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ONTOLOGY REPORT - ANNOTATIONS


Term:rhythmic process
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Accession:GO:0048511 term browser browse the term
Definition:Any process pertinent to the generation and maintenance of rhythms in the physiology of an organism.
Synonyms:related_synonym: rhythm
 only_in_taxon: NCBITaxon:131567 ! cellular organisms


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rhythmic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AHR aryl hydrocarbon receptor IEA UniProt GO_REF:0000043 NCBI chr 9:86,511,866...86,555,950
Ensembl chr 9:86,511,369...86,555,943
JBrowse link
G CREBBP CREB binding protein IEA UniProt GO_REF:0000043 NCBI chr 3:38,388,366...38,530,243
Ensembl chr 3:38,388,547...38,530,230
JBrowse link
G DDX5 DEAD-box helicase 5 IEA UniProt GO_REF:0000043 NCBI chr12:14,571,712...14,580,740
Ensembl chr12:14,571,310...14,601,576
JBrowse link
G DNM1L dynamin 1 like IEA UniProt GO_REF:0000043 NCBI chr 5:41,571,054...41,636,058 JBrowse link
G GRIN1 glutamate ionotropic receptor NMDA type subunit 1 ISO RGD PMID:16477151 RGD:1642190
G GRIN2A glutamate ionotropic receptor NMDA type subunit 2A ISO RGD PMID:16477151 RGD:1642190 NCBI chr 3:32,749,329...33,149,350
Ensembl chr 3:32,752,351...33,143,499
JBrowse link
G GRIN2B glutamate ionotropic receptor NMDA type subunit 2B ISO RGD PMID:16477151 RGD:1642190 NCBI chr 5:58,477,862...58,948,735
Ensembl chr 5:58,480,526...58,927,583
JBrowse link
G GRIN3A glutamate ionotropic receptor NMDA type subunit 3A ISO RGD PMID:16477151 RGD:1642190 NCBI chr 1:243,263,202...243,416,739
Ensembl chr 1:243,259,493...243,415,590
JBrowse link
G HES7 hes family bHLH transcription factor 7 IEA Ensembl GO_REF:0000107 NCBI chr12:53,334,350...53,339,336
Ensembl chr12:53,334,901...53,337,376
JBrowse link
G MAPK10 mitogen-activated protein kinase 10 IEA UniProt GO_REF:0000043 NCBI chr 8:132,445,818...132,751,575
Ensembl chr 8:132,249,635...132,776,820
JBrowse link
G MAPK8 mitogen-activated protein kinase 8 IEA UniProt GO_REF:0000043 NCBI chr14:88,988,914...89,108,875
Ensembl chr14:88,988,949...89,172,200
JBrowse link
G MAPK9 mitogen-activated protein kinase 9 IEA UniProt GO_REF:0000043 NCBI chr 2:78,338,466...78,399,108
Ensembl chr 2:78,338,369...78,399,105
JBrowse link
G OGT O-linked N-acetylglucosamine (GlcNAc) transferase IEA UniProt GO_REF:0000043 NCBI chr  X:57,521,091...57,558,467
Ensembl chr  X:57,521,097...57,558,519
JBrowse link
G PER1 period circadian regulator 1 IEA UniProt GO_REF:0000043 NCBI chr12:53,361,863...53,376,723
Ensembl chr12:53,361,868...53,376,611
JBrowse link
G PER2 period circadian regulator 2 IEA UniProt GO_REF:0000043 NCBI chr15:137,793,419...137,837,854
Ensembl chr15:137,793,419...137,837,236
JBrowse link
G PPARG peroxisome proliferator activated receptor gamma IEA UniProt GO_REF:0000043 NCBI chr13:68,301,566...68,433,951
Ensembl chr13:68,302,655...68,433,947
JBrowse link
G PPARGC1A PPARG coactivator 1 alpha IEA UniProt GO_REF:0000043 NCBI chr 8:17,841,844...18,527,953
Ensembl chr 8:17,841,844...17,961,909
JBrowse link
G PRKAA1 protein kinase AMP-activated catalytic subunit alpha 1 IEA UniProt GO_REF:0000043 NCBI chr16:25,745,902...25,783,524
Ensembl chr16:25,745,321...25,783,610
JBrowse link
G PRKAA2 protein kinase AMP-activated catalytic subunit alpha 2 IEA UniProt GO_REF:0000043 NCBI chr 6:155,683,392...155,754,283
Ensembl chr 6:155,681,781...155,754,272
JBrowse link
G PRMT5 protein arginine methyltransferase 5 IEA UniProt GO_REF:0000043 NCBI chr 7:76,110,956...76,119,619
Ensembl chr 7:76,110,951...76,136,597
JBrowse link
G RACK1 receptor for activated C kinase 1 IEA UniProt GO_REF:0000043 NCBI chr 2:57,280,192...57,284,846
Ensembl chr 2:57,279,857...57,284,855
JBrowse link
G ROCK2 Rho associated coiled-coil containing protein kinase 2 IEA UniProt GO_REF:0000043 NCBI chr 3:125,353,063...125,493,368
Ensembl chr 3:125,353,119...125,491,963
JBrowse link
G SUV39H1 suppressor of variegation 3-9 homolog 1 IEA UniProt GO_REF:0000043 NCBI chr  X:42,797,309...42,811,457
Ensembl chr  X:42,797,828...42,814,003
JBrowse link
G SUV39H2 suppressor of variegation 3-9 homolog 2 IEA UniProt GO_REF:0000043 NCBI chr10:46,874,606...46,900,058
Ensembl chr10:46,862,584...46,900,040
JBrowse link
G TOP2A DNA topoisomerase II alpha IEA UniProt GO_REF:0000043 NCBI chr12:22,001,300...22,028,452
Ensembl chr12:22,001,336...22,028,454
JBrowse link
G TP63 tumor protein p63 IEA UniProt GO_REF:0000043 NCBI chr13:127,115,990...127,347,082
Ensembl chr13:127,116,104...127,347,075
JBrowse link
G TP73 tumor protein p73 IEA UniProt GO_REF:0000043 NCBI chr 6:65,169,770...65,228,997
Ensembl chr 6:65,177,682...65,228,992
JBrowse link
antral ovarian follicle growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCNE1 cyclin E1 ISO RGD PMID:17084963 RGD:2289278 NCBI chr 6:39,919,541...39,933,224
Ensembl chr 6:39,919,624...39,933,366
JBrowse link
G CHAT choline O-acetyltransferase ISO RGD PMID:16846505 RGD:1600848 NCBI chr14:90,117,464...90,167,611
Ensembl chr14:90,117,464...90,167,611
JBrowse link
G ESR1 estrogen receptor 1 IEA Ensembl GO_REF:0000107 NCBI chr 1:14,217,032...14,604,906
Ensembl chr 1:14,217,036...14,493,363
JBrowse link
G FOXO3 forkhead box O3 IEA Ensembl GO_REF:0000107 NCBI chr 1:74,626,673...74,760,323
Ensembl chr 1:74,628,217...74,760,328
JBrowse link
G GAS2 growth arrest specific 2 IEA Ensembl GO_REF:0000107 NCBI chr 2:36,712,758...36,885,436
Ensembl chr 2:36,711,609...36,885,620
JBrowse link
G GPR149 G protein-coupled receptor 149 IEA Ensembl GO_REF:0000107 NCBI chr13:94,356,371...94,419,917
Ensembl chr13:94,354,306...94,419,184
JBrowse link
apoptotic process involved in luteolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ROBO2 roundabout guidance receptor 2 IEA Ensembl GO_REF:0000107 NCBI chr13:177,365,712...179,040,027
Ensembl chr13:177,365,717...179,013,542
JBrowse link
G SLIT2 slit guidance ligand 2 IEA Ensembl GO_REF:0000107 NCBI chr 8:14,758,426...15,149,515
Ensembl chr 8:14,756,619...15,149,510
JBrowse link
G SLIT3 slit guidance ligand 3 IEA Ensembl GO_REF:0000107 NCBI chr16:54,551,536...55,221,427
Ensembl chr16:54,553,933...55,220,310
JBrowse link
circadian behavior term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BTBD9 BTB domain containing 9 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:33,723,077...34,122,673
Ensembl chr 7:33,720,013...34,122,662
JBrowse link
G GPR157 G protein-coupled receptor 157 IEA Ensembl GO_REF:0000107 NCBI chr 6:69,558,940...69,581,656
Ensembl chr 6:69,556,455...69,581,651
JBrowse link
G GPR176 G protein-coupled receptor 176 IEA Ensembl GO_REF:0000107 NCBI chr 1:131,355,332...131,494,967
Ensembl chr 1:131,355,327...131,494,963
JBrowse link
G LOC100523244 casein kinase I ISO RGD PMID:17502429 RGD:10395242 NCBI chr 5:9,594,461...9,620,483 JBrowse link
G NR1D2 nuclear receptor subfamily 1 group D member 2 ISO (MGI:MGI:6157418|PMID:29723273) UniProt PMID:29723273 MGI:MGI:6157418 NCBI chr13:10,756,954...10,791,219
Ensembl chr13:10,756,926...10,791,210
JBrowse link
G SIX3 SIX homeobox 3 IEA Ensembl GO_REF:0000107 NCBI chr 3:95,521,330...95,527,004
Ensembl chr 3:95,521,333...95,525,436
JBrowse link
G TP53 tumor protein p53 ISS
IEA
UniProt
Ensembl
GO_REF:0000024, GO_REF:0000107 NCBI chr12:52,939,643...52,953,786
Ensembl chr12:52,939,643...52,953,819
JBrowse link
G USP2 ubiquitin specific peptidase 2 ISO (MGI:MGI:5607210|PMID:23213472) UniProtKB PMID:23213472 MGI:MGI:5607210 NCBI chr 9:46,563,469...46,590,392
Ensembl chr 9:46,563,480...46,590,265
JBrowse link
circadian regulation of gene expression term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADK adenosine kinase ISO RGD PMID:12675911 RGD:2291861 NCBI chr14:76,836,072...77,320,586
Ensembl chr14:76,836,095...77,322,416
JBrowse link
G AHR aryl hydrocarbon receptor ISO (MGI:MGI:4820700|PMID:20106950) UniProtKB PMID:20106950 MGI:MGI:4820700 NCBI chr 9:86,511,866...86,555,950
Ensembl chr 9:86,511,369...86,555,943
JBrowse link
G ARNTL aryl hydrocarbon receptor nuclear translocator like IEA Ensembl GO_REF:0000107 NCBI chr 2:45,895,637...46,025,174
Ensembl chr 2:45,895,289...46,025,165
JBrowse link
G ATF4 activating transcription factor 4 IEA Ensembl GO_REF:0000107 NCBI chr 5:8,742,964...8,745,752
Ensembl chr 5:8,738,880...8,745,225
JBrowse link
G BHLHE40 basic helix-loop-helix family member e40 IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr13:61,526,121...61,533,686
Ensembl chr13:61,526,197...61,533,686
JBrowse link
G BHLHE41 basic helix-loop-helix family member e41 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:47,687,662...47,692,761
Ensembl chr 5:47,686,404...47,692,762
JBrowse link
G CARTPT CART prepropeptide ISS HGNC GO_REF:0000024 NCBI chr16:48,043,558...48,045,592
Ensembl chr16:48,043,407...48,045,590
JBrowse link
G CAVIN3 caveolae associated protein 3 IEA Ensembl GO_REF:0000107 NCBI chr 9:3,378,144...3,379,851
Ensembl chr 9:3,378,207...3,379,848
JBrowse link
G CIART circadian associated repressor of transcription IEA InterPro
Ensembl
GO_REF:0000002, GO_REF:0000107 NCBI chr 4:98,800,849...98,809,573
Ensembl chr 4:98,800,930...98,814,553
JBrowse link
G CLOCK clock circadian regulator IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr 8:54,793,323...54,910,192
Ensembl chr 8:54,788,864...54,910,146
JBrowse link
G CREM cAMP responsive element modulator ISO (MGI:MGI:5494765|PMID:23443664) UniProtKB PMID:23443664 MGI:MGI:5494765 NCBI chr10:57,829,523...57,895,610
Ensembl chr10:57,829,518...57,895,610
JBrowse link
G CRY1 cryptochrome circadian regulator 1 IEA Ensembl GO_REF:0000107 NCBI chr 5:13,275,265...13,429,566
Ensembl chr 5:13,275,544...13,364,594
JBrowse link
G CRY2 cryptochrome circadian regulator 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:16,587,101...16,620,380
Ensembl chr 2:16,585,966...16,620,405
JBrowse link
G CSNK1D casein kinase 1 delta IEA Ensembl GO_REF:0000107 NCBI chr12:768,856...794,495
Ensembl chr12:768,865...796,532
JBrowse link
G DRD2 dopamine receptor D2 IEA Ensembl GO_REF:0000107 NCBI chr 9:41,068,618...41,135,262
Ensembl chr 9:41,068,779...41,133,599
JBrowse link
G DRD3 dopamine receptor D3 IEA Ensembl GO_REF:0000107 NCBI chr13:145,769,294...145,817,997
Ensembl chr13:145,771,510...145,819,173
JBrowse link
G EGR1 early growth response 1 IEA Ensembl GO_REF:0000107 NCBI chr 2:140,440,829...140,445,302
Ensembl chr 2:140,441,421...140,445,296
JBrowse link
G GFPT1 glutamine--fructose-6-phosphate transaminase 1 IEA Ensembl GO_REF:0000107 NCBI chr 3:73,028,750...73,086,191
Ensembl chr 3:72,983,188...73,085,319
JBrowse link
G HDAC1 histone deacetylase 1 IEA Ensembl GO_REF:0000107 NCBI chr 6:88,749,611...88,785,220
Ensembl chr 6:88,749,634...88,785,412
JBrowse link
G HDAC2 histone deacetylase 2 ISO (MGI:MGI:5567917|PMID:15226430) UniProtKB PMID:15226430 MGI:MGI:5567917 NCBI chr 1:79,867,713...79,901,597
Ensembl chr 1:79,863,094...79,901,585
JBrowse link
G HDAC3 histone deacetylase 3 ISO (MGI:MGI:5882311|PMID:26776516)
(MGI:MGI:3821398|PMID:19037247)
UniProt
MGI
PMID:19037247, PMID:26776516 MGI:MGI:3821398, MGI:MGI:5882311 NCBI chr 2:143,273,188...143,287,421
Ensembl chr 2:143,273,191...143,287,387
JBrowse link
G HNF1B HNF1 homeobox B ISO RGD PMID:9545279 RGD:2312721 NCBI chr12:39,143,119...39,201,631
Ensembl chr12:39,143,121...39,313,511
JBrowse link
G HNRNPU heterogeneous nuclear ribonucleoprotein U IEA Ensembl GO_REF:0000107 NCBI chr10:17,475,266...17,497,060
Ensembl chr10:17,475,270...17,497,130
JBrowse link
G HUWE1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 IEA Ensembl GO_REF:0000107 NCBI chr  X:46,281,958...46,444,315
Ensembl chr  X:46,282,415...46,441,623
JBrowse link
G ID1 inhibitor of DNA binding 1, HLH protein IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:35,316,518...35,317,742
Ensembl chr17:35,315,964...35,317,744
JBrowse link
G ID2 inhibitor of DNA binding 2 ISS
IBA
(PMID:21873635) UniProt
GO_Central
PMID:21873635 GO_REF:0000024 NCBI chr 3:127,500,759...127,503,207
Ensembl chr 3:127,500,759...127,503,257
JBrowse link
G ID3 inhibitor of DNA binding 3, HLH protein IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:81,422,541...81,424,169
Ensembl chr 6:81,422,539...81,424,075
JBrowse link
G ID4 inhibitor of DNA binding 4, HLH protein IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:15,281,535...15,284,895
Ensembl chr 7:15,281,621...15,284,022
JBrowse link
G KDM2A lysine demethylase 2A IEA Ensembl GO_REF:0000107 NCBI chr 2:5,238,690...5,357,799
Ensembl chr 2:5,240,287...5,357,164
JBrowse link
G KDM5A lysine demethylase 5A IEA Ensembl GO_REF:0000107 NCBI chr 5:67,628,791...67,716,143
Ensembl chr 5:67,629,380...67,716,651
JBrowse link
G KDM8 lysine demethylase 8 IEA Ensembl GO_REF:0000107 NCBI chr 3:19,653,396...19,676,207
Ensembl chr 3:19,650,615...19,676,148
JBrowse link
G KMT2A lysine methyltransferase 2A IEA Ensembl GO_REF:0000107 NCBI chr 9:45,743,566...45,828,559 JBrowse link
G LGR4 leucine rich repeat containing G protein-coupled receptor 4 IEA Ensembl GO_REF:0000107 NCBI chr 2:32,871,837...32,979,150
Ensembl chr 2:32,871,871...32,979,148
JBrowse link
G LOC100523244 casein kinase I IEA Ensembl GO_REF:0000107 NCBI chr 5:9,594,461...9,620,483 JBrowse link
G MAGED1 MAGE family member D1 IEA Ensembl GO_REF:0000107 NCBI chr  X:45,258,761...45,329,282
Ensembl chr  X:45,282,056...45,329,278
JBrowse link
G MC3R melanocortin 3 receptor IEA Ensembl GO_REF:0000107 NCBI chr17:56,868,525...56,869,605
Ensembl chr17:56,868,525...56,869,605
JBrowse link
G MTA1 metastasis associated 1 ISO (MGI:MGI:5582861|PMID:24089055) UniProtKB PMID:24089055 MGI:MGI:5582861
G MYBBP1A MYB binding protein 1a IEA Ensembl GO_REF:0000107 NCBI chr12:50,491,042...50,506,085
Ensembl chr12:50,491,046...50,506,050
JBrowse link
G MYCBP2 MYC binding protein 2 IEA Ensembl GO_REF:0000107 NCBI chr11:49,163,969...49,432,865
Ensembl chr11:49,164,141...49,432,858
JBrowse link
G NAMPT nicotinamide phosphoribosyltransferase ISS
IEA
UniProt GO_REF:0000024, GO_REF:0000104 NCBI chr 9:106,119,896...106,162,126
Ensembl chr 9:106,119,899...106,294,587
JBrowse link
G NCOA2 nuclear receptor coactivator 2 IEA Ensembl GO_REF:0000107 NCBI chr 4:64,888,029...65,245,757
Ensembl chr 4:64,954,120...65,246,572
JBrowse link
G NCOR1 nuclear receptor corepressor 1 ISO (MGI:MGI:3821398|PMID:19037247) MGI PMID:19037247 MGI:MGI:3821398 NCBI chr12:59,256,868...59,392,564 JBrowse link
G NGFR nerve growth factor receptor ISO (MGI:MGI:5503234|PMID:23785138) UniProtKB PMID:23785138 MGI:MGI:5503234 NCBI chr12:25,699,410...25,720,355
Ensembl chr12:25,699,427...25,720,357
JBrowse link
G NOCT nocturnin IEA Ensembl
InterPro
GO_REF:0000002, GO_REF:0000107 NCBI chr 8:87,885,411...87,909,231
Ensembl chr 8:87,885,412...87,909,655
JBrowse link
G NPAS2 neuronal PAS domain protein 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:53,298,805...53,490,375
Ensembl chr 3:53,298,863...53,438,910
JBrowse link
G NR0B2 nuclear receptor subfamily 0 group B member 2 IEA Ensembl GO_REF:0000107 NCBI chr 6:84,225,670...84,228,156
Ensembl chr 6:84,225,694...84,228,094
JBrowse link
G NR1D1 nuclear receptor subfamily 1 group D member 1 IEA Ensembl GO_REF:0000107 NCBI chr12:22,263,549...22,274,131
Ensembl chr12:22,263,657...22,271,643
JBrowse link
G NRIP1 nuclear receptor interacting protein 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:179,822,731...179,916,226
Ensembl chr13:179,824,862...179,915,177
JBrowse link
G OGT O-linked N-acetylglucosamine (GlcNAc) transferase ISS
IEA
UniProt
Ensembl
GO_REF:0000024, GO_REF:0000107 NCBI chr  X:57,521,091...57,558,467
Ensembl chr  X:57,521,097...57,558,519
JBrowse link
G PER1 period circadian regulator 1 IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr12:53,361,863...53,376,723
Ensembl chr12:53,361,868...53,376,611
JBrowse link
G PER2 period circadian regulator 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:137,793,419...137,837,854
Ensembl chr15:137,793,419...137,837,236
JBrowse link
G PER3 period circadian regulator 3 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:68,487,634...68,548,718 JBrowse link
G PML PML nuclear body scaffold IEA Ensembl GO_REF:0000107 NCBI chr 7:59,405,044...59,450,155
Ensembl chr 7:59,405,048...59,450,150
JBrowse link
G PPARA peroxisome proliferator activated receptor alpha IEA Ensembl GO_REF:0000107 NCBI chr 5:3,302,755...3,321,091
Ensembl chr 5:3,300,708...3,366,361
JBrowse link
G PPARGC1A PPARG coactivator 1 alpha ISS UniProt GO_REF:0000024 NCBI chr 8:17,841,844...18,527,953
Ensembl chr 8:17,841,844...17,961,909
JBrowse link
G PPP1CA protein phosphatase 1 catalytic subunit alpha IEA Ensembl GO_REF:0000107 NCBI chr 2:5,120,202...5,123,168
Ensembl chr 2:5,120,140...5,126,953
JBrowse link
G PPP1CB protein phosphatase 1 catalytic subunit beta ISS
IEA
IBA
(PMID:21873635) UniProt
Ensembl
GO_Central
PMID:21873635 GO_REF:0000024, GO_REF:0000107 NCBI chr 3:110,437,681...110,474,896
Ensembl chr 3:110,437,687...110,474,891
JBrowse link
G PPP1CC protein phosphatase 1 catalytic subunit gamma IEA Ensembl GO_REF:0000107 NCBI chr14:32,071,472...32,091,267
Ensembl chr14:32,070,544...32,091,499
JBrowse link
G PRKG2 protein kinase cGMP-dependent 2 ISO (MGI:MGI:3630244|PMID:12725729) MGI PMID:12725729 MGI:MGI:3630244 NCBI chr 8:136,754,698...136,854,589
Ensembl chr 8:136,755,469...136,852,906
JBrowse link
G PRMT5 protein arginine methyltransferase 5 ISO (MGI:MGI:5464222|PMID:23133559) UniProtKB PMID:23133559 MGI:MGI:5464222 NCBI chr 7:76,110,956...76,119,619
Ensembl chr 7:76,110,951...76,136,597
JBrowse link
G RAI1 retinoic acid induced 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:60,751,159...60,854,710
Ensembl chr12:60,750,091...60,855,287
JBrowse link
G RBM4 RNA binding motif protein 4 ISO (MGI:MGI:3703208|PMID:17264215) MGI PMID:17264215 MGI:MGI:3703208 NCBI chr 2:5,776,535...5,784,337
Ensembl chr 2:5,759,062...5,800,832
JBrowse link
G RBM4B RNA binding motif protein 4B ISS UniProt GO_REF:0000024 NCBI chr 2:5,745,364...5,758,177 JBrowse link
G RELB RELB proto-oncogene, NF-kB subunit IEA Ensembl GO_REF:0000107 NCBI chr 6:51,444,670...51,480,350
Ensembl chr 6:51,444,636...51,480,320
JBrowse link
G RORA RAR related orphan receptor A IEA Ensembl GO_REF:0000107 NCBI chr 1:110,719,004...111,482,807
Ensembl chr 1:110,719,190...111,477,703
JBrowse link
G RORC RAR related orphan receptor C ISO (MGI:MGI:5504349|PMID:22753030), (MGI:MGI:5582866|PMID:23723244) UniProtKB PMID:22753030, PMID:23723244 MGI:MGI:5504349, MGI:MGI:5582866 NCBI chr 4:97,374,672...97,399,017
Ensembl chr 4:97,375,136...97,400,231
JBrowse link
G SIRT1 sirtuin 1 IEA Ensembl GO_REF:0000107 NCBI chr14:71,091,167...71,126,351
Ensembl chr14:71,091,157...71,123,299
JBrowse link
G TOP1 DNA topoisomerase I IEA Ensembl GO_REF:0000107 NCBI chr17:43,710,270...43,799,700
Ensembl chr17:43,710,290...43,799,700
JBrowse link
G USP2 ubiquitin specific peptidase 2 IEA Ensembl GO_REF:0000107 NCBI chr 9:46,563,469...46,590,392
Ensembl chr 9:46,563,480...46,590,265
JBrowse link
G ZFHX3 zinc finger homeobox 3 ISO (MGI:MGI:5660827|PMID:26232227) UniProtKB PMID:26232227 MGI:MGI:5660827 NCBI chr 6:15,693,987...15,941,301
Ensembl chr 6:15,698,176...16,023,169
JBrowse link
G ZPBP2 zona pellucida binding protein 2 ISO (MGI:MGI:6364050|PMID:31560728) MGI PMID:31560728 MGI:MGI:6364050 NCBI chr12:22,454,974...22,462,918
Ensembl chr12:22,454,184...22,462,936
JBrowse link
circadian regulation of translation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HNRNPD heterogeneous nuclear ribonucleoprotein D IEA Ensembl GO_REF:0000107 NCBI chr 8:135,844,492...135,862,633
Ensembl chr 8:135,844,487...135,862,633
JBrowse link
G PER1 period circadian regulator 1 IEA Ensembl GO_REF:0000107 NCBI chr12:53,361,863...53,376,723
Ensembl chr12:53,361,868...53,376,611
JBrowse link
G PER2 period circadian regulator 2 ISO (MGI:MGI:1935010|PMID:11395012) UniProtKB PMID:11395012 MGI:MGI:1935010 NCBI chr15:137,793,419...137,837,854
Ensembl chr15:137,793,419...137,837,236
JBrowse link
G RBM4 RNA binding motif protein 4 ISO (MGI:MGI:3703208|PMID:17264215) UniProtKB PMID:17264215 MGI:MGI:3703208 NCBI chr 2:5,776,535...5,784,337
Ensembl chr 2:5,759,062...5,800,832
JBrowse link
circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCB1 ATP-binding cassette, sub-family B (MDR/TAP), member 1 ISO RGD PMID:20668054 RGD:4890035 NCBI chr 9:93,049,955...93,146,469 JBrowse link
G ACTB actin beta ISO RGD PMID:9483199 RGD:11552588 NCBI chr 3:4,084,275...4,090,383
Ensembl chr 3:4,082,216...4,090,356
JBrowse link
G ADCY1 adenylate cyclase 1 ISO RGD PMID:8855334 RGD:1625750 NCBI chr18:50,043,572...50,143,549
Ensembl chr18:50,046,575...50,143,771
JBrowse link
G ADCY6 adenylate cyclase 6 ISO RGD PMID:16166080 RGD:2312676 NCBI chr 5:14,834,420...14,855,309
Ensembl chr 5:14,834,426...14,850,728
JBrowse link
G ADIPOQ adiponectin, C1Q and collagen domain containing ISO RGD PMID:21164040 RGD:5128545 NCBI chr13:124,633,906...124,646,237
Ensembl chr13:124,633,684...124,646,648
JBrowse link
G AGRP agouti related neuropeptide ISO RGD PMID:21060311 RGD:8693680 NCBI chr 6:28,132,614...28,135,594
Ensembl chr 6:28,132,615...28,133,743
JBrowse link
G ARNTL aryl hydrocarbon receptor nuclear translocator like ISO (MGI:MGI:2179885|PMID:12024206), (MGI:MGI:2183702|PMID:12150932), (MGI:MGI:2667759|PMID:12843397), (MGI:MGI:2669067|PMID:12897057)
(MGI:MGI:1928563|PMID:11163178)
(PMID:14645221), (PMID:19217292), (PMID:19740747)
(MGI:MGI:3703208|PMID:17264215)
MGI
UniProtKB
RGD
PMID:9735336, PMID:9878515, PMID:11163178, PMID:12024206, PMID:12150932, PMID:12843397, PMID:12897057, PMID:14645221, PMID:17264215, PMID:19217292, PMID:19740747 MGI:MGI:1928563, MGI:MGI:2179885, MGI:MGI:2183702, MGI:MGI:2667759, MGI:MGI:2669067, MGI:MGI:3703208, RGD:10043346, RGD:67927 NCBI chr 2:45,895,637...46,025,174
Ensembl chr 2:45,895,289...46,025,165
JBrowse link
G ARNTL2 aryl hydrocarbon receptor nuclear translocator like 2 IEA Ensembl GO_REF:0000107 NCBI chr 5:46,289,873...46,482,369
Ensembl chr 5:46,290,005...46,482,280
JBrowse link
G ASS1 argininosuccinate synthase 1 IEA Ensembl GO_REF:0000107 NCBI chr 1:270,531,434...270,586,364
Ensembl chr 1:270,531,589...270,586,361
JBrowse link
G ATF4 activating transcription factor 4 ISO (PMID:21768648) UniProtKB PMID:21768648 NCBI chr 5:8,742,964...8,745,752
Ensembl chr 5:8,738,880...8,745,225
JBrowse link
G ATF5 activating transcription factor 5 IEA Ensembl GO_REF:0000107 NCBI chr 6:54,945,067...54,950,142
Ensembl chr 6:54,945,119...54,950,137
JBrowse link
G ATOH7 atonal bHLH transcription factor 7 ISO (MGI:MGI:2445865|PMID:12451142) MGI PMID:12451142 MGI:MGI:2445865 NCBI chr14:71,398,939...71,402,479
Ensembl chr14:71,400,980...71,401,447
JBrowse link
G ATP7B ATPase copper transporting beta ISO RGD PMID:9920665 RGD:1599396 NCBI chr11:15,892,549...15,942,070 JBrowse link
G BDNF brain derived neurotrophic factor IEA Ensembl GO_REF:0000107 NCBI chr 2:32,623,668...32,679,293
Ensembl chr 2:32,623,268...32,679,164
JBrowse link
G BHLHE40 basic helix-loop-helix family member e40 ISO (PMID:15038852), (PMID:19786558)
PMID:12397359
(PMID:28797635)
UniProtKB
UniProt
PMID:12397359, PMID:15038852, PMID:19786558, PMID:28797635 RGD:625726 NCBI chr13:61,526,121...61,533,686
Ensembl chr13:61,526,197...61,533,686
JBrowse link
G BHLHE41 basic helix-loop-helix family member e41 ISO (PMID:15038852), (PMID:19786558)
PMID:12397359
UniProtKB
UniProt
PMID:12397359, PMID:15038852, PMID:19786558 RGD:625726 NCBI chr 5:47,687,662...47,692,761
Ensembl chr 5:47,686,404...47,692,762
JBrowse link
G CDK4 cyclin dependent kinase 4 ISO RGD PMID:11598123 RGD:70761 NCBI chr 5:23,039,206...23,041,959
Ensembl chr 5:23,038,889...23,042,061
JBrowse link
G CLDN4 claudin 4 ISO RGD PMID:20091493 RGD:8693638 NCBI chr 3:11,039,711...11,053,930
Ensembl chr 3:11,039,706...11,053,925
JBrowse link
G CLOCK clock circadian regulator ISO (PMID:14645221)
(MGI:MGI:2179885|PMID:12024206), (MGI:MGI:66027|PMID:8171325)
(MGI:MGI:2669067|PMID:12897057)
UniProtKB
MGI
RGD
PMID:8171325, PMID:10471199, PMID:12024206, PMID:12897057, PMID:14645221 MGI:MGI:2179885, MGI:MGI:2669067, MGI:MGI:66027, RGD:10401879 NCBI chr 8:54,793,323...54,910,192
Ensembl chr 8:54,788,864...54,910,146
JBrowse link
G CREB1 cAMP responsive element binding protein 1 IEA Ensembl GO_REF:0000107 NCBI chr15:110,705,548...110,773,037
Ensembl chr15:110,697,408...110,771,755
JBrowse link
G CREM cAMP responsive element modulator ISO (PMID:23443664) UniProtKB PMID:23443664 NCBI chr10:57,829,523...57,895,610
Ensembl chr10:57,829,518...57,895,610
JBrowse link
G CRX cone-rod homeobox ISO RGD PMID:9465110 RGD:1600977 NCBI chr 6:53,506,410...53,509,858
Ensembl chr 6:53,506,410...53,512,191
JBrowse link
G CRY1 cryptochrome circadian regulator 1 ISO (MGI:MGI:2667759|PMID:12843397)
(MGI:MGI:2179885|PMID:12024206)
(PMID:23133559)
(MGI:MGI:3703208|PMID:17264215), (MGI:MGI:6294193|PMID:29561690)
MGI
UniProtKB
PMID:12024206, PMID:12843397, PMID:17264215, PMID:23133559, PMID:29561690 MGI:MGI:2179885, MGI:MGI:2667759, MGI:MGI:3703208, MGI:MGI:6294193 NCBI chr 5:13,275,265...13,429,566
Ensembl chr 5:13,275,544...13,364,594
JBrowse link
G CRY2 cryptochrome circadian regulator 2 ISO (MGI:MGI:3703208|PMID:17264215), (MGI:MGI:4461092|PMID:20123978), (MGI:MGI:6294193|PMID:29561690)
(MGI:MGI:2179885|PMID:12024206)
MGI
RGD
PMID:11804325, PMID:12024206, PMID:17264215, PMID:20123978, PMID:29561690 MGI:MGI:2179885, MGI:MGI:3703208, MGI:MGI:4461092, MGI:MGI:6294193, RGD:632584 NCBI chr 2:16,587,101...16,620,380
Ensembl chr 2:16,585,966...16,620,405
JBrowse link
G DBP D-box binding PAR bZIP transcription factor IEA InterPro GO_REF:0000002 NCBI chr 6:53,986,955...53,993,044
Ensembl chr 6:53,986,959...53,993,020
JBrowse link
G DDC dopa decarboxylase ISO RGD PMID:12047348 RGD:727571 NCBI chr 9:136,496,364...136,571,220
Ensembl chr 9:136,495,891...136,571,197
JBrowse link
G DDX5 DEAD-box helicase 5 ISO (MGI:MGI:5430667|PMID:22767893) MGI PMID:22767893 MGI:MGI:5430667 NCBI chr12:14,571,712...14,580,740
Ensembl chr12:14,571,310...14,601,576
JBrowse link
G DHX9 DExH-box helicase 9 ISO (MGI:MGI:5430667|PMID:22767893) MGI PMID:22767893 MGI:MGI:5430667 NCBI chr 9:124,141,929...124,183,838
Ensembl chr 9:124,093,667...124,185,352
JBrowse link
G DPYD dihydropyrimidine dehydrogenase ISO RGD PMID:3202908, PMID:8504424, PMID:19628084 RGD:11251745, RGD:1599793, RGD:5133425 NCBI chr 4:119,931,471...120,712,461
Ensembl chr 4:119,931,458...120,712,462
JBrowse link
G DRD4 dopamine receptor D4 ISO RGD PMID:18778704 RGD:7175073 NCBI chr 2:398,766...401,539
Ensembl chr 2:398,766...401,432
JBrowse link
G DYRK1A dual specificity tyrosine phosphorylation regulated kinase 1A IEA Ensembl GO_REF:0000107 NCBI chr13:201,008,506...201,159,946
Ensembl chr13:201,008,830...201,159,954
JBrowse link
G EGFR epidermal growth factor receptor ISO RGD PMID:12454858 RGD:2289959 NCBI chr 9:139,302,410...139,474,632
Ensembl chr 9:139,300,022...139,478,882
JBrowse link
G EGR1 early growth response 1 ISO RGD PMID:21363938 RGD:5131656 NCBI chr 2:140,440,829...140,445,302
Ensembl chr 2:140,441,421...140,445,296
JBrowse link
G EP300 E1A binding protein p300 IEA Ensembl GO_REF:0000107 NCBI chr 5:7,311,165...7,394,515
Ensembl chr 5:7,311,171...7,393,760
JBrowse link
G ERBB3 erb-b2 receptor tyrosine kinase 3 ISO RGD PMID:12454858 RGD:2289959 NCBI chr 5:21,474,218...21,495,040
Ensembl chr 5:21,431,656...21,496,279
JBrowse link
G F7 coagulation factor VII ISO RGD PMID:2607889 RGD:2312319 NCBI chr11:78,512,389...78,518,668
Ensembl chr11:78,512,158...78,518,671
JBrowse link
G FAS Fas cell surface death receptor ISO (PMID:23785138) UniProtKB PMID:23785138 NCBI chr14:100,927,305...100,954,781 JBrowse link
G FOSL2 FOS like 2, AP-1 transcription factor subunit ISO RGD PMID:10987819, PMID:21367864 RGD:2293795, RGD:7247438 NCBI chr 3:110,820,403...110,842,903
Ensembl chr 3:110,823,666...110,843,068
JBrowse link
G GSK3B glycogen synthase kinase 3 beta ISO (MGI:MGI:4461092|PMID:20123978) UniProtKB PMID:20123978 MGI:MGI:4461092 NCBI chr13:140,136,109...140,370,197
Ensembl chr13:140,136,158...140,369,574
JBrowse link
G HDAC1 histone deacetylase 1 ISO (MGI:MGI:5568140|PMID:24736997) UniProtKB PMID:24736997 MGI:MGI:5568140 NCBI chr 6:88,749,611...88,785,220
Ensembl chr 6:88,749,634...88,785,412
JBrowse link
G HMGB1 high mobility group box 1 ISO RGD PMID:17226794 RGD:2316777 NCBI chr11:7,195,556...7,321,071 JBrowse link
G HNRNPL heterogeneous nuclear ribonucleoprotein L ISO RGD PMID:15798208 RGD:9854643 NCBI chr 6:47,643,561...47,655,856
Ensembl chr 6:47,530,238...47,655,557
JBrowse link
G HNRNPR heterogeneous nuclear ribonucleoprotein R ISO RGD PMID:15798208 RGD:9854643 NCBI chr 6:81,203,067...81,239,823
Ensembl chr 6:81,184,833...81,239,135
JBrowse link
G HOMER1 homer scaffold protein 1 ISO RGD PMID:15308308 RGD:2316907 NCBI chr 2:88,116,664...88,253,843
Ensembl chr 2:88,122,877...88,255,281
JBrowse link
G HS3ST2 heparan sulfate-glucosamine 3-sulfotransferase 2 ISO RGD PMID:12601002 RGD:1299550 NCBI chr 3:23,255,936...23,366,570
Ensembl chr 3:23,255,961...23,366,219
JBrowse link
G HTR7 5-hydroxytryptamine receptor 7 IEA InterPro GO_REF:0000002 NCBI chr14:102,443,312...102,548,894
Ensembl chr14:102,444,566...102,548,931
JBrowse link
G ID1 inhibitor of DNA binding 1, HLH protein ISO (PMID:19217292) UniProtKB PMID:19217292 NCBI chr17:35,316,518...35,317,742
Ensembl chr17:35,315,964...35,317,744
JBrowse link
G ID2 inhibitor of DNA binding 2 ISO (PMID:19217292), (PMID:19740747) UniProtKB PMID:19217292, PMID:19740747 NCBI chr 3:127,500,759...127,503,207
Ensembl chr 3:127,500,759...127,503,257
JBrowse link
G ID3 inhibitor of DNA binding 3, HLH protein ISO (PMID:19217292) UniProtKB PMID:19217292 NCBI chr 6:81,422,541...81,424,169
Ensembl chr 6:81,422,539...81,424,075
JBrowse link
G ID4 inhibitor of DNA binding 4, HLH protein ISO (PMID:19217292) UniProtKB PMID:19217292 NCBI chr 7:15,281,535...15,284,895
Ensembl chr 7:15,281,621...15,284,022
JBrowse link
G IGF1 insulin like growth factor 1 ISO (PMID:20685873) UniProtKB PMID:20685873 NCBI chr 5:81,762,027...81,909,253
Ensembl chr 5:81,775,970...81,848,037
JBrowse link
G IMPDH2 inosine monophosphate dehydrogenase 2 IEA Ensembl GO_REF:0000107 NCBI chr13:31,658,642...31,663,660
Ensembl chr13:31,658,642...31,714,455
JBrowse link
G JUN Jun proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:10987819 RGD:2293795 NCBI chr 6:153,686,425...153,687,635 JBrowse link
G JUND JunD proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:10987819 RGD:2293795 NCBI chr 2:59,530,991...59,532,846 JBrowse link
G KCNH7 potassium voltage-gated channel subfamily H member 7 ISO RGD PMID:17322986 RGD:2314391 NCBI chr15:69,053,456...69,555,144
Ensembl chr15:69,059,270...69,554,981
JBrowse link
G KCNMA1 potassium calcium-activated channel subfamily M alpha 1 ISO (MGI:MGI:3654773|PMID:16845385) MGI PMID:16845385 MGI:MGI:3654773 NCBI chr14:79,345,382...80,106,337
Ensembl chr14:79,352,396...80,106,258
JBrowse link
G KLF10 Kruppel like factor 10 IEA Ensembl GO_REF:0000107 NCBI chr 4:34,430,132...34,435,990
Ensembl chr 4:34,421,359...34,436,009
JBrowse link
G KLF9 Kruppel like factor 9 IEA Ensembl GO_REF:0000107 NCBI chr 1:223,723,613...223,747,661
Ensembl chr 1:223,720,445...223,748,226
JBrowse link
G LEP leptin ISO RGD PMID:21164040 RGD:5128545 NCBI chr18:20,106,867...20,124,071
Ensembl chr18:20,106,868...20,123,447
JBrowse link
G LGR4 leucine rich repeat containing G protein-coupled receptor 4 ISO (PMID:24353284) UniProtKB PMID:24353284 NCBI chr 2:32,871,837...32,979,150
Ensembl chr 2:32,871,871...32,979,148
JBrowse link
G LIPC lipase C, hepatic type ISO plasma hepatic lipase activity RGD PMID:9728079 RGD:2307452 NCBI chr 1:113,433,684...113,604,139
Ensembl chr 1:113,433,679...113,604,306
JBrowse link
G LOC100518330 serotonin N-acetyltransferase IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr12:5,042,897...5,047,626
Ensembl chr12:5,037,172...5,055,486
JBrowse link
G LOC100738003 25-hydroxycholesterol 7-alpha-hydroxylase-like ISO RGD PMID:12759897 RGD:1298869 NCBI chr 4:69,615,953...69,793,131
Ensembl chr 4:69,616,035...69,806,496
JBrowse link
G MAT2A methionine adenosyltransferase 2A ISO RGD PMID:15504733 RGD:1598692 NCBI chr 3:59,220,203...59,225,097
Ensembl chr 3:59,211,157...59,225,261
JBrowse link
G METTL3 methyltransferase like 3 ISO (MGI:MGI:5527005|PMID:24209618) UniProtKB PMID:24209618 MGI:MGI:5527005 NCBI chr 7:77,661,945...77,679,459
Ensembl chr 7:77,662,058...77,695,948
JBrowse link
G MTNR1A melatonin receptor 1A IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:8,597,047...8,618,746
Ensembl chr17:8,597,004...8,617,657
JBrowse link
G MTTP microsomal triglyceride transfer protein IEA Ensembl GO_REF:0000107 NCBI chr 8:120,820,660...120,871,468
Ensembl chr 8:120,819,142...120,879,388
JBrowse link
G NAMPT nicotinamide phosphoribosyltransferase ISO (PMID:19299583) UniProtKB
RGD
PMID:19299583, PMID:26547053 RGD:13781893 NCBI chr 9:106,119,896...106,162,126
Ensembl chr 9:106,119,899...106,294,587
JBrowse link
G NCOA2 nuclear receptor coactivator 2 ISO (PMID:24529706) UniProtKB PMID:24529706 NCBI chr 4:64,888,029...65,245,757
Ensembl chr 4:64,954,120...65,246,572
JBrowse link
G NDUFA9 NADH:ubiquinone oxidoreductase subunit A9 IEA Ensembl GO_REF:0000107 NCBI chr 5:65,760,078...65,788,703
Ensembl chr 5:65,759,160...65,788,646
JBrowse link
G NFIL3 nuclear factor, interleukin 3 regulated IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:2,588,887...2,603,774
Ensembl chr14:2,588,891...2,603,255
JBrowse link
G NGF nerve growth factor ISO (PMID:23785138) UniProtKB PMID:23785138 NCBI chr 4:105,256,691...105,307,843
Ensembl chr 4:105,256,417...105,307,842
JBrowse link
G NGFR nerve growth factor receptor ISO (PMID:23785138) UniProtKB PMID:23785138 NCBI chr12:25,699,410...25,720,355
Ensembl chr12:25,699,427...25,720,357
JBrowse link
G NKX2-1 NK2 homeobox 1 ISO PMID:22356123 UniProt PMID:22356123 RGD:8661632 NCBI chr 7:63,487,200...63,491,580
Ensembl chr 7:63,487,807...63,491,575
JBrowse link
G NOCT nocturnin ISO (PMID:20685873), (PMID:22073225) UniProtKB PMID:20685873, PMID:22073225 NCBI chr 8:87,885,411...87,909,231
Ensembl chr 8:87,885,412...87,909,655
JBrowse link
G NOS2 nitric oxide synthase 2 IEA Ensembl GO_REF:0000107 NCBI chr12:44,174,944...44,219,875
Ensembl chr12:44,174,944...44,327,111
JBrowse link
G NPAS2 neuronal PAS domain protein 2 ISO (PMID:14645221) UniProtKB PMID:14645221 NCBI chr 3:53,298,805...53,490,375
Ensembl chr 3:53,298,863...53,438,910
JBrowse link
G NR0B2 nuclear receptor subfamily 0 group B member 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:84,225,670...84,228,156
Ensembl chr 6:84,225,694...84,228,094
JBrowse link
G NR1D1 nuclear receptor subfamily 1 group D member 1 ISO (MGI:MGI:2183702|PMID:12150932)
(PMID:14645221)
MGI
RGD
UniProtKB
PMID:12150932, PMID:14645221, PMID:24144766 MGI:MGI:2183702, RGD:10448984 NCBI chr12:22,263,549...22,274,131
Ensembl chr12:22,263,657...22,271,643
JBrowse link
G NR3C1 nuclear receptor subfamily 3 group C member 1 ISO RGD PMID:16673181 RGD:4892105 NCBI chr 2:144,822,937...144,956,451
Ensembl chr 2:144,822,937...144,956,095
JBrowse link
G NRIP1 nuclear receptor interacting protein 1 ISO (PMID:21628546) UniProtKB PMID:21628546 NCBI chr13:179,822,731...179,916,226
Ensembl chr13:179,824,862...179,915,177
JBrowse link
G NRXN1 neurexin 1 ISO RGD PMID:22662246 RGD:13207344 NCBI chr 3:89,799,426...90,914,205
Ensembl chr 3:89,799,543...90,914,205
JBrowse link
G NTRK1 neurotrophic receptor tyrosine kinase 1 IEA Ensembl GO_REF:0000107 NCBI chr 4:93,219,509...93,237,944
Ensembl chr 4:93,219,516...93,237,930
JBrowse link
G NTRK2 neurotrophic receptor tyrosine kinase 2 IEA Ensembl GO_REF:0000107 NCBI chr10:30,030,050...30,429,938
Ensembl chr10:30,033,379...30,429,882
JBrowse link
G NTRK3 neurotrophic receptor tyrosine kinase 3 IEA Ensembl GO_REF:0000107 NCBI chr 1:191,535,262...191,941,675
Ensembl chr 1:191,535,300...191,925,353
JBrowse link
G PAX4 paired box 4 ISO RGD PMID:19012751 RGD:2311636 NCBI chr18:20,675,874...20,680,315
Ensembl chr18:20,673,167...20,680,287
JBrowse link
G PDIA3 protein disulfide isomerase family A member 3 ISO RGD PMID:16375900 RGD:9999182 NCBI chr 1:127,786,174...127,814,096
Ensembl chr 1:127,785,772...127,814,196
JBrowse link
G PER1 period circadian regulator 1 ISO (PMID:14645221)
PMID:15094047
(PMID:14645221), (PMID:15038852), (PMID:19740747), (PMID:20106950), (PMID:23133559), (PMID:23443664), (PMID:23785138)
RGD
UniProtKB
UniProt
PMID:11122332, PMID:12176169, PMID:14645221, PMID:15038852, PMID:15094047, PMID:19740747, PMID:20106950, PMID:23133559, PMID:23443664, PMID:23785138 RGD:1299576, RGD:631234, RGD:8554359 NCBI chr12:53,361,863...53,376,723
Ensembl chr12:53,361,868...53,376,611
JBrowse link
G PER2 period circadian regulator 2 ISO PMID:15094047
(MGI:MGI:2667759|PMID:12843397)
(PMID:14645221), (PMID:19217292), (PMID:19740747), (PMID:23785138)
UniProt
MGI
RGD
UniProtKB
PMID:9765215, PMID:9878515, PMID:12843397, PMID:14645221, PMID:15094047, PMID:19217292, PMID:19740747, PMID:23785138 MGI:MGI:2667759, RGD:10043346, RGD:61691, RGD:8554359 NCBI chr15:137,793,419...137,837,854
Ensembl chr15:137,793,419...137,837,236
JBrowse link
G PER3 period circadian regulator 3 ISO (MGI:MGI:2667759|PMID:12843397) MGI PMID:12843397 MGI:MGI:2667759 NCBI chr 6:68,487,634...68,548,718 JBrowse link
G PHLPP1 PH domain and leucine rich repeat protein phosphatase 1 ISO RGD PMID:10570941 RGD:633914 NCBI chr 1:158,642,810...158,863,643
Ensembl chr 1:158,642,813...158,862,706
JBrowse link
G PRF1 perforin 1 ISO RGD PMID:16309885 RGD:1599931 NCBI chr14:73,515,306...73,520,256
Ensembl chr14:73,512,769...73,520,202
JBrowse link
G PRKG2 protein kinase cGMP-dependent 2 ISO (MGI:MGI:3630244|PMID:12725729) MGI PMID:12725729 MGI:MGI:3630244 NCBI chr 8:136,754,698...136,854,589
Ensembl chr 8:136,755,469...136,852,906
JBrowse link
G PRL prolactin ISO RGD PMID:17726143 RGD:1642564 NCBI chr 7:17,451,367...17,463,771
Ensembl chr 7:17,451,367...17,463,741
JBrowse link
G PROK1 prokineticin 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:109,688,989...109,693,705
Ensembl chr 4:109,688,989...109,693,705
JBrowse link
G PROK2 prokineticin 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:53,169,040...53,184,695
Ensembl chr13:53,169,437...53,185,115
JBrowse link
G PROKR2 prokineticin receptor 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:14,243,738...14,257,346
Ensembl chr17:14,242,514...14,257,307
JBrowse link
G PROX1 prospero homeobox 1 IEA Ensembl GO_REF:0000107 NCBI chr 9:129,527,704...129,583,693
Ensembl chr 9:129,532,164...129,580,979
JBrowse link
G RBM4B RNA binding motif protein 4B ISS UniProt GO_REF:0000024 NCBI chr 2:5,745,364...5,758,177 JBrowse link
G RORA RAR related orphan receptor A ISO RGD PMID:15781226 RGD:2325957 NCBI chr 1:110,719,004...111,482,807
Ensembl chr 1:110,719,190...111,477,703
JBrowse link
G RORB RAR related orphan receptor B ISO RGD PMID:15781226, PMID:18321474 RGD:2301031, RGD:2325957 NCBI chr 1:227,573,972...227,776,806
Ensembl chr 1:227,574,647...227,772,693
JBrowse link
G RORC RAR related orphan receptor C ISO RGD PMID:15781226 RGD:2325957 NCBI chr 4:97,374,672...97,399,017
Ensembl chr 4:97,375,136...97,400,231
JBrowse link
G RPE65 retinoid isomerohydrolase RPE65 ISO RGD PMID:12742352 RGD:9585648 NCBI chr 6:144,206,078...144,229,471
Ensembl chr 6:144,206,077...144,293,709
JBrowse link
G SETX senataxin IEA Ensembl GO_REF:0000107 NCBI chr 1:272,093,449...272,170,857
Ensembl chr 1:272,095,358...272,170,750
JBrowse link
G SFTPA1 surfactant protein A1 ISO RGD PMID:12872443 RGD:4143473 NCBI chr14:82,091,178...82,095,393
Ensembl chr14:82,091,178...82,107,675
JBrowse link
G SFTPB surfactant protein B ISO RGD PMID:12872443 RGD:4143473 NCBI chr 3:59,101,940...59,113,442
Ensembl chr 3:59,101,952...59,111,834
JBrowse link
G SFTPC surfactant protein C ISO RGD PMID:12872443 RGD:4143473 NCBI chr14:6,440,309...6,443,104
Ensembl chr14:6,440,309...6,443,095
JBrowse link
G SIRT1 sirtuin 1 ISO (PMID:18662546) UniProtKB PMID:18662546 NCBI chr14:71,091,167...71,126,351
Ensembl chr14:71,091,157...71,123,299
JBrowse link
G SLC4A1 solute carrier family 4 member 1 ISO RGD PMID:21903759 RGD:10450532 NCBI chr12:18,957,813...18,975,266
Ensembl chr12:18,957,805...18,974,216
JBrowse link
G SLC6A4 solute carrier family 6 member 4 ISO RGD PMID:18482738 RGD:4889508 NCBI chr12:46,285,995...46,328,377
Ensembl chr12:46,285,997...46,314,378
JBrowse link
G SLC9A3 solute carrier family 9 member A3 ISO RGD PMID:15780093 RGD:1581376 NCBI chr16:79,625,555...79,704,084
Ensembl chr16:79,625,262...79,704,082
JBrowse link
G SREBF1 sterol regulatory element binding transcription factor 1 IEA Ensembl GO_REF:0000107 NCBI chr12:60,733,967...60,750,951
Ensembl chr12:60,733,907...60,751,265
JBrowse link
G STAR steroidogenic acute regulatory protein ISO RGD PMID:19190255 RGD:4145635 NCBI chr15:48,377,597...48,385,398
Ensembl chr15:48,347,864...48,385,464
JBrowse link
G SYNCRIP synaptotagmin binding cytoplasmic RNA interacting protein ISO RGD PMID:15798208 RGD:9854643 NCBI chr 1:54,563,112...54,598,408
Ensembl chr 1:54,563,113...54,598,407
JBrowse link
G THRAP3 thyroid hormone receptor associated protein 3 IEA Ensembl GO_REF:0000107 NCBI chr 6:92,350,021...92,412,335
Ensembl chr 6:92,350,073...92,412,330
JBrowse link
G TIMELESS timeless circadian regulator IEA Ensembl GO_REF:0000107 Ensembl chr 5:21,759,474...21,787,521 JBrowse link
G TNF tumor necrosis factor ISO RGD PMID:9483199 RGD:11552588 NCBI chr 7:23,699,635...23,702,393
Ensembl chr 7:23,699,636...23,703,655
JBrowse link
G TOP1 DNA topoisomerase I ISO (PMID:22904072) UniProtKB PMID:22904072 NCBI chr17:43,710,270...43,799,700
Ensembl chr17:43,710,290...43,799,700
JBrowse link
G TP53 tumor protein p53 ISO (PMID:24051492) UniProtKB PMID:24051492 NCBI chr12:52,939,643...52,953,786
Ensembl chr12:52,939,643...52,953,819
JBrowse link
G TPH1 tryptophan hydroxylase 1 ISO RGD PMID:18705647 RGD:5686363 NCBI chr 2:41,075,623...41,109,005
Ensembl chr 2:41,028,692...41,108,928
JBrowse link
G TPH2 tryptophan hydroxylase 2 ISO RGD PMID:15194882 RGD:2317079 NCBI chr 5:35,917,159...36,016,981
Ensembl chr 5:35,918,569...36,017,514
JBrowse link
G TYMS thymidylate synthetase ISO RGD PMID:19628084 RGD:5133425 NCBI chr 6:105,642,730...105,660,279
Ensembl chr 6:105,640,031...105,660,601
JBrowse link
circadian sleep/wake cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AHCY adenosylhomocysteinase ISO RGD PMID:8330191 RGD:1598901 NCBI chr17:37,726,084...37,744,378
Ensembl chr17:37,726,077...37,744,461
JBrowse link
G NPAS2 neuronal PAS domain protein 2 ISO (MGI:MGI:2667759|PMID:12843397) MGI PMID:12843397 MGI:MGI:2667759 NCBI chr 3:53,298,805...53,490,375
Ensembl chr 3:53,298,863...53,438,910
JBrowse link
G TH tyrosine hydroxylase ISO RGD PMID:20980612 RGD:5128829 NCBI chr 2:1,499,628...1,506,180
Ensembl chr 2:1,499,618...1,506,615
JBrowse link
circadian sleep/wake cycle process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HCRTR2 hypocretin receptor 2 IEA InterPro GO_REF:0000002 NCBI chr 7:25,830,544...25,929,640
Ensembl chr 7:25,826,294...25,929,702
JBrowse link
circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BTBD9 BTB domain containing 9 IEA Ensembl GO_REF:0000107 NCBI chr 7:33,723,077...34,122,673
Ensembl chr 7:33,720,013...34,122,662
JBrowse link
G GHRH growth hormone releasing hormone ISO RGD PMID:17537840 RGD:2289986 NCBI chr17:40,386,725...40,398,312
Ensembl chr17:40,387,344...40,397,857
JBrowse link
circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CST3 cystatin C ISO RGD PMID:17027151 RGD:2306498 NCBI chr17:30,471,056...30,474,486
Ensembl chr17:30,470,855...30,474,590
JBrowse link
G GABRB3 gamma-aminobutyric acid type A receptor subunit beta3 ISO (MGI:MGI:2445919|PMID:12419540) MGI PMID:12419540 MGI:MGI:2445919 NCBI chr 1:140,566,443...140,906,516
Ensembl chr 1:140,566,287...140,905,658
JBrowse link
G PRKACA protein kinase cAMP-activated catalytic subunit alpha ISO RGD PMID:20844122 RGD:13515123 NCBI chr 2:65,074,876...65,095,564
Ensembl chr 2:65,074,870...65,095,553
JBrowse link
G SRD5A1 steroid 5 alpha-reductase 1 ISO deprivation RGD PMID:12597996 RGD:4891963 NCBI chr16:75,309,830...75,335,438 JBrowse link
G STAR steroidogenic acute regulatory protein ISO deprivation RGD PMID:12597996 RGD:4891963 NCBI chr15:48,377,597...48,385,398
Ensembl chr15:48,347,864...48,385,464
JBrowse link
circadian temperature homeostasis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EGR1 early growth response 1 IEA Ensembl GO_REF:0000107 NCBI chr 2:140,440,829...140,445,302
Ensembl chr 2:140,441,421...140,445,296
JBrowse link
G NR1D1 nuclear receptor subfamily 1 group D member 1 IEA Ensembl GO_REF:0000107 NCBI chr12:22,263,549...22,274,131
Ensembl chr12:22,263,657...22,271,643
JBrowse link
G TNFRSF11A TNF receptor superfamily member 11a IEA Ensembl GO_REF:0000107 NCBI chr 1:159,128,039...159,187,476
Ensembl chr 1:159,128,038...159,187,481
JBrowse link
entrainment of circadian clock term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATOH7 atonal bHLH transcription factor 7 ISO (MGI:MGI:2445865|PMID:12451142) MGI PMID:12451142 MGI:MGI:2445865 NCBI chr14:71,398,939...71,402,479
Ensembl chr14:71,400,980...71,401,447
JBrowse link
G CHRM1 cholinergic receptor muscarinic 1 IMP (PMID:12196552) AgBase PMID:12196552 NCBI chr 2:8,858,765...8,872,042 JBrowse link
G CLOCK clock circadian regulator ISO RGD PMID:10095082 RGD:632379 NCBI chr 8:54,793,323...54,910,192
Ensembl chr 8:54,788,864...54,910,146
JBrowse link
G GNA11 G protein subunit alpha 11 ISS AgBase GO_REF:0000024 NCBI chr 2:75,439,405...75,456,855
Ensembl chr 2:75,437,201...75,457,092
JBrowse link
G GNAQ G protein subunit alpha q ISS AgBase GO_REF:0000024 NCBI chr 1:230,607,469...230,906,988
Ensembl chr 1:230,605,229...230,907,675
JBrowse link
G ID2 inhibitor of DNA binding 2 ISO (MGI:MGI:3838062|PMID:19217292) MGI PMID:19217292 MGI:MGI:3838062 NCBI chr 3:127,500,759...127,503,207
Ensembl chr 3:127,500,759...127,503,257
JBrowse link
G PHLPP1 PH domain and leucine rich repeat protein phosphatase 1 IEA Ensembl GO_REF:0000107 NCBI chr 1:158,642,810...158,863,643
Ensembl chr 1:158,642,813...158,862,706
JBrowse link
G SOX14 SRY-box transcription factor 14 IEA Ensembl GO_REF:0000107 NCBI chr13:78,620,818...78,621,702
Ensembl chr13:78,620,984...78,622,577
JBrowse link
entrainment of circadian clock by photoperiod term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATOH7 atonal bHLH transcription factor 7 ISO (MGI:MGI:5699646|PMID:26392540) UniProt PMID:26392540 MGI:MGI:5699646 NCBI chr14:71,398,939...71,402,479
Ensembl chr14:71,400,980...71,401,447
JBrowse link
G BHLHE40 basic helix-loop-helix family member e40 IEA Ensembl GO_REF:0000107 NCBI chr13:61,526,121...61,533,686
Ensembl chr13:61,526,197...61,533,686
JBrowse link
G CRTC1 CREB regulated transcription coactivator 1 IEA Ensembl GO_REF:0000107 NCBI chr 2:59,069,334...59,157,196
Ensembl chr 2:59,069,334...59,157,187
JBrowse link
G CRY1 cryptochrome circadian regulator 1 IEA Ensembl GO_REF:0000107 NCBI chr 5:13,275,265...13,429,566
Ensembl chr 5:13,275,544...13,364,594
JBrowse link
G CRY2 cryptochrome circadian regulator 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:16,587,101...16,620,380
Ensembl chr 2:16,585,966...16,620,405
JBrowse link
G FBXL12 F-box and leucine rich repeat protein 12 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:68,692,994...68,701,917
Ensembl chr 2:68,692,994...68,706,144
JBrowse link
G FBXL17 F-box and leucine rich repeat protein 17 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:112,989,134...113,480,564
Ensembl chr 2:112,989,145...113,480,210
JBrowse link
G FBXL21P F-box and leucine rich repeat protein 21, pseudogene IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:138,097,009...138,108,284 JBrowse link
G FBXL22 F-box and leucine rich repeat protein 22 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:108,408,227...108,411,937 JBrowse link
G FBXL3 F-box and leucine rich repeat protein 3 IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr11:49,131,663...49,151,380
Ensembl chr11:49,130,182...49,151,009
JBrowse link
G FBXL6 F-box and leucine rich repeat protein 6 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:424,433...427,799
Ensembl chr 4:423,407...427,801
JBrowse link
G FBXL8 F-box and leucine rich repeat protein 8 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:27,803,581...27,813,404 JBrowse link
G ID2 inhibitor of DNA binding 2 ISS UniProt GO_REF:0000024 NCBI chr 3:127,500,759...127,503,207
Ensembl chr 3:127,500,759...127,503,257
JBrowse link
G MTA1 metastasis associated 1 ISO (MGI:MGI:5582861|PMID:24089055) UniProtKB PMID:24089055 MGI:MGI:5582861
G NR2F6 nuclear receptor subfamily 2 group F member 6 IEA Ensembl GO_REF:0000107 NCBI chr 2:60,426,116...60,438,178
Ensembl chr 2:60,426,618...60,438,177
JBrowse link
G OPN4 opsin 4 ISO (MGI:MGI:5925970|PMID:26320947) MGI PMID:26320947 MGI:MGI:5925970 NCBI chr14:87,645,563...87,660,820
Ensembl chr14:87,644,240...87,722,245
JBrowse link
G OPN5 opsin 5 IEA Ensembl GO_REF:0000107 NCBI chr 7:42,476,125...42,507,181
Ensembl chr 7:42,476,125...42,527,121
JBrowse link
G PDE6B phosphodiesterase 6B IEA Ensembl GO_REF:0000107 NCBI chr 8:80,378...111,960
Ensembl chr 8:80,378...110,369
JBrowse link
G PER1 period circadian regulator 1 IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr12:53,361,863...53,376,723
Ensembl chr12:53,361,868...53,376,611
JBrowse link
G PER2 period circadian regulator 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:137,793,419...137,837,854
Ensembl chr15:137,793,419...137,837,236
JBrowse link
G PER3 period circadian regulator 3 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:68,487,634...68,548,718 JBrowse link
G PML PML nuclear body scaffold IEA Ensembl GO_REF:0000107 NCBI chr 7:59,405,044...59,450,155
Ensembl chr 7:59,405,048...59,450,150
JBrowse link
G PPP1CA protein phosphatase 1 catalytic subunit alpha IEA Ensembl GO_REF:0000107 NCBI chr 2:5,120,202...5,123,168
Ensembl chr 2:5,120,140...5,126,953
JBrowse link
G PPP1CB protein phosphatase 1 catalytic subunit beta ISS
IEA
UniProt
Ensembl
GO_REF:0000024, GO_REF:0000107 NCBI chr 3:110,437,681...110,474,896
Ensembl chr 3:110,437,687...110,474,891
JBrowse link
G PPP1CC protein phosphatase 1 catalytic subunit gamma IEA Ensembl GO_REF:0000107 NCBI chr14:32,071,472...32,091,267
Ensembl chr14:32,070,544...32,091,499
JBrowse link
G RBM4 RNA binding motif protein 4 ISO (MGI:MGI:3703208|PMID:17264215) UniProtKB PMID:17264215 MGI:MGI:3703208 NCBI chr 2:5,776,535...5,784,337
Ensembl chr 2:5,759,062...5,800,832
JBrowse link
G RBM4B RNA binding motif protein 4B ISS UniProt GO_REF:0000024 NCBI chr 2:5,745,364...5,758,177 JBrowse link
G SIK1 salt inducible kinase 1 IEA Ensembl GO_REF:0000107 NCBI chr13:206,454,695...206,465,802 JBrowse link
G TP53 tumor protein p53 ISS
IEA
UniProt
Ensembl
GO_REF:0000024, GO_REF:0000107 NCBI chr12:52,939,643...52,953,786
Ensembl chr12:52,939,643...52,953,819
JBrowse link
G USP2 ubiquitin specific peptidase 2 IEA Ensembl GO_REF:0000107 NCBI chr 9:46,563,469...46,590,392
Ensembl chr 9:46,563,480...46,590,265
JBrowse link
estrous cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADNP activity dependent neuroprotector homeobox ISO RGD PMID:16023261 RGD:2312777 NCBI chr17:52,316,388...52,350,732
Ensembl chr17:52,317,669...52,350,757
JBrowse link
G ADRB2 adrenoceptor beta 2 ISO RGD PMID:7977723 RGD:8548523 NCBI chr 2:150,032,649...150,035,591
Ensembl chr 2:150,032,782...150,035,591
JBrowse link
G ALDH1A1 aldehyde dehydrogenase 1 family member A1 ISO RGD PMID:18202528 RGD:2306318 NCBI chr 1:226,163,347...226,217,342
Ensembl chr 1:226,161,296...226,217,312
JBrowse link
G ANXA1 annexin A1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:226,414,200...226,431,963
Ensembl chr 1:226,414,307...226,432,287
JBrowse link
G AZIN1 antizyme inhibitor 1 ISO RGD PMID:28315656 RGD:14700804 NCBI chr 4:34,221,368...34,257,261
Ensembl chr 4:34,209,008...34,257,136
JBrowse link
G CCKBR cholecystokinin B receptor ISO RGD PMID:17045752 RGD:2311331 NCBI chr 9:3,409,222...3,419,513 JBrowse link
G CLU clusterin ISO RGD PMID:11149574 RGD:9068389 NCBI chr14:11,336,585...11,352,569
Ensembl chr14:11,336,590...11,352,475
JBrowse link
G EGR1 early growth response 1 IEA Ensembl GO_REF:0000107 NCBI chr 2:140,440,829...140,445,302
Ensembl chr 2:140,441,421...140,445,296
JBrowse link
G ENPP2 ectonucleotide pyrophosphatase/phosphodiesterase 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:19,319,815...19,433,492
Ensembl chr 4:19,180,234...19,433,492
JBrowse link
G ERBB2 erb-b2 receptor tyrosine kinase 2 ISO RGD PMID:11956173 RGD:2290010 NCBI chr12:22,591,621...22,621,384
Ensembl chr12:22,590,725...22,621,351
JBrowse link
G ESR2 estrogen receptor 2 ISO RGD PMID:11854469 RGD:8694160 NCBI chr 1:193,823,666...193,907,330
Ensembl chr 1:193,722,164...193,906,565
JBrowse link
G ETS1 ETS proto-oncogene 1, transcription factor ISO RGD PMID:18439600 RGD:2313729 NCBI chr 9:55,377,264...55,512,180
Ensembl chr 9:55,377,264...55,512,115
JBrowse link
G GNRH1 gonadotropin releasing hormone 1 ISO RGD PMID:9075691 RGD:9685070 NCBI chr14:9,442,971...9,447,521
Ensembl chr14:9,442,971...9,447,521
JBrowse link
G HAS1 hyaluronan synthase 1 ISO RGD PMID:24218629 RGD:9588635 NCBI chr 6:58,303,274...58,313,486
Ensembl chr 6:58,307,029...58,313,486
JBrowse link
G HSPA8 heat shock protein family A (Hsp70) member 8 ISO RGD PMID:9990085 RGD:10059328 NCBI chr 9:49,982,278...49,986,760
Ensembl chr 9:49,982,284...49,990,508
JBrowse link
G IGF1R insulin like growth factor 1 receptor ISO RGD PMID:17567960 RGD:10046043 NCBI chr 1:137,383,623...137,691,038
Ensembl chr 1:137,387,925...137,690,666
JBrowse link
G LOC100625479 cytochrome P450 1B1 ISO RGD PMID:12223220 RGD:7829740 NCBI chr 3:102,195,743...102,205,687
Ensembl chr 3:102,195,741...102,206,750
JBrowse link
G MDK midkine IEA Ensembl GO_REF:0000107 NCBI chr 2:16,130,787...16,133,791
Ensembl chr 2:16,130,782...16,133,510
JBrowse link
G MMP13 matrix metallopeptidase 13 ISO RGD PMID:8691099 RGD:10043158 NCBI chr 9:33,549,003...33,616,700
Ensembl chr 9:33,549,003...33,568,076
JBrowse link
G MMP7 matrix metallopeptidase 7 ISO RGD PMID:10070364 RGD:9685349 NCBI chr 9:33,214,590...33,225,080
Ensembl chr 9:33,214,594...33,225,080
JBrowse link
G MUC4 mucin 4, cell surface associated ISO RGD PMID:9618151 RGD:2303752 NCBI chr13:134,192,412...134,248,435 JBrowse link
G NCOA1 nuclear receptor coactivator 1 ISO RGD PMID:15862975 RGD:2306462 NCBI chr 3:113,997,214...114,251,080
Ensembl chr 3:113,997,236...114,251,078
JBrowse link
G NCOR2 nuclear receptor corepressor 2 ISO RGD PMID:15862975 RGD:2306462 NCBI chr14:28,642,774...28,819,404
Ensembl chr14:28,624,702...28,819,404
JBrowse link
G OPRK1 opioid receptor kappa 1 ISO RGD PMID:21041644 RGD:9831449 NCBI chr 4:77,399,298...77,429,025
Ensembl chr 4:77,399,198...77,426,522
JBrowse link
G OPRL1 opioid related nociceptin receptor 1 ISO RGD PMID:12710984 RGD:9835032 NCBI chr17:62,905,700...62,913,018
Ensembl chr17:62,897,727...62,913,754
JBrowse link
G OPRM1 opioid receptor mu 1 ISO RGD PMID:21041644 RGD:9831449 NCBI chr 1:12,634,125...12,702,295
Ensembl chr 1:12,528,672...12,702,443
JBrowse link
G OXTR oxytocin receptor ISO RGD PMID:12867731 RGD:2304182 NCBI chr13:65,134,055...65,155,543
Ensembl chr13:65,134,057...65,153,489
JBrowse link
G PCNA proliferating cell nuclear antigen ISO RGD PMID:10856886 RGD:10448987 NCBI chr17:14,137,746...14,142,584
Ensembl chr17:14,125,814...14,185,276
JBrowse link
G PGR progesterone receptor ISO RGD PMID:16461543 RGD:7248717 NCBI chr 9:32,035,684...32,129,776
Ensembl chr 9:32,035,684...32,129,221
JBrowse link
G PTN pleiotrophin ISS
IEA
UniProt
Ensembl
GO_REF:0000024, GO_REF:0000107 NCBI chr18:12,219,708...12,309,045
Ensembl chr18:12,219,790...12,311,922
JBrowse link
G SHAS2 hyaluronan synthase 2 ISO RGD PMID:24218629 RGD:9588635 NCBI chr 4:17,583,154...17,613,524
Ensembl chr 4:17,596,472...17,675,586
JBrowse link
G TRPM2 transient receptor potential cation channel subfamily M member 2 ISO RGD PMID:24577155 RGD:9999435 NCBI chr13:207,212,339...207,263,313
Ensembl chr13:207,211,952...207,264,982
JBrowse link
G WNT5A Wnt family member 5A ISO RGD PMID:20126574 RGD:2326233 NCBI chr13:37,344,684...37,367,215
Ensembl chr13:37,344,699...37,367,207
JBrowse link
follicle-stimulating hormone signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADRM1 adhesion regulating molecule 1 ISO (MGI:MGI:4849324|PMID:21048919) BHF-UCL PMID:21048919 MGI:MGI:4849324 NCBI chr17:61,692,923...61,698,138
Ensembl chr17:61,692,945...61,698,146
JBrowse link
G ARRB1 arrestin beta 1 ISO RGD PMID:16899567 RGD:4140424 NCBI chr 9:9,516,944...9,597,446
Ensembl chr 9:9,513,856...9,597,959
JBrowse link
G ARRB2 arrestin beta 2 ISO RGD PMID:16899567 RGD:4140424 NCBI chr12:52,161,776...52,170,362
Ensembl chr12:52,161,776...52,170,344
JBrowse link
G CENPI centromere protein I ISO RGD PMID:7758824 RGD:728588 NCBI chr  X:82,776,375...82,826,651
Ensembl chr  X:82,776,443...82,828,410
JBrowse link
G FSHB follicle stimulating hormone subunit beta IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:30,395,769...30,399,282
Ensembl chr 2:30,395,018...30,399,274
JBrowse link
G FSHR follicle stimulating hormone receptor ISS
IBA
IEA
(PMID:21873635) UniProt
GO_Central
GOC
PMID:21873635 GO_REF:0000024, GO_REF:0000108 NCBI chr 3:91,607,236...91,775,255
Ensembl chr 3:91,607,305...91,774,683
JBrowse link
G GRK2 G protein-coupled receptor kinase 2 ISO RGD PMID:16899567 RGD:4140424 NCBI chr 2:5,209,435...5,227,543
Ensembl chr 2:5,209,436...5,227,748
JBrowse link
G MYH9 myosin heavy chain 9 ISO RGD PMID:20068007 RGD:6902910 NCBI chr 5:11,365,603...11,456,475 JBrowse link
generation of ovulation cycle rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHRNA7 cholinergic receptor nicotinic alpha 7 subunit IEA Ensembl GO_REF:0000107 NCBI chr 1:142,803,697...142,937,124
Ensembl chr 1:142,803,698...142,937,788
JBrowse link
G KISS1 KiSS-1 metastasis suppressor ISO RGD PMID:15976058 RGD:2292152 NCBI chr 9:64,834,822...64,841,071
Ensembl chr 9:64,834,820...64,853,610
JBrowse link
G NPY5R neuropeptide Y receptor Y5 ISO RGD PMID:12047724 RGD:1625504 NCBI chr 8:52,173,906...52,183,336
Ensembl chr 8:52,174,299...52,183,334
JBrowse link
initiation of primordial ovarian follicle growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXO3 forkhead box O3 IEA Ensembl GO_REF:0000107 NCBI chr 1:74,626,673...74,760,323
Ensembl chr 1:74,628,217...74,760,328
JBrowse link
G GAS2 growth arrest specific 2 IEA Ensembl GO_REF:0000107 NCBI chr 2:36,712,758...36,885,436
Ensembl chr 2:36,711,609...36,885,620
JBrowse link
locomotor rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANKFN1 ankyrin repeat and fibronectin type III domain containing 1 ISO (MGI:MGI:5642309|PMID:26131556) MGI PMID:26131556 MGI:MGI:5642309 NCBI chr12:32,479,469...32,823,527
Ensembl chr12:32,386,769...32,821,340
JBrowse link
G CIART circadian associated repressor of transcription IEA Ensembl GO_REF:0000107 NCBI chr 4:98,800,849...98,809,573
Ensembl chr 4:98,800,930...98,814,553
JBrowse link
G EGR1 early growth response 1 IEA Ensembl GO_REF:0000107 NCBI chr 2:140,440,829...140,445,302
Ensembl chr 2:140,441,421...140,445,296
JBrowse link
G ID2 inhibitor of DNA binding 2 ISS UniProt GO_REF:0000024 NCBI chr 3:127,500,759...127,503,207
Ensembl chr 3:127,500,759...127,503,257
JBrowse link
G KCND2 potassium voltage-gated channel subfamily D member 2 ISO (MGI:MGI:5432624|PMID:22815518) UniProtKB PMID:22815518 MGI:MGI:5432624 NCBI chr18:26,139,457...26,624,210
Ensembl chr18:26,141,506...26,623,034
JBrowse link
G KCNMA1 potassium calcium-activated channel subfamily M alpha 1 ISO (MGI:MGI:3654773|PMID:16845385) MGI PMID:16845385 MGI:MGI:3654773 NCBI chr14:79,345,382...80,106,337
Ensembl chr14:79,352,396...80,106,258
JBrowse link
G MAPK10 mitogen-activated protein kinase 10 ISO (MGI:MGI:5431019|PMID:22441692) UniProt PMID:22441692 MGI:MGI:5431019 NCBI chr 8:132,445,818...132,751,575
Ensembl chr 8:132,249,635...132,776,820
JBrowse link
G MC3R melanocortin 3 receptor IEA Ensembl GO_REF:0000107 NCBI chr17:56,868,525...56,869,605
Ensembl chr17:56,868,525...56,869,605
JBrowse link
G MTA1 metastasis associated 1 ISO (MGI:MGI:5582861|PMID:24089055) UniProtKB PMID:24089055 MGI:MGI:5582861
G NAGLU N-acetyl-alpha-glucosaminidase IEA Ensembl GO_REF:0000107 Ensembl chr12:20,269,930...20,279,582 JBrowse link
G NCOA2 nuclear receptor coactivator 2 IEA Ensembl GO_REF:0000107 NCBI chr 4:64,888,029...65,245,757
Ensembl chr 4:64,954,120...65,246,572
JBrowse link
G NCOR1 nuclear receptor corepressor 1 ISO (MGI:MGI:3821398|PMID:19037247) UniProt PMID:19037247 MGI:MGI:3821398 NCBI chr12:59,256,868...59,392,564 JBrowse link
G NMS neuromedin S ISO PMID:15635449 MGI PMID:15635449 RGD:1359746 NCBI chr 3:53,747,549...53,763,396 JBrowse link
G NPAS2 neuronal PAS domain protein 2 ISO (MGI:MGI:2667759|PMID:12843397) MGI PMID:12843397 MGI:MGI:2667759 NCBI chr 3:53,298,805...53,490,375
Ensembl chr 3:53,298,863...53,438,910
JBrowse link
G PTEN phosphatase and tensin homolog ISO (MGI:MGI:3759727|PMID:17706614) BHF-UCL PMID:17706614 MGI:MGI:3759727 NCBI chr14:99,929,590...100,021,619 JBrowse link
G USP2 ubiquitin specific peptidase 2 IEA Ensembl GO_REF:0000107 NCBI chr 9:46,563,469...46,590,392
Ensembl chr 9:46,563,480...46,590,265
JBrowse link
luteinization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G A2M alpha-2-macroglobulin ISO RGD PMID:2479532 RGD:10046034 NCBI chr 5:62,406,928...62,483,690
Ensembl chr 5:62,438,017...62,485,537
JBrowse link
G CAPN5 calpain 5 ISO RGD PMID:19415717 RGD:2313170 NCBI chr 9:11,194,302...11,246,713
Ensembl chr 9:11,207,835...11,246,711
JBrowse link
G CYP19A2 cytochrome P450 19A2 ISO RGD PMID:23183184 RGD:7257725 NCBI chr 1:120,652,172...120,695,899
Ensembl chr 1:120,367,667...120,695,899
JBrowse link
G FZD4 frizzled class receptor 4 ISO (MGI:MGI:3692134|PMID:16093361) MGI PMID:16093361 MGI:MGI:3692134 NCBI chr 9:20,714,995...20,721,460
Ensembl chr 9:20,294,885...20,721,766
JBrowse link
G MMP1 matrix metallopeptidase 1 ISO RGD PMID:8835383 RGD:7207087 NCBI chr 9:33,411,738...33,420,205
Ensembl chr 9:33,411,065...33,454,000
JBrowse link
G MMP2 matrix metallopeptidase 2 ISO RGD PMID:10537164 RGD:7207086 NCBI chr 6:30,059,247...30,087,031
Ensembl chr 6:30,058,594...30,086,982
JBrowse link
G NR5A1 nuclear receptor subfamily 5 group A member 1 IEA Ensembl GO_REF:0000107 NCBI chr 1:265,284,491...265,311,547
Ensembl chr 1:265,284,493...265,311,417
JBrowse link
G PDGFRA platelet derived growth factor receptor alpha IEA Ensembl GO_REF:0000107 NCBI chr 8:40,966,568...41,021,440
Ensembl chr 8:40,967,493...41,021,442
JBrowse link
G PGR progesterone receptor ISO RGD PMID:8344215 RGD:1601291 NCBI chr 9:32,035,684...32,129,776
Ensembl chr 9:32,035,684...32,129,221
JBrowse link
G PLEKHA1 pleckstrin homology domain containing A1 IEA Ensembl GO_REF:0000107 NCBI chr14:131,960,932...132,016,664
Ensembl chr14:131,946,792...132,016,660
JBrowse link
G PTPRN protein tyrosine phosphatase receptor type N ISO (MGI:MGI:3769282|PMID:16269463) UniProtKB PMID:16269463 MGI:MGI:3769282 NCBI chr15:121,329,284...121,349,228
Ensembl chr15:121,329,288...121,349,276
JBrowse link
G SGPL1 sphingosine-1-phosphate lyase 1 IEA Ensembl GO_REF:0000107 NCBI chr14:73,696,902...73,781,830
Ensembl chr14:73,723,800...73,781,830
JBrowse link
G STAT5A signal transducer and activator of transcription 5A ISS AgBase GO_REF:0000024 NCBI chr12:20,474,221...20,498,785
Ensembl chr12:20,474,225...20,499,138
JBrowse link
G STAT5B signal transducer and activator of transcription 5B ISS
IEA
AgBase
Ensembl
GO_REF:0000024, GO_REF:0000107 NCBI chr12:20,498,103...20,574,365
Ensembl chr12:20,508,403...20,574,288
JBrowse link
luteolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CASP2 caspase 2 ISO RGD PMID:16940287 RGD:4107077 NCBI chr18:6,946,432...6,966,088
Ensembl chr18:6,902,542...6,966,092
JBrowse link
G CASP3 caspase 3 ISO RGD PMID:25332219 RGD:13782179 NCBI chr15:45,744,320...45,753,252
Ensembl chr15:45,742,749...45,763,773
JBrowse link
G DDIT3 DNA damage inducible transcript 3 ISO RGD PMID:25332219 RGD:13782179 NCBI chr 5:22,785,441...22,789,867
Ensembl chr 5:22,785,441...22,791,134
JBrowse link
G HSPA5 heat shock protein family A (Hsp70) member 5 ISO RGD PMID:25332219 RGD:13782179 NCBI chr 1:265,930,044...265,934,959
Ensembl chr 1:265,930,045...265,934,904
JBrowse link
G MMP1 matrix metallopeptidase 1 ISO RGD PMID:8835383 RGD:7207087 NCBI chr 9:33,411,738...33,420,205
Ensembl chr 9:33,411,065...33,454,000
JBrowse link
G MMP13 matrix metallopeptidase 13 ISO RGD PMID:10537164 RGD:7207086 NCBI chr 9:33,549,003...33,616,700
Ensembl chr 9:33,549,003...33,568,076
JBrowse link
G MMP19 matrix metallopeptidase 19 ISO RGD PMID:15286033 RGD:1642024 NCBI chr 5:21,279,514...21,285,943
Ensembl chr 5:21,280,130...21,285,774
JBrowse link
G PLA2G4A phospholipase A2 group IVA ISO RGD PMID:11444430 RGD:1642472 NCBI chr 9:127,853,581...128,164,825
Ensembl chr 9:127,859,051...128,162,636
JBrowse link
negative regulation of circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CIPC CLOCK interacting pacemaker IEA InterPro GO_REF:0000002 NCBI chr 7:100,180,389...100,199,529
Ensembl chr 7:100,181,012...100,197,836
JBrowse link
G CRY1 cryptochrome circadian regulator 1 IEA Ensembl GO_REF:0000107 NCBI chr 5:13,275,265...13,429,566
Ensembl chr 5:13,275,544...13,364,594
JBrowse link
G CRY2 cryptochrome circadian regulator 2 IEA Ensembl GO_REF:0000107 NCBI chr 2:16,587,101...16,620,380
Ensembl chr 2:16,585,966...16,620,405
JBrowse link
G PER2 period circadian regulator 2 ISO (MGI:MGI:4410413|PMID:19605937) UniProtKB PMID:19605937 MGI:MGI:4410413 NCBI chr15:137,793,419...137,837,854
Ensembl chr15:137,793,419...137,837,236
JBrowse link
G PIWIL2 piwi like RNA-mediated gene silencing 2 IEA Ensembl GO_REF:0000107 NCBI chr14:6,560,402...6,632,524
Ensembl chr14:6,563,668...6,632,528
JBrowse link
G SFPQ splicing factor proline and glutamine rich IEA Ensembl GO_REF:0000107 NCBI chr 6:91,391,552...91,408,236
Ensembl chr 6:91,391,555...91,408,219
JBrowse link
G SIN3A SIN3 transcription regulator family member A IEA Ensembl GO_REF:0000107 NCBI chr 7:58,171,821...58,246,126
Ensembl chr 7:58,176,166...58,245,762
JBrowse link
G SUV39H1 suppressor of variegation 3-9 homolog 1 ISO (MGI:MGI:5569417|PMID:24413057) UniProtKB PMID:24413057 MGI:MGI:5569417 NCBI chr  X:42,797,309...42,811,457
Ensembl chr  X:42,797,828...42,814,003
JBrowse link
G SUV39H2 suppressor of variegation 3-9 homolog 2 ISO (MGI:MGI:5569417|PMID:24413057) UniProtKB PMID:24413057 MGI:MGI:5569417 NCBI chr10:46,874,606...46,900,058
Ensembl chr10:46,862,584...46,900,040
JBrowse link
negative regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase ISO RGD PMID:19066225 RGD:5128864 NCBI chr17:47,044,492...47,072,232
Ensembl chr17:47,044,495...47,072,245
JBrowse link
G ADORA1 adenosine A1 receptor ISO RGD PMID:19491711 RGD:2317916 NCBI chr 9:113,835,279...113,875,899
Ensembl chr 9:113,835,920...113,875,719
JBrowse link
negative regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GHRL ghrelin and obestatin prepropeptide IEA Ensembl GO_REF:0000107 NCBI chr13:66,442,106...66,453,576
Ensembl chr13:66,316,436...66,452,917
JBrowse link
G HTR7 5-hydroxytryptamine receptor 7 ISO RGD PMID:18466985 RGD:6480669 NCBI chr14:102,443,312...102,548,894
Ensembl chr14:102,444,566...102,548,931
JBrowse link
G PTGER4 prostaglandin E receptor 4 ISO RGD PMID:10923657 RGD:10043386 NCBI chr16:25,670,832...25,686,556
Ensembl chr16:25,670,862...25,686,552
JBrowse link
negative regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADORA1 adenosine A1 receptor ISO in the sleep-promoting area of the lateral preoptic area of the brain RGD PMID:16109808 RGD:1625234 NCBI chr 9:113,835,279...113,875,899
Ensembl chr 9:113,835,920...113,875,719
JBrowse link
G DRD1 dopamine receptor D1 ISO RGD PMID:12944496 RGD:1581422 NCBI chr16:49,189,555...49,193,722
Ensembl chr16:49,188,936...49,193,709
JBrowse link
G DRD2 dopamine receptor D2 ISO RGD PMID:12944496 RGD:1581422 NCBI chr 9:41,068,618...41,135,262
Ensembl chr 9:41,068,779...41,133,599
JBrowse link
negative regulation of circadian sleep/wake cycle, wakefulness term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PTGER3 prostaglandin E receptor 3 ISO RGD PMID:10923657 RGD:10043386 NCBI chr 6:141,958,955...142,160,437
Ensembl chr 6:141,958,954...142,161,292
JBrowse link
negative regulation of locomotor rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LEPR leptin receptor ISO RGD PMID:16982424 RGD:10412019 NCBI chr 6:146,802,297...146,896,152
Ensembl chr 6:146,798,979...146,896,108
JBrowse link
negative regulation of progesterone secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TP53 tumor protein p53 IMP (PMID:18703674) AgBase PMID:18703674 NCBI chr12:52,939,643...52,953,786
Ensembl chr12:52,939,643...52,953,819
JBrowse link
ovarian cumulus expansion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMPR1B bone morphogenetic protein receptor type 1B IEA Ensembl GO_REF:0000107 NCBI chr 8:124,536,648...125,035,841
Ensembl chr 8:124,536,648...124,841,530
JBrowse link
G EREG epiregulin ISO PMID:15459120 UniProt PMID:15459120 RGD:2316284 NCBI chr 8:70,351,316...70,372,530
Ensembl chr 8:70,351,309...70,372,518
JBrowse link
G GDF9 growth differentiation factor 9 IMP (PMID:24313324) AgBase PMID:24313324 NCBI chr 2:135,181,494...135,184,451
Ensembl chr 2:135,180,104...135,186,389
JBrowse link
G KIF20A kinesin family member 20A IMP (PMID:25036038) AgBase PMID:25036038 NCBI chr 2:140,202,316...140,213,144
Ensembl chr 2:140,202,015...140,211,157
JBrowse link
G PTX3 pentraxin 3 IEA Ensembl GO_REF:0000107 NCBI chr13:97,273,594...97,279,570
Ensembl chr13:97,273,594...97,279,569
JBrowse link
ovarian follicle rupture term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGT angiotensinogen ISO (MGI:MGI:1934990|PMID:11384650) MGI PMID:11384650 MGI:MGI:1934990 NCBI chr14:59,643,030...59,656,835
Ensembl chr14:59,643,292...59,672,428
JBrowse link
G EDN2 endothelin 2 ISO RGD PMID:16410304 RGD:1581792 NCBI chr 6:169,751,956...169,758,011
Ensembl chr 6:169,752,026...169,758,583
JBrowse link
G NRIP1 nuclear receptor interacting protein 1 IEA Ensembl GO_REF:0000107 NCBI chr13:179,822,731...179,916,226
Ensembl chr13:179,824,862...179,915,177
JBrowse link
ovulation cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADH4 alcohol dehydrogenase 4 (class II), pi polypeptide ISO RGD PMID:11095078 RGD:2316105 NCBI chr 8:121,225,485...121,259,262
NCBI chr  X:98,582,002...98,583,002
Ensembl chr 8:121,225,656...121,261,747
JBrowse link
G AXL AXL receptor tyrosine kinase IEA Ensembl GO_REF:0000107 NCBI chr 6:49,245,802...49,277,917
Ensembl chr 6:49,245,673...49,277,914
JBrowse link
G BMP2 bone morphogenetic protein 2 ISO RGD PMID:15283681 RGD:2289021 NCBI chr17:15,750,487...15,762,982
Ensembl chr17:15,749,835...15,761,215
JBrowse link
G BMPR1B bone morphogenetic protein receptor type 1B ISO (MGI:MGI:2136692|PMID:11416163) UniProtKB PMID:11416163 MGI:MGI:2136692 NCBI chr 8:124,536,648...125,035,841
Ensembl chr 8:124,536,648...124,841,530
JBrowse link
G CHGA chromogranin A ISO RGD PMID:12873792 RGD:6907048 NCBI chr 7:114,345,542...114,357,799
Ensembl chr 7:114,345,091...114,358,571
JBrowse link
G CHRNA7 cholinergic receptor nicotinic alpha 7 subunit ISO (MGI:MGI:3052645|PMID:1400473) MGI PMID:1400473 MGI:MGI:3052645 NCBI chr 1:142,803,697...142,937,124
Ensembl chr 1:142,803,698...142,937,788
JBrowse link
G EGFR epidermal growth factor receptor ISO RGD PMID:11796513 RGD:70386 NCBI chr 9:139,302,410...139,474,632
Ensembl chr 9:139,300,022...139,478,882
JBrowse link
G FAS Fas cell surface death receptor ISO RGD PMID:16461545 RGD:1600349 NCBI chr14:100,927,305...100,954,781 JBrowse link
G GABRB1 gamma-aminobutyric acid type A receptor subunit beta1 ISO RGD PMID:16226387 RGD:6480231 NCBI chr 8:36,978,014...37,354,950
Ensembl chr 8:36,978,547...37,355,009
JBrowse link
G GDF10 growth differentiation factor 10 ISO RGD PMID:12741959 RGD:2316371 NCBI chr14:88,522,956...88,534,719
Ensembl chr14:88,517,068...88,534,874
JBrowse link
G GNRH1 gonadotropin releasing hormone 1 ISO RGD PMID:16672174 RGD:1599845 NCBI chr14:9,442,971...9,447,521
Ensembl chr14:9,442,971...9,447,521
JBrowse link
G NHLH2 nescient helix-loop-helix 2 IEA Ensembl GO_REF:0000107 NCBI chr 4:104,852,287...104,858,042
Ensembl chr 4:104,857,635...104,858,042
JBrowse link
G PRL prolactin ISO RGD PMID:17499646 RGD:1642571 NCBI chr 7:17,451,367...17,463,771
Ensembl chr 7:17,451,367...17,463,741
JBrowse link
G SERPINF1 serpin family F member 1 ISO RGD PMID:23466670 RGD:8590225 NCBI chr12:47,949,004...47,959,471
Ensembl chr12:47,943,051...47,959,472
JBrowse link
G TIMP4 TIMP metallopeptidase inhibitor 4 ISO RGD PMID:12493716 RGD:1302332 NCBI chr13:68,179,803...68,191,199
Ensembl chr13:68,179,805...68,190,942
JBrowse link
G TYRO3 TYRO3 protein tyrosine kinase ISS UniProt GO_REF:0000024 NCBI chr 1:129,811,540...129,829,395
Ensembl chr 1:129,811,539...129,828,991
JBrowse link
ovulation cycle process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CMPK1 cytidine/uridine monophosphate kinase 1 ISO RGD PMID:16400681 RGD:5133250 NCBI chr 6:164,161,439...164,197,429
Ensembl chr 6:164,162,515...164,197,379
JBrowse link
G FSHR follicle stimulating hormone receptor ISO (MGI:MGI:1926755|PMID:11089565) MGI PMID:11089565 MGI:MGI:1926755 NCBI chr 3:91,607,236...91,775,255
Ensembl chr 3:91,607,305...91,774,683
JBrowse link
G GLRX glutaredoxin ISO RGD PMID:15956334 RGD:9686044 NCBI chr 2:102,425,580...102,437,851 JBrowse link
G LHCGR luteinizing hormone/choriogonadotropin receptor IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:91,964,415...92,023,821 JBrowse link
G MAP2K6 mitogen-activated protein kinase kinase 6 ISO RGD PMID:11328854 RGD:7495835 NCBI chr12:10,891,445...11,018,617
Ensembl chr12:10,894,932...11,018,641
JBrowse link
G MSTN myostatin ISO RGD PMID:18845635 RGD:2303546 NCBI chr15:94,623,526...94,628,440
Ensembl chr15:94,620,269...94,628,546
JBrowse link
G PAM peptidylglycine alpha-amidating monooxygenase ISO RGD PMID:9618561 RGD:2302425 NCBI chr 2:108,255,923...108,536,192
Ensembl chr 2:108,255,930...108,536,881
JBrowse link
ovulation from ovarian follicle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAMTS1 ADAM metallopeptidase with thrombospondin type 1 motif 1 IEA Ensembl GO_REF:0000107 NCBI chr13:190,277,175...190,285,957
Ensembl chr13:190,276,424...190,286,205
JBrowse link
G AFP alpha fetoprotein IEA Ensembl GO_REF:0000107 NCBI chr 8:69,677,690...69,698,864
Ensembl chr 8:69,677,684...69,698,864
JBrowse link
G CBR1 carbonyl reductase 1 ISO RGD PMID:10642578 RGD:1299856 NCBI chr13:199,617,406...199,622,407
Ensembl chr13:199,617,318...199,622,405
JBrowse link
G FOXO3 forkhead box O3 IEA Ensembl GO_REF:0000107 NCBI chr 1:74,626,673...74,760,323
Ensembl chr 1:74,628,217...74,760,328
JBrowse link
G LEP leptin ISO RGD PMID:17071778 RGD:1582677 NCBI chr18:20,106,867...20,124,071
Ensembl chr18:20,106,868...20,123,447
JBrowse link
G LEPR leptin receptor ISO RGD PMID:12959975 RGD:1582680 NCBI chr 6:146,802,297...146,896,152
Ensembl chr 6:146,798,979...146,896,108
JBrowse link
G MMP19 matrix metallopeptidase 19 ISO RGD PMID:15286033 RGD:1642024 NCBI chr 5:21,279,514...21,285,943
Ensembl chr 5:21,280,130...21,285,774
JBrowse link
G MMP2 matrix metallopeptidase 2 ISO RGD PMID:14668206 RGD:1582606 NCBI chr 6:30,059,247...30,087,031
Ensembl chr 6:30,058,594...30,086,982
JBrowse link
G NOS2 nitric oxide synthase 2 NOT ISO (MGI:MGI:2157249|PMID:11779605) MGI PMID:11779605 MGI:MGI:2157249 NCBI chr12:44,174,944...44,219,875
Ensembl chr12:44,174,944...44,327,111
JBrowse link
G NOS3 nitric oxide synthase 3 IEA Ensembl GO_REF:0000107 NCBI chr18:6,209,218...6,228,912
Ensembl chr18:6,209,156...6,228,938
JBrowse link
G PGR progesterone receptor IEA Ensembl GO_REF:0000107 NCBI chr 9:32,035,684...32,129,776
Ensembl chr 9:32,035,684...32,129,221
JBrowse link
G PLA2G4A phospholipase A2 group IVA ISO RGD PMID:10189070 RGD:1642477 NCBI chr 9:127,853,581...128,164,825
Ensembl chr 9:127,859,051...128,162,636
JBrowse link
G SIRT1 sirtuin 1 IEA Ensembl GO_REF:0000107 NCBI chr14:71,091,167...71,126,351
Ensembl chr14:71,091,157...71,123,299
JBrowse link
positive regulation of antral ovarian follicle growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PTGER4 prostaglandin E receptor 4 ISO RGD PMID:15944932 RGD:10003098 NCBI chr16:25,670,832...25,686,556
Ensembl chr16:25,670,862...25,686,552
JBrowse link
G ZP3 zona pellucida glycoprotein 3 ISS
IEA
UniProt
Ensembl
GO_REF:0000024, GO_REF:0000107 NCBI chr 3:9,934,760...9,944,924
Ensembl chr 3:9,934,761...9,944,941
JBrowse link
positive regulation of circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARNTL aryl hydrocarbon receptor nuclear translocator like IEA Ensembl GO_REF:0000107 NCBI chr 2:45,895,637...46,025,174
Ensembl chr 2:45,895,289...46,025,165
JBrowse link
G ARNTL2 aryl hydrocarbon receptor nuclear translocator like 2 IEA Ensembl GO_REF:0000107 NCBI chr 5:46,289,873...46,482,369
Ensembl chr 5:46,290,005...46,482,280
JBrowse link
G BTRC beta-transducin repeat containing E3 ubiquitin protein ligase IEA Ensembl GO_REF:0000107 NCBI chr14:112,398,764...112,588,041
Ensembl chr14:112,398,866...112,588,041
JBrowse link
G FBXW11 F-box and WD repeat domain containing 11 IEA Ensembl GO_REF:0000107 NCBI chr16:52,212,401...52,337,893
Ensembl chr16:52,212,655...52,337,913
JBrowse link
G MTNR1B melatonin receptor 1B ISO RGD PMID:12643943 RGD:9588678 NCBI chr 9:25,556,756...25,557,792
Ensembl chr 9:25,545,560...25,557,652
JBrowse link
G NKX2-1 NK2 homeobox 1 IEA Ensembl GO_REF:0000107 NCBI chr 7:63,487,200...63,491,580
Ensembl chr 7:63,487,807...63,491,575
JBrowse link
G NR1D1 nuclear receptor subfamily 1 group D member 1 ISO RGD PMID:18946026 RGD:10448985 NCBI chr12:22,263,549...22,274,131
Ensembl chr12:22,263,657...22,271,643
JBrowse link
G PRKG1 protein kinase cGMP-dependent 1 ISO RGD PMID:12930792 RGD:7777105 NCBI chr14:97,558,531...98,793,080
Ensembl chr14:97,560,785...98,793,318
JBrowse link
G RORA RAR related orphan receptor A IEA Ensembl GO_REF:0000107 NCBI chr 1:110,719,004...111,482,807
Ensembl chr 1:110,719,190...111,477,703
JBrowse link
G RORC RAR related orphan receptor C ISO (MGI:MGI:5504349|PMID:22753030) UniProtKB PMID:22753030 MGI:MGI:5504349 NCBI chr 4:97,374,672...97,399,017
Ensembl chr 4:97,375,136...97,400,231
JBrowse link
G THRAP3 thyroid hormone receptor associated protein 3 IEA Ensembl GO_REF:0000107 NCBI chr 6:92,350,021...92,412,335
Ensembl chr 6:92,350,073...92,412,330
JBrowse link
positive regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALB albumin ISO RGD PMID:9748091 RGD:1625449 NCBI chr 8:69,643,427...69,663,152
Ensembl chr 8:69,531,487...69,718,304
JBrowse link
G CASP1 caspase 1, apoptosis-related cysteine peptidase ISO RGD PMID:16455762 RGD:2315921 NCBI chr 9:35,188,066...35,199,364
Ensembl chr 9:35,186,420...35,200,328
JBrowse link
G GHRH growth hormone releasing hormone ISO RGD PMID:19889861, PMID:20237285 RGD:10401262, RGD:2325188 NCBI chr17:40,386,725...40,398,312
Ensembl chr17:40,387,344...40,397,857
JBrowse link
G GHRHR growth hormone releasing hormone receptor ISO RGD PMID:20237285 RGD:10401262 NCBI chr18:42,030,505...42,046,178
Ensembl chr18:42,030,510...42,046,184
JBrowse link
G GHRL ghrelin and obestatin prepropeptide IEA Ensembl GO_REF:0000107 NCBI chr13:66,442,106...66,453,576
Ensembl chr13:66,316,436...66,452,917
JBrowse link
G MTNR1B melatonin receptor 1B ISO RGD PMID:19429170, PMID:22171046 RGD:9588660, RGD:9588665 NCBI chr 9:25,556,756...25,557,792
Ensembl chr 9:25,545,560...25,557,652
JBrowse link
G NPY2R neuropeptide Y receptor Y2 ISO RGD PMID:16378653 RGD:1642507 NCBI chr 8:74,039,959...74,048,398
Ensembl chr 8:74,039,609...74,047,817
JBrowse link
G PTGER3 prostaglandin E receptor 3 ISO RGD PMID:10923657 RGD:10043386 NCBI chr 6:141,958,955...142,160,437
Ensembl chr 6:141,958,954...142,161,292
JBrowse link
G PTGER4 prostaglandin E receptor 4 ISO RGD PMID:10923657 RGD:10043386 NCBI chr16:25,670,832...25,686,556
Ensembl chr16:25,670,862...25,686,552
JBrowse link
positive regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GHRH growth hormone releasing hormone NOT ISO (PMID:15538933) BHF-UCL PMID:15538933 NCBI chr17:40,386,725...40,398,312
Ensembl chr17:40,387,344...40,397,857
JBrowse link
G PMCH pro-melanin concentrating hormone ISO RGD PMID:12964948 RGD:1642489 NCBI chr 5:82,018,915...82,020,267
Ensembl chr 5:82,018,915...82,020,818
JBrowse link
G UTS2 urotensin 2 ISO RGD PMID:15944374 RGD:2306844 NCBI chr 6:68,552,889...68,560,827 JBrowse link
G UTS2R urotensin 2 receptor ISO RGD PMID:15944374 RGD:2306844 NCBI chr12:695,765...700,678 JBrowse link
positive regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADORA2A adenosine A2a receptor ISO in the sleep-promoting area of the lateral preoptic area of the brain RGD PMID:16109808 RGD:1625234 NCBI chr14:49,467,186...49,485,845
Ensembl chr14:49,468,862...49,485,841
JBrowse link
G OPN4 opsin 4 ISO (MGI:MGI:5925970|PMID:26320947) MGI PMID:26320947 MGI:MGI:5925970 NCBI chr14:87,645,563...87,660,820
Ensembl chr14:87,644,240...87,722,245
JBrowse link
positive regulation of circadian sleep/wake cycle, wakefulness term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NLGN1 neuroligin 1 IEA Ensembl GO_REF:0000107 NCBI chr13:111,851,007...112,727,202
Ensembl chr13:112,036,053...112,725,618
JBrowse link
G NPS neuropeptide S ISO RGD PMID:22300983 RGD:9831203 NCBI chr14:136,835,630...136,839,511
Ensembl chr14:136,836,352...136,839,510
JBrowse link
G UTS2 urotensin 2 ISO RGD PMID:15944374 RGD:2306844 NCBI chr 6:68,552,889...68,560,827 JBrowse link
G UTS2R urotensin 2 receptor ISO RGD PMID:15944374 RGD:2306844 NCBI chr12:695,765...700,678 JBrowse link
positive regulation of progesterone secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MFN2 mitofusin 2 ISO RGD PMID:25120590 RGD:13204819 NCBI chr 6:72,026,512...72,056,439
Ensembl chr 6:72,026,722...72,056,439
JBrowse link
G RETN resistin ISO RGD PMID:21239528 RGD:7207233 NCBI chr 2:71,484,164...71,485,577
Ensembl chr 2:71,484,169...71,485,616
JBrowse link
G RUNX1 RUNX family transcription factor 1 ISO RGD PMID:16675540 RGD:6482842 NCBI chr13:198,371,835...198,635,648
Ensembl chr13:198,371,835...198,638,189
JBrowse link
preantral ovarian follicle growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMH anti-Mullerian hormone ISO RGD PMID:11133686 RGD:2315649 NCBI chr 2:76,415,564...76,418,315
Ensembl chr 2:76,405,253...76,418,312
JBrowse link
G GPR149 G protein-coupled receptor 149 IEA Ensembl GO_REF:0000107 NCBI chr13:94,356,371...94,419,917
Ensembl chr13:94,354,306...94,419,184
JBrowse link
G ZNF830 zinc finger protein 830 IEA Ensembl GO_REF:0000107 Ensembl chr12:40,203,942...40,205,045 JBrowse link
primary ovarian follicle growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FSHR follicle stimulating hormone receptor IEA Ensembl GO_REF:0000107 NCBI chr 3:91,607,236...91,775,255
Ensembl chr 3:91,607,305...91,774,683
JBrowse link
G SRC SRC proto-oncogene, non-receptor tyrosine kinase ISO RGD PMID:22905678 RGD:13210788 NCBI chr17:40,470,970...40,524,862
Ensembl chr17:40,471,009...40,524,860
JBrowse link
progesterone secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FZD4 frizzled class receptor 4 IEA Ensembl GO_REF:0000107 NCBI chr 9:20,714,995...20,721,460
Ensembl chr 9:20,294,885...20,721,766
JBrowse link
G INHBA inhibin subunit beta A ISS UniProt GO_REF:0000024 NCBI chr12:53,115,379...53,117,128
NCBI chr18:52,889,684...52,909,260
Ensembl chr18:52,889,684...52,900,967
JBrowse link
regulation of circadian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADCY1 adenylate cyclase 1 IEA Ensembl GO_REF:0000107 NCBI chr18:50,043,572...50,143,549
Ensembl chr18:50,046,575...50,143,771
JBrowse link
G ATG7 autophagy related 7 ISO (MGI:MGI:6208175|PMID:29937374) UniProt PMID:29937374 MGI:MGI:6208175 NCBI chr13:67,301,756...67,699,141
Ensembl chr13:67,417,938...67,707,660
JBrowse link
G BHLHE40 basic helix-loop-helix family member e40 ISO (MGI:MGI:6282958|PMID:30012868) UniProt PMID:30012868 MGI:MGI:6282958 NCBI chr13:61,526,121...61,533,686
Ensembl chr13:61,526,197...61,533,686
JBrowse link
G BTRC beta-transducin repeat containing E3 ubiquitin protein ligase ISO (PMID:15917222) UniProtKB PMID:15917222 NCBI chr14:112,398,764...112,588,041
Ensembl chr14:112,398,866...112,588,041
JBrowse link
G CCAR2 cell cycle and apoptosis regulator 2 IEA Ensembl GO_REF:0000107 NCBI chr14:6,860,052...6,874,334
Ensembl chr14:6,859,663...6,874,331
JBrowse link
G CDK1 cyclin dependent kinase 1 IEA Ensembl GO_REF:0000107 NCBI chr14:64,233,945...64,255,290
Ensembl chr14:64,233,988...64,395,453
JBrowse link
G CLOCK clock circadian regulator IEA Ensembl GO_REF:0000107 NCBI chr 8:54,793,323...54,910,192
Ensembl chr 8:54,788,864...54,910,146
JBrowse link
G CREB1 cAMP responsive element binding protein 1 ISO RGD PMID:12409294 RGD:633667 NCBI chr15:110,705,548...110,773,037
Ensembl chr15:110,697,408...110,771,755
JBrowse link
G CREM cAMP responsive element modulator ISO RGD PMID:15936880 RGD:1582464 NCBI chr10:57,829,523...57,895,610
Ensembl chr10:57,829,518...57,895,610
JBrowse link
G CRY1 cryptochrome circadian regulator 1 ISO (MGI:MGI:1334825|PMID:10217146), (MGI:MGI:4366197|PMID:19833968), (MGI:MGI:4947326|PMID:21236481), (MGI:MGI:5490394|PMID:23616524), (MGI:MGI:5908518|PMID:26431207)
(MGI:MGI:5567898|PMID:23575670)
UniProt
UniProtKB
PMID:10217146, PMID:19833968, PMID:21236481, PMID:23575670, PMID:23616524, PMID:26431207 MGI:MGI:1334825, MGI:MGI:4366197, MGI:MGI:4947326, MGI:MGI:5490394, MGI:MGI:5567898, MGI:MGI:5908518 NCBI chr 5:13,275,265...13,429,566
Ensembl chr 5:13,275,544...13,364,594
JBrowse link
G CRY2 cryptochrome circadian regulator 2 ISO (MGI:MGI:1334825|PMID:10217146), (MGI:MGI:5490394|PMID:23616524)
(MGI:MGI:5567898|PMID:23575670)
UniProtKB PMID:10217146, PMID:23575670, PMID:23616524 MGI:MGI:1334825, MGI:MGI:5490394, MGI:MGI:5567898 NCBI chr 2:16,587,101...16,620,380
Ensembl chr 2:16,585,966...16,620,405
JBrowse link
G CSNK1D casein kinase 1 delta IEA Ensembl GO_REF:0000107 NCBI chr12:768,856...794,495
Ensembl chr12:768,865...796,532
JBrowse link
G DDB1 damage specific DNA binding protein 1 IEA Ensembl GO_REF:0000107 NCBI chr 2:10,171,554...10,201,602
Ensembl chr 2:10,171,499...10,201,602
JBrowse link
G DRD4 dopamine receptor D4 IEA Ensembl GO_REF:0000107 NCBI chr 2:398,766...401,539
Ensembl chr 2:398,766...401,432
JBrowse link
G EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit IEA Ensembl GO_REF:0000107 NCBI chr 9:109,384,976...109,450,943
Ensembl chr 9:109,384,995...109,450,941
JBrowse link
G FBXL3 F-box and leucine rich repeat protein 3 ISO (MGI:MGI:3710694|PMID:17463252), (MGI:MGI:3715674|PMID:17462724), (MGI:MGI:5490394|PMID:23616524)
(PMID:17463251)
UniProtKB PMID:17462724, PMID:17463251, PMID:17463252, PMID:23616524 MGI:MGI:3710694, MGI:MGI:3715674, MGI:MGI:5490394 NCBI chr11:49,131,663...49,151,380
Ensembl chr11:49,130,182...49,151,009
JBrowse link
G FBXW7 F-box and WD repeat domain containing 7 IEA Ensembl GO_REF:0000107 NCBI chr 8:76,482,027...76,699,354
Ensembl chr 8:76,482,022...76,699,351
JBrowse link
G GSK3B glycogen synthase kinase 3 beta ISO (MGI:MGI:6294161|PMID:28556462) UniProt PMID:28556462 MGI:MGI:6294161 NCBI chr13:140,136,109...140,370,197
Ensembl chr13:140,136,158...140,369,574
JBrowse link
G HDAC3 histone deacetylase 3 ISO (MGI:MGI:5882311|PMID:26776516) UniProt PMID:26776516 MGI:MGI:5882311 NCBI chr 2:143,273,188...143,287,421
Ensembl chr 2:143,273,191...143,287,387
JBrowse link
G HNF4A hepatocyte nuclear factor 4 alpha IEA Ensembl GO_REF:0000107 NCBI chr17:46,783,772...46,847,505
Ensembl chr17:46,783,777...46,847,503
JBrowse link
G HNRNPD heterogeneous nuclear ribonucleoprotein D IEA Ensembl GO_REF:0000107 NCBI chr 8:135,844,492...135,862,633
Ensembl chr 8:135,844,487...135,862,633
JBrowse link
G ID2 inhibitor of DNA binding 2 ISS UniProt GO_REF:0000024 NCBI chr 3:127,500,759...127,503,207
Ensembl chr 3:127,500,759...127,503,257
JBrowse link
G KDM2A lysine demethylase 2A IEA Ensembl GO_REF:0000107 NCBI chr 2:5,238,690...5,357,799
Ensembl chr 2:5,240,287...5,357,164
JBrowse link
G KLF10 Kruppel like factor 10 ISO PMID:20070857 UniProt PMID:20070857 RGD:10047352 NCBI chr 4:34,430,132...34,435,990
Ensembl chr 4:34,421,359...34,436,009
JBrowse link
G LOC100523244 casein kinase I IEA Ensembl GO_REF:0000107 NCBI chr 5:9,594,461...9,620,483 JBrowse link
G MAGED1 MAGE family member D1 IEA Ensembl GO_REF:0000107 NCBI chr  X:45,258,761...45,329,282
Ensembl chr  X:45,282,056...45,329,278
JBrowse link
G MAGEL2 MAGE family member L2 IEA Ensembl GO_REF:0000107 NCBI chr 1:142,450,414...142,454,633
Ensembl chr 1:142,448,689...142,454,697
JBrowse link
G MAPK10 mitogen-activated protein kinase 10 ISO (MGI:MGI:5431019|PMID:22441692) UniProt PMID:22441692 MGI:MGI:5431019 NCBI chr 8:132,445,818...132,751,575
Ensembl chr 8:132,249,635...132,776,820
JBrowse link
G MAPK8 mitogen-activated protein kinase 8 ISO (MGI:MGI:5431019|PMID:22441692) UniProtKB PMID:22441692 MGI:MGI:5431019 NCBI chr14:88,988,914...89,108,875
Ensembl chr14:88,988,949...89,172,200
JBrowse link
G MAPK9 mitogen-activated protein kinase 9 IEA Ensembl GO_REF:0000107 NCBI chr 2:78,338,466...78,399,108
Ensembl chr 2:78,338,369...78,399,105
JBrowse link
G MTOR mechanistic target of rapamycin kinase ISO (MGI:MGI:6159528|PMID:29750810) UniProt PMID:29750810 MGI:MGI:6159528 NCBI chr 6:71,286,989...71,412,913
Ensembl chr 6:71,286,989...71,412,888
JBrowse link
G NOCT nocturnin IEA Ensembl GO_REF:0000107 NCBI chr 8:87,885,411...87,909,231
Ensembl chr 8:87,885,412...87,909,655
JBrowse link
G NONO non-POU domain containing octamer binding IEA Ensembl GO_REF:0000107 Ensembl chr  X:57,278,915...57,319,588 JBrowse link
G NPAS2 neuronal PAS domain protein 2 ISO (MGI:MGI:5518489|PMID:24048828) UniProtKB PMID:24048828 MGI:MGI:5518489 NCBI chr 3:53,298,805...53,490,375
Ensembl chr 3:53,298,863...53,438,910
JBrowse link
G NR1D1 nuclear receptor subfamily 1 group D member 1 ISO PMID:22425774
(MGI:MGI:4360821|PMID:19721697), (MGI:MGI:4429726|PMID:20159955), (MGI:MGI:6162161|PMID:29533925)
UniProt PMID:19721697, PMID:20159955, PMID:22425774, PMID:29533925 MGI:MGI:4360821, MGI:MGI:4429726, MGI:MGI:6162161, RGD:8553819 NCBI chr12:22,263,549...22,274,131
Ensembl chr12:22,263,657...22,271,643
JBrowse link
G NR1D2 nuclear receptor subfamily 1 group D member 2 ISO (MGI:MGI:5526909|PMID:23221024)
(MGI:MGI:6162161|PMID:29533925)
UniProtKB
UniProt
PMID:23221024, PMID:29533925 MGI:MGI:5526909, MGI:MGI:6162161 NCBI chr13:10,756,954...10,791,219
Ensembl chr13:10,756,926...10,791,210
JBrowse link
G OPN4 opsin 4 IEA Ensembl GO_REF:0000107 NCBI chr14:87,645,563...87,660,820
Ensembl chr14:87,644,240...87,722,245
JBrowse link
G PER1 period circadian regulator 1 ISO (MGI:MGI:1935010|PMID:11395012) UniProtKB PMID:11395012 MGI:MGI:1935010 NCBI chr12:53,361,863...53,376,723
Ensembl chr12:53,361,868...53,376,611
JBrowse link
G PER2 period circadian regulator 2 ISO (MGI:MGI:1935010|PMID:11395012), (MGI:MGI:4410390|PMID:19917250) UniProtKB PMID:11395012, PMID:19917250 MGI:MGI:1935010, MGI:MGI:4410390 NCBI chr15:137,793,419...137,837,854
Ensembl chr15:137,793,419...137,837,236
JBrowse link
G PML PML nuclear body scaffold ISO (MGI:MGI:5314433|PMID:22274616) UniProtKB PMID:22274616 MGI:MGI:5314433 NCBI chr 7:59,405,044...59,450,155
Ensembl chr 7:59,405,048...59,450,150
JBrowse link
G PPARA peroxisome proliferator activated receptor alpha IEA Ensembl GO_REF:0000107 NCBI chr 5:3,302,755...3,321,091
Ensembl chr 5:3,300,708...3,366,361
JBrowse link
G PPARG peroxisome proliferator activated receptor gamma ISO (MGI:MGI:3830801|PMID:19041764) UniProtKB PMID:19041764 MGI:MGI:3830801 NCBI chr13:68,301,566...68,433,951
Ensembl chr13:68,302,655...68,433,947
JBrowse link
G PPARGC1A PPARG coactivator 1 alpha ISS UniProt GO_REF:0000024 NCBI chr 8:17,841,844...18,527,953
Ensembl chr 8:17,841,844...17,961,909
JBrowse link
G PPP1CA protein phosphatase 1 catalytic subunit alpha ISO (PMID:21712997)
(MGI:MGI:5294280|PMID:21930935)
(MGI:MGI:5086036|PMID:21712997)
UniProtKB PMID:21712997, PMID:21930935 MGI:MGI:5086036, MGI:MGI:5294280 NCBI chr 2:5,120,202...5,123,168
Ensembl chr 2:5,120,140...5,126,953
JBrowse link
G PPP1CB protein phosphatase 1 catalytic subunit beta ISS
IBA
(PMID:21873635) UniProt
GO_Central
PMID:21873635 GO_REF:0000024 NCBI chr 3:110,437,681...110,474,896
Ensembl chr 3:110,437,687...110,474,891
JBrowse link
G PPP1CC protein phosphatase 1 catalytic subunit gamma ISO (PMID:21712997)
(MGI:MGI:5086036|PMID:21712997)
(MGI:MGI:5294280|PMID:21930935)
UniProtKB
UniProt
PMID:21712997, PMID:21930935 MGI:MGI:5086036, MGI:MGI:5294280 NCBI chr14:32,071,472...32,091,267
Ensembl chr14:32,070,544...32,091,499
JBrowse link
G PRKAA1 protein kinase AMP-activated catalytic subunit alpha 1 ISS
IEA
UniProt
Ensembl
GO_REF:0000024, GO_REF:0000107 NCBI chr16:25,745,902...25,783,524
Ensembl chr16:25,745,321...25,783,610
JBrowse link
G PRKAA2 protein kinase AMP-activated catalytic subunit alpha 2 IEA Ensembl GO_REF:0000107 NCBI chr 6:155,683,392...155,754,283
Ensembl chr 6:155,681,781...155,754,272
JBrowse link
G PRKCG protein kinase C gamma IEA Ensembl GO_REF:0000107 NCBI chr 6:56,213,479...56,235,683
Ensembl chr 6:56,213,483...56,234,656
JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit IEA Ensembl GO_REF:0000107 NCBI chr 4:79,687,375...79,850,146
Ensembl chr 4:79,687,359...79,847,281
JBrowse link
G PROX1 prospero homeobox 1 IEA Ensembl GO_REF:0000107 NCBI chr 9:129,527,704...129,583,693
Ensembl chr 9:129,532,164...129,580,979
JBrowse link
G PSPC1 paraspeckle component 1 IEA Ensembl GO_REF:0000107 NCBI chr11:477,010...572,090
Ensembl chr11:482,559...572,090
JBrowse link
G ROCK2 Rho associated coiled-coil containing protein kinase 2 IMP (PMID:23172836) UniProt PMID:23172836 NCBI chr 3:125,353,063...125,493,368
Ensembl chr 3:125,353,119...125,491,963
JBrowse link
G RORA RAR related orphan receptor A ISO (MGI:MGI:5567901|PMID:23172836) UniProtKB PMID:23172836 MGI:MGI:5567901 NCBI chr 1:110,719,004...111,482,807
Ensembl chr 1:110,719,190...111,477,703
JBrowse link
G RORB RAR related orphan receptor B IEA Ensembl GO_REF:0000107 NCBI chr 1:227,573,972...227,776,806
Ensembl chr 1:227,574,647...227,772,693
JBrowse link
G SFPQ splicing factor proline and glutamine rich ISO (MGI:MGI:5444785|PMID:22966205) UniProtKB PMID:22966205 MGI:MGI:5444785 NCBI chr 6:91,391,552...91,408,236
Ensembl chr 6:91,391,555...91,408,219
JBrowse link
G SIAH2 siah E3 ubiquitin protein ligase 2 IEA Ensembl GO_REF:0000107 NCBI chr13:90,951,798...90,971,538
Ensembl chr13:90,949,021...90,971,411
JBrowse link
G SPSB4 splA/ryanodine receptor domain and SOCS box containing 4 IEA Ensembl GO_REF:0000107 NCBI chr13:81,849,908...81,926,764
Ensembl chr13:81,867,740...81,926,762
JBrowse link
G SRRD SRR1 domain containing IEA Ensembl GO_REF:0000107 NCBI chr14:44,073,562...44,097,998
Ensembl chr14:44,073,636...44,096,954
JBrowse link
G TARDBP TAR DNA binding protein IEA Ensembl GO_REF:0000107 NCBI chr 6:71,213,584...71,227,707
Ensembl chr 6:71,213,852...71,227,704
JBrowse link
G TIMELESS timeless circadian regulator IEA Ensembl GO_REF:0000107 Ensembl chr 5:21,759,474...21,787,521 JBrowse link
G TOP2A DNA topoisomerase II alpha ISS
IEA
UniProt
Ensembl
GO_REF:0000024, GO_REF:0000107 NCBI chr12:22,001,300...22,028,452
Ensembl chr12:22,001,336...22,028,454
JBrowse link
G UBE3A ubiquitin protein ligase E3A IEA Ensembl GO_REF:0000107 NCBI chr 1:141,887,179...142,001,595
Ensembl chr 1:141,887,168...141,997,241
JBrowse link
G USP7 ubiquitin specific peptidase 7 IEA Ensembl GO_REF:0000107 NCBI chr 3:33,754,357...33,810,480
Ensembl chr 3:33,775,829...33,810,466
JBrowse link
G USP9X ubiquitin specific peptidase 9 X-linked IEA Ensembl GO_REF:0000107 NCBI chr  X:36,736,049...36,888,702
Ensembl chr  X:36,760,819...36,885,275
JBrowse link
regulation of circadian sleep/wake cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NR1D1 nuclear receptor subfamily 1 group D member 1 IEA Ensembl GO_REF:0000107 NCBI chr12:22,263,549...22,274,131
Ensembl chr12:22,263,657...22,271,643
JBrowse link
regulation of circadian sleep/wake cycle, non-REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHRNB2 cholinergic receptor nicotinic beta 2 subunit IEA Ensembl GO_REF:0000107 NCBI chr 4:95,196,992...95,211,084
Ensembl chr 4:95,198,717...95,211,037
JBrowse link
G IL6 interleukin 6 ISO RGD PMID:12667648 RGD:1358315 NCBI chr 9:91,506,421...91,510,830
Ensembl chr 9:91,506,340...91,511,263
JBrowse link
G KCNA2 potassium voltage-gated channel subfamily A member 2 IEA Ensembl GO_REF:0000107 NCBI chr 4:109,534,923...109,570,172
Ensembl chr 4:109,557,377...109,560,998
JBrowse link
regulation of circadian sleep/wake cycle, REM sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHRNB2 cholinergic receptor nicotinic beta 2 subunit IEA Ensembl GO_REF:0000107 NCBI chr 4:95,196,992...95,211,084
Ensembl chr 4:95,198,717...95,211,037
JBrowse link
regulation of circadian sleep/wake cycle, sleep term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase ISO RGD PMID:11038259 RGD:631747 NCBI chr17:47,044,492...47,072,232
Ensembl chr17:47,044,495...47,072,245
JBrowse link
G ADRB1 adrenoceptor beta 1 IEA
ISS
Ensembl
UniProt
GO_REF:0000024, GO_REF:0000107 NCBI chr14:124,400,330...124,401,739
Ensembl chr14:124,400,189...124,401,739
JBrowse link
G CORT cortistatin ISO RGD PMID:8622767 RGD:727760 NCBI chr 6:70,716,630...70,717,980
Ensembl chr 6:70,716,296...70,718,268
JBrowse link
G CSF2 colony stimulating factor 2 ISO RGD PMID:12047622 RGD:10449529 NCBI chr 2:134,354,724...134,357,155
Ensembl chr 2:134,354,724...134,357,155
JBrowse link
G DRD3 dopamine receptor D3 ISO RGD PMID:15913875 RGD:1625069 NCBI chr13:145,769,294...145,817,997
Ensembl chr13:145,771,510...145,819,173
JBrowse link
G NMU neuromedin U ISO PMID:20233222 UniProt PMID:20233222 RGD:12911001 NCBI chr 8:54,952,333...54,978,577
Ensembl chr 8:54,952,339...54,978,574
JBrowse link
G PER3 period circadian regulator 3 ISO (MGI:MGI:5300112|PMID:21957163)
(PMID:17346965), (PMID:19716732), (PMID:24439663), (PMID:24577121), (PMID:26903630)
UniProtKB PMID:17346965, PMID:19716732, PMID:21957163, PMID:24439663, PMID:24577121, PMID:26903630 MGI:MGI:5300112 NCBI chr 6:68,487,634...68,548,718 JBrowse link
G PGLYRP1 peptidoglycan recognition protein 1 ISO RGD PMID:11145837 RGD:724610 NCBI chr 6:52,318,544...52,322,504
Ensembl chr 6:52,317,411...52,322,654
JBrowse link
G PTGDS prostaglandin D2 synthase ISS UniProt GO_REF:0000024
regulation of circadian sleep/wake cycle, wakefulness term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HCRTR2 hypocretin receptor 2 ISS UniProt GO_REF:0000024 NCBI chr 7:25,830,544...25,929,640
Ensembl chr 7:25,826,294...25,929,702
JBrowse link
G PTGER3 prostaglandin E receptor 3 ISO RGD PMID:10923657 RGD:10043386 NCBI chr 6:141,958,955...142,160,437
Ensembl chr 6:141,958,954...142,161,292
JBrowse link
G PTGER4 prostaglandin E receptor 4 ISO RGD PMID:10923657 RGD:10043386 NCBI chr16:25,670,832...25,686,556
Ensembl chr16:25,670,862...25,686,552
JBrowse link
regulation of locomotor rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MTOR mechanistic target of rapamycin kinase IEA Ensembl GO_REF:0000107 NCBI chr 6:71,286,989...71,412,913
Ensembl chr 6:71,286,989...71,412,888
JBrowse link
G OPRL1 opioid related nociceptin receptor 1 ISO RGD PMID:16310969 RGD:9835023 NCBI chr17:62,905,700...62,913,018
Ensembl chr17:62,897,727...62,913,754
JBrowse link
G ZFHX3 zinc finger homeobox 3 ISO (MGI:MGI:5660827|PMID:26232227) UniProtKB PMID:26232227 MGI:MGI:5660827 NCBI chr 6:15,693,987...15,941,301
Ensembl chr 6:15,698,176...16,023,169
JBrowse link
regulation of progesterone secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GDF9 growth differentiation factor 9 IEA Ensembl GO_REF:0000107 NCBI chr 2:135,181,494...135,184,451
Ensembl chr 2:135,180,104...135,186,389
JBrowse link
rhythmic behavior term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHAT choline O-acetyltransferase ISO (MGI:MGI:3577822|PMID:15820692) MGI PMID:15820692 MGI:MGI:3577822 NCBI chr14:90,117,464...90,167,611
Ensembl chr14:90,117,464...90,167,611
JBrowse link
G EGR2 early growth response 2 IEA Ensembl GO_REF:0000107 NCBI chr14:66,280,665...66,291,308
Ensembl chr14:66,284,577...66,291,306
JBrowse link
ultradian rhythm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENOX1 ecto-NOX disulfide-thiol exchanger 1 IEA InterPro GO_REF:0000002 NCBI chr11:23,234,764...23,894,763
Ensembl chr11:23,237,697...23,894,727
JBrowse link
G ENOX2 ecto-NOX disulfide-thiol exchanger 2 IEA InterPro
Ensembl
GO_REF:0000002, GO_REF:0000107 NCBI chr  X:107,084,378...107,368,520
Ensembl chr  X:107,084,384...107,368,473
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16545
    rhythmic process 381
      circadian rhythm + 263
      ovulation cycle + 117
      ovulation cycle process + 73
      rhythmic behavior + 70
      ultradian rhythm + 2
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.