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ONTOLOGY REPORT - ANNOTATIONS


Term:positive regulation of viral process
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Accession:GO:0048524 term browser browse the term
Definition:Any process that activates or increases the frequency, rate or extent of a multi-organism process in which a virus is a participant.
Synonyms:narrow_synonym: activation of viral life cycle;   positive regulation of viral life cycle;   positive regulation of viral reproduction;   stimulation of viral life cycle;   up regulation of viral life cycle;   upregulation of viral life cycle


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positive regulation of viral process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rab7a RAB7A, member RAS oncogene family ISO (PMID:22072966) RGD PMID:22072966 NCBI chr 4:119,910,461...119,963,065
Ensembl chr 4:119,910,478...119,959,173
JBrowse link
G Stom stomatin ISO (MGI:MGI:5616479|PMID:25262680) RGD PMID:25262680 MGI:MGI:5616479 NCBI chr 3:14,515,576...14,538,199
Ensembl chr 3:14,514,868...14,538,241
JBrowse link
G Tmem250 transmembrane protein 250 ISO (PMID:21667337) RGD PMID:21667337 NCBI chr 3:3,590,783...3,594,475
Ensembl chr 3:3,590,783...3,594,475
JBrowse link
G Vps4a vacuolar protein sorting 4 homolog A IEA
ISO
GO_REF:0000107
(MGI:MGI:5619479|PMID:17940959)
Ensembl
RGD
PMID:17940959 GO_REF:0000107, MGI:MGI:5619479 NCBI chr19:39,230,050...39,243,298
Ensembl chr19:39,229,754...39,243,496
JBrowse link
G Vps4b vacuolar protein sorting 4 homolog B ISO (PMID:17940959)
(MGI:MGI:5619479|PMID:17940959)
RGD PMID:17940959 MGI:MGI:5619479 NCBI chr13:26,825,261...26,850,460
Ensembl chr13:26,825,261...26,850,460
JBrowse link
positive regulation by host of viral genome replication term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hspa8 heat shock protein family A (Hsp70) member 8 ISO (MGI:MGI:5787727|PMID:26581985) RGD PMID:26581985 MGI:MGI:5787727 NCBI chr 8:44,989,401...44,993,261
Ensembl chr 8:44,990,014...44,993,179
JBrowse link
G Nucks1 nuclear casein kinase and cyclin-dependent kinase substrate 1 ISO (PMID:25116364) RGD PMID:25116364 NCBI chr13:48,679,726...48,709,663
Ensembl chr13:48,679,774...48,705,575
JBrowse link
G Ppib peptidylprolyl isomerase B ISO (PMID:15989969) RGD PMID:15989969 NCBI chr 8:71,719,681...71,725,538
Ensembl chr 8:71,719,563...71,725,562
JBrowse link
G Stom stomatin ISO (MGI:MGI:5616479|PMID:25262680) RGD PMID:25262680 MGI:MGI:5616479 NCBI chr 3:14,515,576...14,538,199
Ensembl chr 3:14,514,868...14,538,241
JBrowse link
G Tbc1d20 TBC1 domain family, member 20 ISO (PMID:17686842) RGD PMID:17686842 NCBI chr 3:147,772,006...147,790,946
Ensembl chr 3:147,772,165...147,789,158
JBrowse link
G Vapa VAMP associated protein A ISO (PMID:19515777) RGD PMID:19515777 NCBI chr 9:113,300,831...113,331,872
Ensembl chr 9:113,300,832...113,331,319
JBrowse link
G Vapb VAMP associated protein B and C ISO (PMID:19515777) RGD PMID:19515777 NCBI chr 3:171,832,558...171,871,042
Ensembl chr 3:171,832,500...171,868,647
JBrowse link
G Ythdc2 YTH domain containing 2 ISO (PMID:21559518) RGD PMID:21559518 NCBI chr 1:182,072,386...182,141,399
Ensembl chr 1:182,085,899...182,140,570
JBrowse link
positive regulation by host of viral process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa2 annexin A2 ISO (PMID:25593157) RGD PMID:25593157 NCBI chr 8:75,687,134...75,723,589
Ensembl chr 8:75,687,100...75,723,594
JBrowse link
G Apoe apolipoprotein E ISO
IEA
(PMID:25122793)
GO_REF:0000107
RGD
Ensembl
PMID:25122793 GO_REF:0000107 NCBI chr 1:80,612,894...80,616,820
Ensembl chr 1:80,612,895...80,617,057
JBrowse link
G Cav2 caveolin 2 ISO (PMID:25556234) RGD PMID:25556234 NCBI chr 4:44,573,264...44,580,640
Ensembl chr 4:44,573,264...44,580,638
JBrowse link
G Ceacam1 CEA cell adhesion molecule 1 ISO MGI:MGI:2180785|MGI:MGI:3027072 (MGI:MGI:1098064|PMID:9343248), (MGI:MGI:2148352|PMID:11483763) RGD PMID:9343248, PMID:11483763 MGI:MGI:1098064, MGI:MGI:2148352 NCBI chr 1:82,327,955...82,344,345
Ensembl chr 1:82,327,955...82,344,345
JBrowse link
G Cfl1 cofilin 1 ISO (PMID:25556234) RGD PMID:25556234 NCBI chr 1:220,869,805...220,873,337
Ensembl chr 1:220,869,805...220,873,337
JBrowse link
G Csf1r colony stimulating factor 1 receptor IEA
ISO
GO_REF:0000107
UniProtKB:P01580 (MGI:MGI:4840165|PMID:20889566)
Ensembl
RGD
PMID:20889566 GO_REF:0000107, MGI:MGI:4840165 NCBI chr18:56,414,493...56,458,300
Ensembl chr18:56,414,488...56,458,300
JBrowse link
G Ifng interferon gamma ISO UniProtKB:P09581 (MGI:MGI:4840165|PMID:20889566) RGD PMID:20889566 MGI:MGI:4840165 NCBI chr 7:61,337,383...61,341,419
Ensembl chr 7:61,337,381...61,341,419
JBrowse link
G Igf2r insulin-like growth factor 2 receptor ISO (PMID:20889566) RGD PMID:20889566 NCBI chr 1:48,176,095...48,264,482
Ensembl chr 1:48,176,106...48,264,477
JBrowse link
G LOC100911237 zinc finger protein 420-like ISO (PMID:25556234) RGD PMID:25556234 NCBI chr 1:31,494,043...31,519,034 JBrowse link
G Pc pyruvate carboxylase ISO (PMID:23861867) RGD PMID:23861867 NCBI chr 1:219,759,157...219,859,854
Ensembl chr 1:219,759,183...219,859,848
JBrowse link
G Ppib peptidylprolyl isomerase B ISO (PMID:15989969) RGD PMID:15989969 NCBI chr 8:71,719,681...71,725,538
Ensembl chr 8:71,719,563...71,725,562
JBrowse link
positive regulation by host of viral release from host cell term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cav2 caveolin 2 ISO
IEA
(PMID:25556234)
GO_REF:0000107
RGD
Ensembl
PMID:25556234 GO_REF:0000107 NCBI chr 4:44,573,264...44,580,640
Ensembl chr 4:44,573,264...44,580,638
JBrowse link
G LOC100911237 zinc finger protein 420-like ISO (PMID:25556234) RGD PMID:25556234 NCBI chr 1:31,494,043...31,519,034 JBrowse link
G Pc pyruvate carboxylase ISO
IEA
(PMID:23861867)
GO_REF:0000107
RGD
Ensembl
PMID:23861867 GO_REF:0000107 NCBI chr 1:219,759,157...219,859,854
Ensembl chr 1:219,759,183...219,859,848
JBrowse link
G Vapa VAMP associated protein A ISO (PMID:19515777) RGD PMID:19515777 NCBI chr 9:113,300,831...113,331,872
Ensembl chr 9:113,300,832...113,331,319
JBrowse link
G Vapb VAMP associated protein B and C ISO (PMID:19515777) RGD PMID:19515777 NCBI chr 3:171,832,558...171,871,042
Ensembl chr 3:171,832,500...171,868,647
JBrowse link
positive regulation by host of viral transcription term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chd1 chromodomain helicase DNA binding protein 1 ISO (PMID:25297984) RGD PMID:25297984 NCBI chr 1:57,692,828...57,756,762
Ensembl chr 1:57,692,836...57,755,485
JBrowse link
G Ctdp1 CTD phosphatase subunit 1 ISO (PMID:15723517) RGD PMID:15723517 NCBI chr18:76,922,913...76,985,095
Ensembl chr18:76,922,934...76,984,203
JBrowse link
G Ep300 E1A binding protein p300 ISO (PMID:16687403) RGD PMID:16687403 NCBI chr 7:122,818,194...122,889,055
Ensembl chr 7:122,818,975...122,861,296
JBrowse link
G Fkbp8 FKBP prolyl isomerase 8 ISO (PMID:26748656) RGD PMID:26748656 NCBI chr16:20,645,956...20,652,890
Ensembl chr16:20,645,957...20,652,889
JBrowse link
G Gtf2b general transcription factor IIB ISS
ISO
IEA
GO_REF:0000024
(PMID:24441171)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:24441171 GO_REF:0000024, GO_REF:0000107 NCBI chr 2:248,709,433...248,727,741
Ensembl chr 2:248,715,281...248,727,741
JBrowse link
G Hpn hepsin IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:15614436)
Ensembl
UniProt
RGD
PMID:15614436 GO_REF:0000024, GO_REF:0000107 NCBI chr 1:89,534,112...89,549,575
Ensembl chr 1:89,534,106...89,543,967
JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit ISO (PMID:2833704) RGD PMID:2833704 NCBI chr 5:114,011,184...114,014,277
Ensembl chr 5:114,011,189...114,014,277
JBrowse link
G Lef1 lymphoid enhancer binding factor 1 IEA
ISO
GO_REF:0000107
(PMID:7657162)
Ensembl
RGD
PMID:7657162 GO_REF:0000107 NCBI chr 2:236,232,115...236,345,061
Ensembl chr 2:236,233,239...236,345,056
JBrowse link
G Nucks1 nuclear casein kinase and cyclin-dependent kinase substrate 1 ISO UniProtKB:P04608 (PMID:25116364) RGD PMID:25116364 NCBI chr13:48,679,726...48,709,663
Ensembl chr13:48,679,774...48,705,575
JBrowse link
G Rrp1b ribosomal RNA processing 1B ISO (PMID:26311876) RGD PMID:26311876 NCBI chr20:10,844,234...10,869,830
Ensembl chr20:10,844,266...10,869,821
JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 ISO
IEA
(PMID:16687403)
GO_REF:0000107
RGD
Ensembl
PMID:16687403 GO_REF:0000107 NCBI chr 8:22,648,323...22,739,468
Ensembl chr 8:22,648,323...22,739,468
JBrowse link
G Smarcb1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 ISO (PMID:16687403) RGD PMID:16687403 NCBI chr20:13,679,955...13,702,821
Ensembl chr20:13,680,716...13,704,931
JBrowse link
G Snw1 SNW domain containing 1 ISO (PMID:15905409), (PMID:19818711) RGD PMID:15905409, PMID:19818711 NCBI chr 6:111,483,698...111,507,782
Ensembl chr 6:111,483,703...111,507,782
JBrowse link
G Sp1 Sp1 transcription factor ISO (PMID:2833704) RGD PMID:2833704 NCBI chr 7:144,014,173...144,044,635
Ensembl chr 7:144,014,173...144,044,629
JBrowse link
G Taf11 TATA-box binding protein associated factor 11 ISO (PMID:9108034) RGD PMID:9108034 NCBI chr20:7,476,648...7,484,417
Ensembl chr20:7,476,651...7,482,747
JBrowse link
G Tfap4 transcription factor AP-4 ISO (PMID:2833704) RGD PMID:2833704 NCBI chr10:11,204,616...11,222,975
Ensembl chr10:11,206,226...11,223,370
JBrowse link
G Zfp639 zinc finger protein 639 ISO
ISS
(PMID:20484494)
GO_REF:0000024
RGD
UniProt
PMID:20484494 GO_REF:0000024 NCBI chr 2:118,906,479...118,917,491
Ensembl chr 2:118,910,587...118,916,563
JBrowse link
positive regulation by virus of viral protein levels in host cell term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddb1 damage-specific DNA binding protein 1 ISO
IEA
(PMID:23137809)
GO_REF:0000107
RGD
Ensembl
PMID:23137809 GO_REF:0000107 NCBI chr 1:226,657,561...226,683,356
Ensembl chr 1:226,657,561...226,683,347
JBrowse link
G Hacd3 3-hydroxyacyl-CoA dehydratase 3 ISO (PMID:18160438) RGD PMID:18160438 NCBI chr 8:70,471,572...70,509,874
Ensembl chr 8:70,471,572...70,509,874
JBrowse link
G Stau1 staufen double-stranded RNA binding protein 1 ISO (PMID:23907398) RGD PMID:23907398 NCBI chr 3:163,703,204...163,748,996
Ensembl chr 3:163,703,204...163,748,996
JBrowse link
G Tbc1d20 TBC1 domain family, member 20 ISO (PMID:17686842) RGD PMID:17686842 NCBI chr 3:147,772,006...147,790,946
Ensembl chr 3:147,772,165...147,789,158
JBrowse link
positive regulation of intracellular transport of viral material term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fmr1 FMRP translational regulator 1 IEA
ISO
GO_REF:0000107
(PMID:24514761)
Ensembl
RGD
PMID:24514761 GO_REF:0000107 NCBI chr  X:154,684,924...154,722,369
Ensembl chr  X:154,684,935...154,722,314
JBrowse link
positive regulation of single stranded viral RNA replication via double stranded DNA intermediate term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Top2a DNA topoisomerase II alpha IEA
ISO
GO_REF:0000107
(PMID:16712776)
Ensembl
RGD
PMID:16712776 GO_REF:0000107 NCBI chr10:86,901,467...86,930,947
Ensembl chr10:86,901,007...86,932,154
JBrowse link
G Top2b DNA topoisomerase II beta ISO (PMID:16712776) RGD PMID:16712776 NCBI chr15:10,262,972...10,319,741
Ensembl chr15:10,262,651...10,320,233
JBrowse link
positive regulation of viral budding via host ESCRT complex term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tsg101 tumor susceptibility 101 ISO (PMID:11595185), (PMID:15218037) RGD PMID:11595185, PMID:15218037 NCBI chr 1:102,941,151...102,971,017
Ensembl chr 1:102,941,231...102,970,950
JBrowse link
G Vps37b VPS37B subunit of ESCRT-I ISO (PMID:15218037) RGD PMID:15218037 NCBI chr12:37,984,790...38,023,369
Ensembl chr12:37,984,790...38,023,368
JBrowse link
G Vps4a vacuolar protein sorting 4 homolog A ISO (PMID:17940959), (PMID:24878737) RGD PMID:17940959, PMID:24878737 NCBI chr19:39,230,050...39,243,298
Ensembl chr19:39,229,754...39,243,496
JBrowse link
positive regulation of viral entry into host cell term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bsg basigin (Ok blood group) ISO (PMID:11353871), (PMID:15688292), (PMID:29739904) RGD PMID:11353871, PMID:15688292, PMID:29739904 NCBI chr 7:12,875,536...12,882,753
Ensembl chr 7:12,875,537...12,882,753
JBrowse link
G Cd4 Cd4 molecule ISO (PMID:24942581) RGD PMID:24942581 NCBI chr 4:157,381,862...157,408,357
Ensembl chr 4:157,383,052...157,408,176
JBrowse link
G Cd74 CD74 molecule ISO (PMID:24942581) RGD PMID:24942581 NCBI chr18:56,071,420...56,080,851
Ensembl chr18:56,071,478...56,080,849
JBrowse link
G Lgals1 galectin 1 ISO (PMID:21670307) RGD PMID:21670307 NCBI chr 7:120,153,184...120,156,290
Ensembl chr 7:120,153,184...120,156,289
JBrowse link
G Lgals9 galectin 9 ISO (PMID:21670307) RGD PMID:21670307 NCBI chr10:64,737,022...64,760,195
Ensembl chr10:64,737,022...64,760,201
JBrowse link
G Nectin1 nectin cell adhesion molecule 1 ISO (PMID:11277703) RGD PMID:11277703 NCBI chr 8:48,094,233...48,198,499
Ensembl chr 8:48,094,673...48,157,305
JBrowse link
G P4hb prolyl 4-hydroxylase subunit beta ISO (PMID:21670307) RGD PMID:21670307 NCBI chr10:109,736,459...109,748,070
Ensembl chr10:109,736,458...109,747,987
JBrowse link
G RT1-Db1 RT1 class II, locus Db1 ISO (PMID:24942581) RGD PMID:24942581 NCBI chr20:4,087,621...4,097,190
Ensembl chr20:4,087,618...4,097,190
JBrowse link
G Tmprss2 transmembrane serine protease 2 ISO (PMID:21068237), (PMID:24227843) RGD PMID:21068237, PMID:24227843 NCBI chr11:38,063,914...38,103,406
Ensembl chr11:38,063,915...38,103,290
JBrowse link
G Trim11 tripartite motif-containing 11 ISO (PMID:18248090)
(MGI:MGI:5545996|PMID:18248090)
RGD PMID:18248090 MGI:MGI:5545996 NCBI chr10:45,322,199...45,335,030
Ensembl chr10:45,322,248...45,335,030
JBrowse link
G Trim21 tripartite motif-containing 21 ISO (MGI:MGI:5545996|PMID:18248090) RGD PMID:18248090 MGI:MGI:5545996 NCBI chr 1:167,686,148...167,708,735
Ensembl chr 1:167,686,173...167,708,714
JBrowse link
G Trim38 tripartite motif containing 38 ISO (PMID:18248090) RGD PMID:18248090 NCBI chr17:43,600,006...43,607,879 JBrowse link
positive regulation of viral genome replication term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adar adenosine deaminase, RNA-specific IEA
ISO
ISS
GO_REF:0000107
(PMID:18362360), (PMID:19651874)
GO_REF:0000024
(MGI:MGI:5447606|PMID:18362360)
Ensembl
RGD
UniProt
PMID:18362360, PMID:19651874 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5447606 NCBI chr 2:189,045,551...189,085,448
Ensembl chr 2:189,062,443...189,083,236
JBrowse link
G Adarb1 adenosine deaminase, RNA-specific, B1 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:21289159)
Ensembl
UniProt
RGD
PMID:21289159 GO_REF:0000024, GO_REF:0000107 NCBI chr20:11,972,352...12,101,022
Ensembl chr20:11,972,381...12,101,047
JBrowse link
G Cnot7 CCR4-NOT transcription complex, subunit 7 ISO (PMID:23386060) RGD PMID:23386060 NCBI chr16:54,899,452...54,918,616
Ensembl chr16:54,899,452...54,918,613
JBrowse link
G Ddb1 damage-specific DNA binding protein 1 ISO
IEA
(PMID:23137809)
GO_REF:0000107
RGD
Ensembl
PMID:23137809 GO_REF:0000107 NCBI chr 1:226,657,561...226,683,356
Ensembl chr 1:226,657,561...226,683,347
JBrowse link
G Ddx3x DEAD-box helicase 3, X-linked ISO (PMID:20862261) RGD PMID:20862261 NCBI chr  X:10,400,363...10,414,010
Ensembl chr  X:10,400,366...10,413,995
JBrowse link
G Fkbp6 FKBP prolyl isomerase 6 ISO (PMID:26567527) RGD PMID:26567527 NCBI chr12:24,365,941...24,438,088
Ensembl chr12:24,367,199...24,438,019
JBrowse link
G Hacd3 3-hydroxyacyl-CoA dehydratase 3 ISO (PMID:18160438) RGD PMID:18160438 NCBI chr 8:70,471,572...70,509,874
Ensembl chr 8:70,471,572...70,509,874
JBrowse link
G Larp1 La ribonucleoprotein 1, translational regulator ISO (PMID:26735137) RGD PMID:26735137 NCBI chr10:43,435,738...43,501,186
Ensembl chr10:43,446,526...43,498,066
JBrowse link
G Notch1 notch receptor 1 ISO (MGI:MGI:5693363|PMID:21191019) RGD PMID:21191019 MGI:MGI:5693363 NCBI chr 3:3,905,562...3,951,015
Ensembl chr 3:3,905,453...3,951,025
JBrowse link
G Nr5a2 nuclear receptor subfamily 5, group A, member 2 ISO (PMID:19264593) RGD PMID:19264593 NCBI chr13:53,750,470...53,870,288
Ensembl chr13:53,750,473...53,870,428
JBrowse link
G Pabpc1 poly(A) binding protein, cytoplasmic 1 ISO (PMID:26735137) RGD PMID:26735137 NCBI chr 7:75,409,581...75,421,874
Ensembl chr 7:75,409,581...75,422,268
JBrowse link
G Pde12 phosphodiesterase 12 IEA
ISO
GO_REF:0000107
(PMID:15231837)
Ensembl
RGD
PMID:15231837 GO_REF:0000107 NCBI chr16:2,357,028...2,367,069
Ensembl chr16:2,357,028...2,367,253
JBrowse link
G Pkn2 protein kinase N2 ISO
IEA
(PMID:15364941)
GO_REF:0000107
RGD
Ensembl
PMID:15364941 GO_REF:0000107 NCBI chr 2:248,735,699...248,840,735
Ensembl chr 2:248,735,699...248,840,735
JBrowse link
G Ppara peroxisome proliferator activated receptor alpha ISO (PMID:22479552) RGD PMID:22479552 NCBI chr 7:126,618,872...126,687,282
Ensembl chr 7:126,619,196...126,681,752
JBrowse link
G Ppia peptidylprolyl isomerase A ISO (PMID:19932913) RGD PMID:19932913 NCBI chr14:86,673,775...86,677,443
Ensembl chr14:86,673,775...86,677,443
JBrowse link
G Ppid peptidylprolyl isomerase D ISO (PMID:19932913) RGD PMID:19932913 NCBI chr 2:178,354,830...178,366,843
Ensembl chr 2:178,354,890...178,366,685
JBrowse link
G Ppie peptidylprolyl isomerase E ISO (PMID:19932913) RGD PMID:19932913 NCBI chr 5:140,822,141...140,835,244
Ensembl chr 5:140,822,141...140,834,959
JBrowse link
G Ppih peptidylprolyl isomerase H ISO (PMID:19932913) RGD PMID:19932913 NCBI chr 5:138,343,934...138,361,743
Ensembl chr 5:138,352,916...138,361,702
JBrowse link
G Rad23a RAD23 homolog A, nucleotide excision repair protein ISO (PMID:20614012) RGD PMID:20614012 NCBI chr19:25,949,488...25,956,677
Ensembl chr19:25,949,490...25,955,391
JBrowse link
G Srpk1 SRSF protein kinase 1 ISO (PMID:20498328) RGD PMID:20498328 NCBI chr20:5,829,412...5,865,877
Ensembl chr20:5,831,119...5,865,854
JBrowse link
G Srpk2 SRSF protein kinase 2 ISO (PMID:20498328) RGD PMID:20498328 NCBI chr 4:7,994,025...8,187,455
Ensembl chr 4:8,066,737...8,185,935
JBrowse link
G Stau1 staufen double-stranded RNA binding protein 1 ISO (PMID:23907398) RGD PMID:23907398 NCBI chr 3:163,703,204...163,748,996
Ensembl chr 3:163,703,204...163,748,996
JBrowse link
G Tarbp2 TARBP2 subunit of RISC loading complex ISO
ISS
(PMID:11641396)
GO_REF:0000024
RGD
UniProt
PMID:11641396 GO_REF:0000024 NCBI chr 7:144,121,688...144,126,860
Ensembl chr 7:144,121,744...144,126,857
JBrowse link
G Tmem39a transmembrane protein 39a ISO (PMID:31849860) RGD PMID:31849860 NCBI chr11:64,723,181...64,752,514
Ensembl chr11:64,723,186...64,752,544
JBrowse link
G Trim38 tripartite motif containing 38 ISO (MGI:MGI:5441682|PMID:22539786) RGD PMID:22539786 MGI:MGI:5441682 NCBI chr17:43,600,006...43,607,879 JBrowse link
G Vapb VAMP associated protein B and C ISO
ISS
(PMID:16227268)
GO_REF:0000024
RGD
UniProt
PMID:16227268 GO_REF:0000024 NCBI chr 3:171,832,558...171,871,042
Ensembl chr 3:171,832,500...171,868,647
JBrowse link
positive regulation of viral life cycle term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa2 annexin A2 ISO (PMID:25593157) RGD PMID:25593157 NCBI chr 8:75,687,134...75,723,589
Ensembl chr 8:75,687,100...75,723,594
JBrowse link
G Kpna2 karyopherin subunit alpha 2 ISO (MGI:MGI:5898166|PMID:28189564)
(PMID:28189564)
RGD PMID:28189564 MGI:MGI:5898166 NCBI chr10:95,200,029...95,212,111
Ensembl chr10:95,200,030...95,212,111
JBrowse link
G Kpna6 karyopherin subunit alpha 6 ISO MGI:MGI:3856636 (MGI:MGI:5898166|PMID:28189564)
(PMID:28189564)
RGD PMID:28189564 MGI:MGI:5898166 NCBI chr 5:147,852,738...147,867,600
Ensembl chr 5:147,850,275...147,886,615
JBrowse link
G Vps4a vacuolar protein sorting 4 homolog A ISO (PMID:11595185), (PMID:16193069), (PMID:17940959) RGD PMID:11595185, PMID:16193069, PMID:17940959 NCBI chr19:39,230,050...39,243,298
Ensembl chr19:39,229,754...39,243,496
JBrowse link
G Vps4b vacuolar protein sorting 4 homolog B ISO (PMID:16193069) RGD PMID:16193069 NCBI chr13:26,825,261...26,850,460
Ensembl chr13:26,825,261...26,850,460
JBrowse link
positive regulation of viral release from host cell term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chmp2a charged multivesicular body protein 2A ISO UniProtKB:Q9UQN3|UniProtKB:Q9Y3E7 (PMID:14505570), (PMID:23051622) RGD PMID:14505570, PMID:23051622 NCBI chr 1:65,540,808...65,543,708
Ensembl chr 1:65,541,322...65,543,707
JBrowse link
G Chmp2b charged multivesicular body protein 2B ISO UniProtKB:O43633|UniProtKB:Q9Y3E7 (PMID:23051622) RGD PMID:23051622 NCBI chr11:2,666,405...2,692,213
Ensembl chr11:2,665,285...2,692,198
JBrowse link
G Chmp3 charged multivesicular body protein 3 ISO UniProtKB:O43633|UniProtKB:Q9UQN3 (PMID:14505570), (PMID:23051622) RGD PMID:14505570, PMID:23051622 NCBI chr 4:99,449,213...99,496,156
Ensembl chr 4:99,449,111...99,494,423
JBrowse link
G Chmp4b charged multivesicular body protein 4B ISO (PMID:14505570) RGD PMID:14505570 NCBI chr 3:150,188,275...150,227,453
Ensembl chr 3:150,188,455...150,227,405
JBrowse link
G Chmp4c charged multivesicular body protein 4C IEA
ISO
GO_REF:0000107
(PMID:14505570)
Ensembl
RGD
PMID:14505570 GO_REF:0000107 NCBI chr 2:93,574,554...93,641,497
Ensembl chr 2:93,574,559...93,641,497
JBrowse link
G Ddb1 damage-specific DNA binding protein 1 ISO
IEA
(PMID:23137809)
GO_REF:0000107
RGD
Ensembl
PMID:23137809 GO_REF:0000107 NCBI chr 1:226,657,561...226,683,356
Ensembl chr 1:226,657,561...226,683,347
JBrowse link
G Tsg101 tumor susceptibility 101 ISO (PMID:11595185), (PMID:15218037) RGD PMID:11595185, PMID:15218037 NCBI chr 1:102,941,151...102,971,017
Ensembl chr 1:102,941,231...102,970,950
JBrowse link
G Vps37b VPS37B subunit of ESCRT-I ISO (PMID:15218037) RGD PMID:15218037 NCBI chr12:37,984,790...38,023,369
Ensembl chr12:37,984,790...38,023,368
JBrowse link
G Vps4a vacuolar protein sorting 4 homolog A ISO (PMID:11595185) RGD PMID:11595185 NCBI chr19:39,230,050...39,243,298
Ensembl chr19:39,229,754...39,243,496
JBrowse link
G Vps4b vacuolar protein sorting 4 homolog B ISO (PMID:14505570) RGD PMID:14505570 NCBI chr13:26,825,261...26,850,460
Ensembl chr13:26,825,261...26,850,460
JBrowse link
positive regulation of viral transcription term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhx9 DExH-box helicase 9 ISO (PMID:11096080) RGD PMID:11096080 NCBI chr13:70,885,503...70,922,278
Ensembl chr13:70,885,504...70,922,245
JBrowse link
G Gtf2b general transcription factor IIB ISO (PMID:14644612) RGD PMID:14644612 NCBI chr 2:248,709,433...248,727,741
Ensembl chr 2:248,715,281...248,727,741
JBrowse link
G Map3k1 mitogen-activated protein kinase kinase kinase 1 IDA from cytomegalovirus immediate-early promoter RGD PMID:11746500 RGD:2293493 NCBI chr 2:43,329,516...43,393,203
Ensembl chr 2:43,329,516...43,393,207
JBrowse link
G Mdfic MyoD family inhibitor domain containing ISO
IBA
(PMID:10671520)
PMID:21873635
RGD PMID:10671520, PMID:21873635 RGD:13792537 NCBI chr 4:42,202,546...42,282,499
Ensembl chr 4:42,202,838...42,282,496
JBrowse link
G Notch1 notch receptor 1 ISO (MGI:MGI:5693363|PMID:21191019) RGD PMID:21191019 MGI:MGI:5693363 NCBI chr 3:3,905,562...3,951,015
Ensembl chr 3:3,905,453...3,951,025
JBrowse link
G Pfn1 profilin 1 IMP RGD PMID:12740026 RGD:2324854 NCBI chr10:57,273,003...57,275,708
Ensembl chr10:57,273,005...57,275,708
JBrowse link
G Rsf1 remodeling and spacing factor 1 ISO (PMID:11788598) RGD PMID:11788598 NCBI chr 1:162,549,222...162,671,962
Ensembl chr 1:162,549,420...162,662,170
JBrowse link
positive regulation of viral translation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhx9 DExH-box helicase 9 ISO (PMID:16680162) RGD PMID:16680162 NCBI chr13:70,885,503...70,922,278
Ensembl chr13:70,885,504...70,922,245
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20017
    positive regulation of biological process 6667
      positive regulation of viral process 91
        positive regulation by host of viral process + 18
        positive regulation by virus of viral protein levels in host cell 4
        positive regulation of transformation of host cell by virus 0
        positive regulation of viral life cycle + 62
        positive regulation of viral transcription + 23
        positive regulation of viral translation 1
Path 2
Term Annotations click to browse term
  biological_process 20017
    biological regulation 13767
      regulation of biological process 13081
        regulation of symbiotic process 226
          regulation of viral process 209
            positive regulation of viral process 91
              positive regulation by host of viral process + 18
              positive regulation by virus of viral protein levels in host cell 4
              positive regulation of transformation of host cell by virus 0
              positive regulation of viral life cycle + 62
              positive regulation of viral transcription + 23
              positive regulation of viral translation 1
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.