
G KCNMA1 potassium calcium-activated channel subfamily M alpha 1 ISA (PMID:8973172) AgBase PMID:8973172 NCBI chr 4:26,844,250...27,338,271
Ensembl chr 4:26,844,250...27,555,776
JBrowse link
G KLF10 Kruppel like factor 10 IEA Ensembl GO_REF:0000107 NCBI chr13:4,216,745...4,223,708
Ensembl chr13:4,218,084...4,223,691
JBrowse link
G KLF9 Kruppel like factor 9 IEA Ensembl GO_REF:0000107 NCBI chr 1:87,109,310...87,164,636
Ensembl chr 1:87,109,450...87,111,525
JBrowse link
G LEP leptin ISO RGD PMID:21164040 RGD:5128545 NCBI chr14:8,115,396...8,130,946
Ensembl chr14:8,116,122...8,131,395
JBrowse link
G LGR4 leucine rich repeat containing G protein-coupled receptor 4 ISO (PMID:24353284) UniProtKB PMID:24353284 NCBI chr21:47,952,019...47,995,530
Ensembl chr21:47,952,890...47,996,288
JBrowse link
G LIPC lipase C, hepatic type ISO plasma hepatic lipase activity RGD PMID:9728079 RGD:2307452 NCBI chr30:23,432,460...23,584,037
Ensembl chr30:23,432,493...23,584,037
JBrowse link
G LOC610540 pulmonary surfactant-associated protein A-like ISO RGD PMID:12872443 RGD:4143473 NCBI chr 4:29,430,139...29,434,640 JBrowse link
G MAT2A methionine adenosyltransferase 2A ISO RGD PMID:15504733 RGD:1598692 NCBI chr17:39,525,635...39,532,512
Ensembl chr17:39,525,626...39,532,512
JBrowse link
G METTL3 methyltransferase like 3 ISO (MGI:MGI:5527005|PMID:24209618) UniProtKB PMID:24209618 MGI:MGI:5527005 NCBI chr15:18,528,755...18,546,303
Ensembl chr15:18,528,772...18,546,531
JBrowse link
G MTNR1A melatonin receptor 1A ISO RGD PMID:23895529 RGD:9686056 NCBI chr16:44,258,239...44,286,761 JBrowse link
G MTTP microsomal triglyceride transfer protein IEA Ensembl GO_REF:0000107 NCBI chr32:21,582,368...21,626,806
Ensembl chr32:21,570,801...21,628,624
JBrowse link
G NAMPT nicotinamide phosphoribosyltransferase ISO (PMID:19299583) UniProtKB
RGD
PMID:19299583, PMID:26547053 RGD:13781893 NCBI chr18:14,110,045...14,211,268
Ensembl chr18:13,993,022...14,208,657
JBrowse link
G NCOA2 nuclear receptor coactivator 2 ISO (PMID:24529706) UniProtKB PMID:24529706 NCBI chr29:19,253,849...19,471,640
Ensembl chr29:19,222,842...19,545,371
JBrowse link
G NDUFA9 NADH:ubiquinone oxidoreductase subunit A9 IEA Ensembl GO_REF:0000107 NCBI chr27:40,176,090...40,217,293
Ensembl chr27:40,167,293...40,217,190
JBrowse link
G NFIL3 nuclear factor, interleukin 3 regulated IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:95,508,224...95,510,452
Ensembl chr 1:95,508,764...95,510,152
JBrowse link
G NGF nerve growth factor ISO (PMID:23785138) UniProtKB PMID:23785138 NCBI chr17:52,900,647...52,901,607
Ensembl chr17:52,900,647...52,901,607
JBrowse link
G NGFR nerve growth factor receptor ISO (PMID:23785138) UniProtKB PMID:23785138 NCBI chr 9:25,598,468...25,621,021
Ensembl chr 9:25,601,074...25,623,274
JBrowse link
G NOCT nocturnin ISO (PMID:20685873), (PMID:22073225) UniProtKB PMID:20685873, PMID:22073225 NCBI chr19:3,587,769...3,612,184
Ensembl chr19:3,588,695...3,609,307
JBrowse link
G NONO non-POU domain containing octamer binding ISO PMID:15860628 UniProt PMID:15860628 RGD:1579815 NCBI chr  X:55,618,032...55,632,237
Ensembl chr  X:55,618,095...55,631,388
JBrowse link
G NOS2 nitric oxide synthase 2 IEA Ensembl GO_REF:0000107 NCBI chr 9:42,171,821...42,210,217
Ensembl chr 9:42,171,821...42,208,588
JBrowse link
G NPAS2 neuronal PAS domain protein 2 ISO (PMID:14645221) UniProtKB PMID:14645221 NCBI chr10:41,846,766...42,005,058
Ensembl chr10:41,847,625...42,005,469
JBrowse link
G NR0B2 nuclear receptor subfamily 0 group B member 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:73,234,482...73,236,548
Ensembl chr 2:73,234,586...73,236,206
JBrowse link
G NR1D1 nuclear receptor subfamily 1 group D member 1 ISO (MGI:MGI:2183702|PMID:12150932)
(PMID:14645221)
MGI
RGD
UniProtKB
PMID:12150932, PMID:14645221, PMID:24144766 MGI:MGI:2183702, RGD:10448984 NCBI chr 9:22,461,556...22,469,243
Ensembl chr 9:22,461,705...22,469,053
JBrowse link
G NR3C1 nuclear receptor subfamily 3 group C member 1 ISO RGD PMID:16673181 RGD:4892105 NCBI chr 2:38,124,568...38,242,510
Ensembl chr 2:38,123,190...38,240,755
JBrowse link
G NRIP1 nuclear receptor interacting protein 1 ISO (PMID:21628546) UniProtKB PMID:21628546 NCBI chr31:11,852,330...11,951,735
Ensembl chr31:11,855,338...11,932,056
JBrowse link
G NRXN1 neurexin 1 ISO RGD PMID:22662246 RGD:13207344 NCBI chr10:51,555,660...52,666,774
Ensembl chr10:51,558,452...52,667,569
JBrowse link
G NTRK1 neurotrophic receptor tyrosine kinase 1 IEA Ensembl GO_REF:0000107 NCBI chr 7:41,140,931...41,159,326
Ensembl chr 7:41,140,879...41,159,288
JBrowse link
G NTRK2 neurotrophic receptor tyrosine kinase 2 IEA Ensembl GO_REF:0000107 NCBI chr 1:74,447,927...74,777,910
Ensembl chr 1:74,449,060...74,777,032
JBrowse link
G NTRK3 neurotrophic receptor tyrosine kinase 3 IEA Ensembl GO_REF:0000107 NCBI chr 3:51,131,470...51,491,112
Ensembl chr 3:51,138,751...51,513,024
JBrowse link
G PAX4 paired box 4 ISO RGD PMID:19012751 RGD:2311636 NCBI chr14:8,714,251...8,719,387
Ensembl chr14:8,714,949...8,719,371
JBrowse link
G PDIA3 protein disulfide isomerase family A member 3 ISO RGD PMID:16375900 RGD:9999182 NCBI chr30:10,487,926...10,513,437
Ensembl chr30:10,487,921...10,513,397
JBrowse link
G PER1 period circadian regulator 1 ISO (PMID:14645221), (PMID:15038852), (PMID:19740747), (PMID:20106950), (PMID:23133559), (PMID:23443664), (PMID:23785138)
PMID:15094047
UniProtKB
UniProt
RGD
PMID:11122332, PMID:12176169, PMID:14645221, PMID:15038852, PMID:15094047, PMID:19740747, PMID:20106950, PMID:23133559, PMID:23443664, PMID:23785138 RGD:1299576, RGD:631234, RGD:8554359 NCBI chr 5:32,957,517...32,972,368
Ensembl chr 5:32,957,127...32,968,465
JBrowse link
G PER2 period circadian regulator 2 ISO (MGI:MGI:2667759|PMID:12843397)
(PMID:14645221), (PMID:19217292), (PMID:19740747), (PMID:23785138)
PMID:15094047
MGI
RGD
UniProtKB
UniProt
PMID:9765215, PMID:9878515, PMID:12843397, PMID:14645221, PMID:15094047, PMID:19217292, PMID:19740747, PMID:23785138 MGI:MGI:2667759, RGD:10043346, RGD:61691, RGD:8554359 NCBI chr25:48,716,499...48,761,617
Ensembl chr25:48,717,173...48,758,755
JBrowse link
G PER3 period circadian regulator 3 ISO (MGI:MGI:2667759|PMID:12843397) MGI PMID:12843397 MGI:MGI:2667759 NCBI chr 5:61,445,580...61,499,393
Ensembl chr 5:61,445,461...61,498,499
JBrowse link
G PHLPP1 PH domain and leucine rich repeat protein phosphatase 1 ISO RGD PMID:10570941 RGD:633914 NCBI chr 1:14,027,741...14,234,229
Ensembl chr 1:14,028,652...14,234,229
JBrowse link
G PRF1 perforin 1 ISO RGD PMID:16309885 RGD:1599931 NCBI chr 4:21,497,865...21,502,429
Ensembl chr 4:21,498,249...21,500,864
JBrowse link
G PRKG2 protein kinase cGMP-dependent 2 ISO (MGI:MGI:3630244|PMID:12725729) MGI PMID:12725729 MGI:MGI:3630244 NCBI chr32:5,266,435...5,365,396
Ensembl chr32:5,266,442...5,365,396
JBrowse link
G PRL prolactin ISO RGD PMID:17726143 RGD:1642564 NCBI chr35:20,673,830...20,683,824
Ensembl chr35:20,673,839...20,683,824
JBrowse link
G PROK1 prokineticin 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:41,544,966...41,550,793
Ensembl chr 6:41,547,796...41,550,603
JBrowse link
G PROK2 prokineticin 2 IEA Ensembl GO_REF:0000107 Ensembl chr20:20,248,829...20,258,390 JBrowse link
G PROKR2 prokineticin receptor 2 ISO (MGI:MGI:2179885|PMID:12024206) MGI PMID:12024206 MGI:MGI:2179885 NCBI chr24:16,351,912...16,364,139
Ensembl chr24:16,351,806...16,375,217
JBrowse link
G PROX1 prospero homeobox 1 IEA Ensembl GO_REF:0000107 NCBI chr 7:11,996,282...12,047,693
Ensembl chr 7:11,996,703...12,044,036
JBrowse link
G RBM4B RNA binding motif protein 4B ISO (MGI:MGI:3703208|PMID:17264215) UniProtKB PMID:17264215 MGI:MGI:3703208 NCBI chr18:50,676,138...50,686,061
Ensembl chr18:50,676,162...50,685,573
JBrowse link
G RORA RAR related orphan receptor A ISO RGD PMID:15781226 RGD:2325957 NCBI chr30:25,315,974...26,026,708
Ensembl chr30:25,325,275...26,026,623
JBrowse link
G RORB RAR related orphan receptor B ISO RGD PMID:15781226, PMID:18321474 RGD:2301031, RGD:2325957 NCBI chr 1:83,470,569...83,666,200
Ensembl chr 1:83,476,816...83,666,061
JBrowse link
G RORC RAR related orphan receptor C ISO RGD PMID:15781226 RGD:2325957 NCBI chr17:60,821,498...60,842,485
Ensembl chr17:60,821,981...60,842,453
JBrowse link
G RPE65 retinoid isomerohydrolase RPE65 ISO RGD PMID:12742352 RGD:9585648 NCBI chr 6:76,887,399...76,911,133
Ensembl chr 6:76,887,399...76,911,131
JBrowse link
G SETX senataxin IEA Ensembl GO_REF:0000107 NCBI chr 9:51,900,004...51,980,694
Ensembl chr 9:51,901,233...51,978,833
JBrowse link
G SFTPB surfactant protein B ISO RGD PMID:12872443 RGD:4143473 NCBI chr17:39,419,305...39,428,513
Ensembl chr17:39,386,584...39,426,229
JBrowse link
G SFTPC surfactant protein C ISO RGD PMID:12872443 RGD:4143473 NCBI chr25:35,088,295...35,090,995
Ensembl chr25:35,088,279...35,091,457
JBrowse link
G SIRT1 sirtuin 1 ISO (PMID:18662546) UniProtKB PMID:18662546 NCBI chr 4:19,188,616...19,220,031
Ensembl chr 4:19,188,675...19,218,279
JBrowse link
G SLC4A1 solute carrier family 4 member 1 ISO RGD PMID:21903759 RGD:10450532 NCBI chr 9:19,142,884...19,159,449
Ensembl chr 9:19,146,480...19,157,915
JBrowse link
G SLC6A4 solute carrier family 6 member 4 ISO RGD PMID:18482738 RGD:4889508 NCBI chr 9:44,224,026...44,259,655
Ensembl chr 9:44,224,229...44,259,736
JBrowse link
G SLC9A3 solute carrier family 9 member A3 ISO RGD PMID:15780093 RGD:1581376 NCBI chr34:11,748,556...11,785,209
Ensembl chr34:11,748,175...11,785,786
JBrowse link
G SREBF1 sterol regulatory element binding transcription factor 1 IEA Ensembl GO_REF:0000107 NCBI chr 5:41,663,809...41,686,764
Ensembl chr 5:41,663,773...41,686,776
JBrowse link
G STAR steroidogenic acute regulatory protein ISO RGD PMID:19190255 RGD:4145635 NCBI chr16:27,326,355...27,331,025
Ensembl chr16:27,326,355...27,331,025
JBrowse link
G SYNCRIP synaptotagmin binding cytoplasmic RNA interacting protein ISO RGD PMID:15798208 RGD:9854643 NCBI chr12:45,613,947...45,644,879
Ensembl chr12:45,618,234...45,644,778
JBrowse link
G THRAP3 thyroid hormone receptor associated protein 3 IEA Ensembl GO_REF:0000107 NCBI chr15:5,955,469...6,022,442
Ensembl chr15:5,956,316...6,021,875
JBrowse link
G TIMELESS timeless circadian regulator IEA Ensembl GO_REF:0000107 NCBI chr10:671,829...701,152
Ensembl chr10:671,269...687,016
JBrowse link
G TNF tumor necrosis factor ISO RGD PMID:9483199 RGD:11552588 NCBI chr12:1,074,561...1,076,425
Ensembl chr12:1,074,552...1,076,425
JBrowse link
G TOP1 DNA topoisomerase I ISO (PMID:22904072) UniProtKB PMID:22904072 NCBI chr24:29,075,267...29,166,733
Ensembl chr24:29,075,492...29,165,864
JBrowse link
G TP53 tumor protein p53 ISO (PMID:24051492) UniProtKB PMID:24051492 NCBI chr 5:32,561,406...32,565,149
Ensembl chr 5:32,560,598...32,574,109
JBrowse link
G TPH1 tryptophan hydroxylase 1 ISO RGD PMID:18705647 RGD:5686363 NCBI chr21:40,545,379...40,571,620
Ensembl chr21:40,547,682...40,566,572
JBrowse link
G TPH2 tryptophan hydroxylase 2 ISO RGD PMID:15194882 RGD:2317079 NCBI chr10:13,442,611...13,526,537
Ensembl chr10:13,442,611...13,527,243
JBrowse link
G TYMS thymidylate synthetase ISO RGD PMID:19628084 RGD:5133425 NCBI chr 7:67,487,927...67,497,747
Ensembl chr 7:67,487,927...67,497,747
JBrowse link
G ZC3H7B zinc finger CCCH-type containing 7B ISO (MGI:MGI:5559671|PMID:14645221) UniProtKB PMID:14645221 MGI:MGI:5559671 NCBI chr10:23,882,379...23,944,850
Ensembl chr10:23,884,981...23,920,131
JBrowse link
circadian sleep/wake cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AHCY adenosylhomocysteinase ISO RGD PMID:8330191 RGD:1598901 NCBI chr24:23,410,553...23,423,494
Ensembl chr24:23,411,140...23,419,767
JBrowse link
G NPAS2 neuronal PAS domain protein 2 ISO (MGI:MGI:2667759|PMID:12843397) MGI PMID:12843397 MGI:MGI:2667759 NCBI chr10:41,846,766...42,005,058
Ensembl chr10:41,847,625...42,005,469
JBrowse link
G TH tyrosine hydroxylase ISO RGD PMID:20980612 RGD:5128829 NCBI chr18:46,327,136...46,334,973
Ensembl chr18:46,327,137...46,335,602
JBrowse link
circadian sleep/wake cycle process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HCRTR2 hypocretin receptor 2 IEA InterPro GO_REF:0000002 NCBI chr12:22,517,482...22,623,358
Ensembl chr12:22,517,482...22,623,358
JBrowse link
circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BTBD9 BTB domain containing 9 IEA Ensembl GO_REF:0000107 NCBI chr12:7,154,805...7,564,050
Ensembl chr12:7,154,925...7,564,017
JBrowse link
G GHRH growth hormone releasing hormone ISO RGD PMID:17537840 RGD:2289986 NCBI chr24:25,893,224...25,902,095
Ensembl chr24:25,893,225...25,897,712
JBrowse link
circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GABRB3 gamma-aminobutyric acid type A receptor subunit beta3 ISO (MGI:MGI:2445919|PMID:12419540) MGI PMID:12419540 MGI:MGI:2445919 NCBI chr 3:33,878,948...34,101,987
Ensembl chr 3:33,878,904...34,097,764
JBrowse link
G LOC607874 cystatin-C-like ISO RGD PMID:17027151 RGD:2306498 NCBI chr23:49,562...53,618 JBrowse link
G PRKACA protein kinase cAMP-activated catalytic subunit alpha ISO RGD PMID:20844122 RGD:13515123 NCBI chr20:48,416,730...48,425,237
Ensembl chr20:48,409,045...48,426,669
JBrowse link
G SRD5A1 steroid 5 alpha-reductase 1 ISO deprivation RGD PMID:12597996 RGD:4891963 NCBI chr34:7,118,814...7,144,828
Ensembl chr34:7,118,814...7,144,828
JBrowse link
G STAR steroidogenic acute regulatory protein ISO deprivation RGD PMID:12597996 RGD:4891963 NCBI chr16:27,326,355...27,331,025
Ensembl chr16:27,326,355...27,331,025
JBrowse link
circadian temperature homeostasis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EGR1 early growth response 1 IEA Ensembl GO_REF:0000107 NCBI chr11:26,046,195...26,049,806
Ensembl chr11:26,046,228...26,048,575
JBrowse link
G NR1D1 nuclear receptor subfamily 1 group D member 1 IEA Ensembl GO_REF:0000107 NCBI chr 9:22,461,556...22,469,243
Ensembl chr 9:22,461,705...22,469,053
JBrowse link
G TNFRSF11A TNF receptor superfamily member 11a IEA Ensembl GO_REF:0000107 NCBI chr 1:14,504,595...14,555,956
Ensembl chr 1:14,503,033...14,556,041
JBrowse link
entrainment of circadian clock term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATOH7 atonal bHLH transcription factor 7 ISO (MGI:MGI:2445865|PMID:12451142) MGI PMID:12451142 MGI:MGI:2445865 NCBI chr 4:19,466,476...19,479,279
Ensembl chr 4:19,478,694...19,479,152
JBrowse link
G CHRM1 cholinergic receptor muscarinic 1 ISS AgBase GO_REF:0000024 NCBI chr18:53,783,938...53,797,750
Ensembl chr18:53,795,326...53,796,708
JBrowse link
G CLOCK clock circadian regulator ISO RGD PMID:10095082 RGD:632379 NCBI chr13:47,684,409...47,825,733
Ensembl chr13:47,691,709...47,758,784
JBrowse link
G GNAQ G protein subunit alpha q ISS AgBase GO_REF:0000024 NCBI chr 1:80,733,530...80,928,065
Ensembl chr 1:80,715,366...80,928,065
JBrowse link
G ID2 inhibitor of DNA binding 2 ISO (MGI:MGI:3838062|PMID:19217292) MGI PMID:19217292 MGI:MGI:3838062 NCBI chr10:54,954,852...54,957,116 JBrowse link
G PHLPP1 PH domain and leucine rich repeat protein phosphatase 1 IEA Ensembl GO_REF:0000107 NCBI chr 1:14,027,741...14,234,229
Ensembl chr 1:14,028,652...14,234,229
JBrowse link
G SOX14 SRY-box transcription factor 14 IEA Ensembl GO_REF:0000107 NCBI chr23:34,079,534...34,081,598
Ensembl chr23:34,080,037...34,080,759
JBrowse link
entrainment of circadian clock by photoperiod term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATOH7 atonal bHLH transcription factor 7 ISO (MGI:MGI:5699646|PMID:26392540) UniProt PMID:26392540 MGI:MGI:5699646 NCBI chr 4:19,466,476...19,479,279
Ensembl chr 4:19,478,694...19,479,152
JBrowse link
G BHLHE40 basic helix-loop-helix family member e40 IEA Ensembl GO_REF:0000107 NCBI chr20:12,641,872...12,647,519
Ensembl chr20:12,642,702...12,647,525
JBrowse link
G CRTC1 CREB regulated transcription coactivator 1 IEA Ensembl GO_REF:0000107 NCBI chr20:44,315,021...44,394,385
Ensembl chr20:44,319,858...44,394,599
JBrowse link
G CRY1 cryptochrome circadian regulator 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:31,681,098...31,792,995
Ensembl chr10:31,681,288...31,780,306
JBrowse link
G CRY2 cryptochrome circadian regulator 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr18:43,538,335...43,573,651
Ensembl chr18:43,539,612...43,573,875
JBrowse link
G FBXL12 F-box and leucine rich repeat protein 12 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr20:51,183,064...51,187,605
Ensembl chr20:51,183,285...51,187,738
JBrowse link
G FBXL17 F-box and leucine rich repeat protein 17 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:3,602,105...4,086,182
Ensembl chr 3:3,618,236...4,083,554
JBrowse link
G FBXL21P F-box and leucine rich repeat protein 21, pseudogene ISO (MGI:MGI:5470183|PMID:23452855), (MGI:MGI:5487698|PMID:23452856) UniProtKB PMID:23452855, PMID:23452856 MGI:MGI:5470183, MGI:MGI:5487698 NCBI chr11:23,846,512...23,859,141 JBrowse link
G FBXL22 F-box and leucine rich repeat protein 22 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr30:28,187,452...28,191,019 JBrowse link
G FBXL3 F-box and leucine rich repeat protein 3 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr22:30,579,598...30,598,879
Ensembl chr22:30,581,474...30,598,886
JBrowse link
G FBXL6 F-box and leucine rich repeat protein 6 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:37,780,991...37,783,976
Ensembl chr13:37,780,974...37,785,045
JBrowse link
G FBXL8 F-box and leucine rich repeat protein 8 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:82,201,732...82,206,058 JBrowse link
G ID2 inhibitor of DNA binding 2 ISO (MGI:MGI:3838062|PMID:19217292) UniProtKB PMID:19217292 MGI:MGI:3838062 NCBI chr10:54,954,852...54,957,116 JBrowse link
G MTA1 metastasis associated 1 ISO (MGI:MGI:5582861|PMID:24089055) UniProtKB PMID:24089055 MGI:MGI:5582861 NCBI chr 8:72,752,894...72,772,236
Ensembl chr 8:72,753,178...72,772,762
JBrowse link
G NR2F6 nuclear receptor subfamily 2 group F member 6 IEA Ensembl GO_REF:0000107 NCBI chr20:45,490,113...45,500,606
Ensembl chr20:45,464,356...45,500,608
JBrowse link
G OPN4 opsin 4 ISO (MGI:MGI:5925970|PMID:26320947) MGI PMID:26320947 MGI:MGI:5925970 NCBI chr 4:34,350,058...34,365,410
Ensembl chr 4:34,355,128...34,365,215
JBrowse link
G OPN5 opsin 5 IEA Ensembl GO_REF:0000107 NCBI chr12:15,831,311...15,858,121
Ensembl chr12:15,831,311...15,877,721
JBrowse link
G PDE6B phosphodiesterase 6B ISS UniProt GO_REF:0000024 NCBI chr 3:91,746,571...91,775,372
Ensembl chr 3:91,746,571...91,775,372
JBrowse link
G PER1 period circadian regulator 1 IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr 5:32,957,517...32,972,368
Ensembl chr 5:32,957,127...32,968,465
JBrowse link
G PER2 period circadian regulator 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr25:48,716,499...48,761,617
Ensembl chr25:48,717,173...48,758,755
JBrowse link
G PER3 period circadian regulator 3 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:61,445,580...61,499,393
Ensembl chr 5:61,445,461...61,498,499
JBrowse link
G PML PML nuclear body scaffold IEA Ensembl GO_REF:0000107 NCBI chr30:37,232,337...37,278,434
Ensembl chr30:37,232,306...37,277,741
JBrowse link
G PPP1CA protein phosphatase 1 catalytic subunit alpha ISS
IEA
UniProtKB
Ensembl
GO_REF:0000024, GO_REF:0000107 NCBI chr18:50,062,352...50,065,166
Ensembl chr18:50,062,352...50,065,166
JBrowse link
G PPP1CB protein phosphatase 1 catalytic subunit beta IEA Ensembl GO_REF:0000107 NCBI chr17:22,680,691...22,699,999
Ensembl chr17:22,679,783...22,699,999
JBrowse link
G PPP1CC protein phosphatase 1 catalytic subunit gamma ISO (MGI:MGI:5086036|PMID:21712997) UniProt PMID:21712997 MGI:MGI:5086036 NCBI chr26:8,497,350...8,518,467
Ensembl chr26:8,495,067...8,518,675
JBrowse link
G RBM4B RNA binding motif protein 4B IEA Ensembl GO_REF:0000107 NCBI chr18:50,676,138...50,686,061
Ensembl chr18:50,676,162...50,685,573
JBrowse link
G SIK1 salt inducible kinase 1 ISO (MGI:MGI:5532783|PMID:23993098) UniProtKB PMID:23993098 MGI:MGI:5532783 NCBI chr31:37,455,130...37,466,829 JBrowse link
G TP53 tumor protein p53 ISS
IEA
UniProtKB
Ensembl
GO_REF:0000024, GO_REF:0000107 NCBI chr 5:32,561,406...32,565,149
Ensembl chr 5:32,560,598...32,574,109
JBrowse link
G USP2 ubiquitin specific peptidase 2 IEA Ensembl GO_REF:0000107 NCBI chr 5:14,525,685...14,550,914
Ensembl chr 5:14,525,797...14,549,291
JBrowse link
estrous cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADNP activity dependent neuroprotector homeobox ISO RGD PMID:16023261 RGD:2312777 NCBI chr24:37,211,776...37,245,938
Ensembl chr24:37,213,942...37,243,702
JBrowse link
G ADRB2 adrenoceptor beta 2 ISO RGD PMID:7977723 RGD:8548523 NCBI chr 4:60,048,502...60,050,447
Ensembl chr 4:59,941,517...60,050,298
JBrowse link
G ALDH1A1 aldehyde dehydrogenase 1 family member A1 ISO RGD PMID:18202528 RGD:2306318 NCBI chr 1:84,940,411...84,994,789
Ensembl chr 1:84,940,411...84,994,789
JBrowse link
G ANXA1 annexin A1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:84,744,159...84,763,011
Ensembl chr 1:84,744,163...84,763,011
JBrowse link
G AZIN1 antizyme inhibitor 1 ISO RGD PMID:28315656 RGD:14700804 NCBI chr13:4,363,996...4,396,069
Ensembl chr13:4,361,340...4,396,040
JBrowse link
G CCKBR cholecystokinin B receptor ISO RGD PMID:17045752 RGD:2311331 NCBI chr21:29,602,066...29,606,343
Ensembl chr21:29,604,150...29,605,725
JBrowse link
G CLU clusterin ISO RGD PMID:11149574 RGD:9068389 NCBI chr25:29,982,811...29,999,565
Ensembl chr25:29,982,811...29,999,563
JBrowse link
G CYP1B1 cytochrome P450 family 1 subfamily B member 1 ISO RGD PMID:12223220 RGD:7829740 NCBI chr17:30,273,281...30,278,554
Ensembl chr17:30,272,749...30,278,554
JBrowse link
G EGR1 early growth response 1 IEA Ensembl GO_REF:0000107 NCBI chr11:26,046,195...26,049,806
Ensembl chr11:26,046,228...26,048,575
JBrowse link
G ENPP2 ectonucleotide pyrophosphatase/phosphodiesterase 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:18,586,886...18,697,339
Ensembl chr13:18,587,129...18,697,324
JBrowse link
G ERBB2 erb-b2 receptor tyrosine kinase 2 ISO RGD PMID:11956173 RGD:2290010 NCBI chr 9:22,760,373...22,785,367
Ensembl chr 9:22,759,256...22,785,294
JBrowse link
G ESR2 estrogen receptor 2 ISO RGD PMID:11854469 RGD:8694160 NCBI chr 8:38,645,917...38,715,347
Ensembl chr 8:38,645,430...38,702,691
JBrowse link
G ETS1 ETS proto-oncogene 1, transcription factor ISO RGD PMID:18439600 RGD:2313729 NCBI chr 5:6,059,023...6,189,516
Ensembl chr 5:6,058,935...6,186,232
JBrowse link
G GNRH1 gonadotropin releasing hormone 1 ISO RGD PMID:9075691 RGD:9685070 NCBI chr25:32,038,631...32,043,192
Ensembl chr25:32,039,613...32,043,028
JBrowse link
G HAS1 hyaluronan synthase 1 ISO RGD PMID:24218629 RGD:9588635 NCBI chr 1:105,376,091...105,386,043
Ensembl chr 1:105,376,536...105,385,134
JBrowse link
G HAS2 hyaluronan synthase 2 ISO RGD PMID:24218629 RGD:9588635 NCBI chr13:20,310,946...20,342,647
Ensembl chr13:20,309,872...20,341,636
JBrowse link
G HSPA8 heat shock protein family A (Hsp70) member 8 ISO RGD PMID:9990085 RGD:10059328 NCBI chr 5:11,292,219...11,296,851
Ensembl chr 5:11,292,262...11,296,797
JBrowse link
G IGF1R insulin like growth factor 1 receptor ISO RGD PMID:17567960 RGD:10046043 NCBI chr 3:41,795,337...42,096,255
Ensembl chr 3:41,794,623...42,090,387
JBrowse link
G LOC100855763 transient receptor potential cation channel subfamily M member 2 ISO RGD PMID:24577155 RGD:9999435 NCBI chr31:38,220,507...38,250,683 JBrowse link
G MDK midkine ISO (MGI:MGI:3718185|PMID:17121547) UniProt PMID:17121547 MGI:MGI:3718185 NCBI chr 9:55,100,491...55,101,081 JBrowse link
G MMP13 matrix metallopeptidase 13 ISO RGD PMID:8691099 RGD:10043158 NCBI chr 5:28,793,568...28,864,832
Ensembl chr 5:28,850,522...28,864,121
JBrowse link
G MMP7 matrix metallopeptidase 7 ISO RGD PMID:10070364 RGD:9685349 NCBI chr 5:29,187,902...29,196,157
Ensembl chr 5:29,187,851...29,196,153
JBrowse link
G MUC4 mucin 4, cell surface associated ISO RGD PMID:9618151 RGD:2303752 NCBI chr33:29,061,372...29,084,938
Ensembl chr33:29,063,096...29,111,802
JBrowse link
G NCOA1 nuclear receptor coactivator 1 ISO RGD PMID:15862975 RGD:2306462 NCBI chr17:18,880,676...19,124,300
Ensembl chr17:18,880,383...19,122,258
JBrowse link
G NCOR2 nuclear receptor corepressor 2 ISO RGD PMID:15862975 RGD:2306462 NCBI chr26:5,352,670...5,493,741
Ensembl chr26:5,331,459...5,493,830
JBrowse link
G OPRK1 opioid receptor kappa 1 ISO RGD PMID:21041644 RGD:9831449 NCBI chr29:5,022,270...5,054,223
Ensembl chr29:5,025,786...5,051,919
JBrowse link
G OPRL1 opioid related nociceptin receptor 1 ISO RGD PMID:12710984 RGD:9835032 NCBI chr24:47,530,039...47,537,477
Ensembl chr24:47,508,136...47,537,250
JBrowse link
G OPRM1 opioid receptor mu 1 ISO RGD PMID:21041644 RGD:9831449 NCBI chr 1:43,972,915...44,037,477
Ensembl chr 1:43,972,219...44,141,238
JBrowse link
G OXTR oxytocin receptor ISO RGD PMID:12867731 RGD:2304182 NCBI chr20:9,358,797...9,382,308
Ensembl chr20:9,358,916...9,378,343
JBrowse link
G PCNA proliferating cell nuclear antigen ISO RGD PMID:10856886 RGD:10448987 NCBI chr24:16,478,774...16,485,992
Ensembl chr24:16,478,769...16,484,992
JBrowse link
G PGR progesterone receptor ISO RGD PMID:16461543 RGD:7248717 NCBI chr21:447,197...552,511
Ensembl chr21:447,319...552,511
JBrowse link
G PTN pleiotrophin IEA Ensembl GO_REF:0000107 NCBI chr16:11,283,078...11,382,820
Ensembl chr16:11,283,077...11,382,814
JBrowse link
G WNT5A Wnt family member 5A ISO RGD PMID:20126574 RGD:2326233 NCBI chr20:34,756,430...34,790,937
Ensembl chr20:34,769,930...34,786,673
JBrowse link
follicle-stimulating hormone signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADRM1 adhesion regulating molecule 1 ISO (MGI:MGI:4849324|PMID:21048919) BHF-UCL PMID:21048919 MGI:MGI:4849324 NCBI chr24:46,309,478...46,314,892
Ensembl chr24:46,275,175...46,491,347
JBrowse link
G ARRB1 arrestin beta 1 ISO RGD PMID:16899567 RGD:4140424 NCBI chr21:23,261,020...23,304,448
Ensembl chr21:23,235,711...23,297,786
JBrowse link
G ARRB2 arrestin beta 2 ISO RGD PMID:16899567 RGD:4140424 NCBI chr 5:31,831,208...31,838,875
Ensembl chr 5:31,829,864...31,839,454
JBrowse link
G CENPI centromere protein I ISO RGD PMID:7758824 RGD:728588 NCBI chr  X:75,035,147...75,112,991
Ensembl chr  X:75,035,141...75,211,971
JBrowse link
G FSHB follicle stimulating hormone subunit beta IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr21:50,279,320...50,282,843
Ensembl chr21:50,280,208...50,282,680
JBrowse link
G FSHR follicle stimulating hormone receptor IEA
IBA
(PMID:21873635) GOC
Ensembl
GO_Central
PMID:21873635 GO_REF:0000107, GO_REF:0000108 NCBI chr10:50,765,591...50,938,643
Ensembl chr10:50,770,995...50,938,474
JBrowse link
G GRK2 G protein-coupled receptor kinase 2 ISO RGD PMID:16899567 RGD:4140424 NCBI chr18:50,148,566...50,167,422
Ensembl chr18:50,148,598...50,167,428
JBrowse link
G MYH9 myosin heavy chain 9 ISO RGD PMID:20068007 RGD:6902910 NCBI chr10:28,063,626...28,122,953
Ensembl chr10:28,063,624...28,122,953
JBrowse link
generation of ovulation cycle rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHRNA7 cholinergic receptor nicotinic alpha 7 subunit IEA Ensembl GO_REF:0000107 NCBI chr 3:36,852,082...37,164,930
Ensembl chr 3:36,852,543...36,978,399
JBrowse link
G KISS1 KiSS-1 metastasis suppressor ISO RGD PMID:15976058 RGD:2292152 NCBI chr38:768,333...774,328
Ensembl chr38:768,585...773,382
JBrowse link
G NPY5R neuropeptide Y receptor Y5 ISO RGD PMID:12047724 RGD:1625504 NCBI chr15:59,600,212...59,608,576
Ensembl chr15:59,606,902...59,608,273
JBrowse link
initiation of primordial ovarian follicle growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXO3 forkhead box O3 IEA Ensembl GO_REF:0000107 NCBI chr12:65,552,455...65,673,467
Ensembl chr12:65,552,310...65,670,198
JBrowse link
G GAS2 growth arrest specific 2 IEA Ensembl GO_REF:0000107 NCBI chr21:44,277,996...44,406,210
Ensembl chr21:44,286,531...44,405,060
JBrowse link
locomotor rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANKFN1 ankyrin repeat and fibronectin type III domain containing 1 ISO (MGI:MGI:5642309|PMID:26131556) MGI PMID:26131556 MGI:MGI:5642309 NCBI chr 9:31,093,638...31,364,315
Ensembl chr 9:31,055,348...31,386,790
JBrowse link
G CIART circadian associated repressor of transcription IEA Ensembl GO_REF:0000107 NCBI chr17:59,524,715...59,529,535
Ensembl chr17:59,525,987...59,529,402
JBrowse link
G EGR1 early growth response 1 IEA Ensembl GO_REF:0000107 NCBI chr11:26,046,195...26,049,806
Ensembl chr11:26,046,228...26,048,575
JBrowse link
G ID2 inhibitor of DNA binding 2 ISO (MGI:MGI:3838062|PMID:19217292) UniProtKB PMID:19217292 MGI:MGI:3838062 NCBI chr10:54,954,852...54,957,116 JBrowse link
G KCNMA1 potassium calcium-activated channel subfamily M alpha 1 ISA (PMID:8973172) AgBase PMID:8973172 NCBI chr 4:26,844,250...27,338,271
Ensembl chr 4:26,844,250...27,555,776
JBrowse link
G LOC607881 potassium voltage-gated channel subfamily D member 2-like ISO (MGI:MGI:5432624|PMID:22815518) UniProtKB PMID:22815518 MGI:MGI:5432624
G MAPK10 mitogen-activated protein kinase 10 ISO (MGI:MGI:5431019|PMID:22441692) UniProt PMID:22441692 MGI:MGI:5431019 NCBI chr32:9,584,437...9,889,118
Ensembl chr32:9,575,492...9,884,325
JBrowse link
G MC3R melanocortin 3 receptor IEA Ensembl GO_REF:0000107 NCBI chr24:41,492,371...41,494,033
Ensembl chr24:41,492,371...41,494,033
JBrowse link
G MTA1 metastasis associated 1 ISO (MGI:MGI:5582861|PMID:24089055) UniProtKB PMID:24089055 MGI:MGI:5582861 NCBI chr 8:72,752,894...72,772,236
Ensembl chr 8:72,753,178...72,772,762
JBrowse link
G NAGLU N-acetyl-alpha-glucosaminidase IEA Ensembl GO_REF:0000107 NCBI chr 9:20,407,296...20,414,094
Ensembl chr 9:20,407,281...20,414,056
JBrowse link
G NCOA2 nuclear receptor coactivator 2 IEA Ensembl GO_REF:0000107 NCBI chr29:19,253,849...19,471,640
Ensembl chr29:19,222,842...19,545,371
JBrowse link
G NCOR1 nuclear receptor corepressor 1 ISO (MGI:MGI:3821398|PMID:19037247) UniProt PMID:19037247 MGI:MGI:3821398 NCBI chr 5:39,687,530...39,837,003
Ensembl chr 5:39,687,543...39,836,464
JBrowse link
G NMS neuromedin S ISO PMID:15635449 MGI PMID:15635449 RGD:1359746 NCBI chr10:42,260,542...42,310,397
Ensembl chr10:42,260,540...42,274,613
JBrowse link
G NPAS2 neuronal PAS domain protein 2 ISO (MGI:MGI:2667759|PMID:12843397) MGI PMID:12843397 MGI:MGI:2667759 NCBI chr10:41,846,766...42,005,058
Ensembl chr10:41,847,625...42,005,469
JBrowse link
G PTEN phosphatase and tensin homolog IEA Ensembl GO_REF:0000107 NCBI chr26:37,853,148...37,913,176
Ensembl chr26:37,835,661...37,913,176
JBrowse link
G USP2 ubiquitin specific peptidase 2 IEA Ensembl GO_REF:0000107 NCBI chr 5:14,525,685...14,550,914
Ensembl chr 5:14,525,797...14,549,291
JBrowse link
luteinization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAPN5 calpain 5 ISO RGD PMID:19415717 RGD:2313170 NCBI chr21:21,626,090...21,678,545
Ensembl chr21:21,627,791...21,678,880
JBrowse link
G CYP19A1 cytochrome P450 family 19 subfamily A member 1 ISO RGD PMID:23183184 RGD:7257725 NCBI chr30:16,954,020...17,056,728
Ensembl chr30:16,957,215...16,988,353
JBrowse link
G FZD4 frizzled class receptor 4 ISO (MGI:MGI:3692134|PMID:16093361) MGI PMID:16093361 MGI:MGI:3692134 NCBI chr21:12,699,886...12,709,132
Ensembl chr21:12,699,774...12,724,923
JBrowse link
G LOC477699 alpha-2-macroglobulin ISO RGD PMID:2479532 RGD:10046034 NCBI chr27:36,654,328...36,695,775 JBrowse link
G MMP1 matrix metallopeptidase 1 ISO RGD PMID:8835383 RGD:7207087 NCBI chr 5:28,978,385...28,986,644
Ensembl chr 5:28,978,473...28,986,648
JBrowse link
G MMP2 matrix metallopeptidase 2 ISO RGD PMID:10537164 RGD:7207086 NCBI chr 2:60,471,092...60,492,991
Ensembl chr 2:60,471,257...60,494,113
JBrowse link
G NR6A1 nuclear receptor subfamily 6 group A member 1 IEA Ensembl GO_REF:0000107 NCBI chr 9:58,385,981...58,485,003
Ensembl chr 9:58,266,726...58,446,000
Ensembl chr 9:58,266,726...58,446,000
JBrowse link
G PDGFRA platelet derived growth factor receptor alpha IEA Ensembl GO_REF:0000107 NCBI chr13:46,729,722...46,775,828
Ensembl chr13:46,730,703...46,773,278
JBrowse link
G PGR progesterone receptor ISO RGD PMID:8344215 RGD:1601291 NCBI chr21:447,197...552,511
Ensembl chr21:447,319...552,511
JBrowse link
G PLEKHA1 pleckstrin homology domain containing A1 IEA Ensembl GO_REF:0000107 NCBI chr28:32,025,791...32,081,824
Ensembl chr28:32,026,350...32,081,835
JBrowse link
G PTPRN protein tyrosine phosphatase receptor type N ISO (MGI:MGI:3769282|PMID:16269463) UniProtKB PMID:16269463 MGI:MGI:3769282 NCBI chr37:25,835,590...25,854,050
Ensembl chr37:25,836,118...25,869,931
JBrowse link
G SGPL1 sphingosine-1-phosphate lyase 1 IEA Ensembl GO_REF:0000107 NCBI chr 4:21,666,264...21,717,476
Ensembl chr 4:21,660,939...21,715,155
JBrowse link
G STAT5A signal transducer and activator of transcription 5A ISO (MGI:MGI:2181561|PMID:9630227) MGI PMID:9630227 MGI:MGI:2181561 NCBI chr 9:20,616,041...20,638,523
Ensembl chr 9:20,617,151...20,638,103
JBrowse link
G STAT5B signal transducer and activator of transcription 5B IEA Ensembl GO_REF:0000107 NCBI chr 9:20,647,712...20,718,453
Ensembl chr 9:20,691,483...20,716,485
JBrowse link
luteolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CASP12 caspase 12 ISO RGD PMID:25332219 RGD:13782179 NCBI chr 5:27,162,840...27,176,964
Ensembl chr 5:27,161,700...27,177,683
JBrowse link
G CASP2 caspase 2 ISO RGD PMID:16940287 RGD:4107077 NCBI chr16:6,378,447...6,396,251
Ensembl chr16:6,379,913...6,396,646
JBrowse link
G CASP3 caspase 3 ISO RGD PMID:25332219 RGD:13782179 NCBI chr16:45,920,074...45,940,507
Ensembl chr16:45,920,071...45,940,505
JBrowse link
G DDIT3 DNA damage inducible transcript 3 ISO RGD PMID:25332219 RGD:13782179 NCBI chr10:1,606,693...1,612,410
Ensembl chr10:1,606,693...1,611,303
JBrowse link
G HSPA5 heat shock protein family A (Hsp70) member 5 ISO RGD PMID:25332219 RGD:13782179 NCBI chr 9:57,850,870...57,855,607
Ensembl chr 9:57,850,922...57,855,257
JBrowse link
G MMP1 matrix metallopeptidase 1 ISO RGD PMID:8835383 RGD:7207087 NCBI chr 5:28,978,385...28,986,644
Ensembl chr 5:28,978,473...28,986,648
JBrowse link
G MMP13 matrix metallopeptidase 13 ISO RGD PMID:10537164 RGD:7207086 NCBI chr 5:28,793,568...28,864,832
Ensembl chr 5:28,850,522...28,864,121
JBrowse link
G MMP19 matrix metallopeptidase 19 ISO RGD PMID:15286033 RGD:1642024 NCBI chr10:219,193...224,873
Ensembl chr10:219,618...224,778
JBrowse link
G PLA2G4A phospholipase A2 group IVA ISO RGD PMID:11444430 RGD:1642472 NCBI chr 7:19,804,412...19,955,215
Ensembl chr 7:19,832,664...19,966,936
JBrowse link
negative regulation of circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CIPC CLOCK interacting pacemaker IEA InterPro GO_REF:0000002 NCBI chr 8:49,926,494...49,947,006
Ensembl chr 8:49,926,978...49,945,326
JBrowse link
G CRY1 cryptochrome circadian regulator 1 IEA Ensembl GO_REF:0000107 NCBI chr10:31,681,098...31,792,995
Ensembl chr10:31,681,288...31,780,306
JBrowse link
G CRY2 cryptochrome circadian regulator 2 IEA Ensembl GO_REF:0000107 NCBI chr18:43,538,335...43,573,651
Ensembl chr18:43,539,612...43,573,875
JBrowse link
G PASD1 PAS domain containing repressor 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:119,536,333...119,629,452
Ensembl chr  X:119,536,268...119,629,451
JBrowse link
G PER2 period circadian regulator 2 ISO (MGI:MGI:4410413|PMID:19605937) UniProtKB PMID:19605937 MGI:MGI:4410413 NCBI chr25:48,716,499...48,761,617
Ensembl chr25:48,717,173...48,758,755
JBrowse link
G PIWIL2 piwi like RNA-mediated gene silencing 2 IEA Ensembl GO_REF:0000107 NCBI chr25:34,911,120...34,987,287
Ensembl chr25:34,912,358...34,987,339
JBrowse link
G SFPQ splicing factor proline and glutamine rich IEA Ensembl GO_REF:0000107 NCBI chr15:6,879,955...6,896,309
Ensembl chr15:6,880,065...6,888,004
JBrowse link
G SIN3A SIN3 transcription regulator family member A IEA Ensembl GO_REF:0000107 NCBI chr30:38,231,844...38,306,665
Ensembl chr30:38,232,680...38,382,635
JBrowse link
G SUV39H1 suppressor of variegation 3-9 homolog 1 ISO (MGI:MGI:5569417|PMID:24413057) UniProtKB PMID:24413057 MGI:MGI:5569417 NCBI chr  X:41,894,623...41,907,854
Ensembl chr  X:41,893,045...41,906,403
JBrowse link
G SUV39H2 suppressor of variegation 3-9 homolog 2 ISO (MGI:MGI:5569417|PMID:24413057) UniProtKB PMID:24413057 MGI:MGI:5569417 NCBI chr 2:21,715,677...21,749,732
Ensembl chr 2:21,728,964...21,749,597
JBrowse link
negative regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase ISO RGD PMID:19066225 RGD:5128864 NCBI chr24:32,083,786...32,119,810
Ensembl chr24:32,083,931...32,111,160
JBrowse link
G ADORA1 adenosine A1 receptor ISO RGD PMID:19491711 RGD:2317916 NCBI chr 7:44,819...74,217
Ensembl chr 7:44,820...73,051
JBrowse link
negative regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GHRL ghrelin and obestatin prepropeptide IEA Ensembl GO_REF:0000107 NCBI chr20:8,092,921...8,097,512
Ensembl chr20:8,092,957...8,097,510
JBrowse link
G HTR7 5-hydroxytryptamine receptor 7 ISO RGD PMID:18466985 RGD:6480669 NCBI chr28:5,438,872...5,524,385
Ensembl chr28:5,440,388...5,524,191
JBrowse link
G PTGER4 prostaglandin E receptor 4 ISO RGD PMID:10923657 RGD:10043386 NCBI chr 4:68,663,362...68,676,241
Ensembl chr 4:68,663,364...68,676,358
JBrowse link
negative regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADORA1 adenosine A1 receptor ISO in the sleep-promoting area of the lateral preoptic area of the brain RGD PMID:16109808 RGD:1625234 NCBI chr 7:44,819...74,217
Ensembl chr 7:44,820...73,051
JBrowse link
G DRD1 dopamine receptor D1 ISO RGD PMID:12944496 RGD:1581422 NCBI chr 4:37,550,454...37,554,641
Ensembl chr 4:37,549,708...37,553,287
JBrowse link
G DRD2 dopamine receptor D2 ISO RGD PMID:12944496 RGD:1581422 NCBI chr 5:19,732,842...19,795,241
Ensembl chr 5:19,732,836...19,795,241
JBrowse link
negative regulation of circadian sleep/wake cycle, wakefulness term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PTGER3 prostaglandin E receptor 3 ISO RGD PMID:10923657 RGD:10043386 NCBI chr 6:74,932,789...74,986,573 JBrowse link
negative regulation of locomotor rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LEPR leptin receptor ISO RGD PMID:16982424 RGD:10412019 NCBI chr 5:44,684,118...44,775,626
Ensembl chr 5:44,688,109...44,775,636
JBrowse link
negative regulation of progesterone secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TP53 tumor protein p53 ISO (PMID:18703674) AgBase PMID:18703674 NCBI chr 5:32,561,406...32,565,149
Ensembl chr 5:32,560,598...32,574,109
JBrowse link
ovarian cumulus expansion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMPR1B bone morphogenetic protein receptor type 1B IEA Ensembl GO_REF:0000107 NCBI chr32:17,761,555...17,978,056
Ensembl chr32:17,870,904...18,016,444
JBrowse link
G EREG epiregulin ISO PMID:15459120 UniProt PMID:15459120 RGD:2316284 NCBI chr13:62,857,325...62,877,831
Ensembl chr13:62,856,709...62,877,760
JBrowse link
G GDF9 growth differentiation factor 9 ISO (PMID:24313324) AgBase PMID:24313324 NCBI chr11:21,143,982...21,148,945
Ensembl chr11:21,143,975...21,149,825
JBrowse link
G KIF20A kinesin family member 20A ISO (PMID:25036038) AgBase PMID:25036038 NCBI chr11:25,826,140...25,834,220
Ensembl chr11:25,825,747...25,833,985
JBrowse link
G PTX3 pentraxin 3 IEA Ensembl GO_REF:0000107 NCBI chr23:50,952,835...50,958,607
Ensembl chr23:50,952,885...50,958,167
JBrowse link
ovarian follicle rupture term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGT angiotensinogen ISO (MGI:MGI:1934990|PMID:11384650) MGI PMID:11384650 MGI:MGI:1934990 NCBI chr 4:8,681,192...8,694,059
Ensembl chr 4:8,683,798...8,693,880
JBrowse link
G EDN2 endothelin 2 ISO RGD PMID:16410304 RGD:1581792 NCBI chr15:1,647,966...1,654,272
Ensembl chr15:1,648,077...1,654,272
JBrowse link
G NRIP1 nuclear receptor interacting protein 1 IEA Ensembl GO_REF:0000107 NCBI chr31:11,852,330...11,951,735
Ensembl chr31:11,855,338...11,932,056
JBrowse link
ovulation cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADH4 alcohol dehydrogenase 4 (class II), pi polypeptide ISO RGD PMID:11095078 RGD:2316105 NCBI chr32:21,282,526...21,299,387
Ensembl chr32:21,282,890...21,299,328
JBrowse link
G AXL AXL receptor tyrosine kinase IEA Ensembl GO_REF:0000107 NCBI chr 1:112,699,679...112,727,434
Ensembl chr 1:112,700,365...112,726,960
JBrowse link
G BMP2 bone morphogenetic protein 2 ISO RGD PMID:15283681 RGD:2289021 NCBI chr24:15,199,667...15,211,509
Ensembl chr24:15,200,291...15,212,217
JBrowse link
G BMPR1B bone morphogenetic protein receptor type 1B ISO (MGI:MGI:2136692|PMID:11416163) UniProtKB PMID:11416163 MGI:MGI:2136692 NCBI chr32:17,761,555...17,978,056
Ensembl chr32:17,870,904...18,016,444
JBrowse link
G CHGA uncharacterized CHGA ISO RGD PMID:12873792 RGD:6907048 NCBI chr 8:1,970,966...1,973,511 JBrowse link
G CHRNA7 cholinergic receptor nicotinic alpha 7 subunit ISO (MGI:MGI:3052645|PMID:1400473) MGI PMID:1400473 MGI:MGI:3052645 NCBI chr 3:36,852,082...37,164,930
Ensembl chr 3:36,852,543...36,978,399
JBrowse link
G EGFR epidermal growth factor receptor ISO RGD PMID:11796513 RGD:70386 NCBI chr18:5,983,669...6,044,092
Ensembl chr18:5,982,770...6,042,631
JBrowse link
G FAS Fas cell surface death receptor ISO RGD PMID:16461545 RGD:1600349 NCBI chr26:38,738,811...38,763,298
Ensembl chr26:38,737,611...38,763,321
JBrowse link
G GABRB1 gamma-aminobutyric acid type A receptor subunit beta1 ISO RGD PMID:16226387 RGD:6480231 NCBI chr13:43,011,491...43,349,876
Ensembl chr13:42,992,569...43,349,923
JBrowse link
G GDF10 growth differentiation factor 10 ISO RGD PMID:12741959 RGD:2316371 NCBI chr 4:35,008,204...35,017,476
Ensembl chr 4:35,008,983...35,018,166
JBrowse link
G GNRH1 gonadotropin releasing hormone 1 ISO RGD PMID:16672174 RGD:1599845 NCBI chr25:32,038,631...32,043,192
Ensembl chr25:32,039,613...32,043,028
JBrowse link
G NHLH2 nescient helix-loop-helix 2 IEA Ensembl GO_REF:0000107 NCBI chr17:53,359,275...53,363,753
Ensembl chr17:53,359,258...53,458,795
JBrowse link
G PRL prolactin ISO RGD PMID:17499646 RGD:1642571 NCBI chr35:20,673,830...20,683,824
Ensembl chr35:20,673,839...20,683,824
JBrowse link
G SERPINF1 serpin family F member 1 ISO RGD PMID:23466670 RGD:8590225 NCBI chr 9:45,891,368...45,902,768
Ensembl chr 9:45,891,410...45,902,765
JBrowse link
G TIMP4 TIMP metallopeptidase inhibitor 4 ISO RGD PMID:12493716 RGD:1302332 NCBI chr20:6,399,522...6,405,089
Ensembl chr20:6,399,522...6,405,089
JBrowse link
G TYRO3 TYRO3 protein tyrosine kinase ISS
IEA
UniProt
Ensembl
GO_REF:0000024, GO_REF:0000107 NCBI chr30:8,571,230...8,602,655
Ensembl chr30:8,571,475...8,598,721
JBrowse link
ovulation cycle process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CMPK1 cytidine/uridine monophosphate kinase 1 ISO RGD PMID:16400681 RGD:5133250 NCBI chr15:13,324,235...13,357,387
Ensembl chr15:13,326,185...13,358,152
JBrowse link
G FSHR follicle stimulating hormone receptor ISO (MGI:MGI:1926755|PMID:11089565) MGI PMID:11089565 MGI:MGI:1926755 NCBI chr10:50,765,591...50,938,643
Ensembl chr10:50,770,995...50,938,474
JBrowse link
G GLRX glutaredoxin ISO RGD PMID:15956334 RGD:9686044 NCBI chr 3:13,795,609...13,804,732
Ensembl chr 3:13,795,817...13,803,895
JBrowse link
G LHCGR luteinizing hormone/choriogonadotropin receptor IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:50,540,706...50,594,336
Ensembl chr10:50,541,960...50,598,036
JBrowse link
G MAP2K6 mitogen-activated protein kinase kinase 6 ISO RGD PMID:11328854 RGD:7495835 NCBI chr 9:15,840,714...15,962,400
Ensembl chr 9:15,840,983...15,952,026
JBrowse link
G MSTN myostatin ISO RGD PMID:18845635 RGD:2303546 NCBI chr37:729,172...734,255
Ensembl chr37:729,172...734,362
JBrowse link
G PAM peptidylglycine alpha-amidating monooxygenase ISO RGD PMID:9618561 RGD:2302425 NCBI chr 3:8,141,508...8,312,081
Ensembl chr 3:8,142,061...8,290,477
JBrowse link
ovulation from ovarian follicle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAMTS1 ADAM metallopeptidase with thrombospondin type 1 motif 1 IEA Ensembl GO_REF:0000107 NCBI chr31:22,169,821...22,178,879
Ensembl chr31:22,170,381...22,178,945
JBrowse link
G AFM afamin IEA Ensembl GO_REF:0000107 NCBI chr13:62,212,230...62,235,136
Ensembl chr13:62,053,814...62,294,709
JBrowse link
G AFP alpha fetoprotein IEA Ensembl GO_REF:0000107 NCBI chr13:62,182,876...62,203,414
Ensembl chr13:62,053,814...62,294,709
JBrowse link
G ALB albumin IEA Ensembl GO_REF:0000107 NCBI chr13:62,133,747...62,169,349
Ensembl chr13:62,053,814...62,294,709
JBrowse link
G FOXO3 forkhead box O3 IEA Ensembl GO_REF:0000107 NCBI chr12:65,552,455...65,673,467
Ensembl chr12:65,552,310...65,670,198
JBrowse link
G LEP leptin ISO RGD PMID:17071778 RGD:1582677 NCBI chr14:8,115,396...8,130,946
Ensembl chr14:8,116,122...8,131,395
JBrowse link
G LEPR leptin receptor ISO RGD PMID:12959975 RGD:1582680 NCBI chr 5:44,684,118...44,775,626
Ensembl chr 5:44,688,109...44,775,636
JBrowse link
G LOC482194 alpha-fetoprotein-like IEA Ensembl GO_REF:0000107 NCBI chr13:62,244,712...62,294,282
Ensembl chr13:62,053,814...62,294,709
JBrowse link
G LOC610164 carbonyl reductase [NADPH] 1 ISO RGD PMID:10642578 RGD:1299856 NCBI chr31:31,316,573...31,321,413 JBrowse link
G MMP19 matrix metallopeptidase 19 ISO RGD PMID:15286033 RGD:1642024 NCBI chr10:219,193...224,873
Ensembl chr10:219,618...224,778
JBrowse link
G MMP2 matrix metallopeptidase 2 ISO RGD PMID:14668206 RGD:1582606 NCBI chr 2:60,471,092...60,492,991
Ensembl chr 2:60,471,257...60,494,113
JBrowse link
G NOS2 nitric oxide synthase 2 NOT ISO (MGI:MGI:2157249|PMID:11779605) MGI PMID:11779605 MGI:MGI:2157249 NCBI chr 9:42,171,821...42,210,217
Ensembl chr 9:42,171,821...42,208,588
JBrowse link
G NOS3 nitric oxide synthase 3 IEA Ensembl GO_REF:0000107 NCBI chr16:15,054,196...15,072,454
Ensembl chr16:15,011,344...15,072,277
JBrowse link
G PGR progesterone receptor IEA Ensembl GO_REF:0000107 NCBI chr21:447,197...552,511
Ensembl chr21:447,319...552,511
JBrowse link
G PLA2G4A phospholipase A2 group IVA ISO RGD PMID:10189070 RGD:1642477 NCBI chr 7:19,804,412...19,955,215
Ensembl chr 7:19,832,664...19,966,936
JBrowse link
G SIRT1 sirtuin 1 ISO (MGI:MGI:2447945|PMID:12482959) MGI PMID:12482959 MGI:MGI:2447945 NCBI chr 4:19,188,616...19,220,031
Ensembl chr 4:19,188,675...19,218,279
JBrowse link
positive regulation of antral ovarian follicle growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PTGER4 prostaglandin E receptor 4 ISO RGD PMID:15944932 RGD:10003098 NCBI chr 4:68,663,362...68,676,241
Ensembl chr 4:68,663,364...68,676,358
JBrowse link
G ZP3 zona pellucida glycoprotein 3 ISS
IEA
UniProtKB
Ensembl
GO_REF:0000024, GO_REF:0000107 NCBI chr 6:7,586,212...7,594,610
Ensembl chr 6:7,585,970...7,594,610
JBrowse link
positive regulation of circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARNTL aryl hydrocarbon receptor nuclear translocator like IEA Ensembl GO_REF:0000107 NCBI chr21:36,254,235...36,323,915
Ensembl chr21:36,290,070...36,323,622
JBrowse link
G ARNTL2 aryl hydrocarbon receptor nuclear translocator like 2 IEA Ensembl GO_REF:0000107 NCBI chr27:20,304,404...20,420,086
Ensembl chr27:20,306,705...20,420,736
JBrowse link
G BTRC beta-transducin repeat containing E3 ubiquitin protein ligase IEA Ensembl GO_REF:0000107 NCBI chr28:13,988,408...14,173,223
Ensembl chr28:13,988,432...14,169,581
JBrowse link
G FBXW11 F-box and WD repeat domain containing 11 IEA Ensembl GO_REF:0000107 NCBI chr 4:40,238,695...40,363,445
Ensembl chr 4:40,238,737...40,361,125
JBrowse link
G MTNR1B melatonin receptor 1B ISO RGD PMID:12643943 RGD:9588678 NCBI chr21:7,639,532...7,643,534
Ensembl chr21:7,640,317...7,641,498
JBrowse link
G NKX2-1 NK2 homeobox 1 IEA Ensembl GO_REF:0000107
G NR1D1 nuclear receptor subfamily 1 group D member 1 ISO RGD PMID:18946026 RGD:10448985 NCBI chr 9:22,461,556...22,469,243
Ensembl chr 9:22,461,705...22,469,053
JBrowse link
G PRKG1 protein kinase cGMP-dependent 1 ISO RGD PMID:12930792 RGD:7777105 NCBI chr26:35,732,974...36,932,744
Ensembl chr26:35,737,242...36,932,729
JBrowse link
G RORA RAR related orphan receptor A IEA Ensembl GO_REF:0000107 NCBI chr30:25,315,974...26,026,708
Ensembl chr30:25,325,275...26,026,623
JBrowse link
G RORC RAR related orphan receptor C ISO (MGI:MGI:5504349|PMID:22753030) UniProtKB PMID:22753030 MGI:MGI:5504349 NCBI chr17:60,821,498...60,842,485
Ensembl chr17:60,821,981...60,842,453
JBrowse link
G THRAP3 thyroid hormone receptor associated protein 3 IEA Ensembl GO_REF:0000107 NCBI chr15:5,955,469...6,022,442
Ensembl chr15:5,956,316...6,021,875
JBrowse link
G TIMELESS timeless circadian regulator ISO RGD PMID:14564007 RGD:734503 NCBI chr10:671,829...701,152
Ensembl chr10:671,269...687,016
JBrowse link
positive regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALB albumin ISO RGD PMID:9748091 RGD:1625449 NCBI chr13:62,133,747...62,169,349
Ensembl chr13:62,053,814...62,294,709
JBrowse link
G GHRH growth hormone releasing hormone ISO RGD PMID:19889861, PMID:20237285 RGD:10401262, RGD:2325188 NCBI chr24:25,893,224...25,902,095
Ensembl chr24:25,893,225...25,897,712
JBrowse link
G GHRHR growth hormone releasing hormone receptor ISO RGD PMID:20237285 RGD:10401262 NCBI chr14:43,626,862...43,638,737
Ensembl chr14:43,626,845...43,638,753
JBrowse link
G GHRL ghrelin and obestatin prepropeptide IEA Ensembl GO_REF:0000107 NCBI chr20:8,092,921...8,097,512
Ensembl chr20:8,092,957...8,097,510
JBrowse link
G MTNR1B melatonin receptor 1B ISO RGD PMID:19429170, PMID:22171046 RGD:9588660, RGD:9588665 NCBI chr21:7,639,532...7,643,534
Ensembl chr21:7,640,317...7,641,498
JBrowse link
G NPY2R neuropeptide Y receptor Y2 ISO RGD PMID:16378653 RGD:1642507 NCBI chr15:52,790,136...52,797,785
Ensembl chr15:52,794,671...52,795,818
JBrowse link
G PTGER3 prostaglandin E receptor 3 ISO RGD PMID:10923657 RGD:10043386 NCBI chr 6:74,932,789...74,986,573 JBrowse link
G PTGER4 prostaglandin E receptor 4 ISO RGD PMID:10923657 RGD:10043386 NCBI chr 4:68,663,362...68,676,241
Ensembl chr 4:68,663,364...68,676,358
JBrowse link
positive regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GHRH growth hormone releasing hormone NOT ISO (PMID:15538933) BHF-UCL PMID:15538933 NCBI chr24:25,893,224...25,902,095
Ensembl chr24:25,893,225...25,897,712
JBrowse link
G PMCH pro-melanin concentrating hormone ISO RGD PMID:12964948 RGD:1642489 NCBI chr15:41,036,428...41,037,571
Ensembl chr15:41,036,428...41,037,553
JBrowse link
G UTS2 urotensin 2 ISO RGD PMID:15944374 RGD:2306844 NCBI chr 5:61,503,268...61,508,146 JBrowse link
G UTS2R urotensin 2 receptor ISO RGD PMID:15944374 RGD:2306844
positive regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADORA2A adenosine A2a receptor ISO in the sleep-promoting area of the lateral preoptic area of the brain RGD PMID:16109808 RGD:1625234 NCBI chr26:28,141,076...28,150,600
Ensembl chr26:28,141,076...28,150,598
JBrowse link
G OPN4 opsin 4 ISO (MGI:MGI:5925970|PMID:26320947) MGI PMID:26320947 MGI:MGI:5925970 NCBI chr 4:34,350,058...34,365,410
Ensembl chr 4:34,355,128...34,365,215
JBrowse link
positive regulation of circadian sleep/wake cycle, wakefulness term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NLGN1 neuroligin 1 IEA Ensembl GO_REF:0000107 NCBI chr34:37,397,772...38,203,634
Ensembl chr34:37,572,629...38,203,177
JBrowse link
G NPS neuropeptide S ISO RGD PMID:22300983 RGD:9831203 NCBI chr28:36,488,430...36,492,524
Ensembl chr28:36,488,500...36,492,090
JBrowse link
G UTS2 urotensin 2 ISO RGD PMID:15944374 RGD:2306844 NCBI chr 5:61,503,268...61,508,146 JBrowse link
G UTS2R urotensin 2 receptor ISO RGD PMID:15944374 RGD:2306844
positive regulation of progesterone secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MFN2 mitofusin 2 ISO RGD PMID:25120590 RGD:13204819 NCBI chr 2:84,284,719...84,310,715
Ensembl chr 2:84,284,719...84,308,225
JBrowse link
G RETN resistin ISO RGD PMID:21239528 RGD:7207233 NCBI chr20:52,434,148...52,435,627
Ensembl chr20:52,434,271...52,435,624
JBrowse link
G RUNX1 RUNX family transcription factor 1 ISO RGD PMID:16675540 RGD:6482842 NCBI chr31:30,170,859...30,420,344
Ensembl chr31:30,170,605...30,420,839
JBrowse link
preantral ovarian follicle growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMH anti-Mullerian hormone ISO RGD PMID:11133686 RGD:2315649 NCBI chr20:56,785,960...56,788,815 JBrowse link
G GPR149 G protein-coupled receptor 149 IEA Ensembl GO_REF:0000107 NCBI chr23:48,470,428...48,535,861
Ensembl chr23:48,471,701...48,535,195
JBrowse link
G ZNF830 zinc finger protein 830 IEA Ensembl GO_REF:0000107 NCBI chr 9:38,382,508...38,384,060
Ensembl chr 9:38,382,900...38,384,015
JBrowse link
primary ovarian follicle growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FSHR follicle stimulating hormone receptor IEA Ensembl GO_REF:0000107 NCBI chr10:50,765,591...50,938,643
Ensembl chr10:50,770,995...50,938,474
JBrowse link
G SOHLH2 spermatogenesis and oogenesis specific basic helix-loop-helix 2 ISO (MGI:MGI:3836097|PMID:18753606) MGI PMID:18753606 MGI:MGI:3836097 NCBI chr25:4,345,785...4,419,352
Ensembl chr25:4,345,771...4,778,047
JBrowse link
G SRC SRC proto-oncogene, non-receptor tyrosine kinase ISO RGD PMID:22905678 RGD:13210788 NCBI chr24:25,982,499...26,019,748
Ensembl chr24:25,999,048...26,018,077
JBrowse link
progesterone secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FZD4 frizzled class receptor 4 IEA Ensembl GO_REF:0000107 NCBI chr21:12,699,886...12,709,132
Ensembl chr21:12,699,774...12,724,923
JBrowse link
G INHBA inhibin subunit beta A ISS UniProtKB GO_REF:0000024 NCBI chr18:8,272,978...8,288,432
Ensembl chr18:8,272,872...8,283,794
JBrowse link
regulation of circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADCY1 adenylate cyclase 1 IEA Ensembl GO_REF:0000107 NCBI chr16:1,064,644...1,166,864
Ensembl chr16:1,037,162...1,167,094
JBrowse link
G ATG7 autophagy related 7 ISO (MGI:MGI:6208175|PMID:29937374) UniProt PMID:29937374 MGI:MGI:6208175 NCBI chr20:6,916,354...7,154,849
Ensembl chr20:6,916,515...7,154,800
JBrowse link
G BHLHE40 basic helix-loop-helix family member e40 ISO (MGI:MGI:6282958|PMID:30012868) UniProt PMID:30012868 MGI:MGI:6282958 NCBI chr20:12,641,872...12,647,519
Ensembl chr20:12,642,702...12,647,525
JBrowse link
G BTRC beta-transducin repeat containing E3 ubiquitin protein ligase ISO (PMID:15917222) UniProtKB PMID:15917222 NCBI chr28:13,988,408...14,173,223
Ensembl chr28:13,988,432...14,169,581
JBrowse link
G CCAR2 cell cycle and apoptosis regulator 2 IEA Ensembl GO_REF:0000107 NCBI chr25:34,660,026...34,674,129
Ensembl chr25:34,660,553...34,674,037
JBrowse link
G CDK1 cyclin dependent kinase 1 IEA Ensembl GO_REF:0000107 NCBI chr 4:12,884,106...12,899,203
Ensembl chr 4:12,883,385...12,899,197
JBrowse link
G CLOCK clock circadian regulator IEA Ensembl GO_REF:0000107 NCBI chr13:47,684,409...47,825,733
Ensembl chr13:47,691,709...47,758,784
JBrowse link
G CREB1 cAMP responsive element binding protein 1 ISO RGD PMID:12409294 RGD:633667 NCBI chr37:15,921,214...15,978,492
Ensembl chr37:15,939,138...15,977,556
JBrowse link
G CREM cAMP responsive element modulator ISO RGD PMID:15936880 RGD:1582464 NCBI chr 2:1,755,189...1,828,746
Ensembl chr 2:1,755,522...1,828,910
JBrowse link
G CRY1 cryptochrome circadian regulator 1 ISO (MGI:MGI:1334825|PMID:10217146), (MGI:MGI:4366197|PMID:19833968), (MGI:MGI:4947326|PMID:21236481), (MGI:MGI:5490394|PMID:23616524), (MGI:MGI:5908518|PMID:26431207)
(MGI:MGI:5567898|PMID:23575670)
UniProt
UniProtKB
PMID:10217146, PMID:19833968, PMID:21236481, PMID:23575670, PMID:23616524, PMID:26431207 MGI:MGI:1334825, MGI:MGI:4366197, MGI:MGI:4947326, MGI:MGI:5490394, MGI:MGI:5567898, MGI:MGI:5908518 NCBI chr10:31,681,098...31,792,995
Ensembl chr10:31,681,288...31,780,306
JBrowse link
G CRY2 cryptochrome circadian regulator 2 ISO (MGI:MGI:1334825|PMID:10217146), (MGI:MGI:5490394|PMID:23616524)
(MGI:MGI:5567898|PMID:23575670)
UniProtKB PMID:10217146, PMID:23575670, PMID:23616524 MGI:MGI:1334825, MGI:MGI:5490394, MGI:MGI:5567898 NCBI chr18:43,538,335...43,573,651
Ensembl chr18:43,539,612...43,573,875
JBrowse link
G CSNK1D casein kinase 1 delta IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:83,395...110,309
Ensembl chr 9:73,215...110,269
JBrowse link
G CSNK1E casein kinase 1 epsilon IEA Ensembl GO_REF:0000107 NCBI chr10:26,386,646...26,412,429
Ensembl chr10:26,393,033...26,411,624
JBrowse link
G DDB1 damage specific DNA binding protein 1 IEA Ensembl GO_REF:0000107 NCBI chr18:55,064,720...55,097,623
Ensembl chr18:55,064,729...55,097,627
JBrowse link
G EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit IEA Ensembl GO_REF:0000107 NCBI chr16:1,926,443...1,991,995
Ensembl chr16:1,925,956...1,991,838
JBrowse link
G FBXL3 F-box and leucine rich repeat protein 3 ISO (MGI:MGI:3710694|PMID:17463252), (MGI:MGI:3715674|PMID:17462724), (MGI:MGI:5490394|PMID:23616524)
(PMID:17463251)
UniProtKB PMID:17462724, PMID:17463251, PMID:17463252, PMID:23616524 MGI:MGI:3710694, MGI:MGI:3715674, MGI:MGI:5490394 NCBI chr22:30,579,598...30,598,879
Ensembl chr22:30,581,474...30,598,886
JBrowse link
G FBXW7 F-box and WD repeat domain containing 7 IEA Ensembl GO_REF:0000107 NCBI chr15:50,187,579...50,417,188
Ensembl chr15:50,189,240...50,417,195
JBrowse link
G GSK3B glycogen synthase kinase 3 beta ISO (MGI:MGI:6294161|PMID:28556462) UniProt PMID:28556462 MGI:MGI:6294161 NCBI chr33:23,458,369...23,659,878
Ensembl chr33:23,463,767...23,659,666
JBrowse link
G HDAC3 histone deacetylase 3 ISO (MGI:MGI:5882311|PMID:26776516) UniProt PMID:26776516 MGI:MGI:5882311 NCBI chr 2:36,583,283...36,598,121
Ensembl chr 2:36,583,283...36,597,682
JBrowse link
G HNF4A hepatocyte nuclear factor 4 alpha IEA Ensembl GO_REF:0000107 NCBI chr24:31,847,864...31,908,337
Ensembl chr24:31,847,961...31,905,916
JBrowse link
G HNRNPD heterogeneous nuclear ribonucleoprotein D IEA Ensembl GO_REF:0000107 NCBI chr32:6,323,444...6,341,238
Ensembl chr32:6,323,469...6,341,166
JBrowse link
G ID2 inhibitor of DNA binding 2 ISO (MGI:MGI:3838062|PMID:19217292) UniProtKB PMID:19217292 MGI:MGI:3838062 NCBI chr10:54,954,852...54,957,116 JBrowse link
G KDM2A lysine demethylase 2A IEA Ensembl GO_REF:0000107 NCBI chr18:50,178,511...50,294,097
Ensembl chr18:50,181,024...50,291,127
JBrowse link
G KLF10 Kruppel like factor 10 ISO PMID:20070857 UniProt PMID:20070857 RGD:10047352 NCBI chr13:4,216,745...4,223,708
Ensembl chr13:4,218,084...4,223,691
JBrowse link
G LOC484316 protein kinase C gamma type IEA Ensembl GO_REF:0000107 NCBI chr 1:103,495,013...103,512,465 JBrowse link
G MAGED1 MAGE family member D1 ISO (MGI:MGI:5508569|PMID:20300063) UniProtKB PMID:20300063 MGI:MGI:5508569 NCBI chr  X:44,395,091...44,458,705
Ensembl chr  X:44,395,015...44,458,705
JBrowse link
G MAGEL2 MAGE family member L2 ISO (MGI:MGI:5607219|PMID:22208286) UniProtKB PMID:22208286 MGI:MGI:5607219 NCBI chr 3:36,362,021...36,366,326
Ensembl chr 3:36,363,930...36,365,870
JBrowse link
G MAPK10 mitogen-activated protein kinase 10 ISO (MGI:MGI:5431019|PMID:22441692) UniProt PMID:22441692 MGI:MGI:5431019 NCBI chr32:9,584,437...9,889,118
Ensembl chr32:9,575,492...9,884,325
JBrowse link
G MAPK8 mitogen-activated protein kinase 8 ISO (MGI:MGI:5431019|PMID:22441692) UniProtKB PMID:22441692 MGI:MGI:5431019 NCBI chr28:323,361...410,367
Ensembl chr28:368,513...406,401
JBrowse link
G MAPK9 mitogen-activated protein kinase 9 IEA Ensembl GO_REF:0000107 NCBI chr11:1,443,528...1,480,501
Ensembl chr11:1,443,547...1,478,119
JBrowse link
G MTOR mechanistic target of rapamycin kinase ISO (MGI:MGI:6159528|PMID:29750810) UniProt PMID:29750810 MGI:MGI:6159528 NCBI chr 2:84,818,893...84,939,283
Ensembl chr 2:84,787,708...84,939,114
JBrowse link
G NOCT nocturnin IEA Ensembl GO_REF:0000107 NCBI chr19:3,587,769...3,612,184
Ensembl chr19:3,588,695...3,609,307
JBrowse link
G NONO non-POU domain containing octamer binding IEA Ensembl GO_REF:0000107 NCBI chr  X:55,618,032...55,632,237
Ensembl chr  X:55,618,095...55,631,388
JBrowse link
G NPAS2 neuronal PAS domain protein 2 ISO (MGI:MGI:5518489|PMID:24048828) UniProtKB PMID:24048828 MGI:MGI:5518489 NCBI chr10:41,846,766...42,005,058
Ensembl chr10:41,847,625...42,005,469
JBrowse link
G NR1D1 nuclear receptor subfamily 1 group D member 1 ISO PMID:22425774
(MGI:MGI:4360821|PMID:19721697), (MGI:MGI:4429726|PMID:20159955), (MGI:MGI:6162161|PMID:29533925)
UniProt PMID:19721697, PMID:20159955, PMID:22425774, PMID:29533925 MGI:MGI:4360821, MGI:MGI:4429726, MGI:MGI:6162161, RGD:8553819 NCBI chr 9:22,461,556...22,469,243
Ensembl chr 9:22,461,705...22,469,053
JBrowse link
G NR1D2 nuclear receptor subfamily 1 group D member 2 IEA Ensembl GO_REF:0000107 NCBI chr23:19,758,907...19,787,725
Ensembl chr23:19,762,052...19,787,614
JBrowse link
G OPN4 opsin 4 IEA Ensembl GO_REF:0000107 NCBI chr 4:34,350,058...34,365,410
Ensembl chr 4:34,355,128...34,365,215
JBrowse link
G PER1 period circadian regulator 1 ISO (MGI:MGI:1935010|PMID:11395012) UniProtKB PMID:11395012 MGI:MGI:1935010 NCBI chr 5:32,957,517...32,972,368
Ensembl chr 5:32,957,127...32,968,465
JBrowse link
G PER2 period circadian regulator 2 ISO (MGI:MGI:1935010|PMID:11395012), (MGI:MGI:4410390|PMID:19917250) UniProtKB PMID:11395012, PMID:19917250 MGI:MGI:1935010, MGI:MGI:4410390 NCBI chr25:48,716,499...48,761,617
Ensembl chr25:48,717,173...48,758,755
JBrowse link
G PML PML nuclear body scaffold ISO (MGI:MGI:5314433|PMID:22274616) UniProtKB PMID:22274616 MGI:MGI:5314433 NCBI chr30:37,232,337...37,278,434
Ensembl chr30:37,232,306...37,277,741
JBrowse link
G PPARA peroxisome proliferator activated receptor alpha ISS
IEA
UniProtKB
Ensembl
GO_REF:0000024, GO_REF:0000107 NCBI chr10:19,934,020...20,006,096
Ensembl chr10:19,934,165...20,006,146
JBrowse link
G PPARG peroxisome proliferator activated receptor gamma ISS UniProtKB GO_REF:0000024 NCBI chr20:6,134,618...6,265,481
Ensembl chr20:6,050,357...6,207,981
JBrowse link
G PPARGC1A PPARG coactivator 1 alpha IEA Ensembl GO_REF:0000107 NCBI chr 3:85,645,942...86,284,570
Ensembl chr 3:86,016,140...86,281,269
JBrowse link
G PPP1CA protein phosphatase 1 catalytic subunit alpha ISS UniProtKB GO_REF:0000024 NCBI chr18:50,062,352...50,065,166
Ensembl chr18:50,062,352...50,065,166
JBrowse link
G PPP1CB protein phosphatase 1 catalytic subunit beta IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:22,680,691...22,699,999
Ensembl chr17:22,679,783...22,699,999
JBrowse link
G PPP1CC protein phosphatase 1 catalytic subunit gamma IEA Ensembl GO_REF:0000107 NCBI chr26:8,497,350...8,518,467
Ensembl chr26:8,495,067...8,518,675
JBrowse link
G PRKAA1 protein kinase AMP-activated catalytic subunit alpha 1 IEA Ensembl GO_REF:0000107 NCBI chr 4:68,579,061...68,614,548
Ensembl chr 4:68,579,037...68,611,841
JBrowse link
G PRKAA2 protein kinase AMP-activated catalytic subunit alpha 2 IEA Ensembl GO_REF:0000107 NCBI chr 5:52,809,792...52,855,072
Ensembl chr 5:52,815,609...52,876,609
JBrowse link
G PRKCG protein kinase C gamma IEA Ensembl GO_REF:0000107 NCBI chr 1:103,295,110...103,312,562 JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit ISS
IEA
UniProtKB
Ensembl
GO_REF:0000024, GO_REF:0000107 NCBI chr29:24,904...243,926
Ensembl chr29:35,007...243,895
JBrowse link
G PROX1 prospero homeobox 1 IEA Ensembl GO_REF:0000107 NCBI chr 7:11,996,282...12,047,693
Ensembl chr 7:11,996,703...12,044,036
JBrowse link
G PSPC1 paraspeckle component 1 IEA Ensembl GO_REF:0000107 NCBI chr25:18,287,827...18,361,801
Ensembl chr25:18,287,899...18,359,553
JBrowse link
G ROCK2 Rho associated coiled-coil containing protein kinase 2 ISO (PMID:23172836)
(MGI:MGI:5567901|PMID:23172836)
UniProt
UniProtKB
PMID:23172836 MGI:MGI:5567901 NCBI chr17:7,931,786...8,012,484
Ensembl chr17:7,934,739...8,178,707
JBrowse link
G RORA RAR related orphan receptor A ISO (MGI:MGI:5567901|PMID:23172836) UniProtKB PMID:23172836 MGI:MGI:5567901 NCBI chr30:25,315,974...26,026,708
Ensembl chr30:25,325,275...26,026,623
JBrowse link
G RORB RAR related orphan receptor B IEA Ensembl GO_REF:0000107 NCBI chr 1:83,470,569...83,666,200
Ensembl chr 1:83,476,816...83,666,061
JBrowse link
G SFPQ splicing factor proline and glutamine rich ISO (MGI:MGI:5444785|PMID:22966205) UniProtKB PMID:22966205 MGI:MGI:5444785 NCBI chr15:6,879,955...6,896,309
Ensembl chr15:6,880,065...6,888,004
JBrowse link
G SIAH2 siah E3 ubiquitin protein ligase 2 IEA Ensembl GO_REF:0000107 NCBI chr23:45,366,343...45,418,960
Ensembl chr23:45,341,199...45,385,546
JBrowse link
G SPSB4 splA/ryanodine receptor domain and SOCS box containing 4 IEA Ensembl GO_REF:0000107 NCBI chr23:36,998,124...37,082,576
Ensembl chr23:36,997,705...37,077,401
JBrowse link
G SRRD SRR1 domain containing ISO (MGI:MGI:6282940|PMID:28802827) UniProt PMID:28802827 MGI:MGI:6282940 NCBI chr26:20,172,236...20,186,236 JBrowse link
G TARDBP TAR DNA binding protein ISO (MGI:MGI:6253084|PMID:27123980) UniProt PMID:27123980 MGI:MGI:6253084 NCBI chr 2:84,987,752...84,998,136
Ensembl chr 2:84,989,952...84,998,593
JBrowse link
G TIMELESS timeless circadian regulator IEA Ensembl GO_REF:0000107 NCBI chr10:671,829...701,152
Ensembl chr10:671,269...687,016
JBrowse link
G TOP2A DNA topoisomerase II alpha IEA Ensembl GO_REF:0000107 NCBI chr 9:22,207,501...22,237,497
Ensembl chr 9:22,207,638...22,237,496
JBrowse link
G UBE3A ubiquitin protein ligase E3A IEA Ensembl GO_REF:0000107 NCBI chr 3:35,347,034...35,442,329
Ensembl chr 3:35,347,064...35,440,256
JBrowse link
G USP7 ubiquitin specific peptidase 7 IEA Ensembl GO_REF:0000107 NCBI chr 6:33,277,328...33,315,601
Ensembl chr 6:33,277,444...33,314,491
JBrowse link
G USP9X ubiquitin specific peptidase 9 X-linked ISO (PMID:29626158) UniProt PMID:29626158 NCBI chr  X:35,522,873...35,676,086 JBrowse link
regulation of circadian sleep/wake cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NR1D1 nuclear receptor subfamily 1 group D member 1 IEA Ensembl GO_REF:0000107 NCBI chr 9:22,461,556...22,469,243
Ensembl chr 9:22,461,705...22,469,053
JBrowse link
regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHRNB2 cholinergic receptor nicotinic beta 2 subunit IEA Ensembl GO_REF:0000107 NCBI chr 7:42,786,505...42,797,976
Ensembl chr 7:42,789,600...42,795,722
JBrowse link
G IL6 interleukin 6 ISO RGD PMID:12667648 RGD:1358315 NCBI chr14:36,474,268...36,478,519
Ensembl chr14:36,473,394...36,478,519
JBrowse link
G KCNA2 potassium voltage-gated channel subfamily A member 2 IEA Ensembl GO_REF:0000107 NCBI chr 6:41,405,453...41,415,727
Ensembl chr 6:41,407,070...41,408,823
JBrowse link
regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHRNB2 cholinergic receptor nicotinic beta 2 subunit IEA Ensembl GO_REF:0000107 NCBI chr 7:42,786,505...42,797,976
Ensembl chr 7:42,789,600...42,795,722
JBrowse link
regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase ISO RGD PMID:11038259 RGD:631747 NCBI chr24:32,083,786...32,119,810
Ensembl chr24:32,083,931...32,111,160
JBrowse link
G ADRB1 adrenoceptor beta 1 IEA
ISS
Ensembl
UniProt
GO_REF:0000024, GO_REF:0000107 NCBI chr28:24,908,224...24,909,684
Ensembl chr28:24,908,224...24,909,684
JBrowse link
G CSF2 colony stimulating factor 2 ISO RGD PMID:12047622 RGD:10449529 NCBI chr11:20,342,880...20,346,959
Ensembl chr11:20,344,648...20,346,959
JBrowse link
G DRD3 dopamine receptor D3 ISO RGD PMID:15913875 RGD:1625069 NCBI chr33:18,369,362...18,414,465
Ensembl chr33:18,372,865...18,412,277
JBrowse link
G NMU neuromedin U ISO PMID:20233222 UniProt PMID:20233222 RGD:12911001 NCBI chr13:47,865,037...48,047,697
Ensembl chr13:47,865,002...47,893,921
JBrowse link
G PER3 period circadian regulator 3 IEA Ensembl GO_REF:0000107 NCBI chr 5:61,445,580...61,499,393
Ensembl chr 5:61,445,461...61,498,499
JBrowse link
G PGLYRP1 peptidoglycan recognition protein 1 ISO RGD PMID:11145837 RGD:724610 NCBI chr 1:109,614,404...109,618,242
Ensembl chr 1:109,614,437...109,618,242
JBrowse link
G PTGDS prostaglandin D2 synthase ISS UniProtKB GO_REF:0000024 NCBI chr 9:48,647,334...48,650,608
Ensembl chr 9:48,646,255...48,669,814
JBrowse link
regulation of circadian sleep/wake cycle, wakefulness term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HCRTR2 hypocretin receptor 2 IMP (PMID:11282968) UniProtKB PMID:11282968 NCBI chr12:22,517,482...22,623,358
Ensembl chr12:22,517,482...22,623,358
JBrowse link
G PTGER3 prostaglandin E receptor 3 ISO RGD PMID:10923657 RGD:10043386 NCBI chr 6:74,932,789...74,986,573 JBrowse link
G PTGER4 prostaglandin E receptor 4 ISO RGD PMID:10923657 RGD:10043386 NCBI chr 4:68,663,362...68,676,241
Ensembl chr 4:68,663,364...68,676,358
JBrowse link
regulation of locomotor rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MTOR mechanistic target of rapamycin kinase IEA Ensembl GO_REF:0000107 NCBI chr 2:84,818,893...84,939,283
Ensembl chr 2:84,787,708...84,939,114
JBrowse link
G OPRL1 opioid related nociceptin receptor 1 ISO RGD PMID:16310969 RGD:9835023 NCBI chr24:47,530,039...47,537,477
Ensembl chr24:47,508,136...47,537,250
JBrowse link
G ZFHX3 zinc finger homeobox 3 ISO (MGI:MGI:5660827|PMID:26232227) UniProtKB PMID:26232227 MGI:MGI:5660827 NCBI chr 5:78,450,963...78,635,615
Ensembl chr 5:78,455,005...78,610,033
JBrowse link
regulation of progesterone secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GDF9 growth differentiation factor 9 IEA Ensembl GO_REF:0000107 NCBI chr11:21,143,982...21,148,945
Ensembl chr11:21,143,975...21,149,825
JBrowse link
rhythmic behavior term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHAT choline O-acetyltransferase ISO (MGI:MGI:3577822|PMID:15820692) MGI PMID:15820692 MGI:MGI:3577822 NCBI chr28:1,480,364...1,528,858
Ensembl chr28:1,482,202...1,528,776
JBrowse link
G EGR2 early growth response 2 IEA Ensembl GO_REF:0000107 NCBI chr 4:14,705,384...14,810,130
Ensembl chr 4:14,706,600...14,709,497
JBrowse link
ultradian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENOX1 ecto-NOX disulfide-thiol exchanger 1 IEA InterPro GO_REF:0000002 NCBI chr22:7,093,885...7,642,984
Ensembl chr22:7,259,071...7,673,453
JBrowse link
G ENOX2 ecto-NOX disulfide-thiol exchanger 2 IEA Ensembl
InterPro
GO_REF:0000002, GO_REF:0000107 NCBI chr  X:101,742,417...102,023,786
Ensembl chr  X:101,745,195...102,006,484
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16187
    rhythmic process 385
      circadian rhythm + 262
      ovulation cycle + 122
      ovulation cycle process + 78
      rhythmic behavior + 68
      ultradian rhythm + 2
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.