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ONTOLOGY REPORT - ANNOTATIONS


Term:negative regulation of viral process
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Accession:GO:0048525 term browser browse the term
Definition:Any process that stops, prevents, or reduces the frequency, rate or extent of a multi-organism process in which a virus is a participant.
Synonyms:narrow_synonym: down regulation of viral life cycle;   downregulation of viral life cycle;   inhibition of viral life cycle;   negative regulation of viral life cycle;   negative regulation of viral reproduction


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negative regulation of viral process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APCS amyloid P component, serum ISO (PMID:23544079) BHF-UCL PMID:23544079 NCBI chr 1:134,937,472...134,938,512
Ensembl chr 1:138,734,046...138,735,093
JBrowse link
G APOBEC3F apolipoprotein B mRNA editing enzyme catalytic subunit 3F ISO (PMID:17121840) HGNC PMID:17121840 NCBI chr22:19,950,036...19,966,002 JBrowse link
G APOBEC3G apolipoprotein B mRNA editing enzyme catalytic subunit 3G ISO (PMID:17121840) HGNC PMID:17121840 NCBI chr22:19,977,184...19,994,769 JBrowse link
G APOBEC3H apolipoprotein B mRNA editing enzyme catalytic subunit 3H ISO (PMID:18827027) UniProtKB PMID:18827027 NCBI chr22:20,003,585...20,010,741
Ensembl chr22:37,821,315...37,828,153
JBrowse link
G CREBBP CREB binding protein ISO (MGI:MGI:2151262|PMID:11583620) CAFA PMID:11583620 MGI:MGI:2151262 NCBI chr16:2,645,445...2,800,975
Ensembl chr16:3,820,519...3,974,206
JBrowse link
G LTF lactotransferrin ISO (PMID:25193851) AgBase PMID:25193851 NCBI chr 3:46,337,738...46,367,476
Ensembl chr 3:47,442,440...47,471,532
JBrowse link
G MBL2 mannose binding lectin 2 ISO (PMID:23544079) BHF-UCL PMID:23544079 NCBI chr10:49,401,364...49,409,328
Ensembl chr10:51,527,758...51,543,432
JBrowse link
modulation by host of viral RNA-binding transcription factor activity term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUCKS1 nuclear casein kinase and cyclin dependent kinase substrate 1 ISO (PMID:25116364) ParkinsonsUK-UCL PMID:25116364 NCBI chr 1:181,322,760...181,359,321
Ensembl chr 1:185,606,796...185,642,984
JBrowse link
modulation by host of viral transcription term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PSMC3 proteasome 26S subunit, ATPase 3 ISO (PMID:2194290), (PMID:8419915) GO_Central PMID:2194290, PMID:8419915 NCBI chr11:47,366,986...47,374,677
Ensembl chr11:47,920,295...47,927,654
JBrowse link
negative regulation by host of viral genome replication term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCL8 C-C motif chemokine ligand 8 ISO (PMID:20181935) ARUK-UCL PMID:20181935 NCBI chr17:22,468,080...22,470,443
Ensembl chr17:22,761,064...22,763,933
JBrowse link
G CCNK cyclin K ISO (PMID:21555514) CACAO PMID:21555514 NCBI chr14:80,105,372...80,136,511
Ensembl chr14:99,438,814...99,480,842
JBrowse link
G CEACAM1 CEA cell adhesion molecule 1 ISO (MGI:MGI:55926|PMID:6327825) MGI PMID:6327825 MGI:MGI:55926 NCBI chr19:39,395,550...39,417,063 JBrowse link
G DDX3X DEAD-box helicase 3 X-linked ISO (PMID:24380861) AgBase PMID:24380861 NCBI chr  X:33,780,381...33,796,829
Ensembl chr  X:41,475,116...41,505,837
JBrowse link
G EIF2AK4 eukaryotic translation initiation factor 2 alpha kinase 4 ISO (MGI:MGI:5700304|PMID:16601681) UniProtKB PMID:16601681 MGI:MGI:5700304 NCBI chr15:18,871,867...18,973,380
Ensembl chr15:37,120,044...37,229,211
JBrowse link
G PRKN parkin RBR E3 ubiquitin protein ligase ISO (PMID:25244949) AgBase PMID:25244949 NCBI chr 6:159,293,016...160,679,106
Ensembl chr 6:164,314,990...165,678,770
JBrowse link
G VAPA VAMP associated protein A ISO (PMID:19515777) AgBase PMID:19515777 NCBI chr18:4,329,479...4,373,047
Ensembl chr18:6,612,105...6,637,829
JBrowse link
G VAPB VAMP associated protein B and C ISO (PMID:19515777) AgBase PMID:19515777 NCBI chr20:54,736,035...54,798,155
Ensembl chr20:56,010,782...56,064,363
JBrowse link
G ZBED1 zinc finger BED-type containing 1 ISO (PMID:25210186) UniProt PMID:25210186 Ensembl chr  X:2,441,985...2,444,069 JBrowse link
G ZC3H12A zinc finger CCCH-type containing 12A ISO (PMID:23355615) UniProtKB PMID:23355615 NCBI chr 1:36,743,341...36,753,261
Ensembl chr 1:38,093,917...38,103,556
JBrowse link
negative regulation by host of viral glycoprotein metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APCS amyloid P component, serum ISO (PMID:23544079) BHF-UCL PMID:23544079 NCBI chr 1:134,937,472...134,938,512
Ensembl chr 1:138,734,046...138,735,093
JBrowse link
G PTX3 pentraxin 3 ISO (PMID:23544079) BHF-UCL PMID:23544079 NCBI chr 3:154,485,470...154,492,293
Ensembl chr 3:162,537,577...162,543,652
JBrowse link
negative regulation by host of viral process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CEACAM1 CEA cell adhesion molecule 1 ISO (MGI:MGI:3848729|PMID:19358828)
(MGI:MGI:1098064|PMID:9343248)
(MGI:MGI:2148352|PMID:11483763)
MGI PMID:9343248, PMID:11483763, PMID:19358828 MGI:MGI:1098064, MGI:MGI:2148352, MGI:MGI:3848729 NCBI chr19:39,395,550...39,417,063 JBrowse link
G LTF lactotransferrin ISO (PMID:12522210) AgBase PMID:12522210 NCBI chr 3:46,337,738...46,367,476
Ensembl chr 3:47,442,440...47,471,532
JBrowse link
negative regulation by host of viral release from host cell term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G VAPB VAMP associated protein B and C ISO (PMID:19515777) AgBase PMID:19515777 NCBI chr20:54,736,035...54,798,155
Ensembl chr20:56,010,782...56,064,363
JBrowse link
negative regulation by host of viral transcription term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCL5 C-C motif chemokine ligand 5 ISO (PMID:10841574) UniProtKB PMID:10841574 NCBI chr17:20,915,198...20,923,530
Ensembl chr17:21,210,798...21,219,172
JBrowse link
G HDAC1 histone deacetylase 1 ISO (PMID:16540471) UniProtKB PMID:16540471 NCBI chr 1:31,578,373...31,619,970
Ensembl chr 1:32,585,791...32,626,410
JBrowse link
G HMGA2 high mobility group AT-hook 2 ISO (PMID:17005673) UniProtKB PMID:17005673 NCBI chr12:22,954,946...23,096,623 JBrowse link
G HMOX1 heme oxygenase 1 ISO (PMID:25086213) AgBase PMID:25086213 NCBI chr22:16,388,368...16,401,289
Ensembl chr22:34,230,825...34,244,063
JBrowse link
G INPP5K inositol polyphosphate-5-phosphatase K ISO (PMID:18774950) UniProtKB PMID:18774950 NCBI chr17:1,477,511...1,499,765
Ensembl chr17:1,377,312...1,399,373
JBrowse link
G JUN Jun proto-oncogene, AP-1 transcription factor subunit ISO (PMID:2833704) UniProtKB PMID:2833704 NCBI chr 1:58,042,794...58,045,536 JBrowse link
G POU2F3 POU class 2 homeobox 3 ISO (PMID:14645924) UniProtKB PMID:14645924 NCBI chr11:115,075,399...115,156,307
Ensembl chr11:119,001,408...119,082,531
JBrowse link
G REST RE1 silencing transcription factor ISO (PMID:17555596) UniProtKB PMID:17555596 NCBI chr 4:66,984,466...67,012,301
Ensembl chr 4:73,526,085...73,582,242
JBrowse link
G TARDBP TAR DNA binding protein ISO (PMID:7745706) BHF-UCL PMID:7745706 NCBI chr 1:9,775,084...9,786,710
Ensembl chr 1:10,996,006...11,008,732
JBrowse link
G TFAP4 transcription factor AP-4 ISO (PMID:14645924), (PMID:16540471) UniProtKB PMID:14645924, PMID:16540471 NCBI chr16:3,176,129...3,226,404
Ensembl chr16:4,348,929...4,368,525
JBrowse link
G ZNF639 zinc finger protein 639 ISO (PMID:20484494) UniProtKB PMID:20484494 NCBI chr 3:176,353,400...176,366,142
Ensembl chr 3:184,533,061...184,539,270
JBrowse link
negative regulation by virus of viral protein levels in host cell term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G STAT1 signal transducer and activator of transcription 1 ISO (PMID:15825084) AgBase PMID:15825084 NCBI chr2B:78,270,642...78,316,074
Ensembl chr2B:196,186,906...196,232,280
JBrowse link
G VAPB VAMP associated protein B and C ISO (PMID:19515777) AgBase PMID:19515777 NCBI chr20:54,736,035...54,798,155
Ensembl chr20:56,010,782...56,064,363
JBrowse link
negative regulation of intracellular transport of viral material term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BST2 bone marrow stromal cell antigen 2 ISO (MGI:MGI:5437427|PMID:20686043)
(PMID:19036818), (PMID:20686043), (PMID:20943977)
(MGI:MGI:5437405|PMID:22284121), (MGI:MGI:5448513|PMID:21919738)
UniProtKB PMID:19036818, PMID:20686043, PMID:20943977, PMID:21919738, PMID:22284121 MGI:MGI:5437405, MGI:MGI:5437427, MGI:MGI:5448513 NCBI chr19:16,890,257...16,892,989
Ensembl chr19:17,863,991...17,866,728
JBrowse link
G MX1 MX dynamin like GTPase 1 ISO (PMID:20167191) AgBase PMID:20167191 NCBI chr21:27,756,768...27,795,307
Ensembl chr21:41,095,928...41,123,019
JBrowse link
G TRIM15 tripartite motif containing 15 ISO (PMID:18248090) UniProtKB PMID:18248090 NCBI chr 6:29,939,261...29,949,706
Ensembl chr 6:30,610,348...30,619,826
JBrowse link
negative regulation of single stranded viral RNA replication via double stranded DNA intermediate term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOBEC3D apolipoprotein B mRNA editing enzyme catalytic subunit 3D ISO (PMID:21835787) UniProtKB PMID:21835787 NCBI chr22:19,931,452...19,942,829 JBrowse link
G APOBEC3F apolipoprotein B mRNA editing enzyme catalytic subunit 3F ISO (PMID:17121840), (PMID:21835787) HGNC PMID:17121840, PMID:21835787 NCBI chr22:19,950,036...19,966,002 JBrowse link
G APOBEC3G apolipoprotein B mRNA editing enzyme catalytic subunit 3G ISO (PMID:16571802), (PMID:17121840), (PMID:21835787) UniProtKB PMID:16571802, PMID:17121840, PMID:21835787 NCBI chr22:19,977,184...19,994,769 JBrowse link
G APOBEC3H apolipoprotein B mRNA editing enzyme catalytic subunit 3H ISO (PMID:18779051), (PMID:21835787) UniProtKB PMID:18779051, PMID:21835787 NCBI chr22:20,003,585...20,010,741
Ensembl chr22:37,821,315...37,828,153
JBrowse link
G HMGA2 high mobility group AT-hook 2 ISO (PMID:17005673) UniProtKB PMID:17005673 NCBI chr12:22,954,946...23,096,623 JBrowse link
G INPP5K inositol polyphosphate-5-phosphatase K ISO (PMID:18774950) UniProtKB PMID:18774950 NCBI chr17:1,477,511...1,499,765
Ensembl chr17:1,377,312...1,399,373
JBrowse link
G MORC2 MORC family CW-type zinc finger 2 ISO (MGI:MGI:6271895|PMID:29728365)
(PMID:29211708)
UniProt PMID:29211708, PMID:29728365 MGI:MGI:6271895 NCBI chr22:11,912,043...11,995,497
Ensembl chr22:29,753,241...29,795,632
JBrowse link
G MPHOSPH8 M-phase phosphoprotein 8 ISO (PMID:29211708) UniProt PMID:29211708 NCBI chr13:932,620...999,853
Ensembl chr13:19,278,149...19,316,389
JBrowse link
G RESF1 retroelement silencing factor 1 ISO (MGI:MGI:6271895|PMID:29728365) UniProt PMID:29728365 MGI:MGI:6271895 NCBI chr12:54,238,276...54,272,288
Ensembl chr12:56,829,272...56,863,359
JBrowse link
G SETDB1 SET domain bifurcated histone lysine methyltransferase 1 ISO (MGI:MGI:5440670|PMID:20164836), (MGI:MGI:6271895|PMID:29728365) UniProt PMID:20164836, PMID:29728365 MGI:MGI:5440670, MGI:MGI:6271895 NCBI chr 1:126,275,719...126,314,043
Ensembl chr 1:129,925,009...129,962,442
JBrowse link
G TASOR transcription activation suppressor ISO (PMID:29211708) UniProt PMID:29211708 NCBI chr 3:56,555,945...56,619,151
Ensembl chr 3:57,771,656...57,834,077
JBrowse link
G TRIM28 tripartite motif containing 28 ISO (MGI:MGI:3842857|PMID:19270682)
(MGI:MGI:3842857|PMID:19270682), (MGI:MGI:5440670|PMID:20164836)
MGI PMID:19270682, PMID:20164836 MGI:MGI:3842857, MGI:MGI:5440670 NCBI chr19:55,557,130...55,563,802
Ensembl chr19:64,371,477...64,377,144
JBrowse link
G ZNF684 zinc finger protein 684 ISO (MGI:MGI:3842857|PMID:19270682) MGI PMID:19270682 MGI:MGI:3842857 NCBI chr 1:39,824,037...39,841,025
Ensembl chr 1:41,145,020...41,162,094
JBrowse link
negative regulation of transformation of host cell by virus term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FBLN1 fibulin 1 ISO (PMID:12200142) UniProtKB PMID:12200142 NCBI chr22:26,390,379...26,488,737 JBrowse link
negative regulation of viral entry into host cell term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APCS amyloid P component, serum ISO (PMID:23544079) BHF-UCL PMID:23544079 NCBI chr 1:134,937,472...134,938,512
Ensembl chr 1:138,734,046...138,735,093
JBrowse link
G FCN1 ficolin 1 ISO (PMID:22851708) UniProtKB PMID:22851708 NCBI chr 9:106,039,315...106,047,648 JBrowse link
G FCN3 ficolin 3 ISO (PMID:22851708) UniProtKB PMID:22851708 NCBI chr 1:26,620,373...26,636,424
Ensembl chr 1:27,676,866...27,683,861
JBrowse link
G GSN gelsolin ISO (PMID:23575248) UniProtKB PMID:23575248 NCBI chr 9:92,413,819...92,460,483
Ensembl chr 9:120,741,148...120,805,831
JBrowse link
G IFITM1 interferon induced transmembrane protein 1 ISO (PMID:21253575), (PMID:23358889) UniProtKB PMID:21253575, PMID:23358889 NCBI chr11:309,930...311,177 JBrowse link
G IFITM2 interferon induced transmembrane protein 2 ISO (PMID:21253575), (PMID:23358889) UniProtKB PMID:21253575, PMID:23358889 NCBI chr11:304,068...305,273 JBrowse link
G LOC100969436 interferon-induced transmembrane protein 2 ISO (MGI:MGI:5437420|PMID:21253575) UniProtKB PMID:21253575 MGI:MGI:5437420 Ensembl chr11:348,341...349,551 JBrowse link
G LOC100970132 interferon-induced transmembrane protein 1 ISO (MGI:MGI:5437420|PMID:21253575), (MGI:MGI:5780029|PMID:25738301) UniProtKB PMID:21253575, PMID:25738301 MGI:MGI:5437420, MGI:MGI:5780029 Ensembl chr11:353,236...354,986 JBrowse link
G LOC100972354 interferon alpha-2 ISO (PMID:22783022) BHF-UCL PMID:22783022 NCBI chr 9:21,245,017...21,246,210
Ensembl chr 9:21,863,062...21,863,736
JBrowse link
G MID2 midline 2 ISO (PMID:18248090) UniProtKB PMID:18248090 NCBI chr  X:96,917,731...97,026,545
Ensembl chr  X:107,290,776...107,393,162
JBrowse link
G MRE11 MRE11 homolog, double strand break repair nuclease ISO RGD PMID:22850678 RGD:8693392 NCBI chr11:89,418,537...89,500,705
Ensembl chr11:92,918,549...92,985,966
JBrowse link
G NBN nibrin ISO RGD PMID:22850678 RGD:8693392 NCBI chr 8:86,622,797...86,674,202
Ensembl chr 8:88,575,198...88,626,307
JBrowse link
G PTX3 pentraxin 3 ISO (PMID:23544079) BHF-UCL PMID:23544079 NCBI chr 3:154,485,470...154,492,293
Ensembl chr 3:162,537,577...162,543,652
JBrowse link
G RAD50 RAD50 double strand break repair protein ISO RGD PMID:22850678 RGD:8693392 NCBI chr 5:127,972,630...128,059,911 JBrowse link
G SNX3 sorting nexin 3 ISO (PMID:18767904) UniProtKB PMID:18767904 NCBI chr 6:106,010,633...106,063,331
Ensembl chr 6:109,874,105...109,924,185
JBrowse link
G TRIM10 tripartite motif containing 10 ISO (MGI:MGI:5545996|PMID:18248090) UniProtKB PMID:18248090 MGI:MGI:5545996 NCBI chr 6:29,929,516...29,938,355
Ensembl chr 6:30,601,812...30,608,082
JBrowse link
G TRIM11 tripartite motif containing 11 ISO (MGI:MGI:5545996|PMID:18248090)
(PMID:18248090)
UniProtKB PMID:18248090 MGI:MGI:5545996 NCBI chr 1:203,795,924...203,809,703
Ensembl chr 1:209,006,979...209,019,994
JBrowse link
G TRIM25 tripartite motif containing 25 ISO (MGI:MGI:5545996|PMID:18248090) UniProtKB PMID:18248090 MGI:MGI:5545996 NCBI chr17:50,965,592...50,991,630
Ensembl chr17:55,826,458...55,852,422
JBrowse link
G TRIM26 tripartite motif containing 26 ISO (PMID:18248090) UniProtKB PMID:18248090 NCBI chr 6:29,962,838...29,990,710
Ensembl chr 6:30,632,948...30,660,809
JBrowse link
G TRIM31 tripartite motif containing 31 ISO (MGI:MGI:5545996|PMID:18248090)
(PMID:18248090)
UniProtKB PMID:18248090 MGI:MGI:5545996 NCBI chr 6:29,880,668...29,890,905
Ensembl chr 6:30,550,802...30,560,977
JBrowse link
G TRIM5 tripartite motif containing 5 ISO (PMID:18248090) UniProtKB PMID:18248090 NCBI chr11:5,798,336...5,819,876
Ensembl chr11:5,479,033...5,500,758
JBrowse link
G TRIM56 tripartite motif containing 56 ISO (MGI:MGI:5545996|PMID:18248090) UniProtKB PMID:18248090 MGI:MGI:5545996 NCBI chr 7:93,225,830...93,231,127
Ensembl chr 7:106,469,474...106,471,741
JBrowse link
G TRIM59 tripartite motif containing 59 ISO (MGI:MGI:5545996|PMID:18248090) UniProtKB PMID:18248090 MGI:MGI:5545996 NCBI chr 3:157,458,982...157,471,521 JBrowse link
G TRIM8 tripartite motif containing 8 ISO (MGI:MGI:5545996|PMID:18248090) UniProtKB PMID:18248090 MGI:MGI:5545996 NCBI chr10:99,242,187...99,256,342
Ensembl chr10:102,707,199...102,720,565
JBrowse link
negative regulation of viral genome replication term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAR adenosine deaminase RNA specific ISO (MGI:MGI:4939544|PMID:21173229) MGI PMID:21173229 MGI:MGI:4939544 NCBI chr 1:129,937,993...129,983,747 JBrowse link
G APOBEC3A apolipoprotein B mRNA editing enzyme catalytic subunit 3A ISO (PMID:16527742) UniProtKB PMID:16527742 NCBI chr22:19,866,522...19,872,836 JBrowse link
G APOBEC3C apolipoprotein B mRNA editing enzyme catalytic subunit 3C ISO (PMID:21632763) UniProtKB PMID:21632763 NCBI chr22:19,924,116...19,930,771
Ensembl chr22:37,743,388...37,749,725
JBrowse link
G APOBEC3F apolipoprotein B mRNA editing enzyme catalytic subunit 3F ISO (PMID:16378963), (PMID:17121840) BHF-UCL PMID:16378963, PMID:17121840 NCBI chr22:19,950,036...19,966,002 JBrowse link
G APOBEC3G apolipoprotein B mRNA editing enzyme catalytic subunit 3G ISO (PMID:16378963), (PMID:17121840) UniProtKB PMID:16378963, PMID:17121840 NCBI chr22:19,977,184...19,994,769 JBrowse link
G APOBEC3H apolipoprotein B mRNA editing enzyme catalytic subunit 3H ISO (MGI:MGI:5486557|PMID:16378963) UniProtKB PMID:16378963 MGI:MGI:5486557 NCBI chr22:20,003,585...20,010,741
Ensembl chr22:37,821,315...37,828,153
JBrowse link
G BANF1 BAF nuclear assembly factor 1 ISO (PMID:18005698) UniProtKB PMID:18005698 NCBI chr11:61,366,480...61,368,547
Ensembl chr11:64,693,447...64,695,509
JBrowse link
G BST2 bone marrow stromal cell antigen 2 ISO (MGI:MGI:5437405|PMID:22284121), (MGI:MGI:5448513|PMID:21919738)
(PMID:20943977)
UniProtKB PMID:20943977, PMID:21919738, PMID:22284121 MGI:MGI:5437405, MGI:MGI:5448513 NCBI chr19:16,890,257...16,892,989
Ensembl chr19:17,863,991...17,866,728
JBrowse link
G CCL5 C-C motif chemokine ligand 5 ISO (PMID:10490959) BHF-UCL PMID:10490959 NCBI chr17:20,915,198...20,923,530
Ensembl chr17:21,210,798...21,219,172
JBrowse link
G EIF2AK2 eukaryotic translation initiation factor 2 alpha kinase 2 ISO (PMID:19189853), (PMID:19840259)
(MGI:MGI:5487533|PMID:20038207)
UniProtKB PMID:19189853, PMID:19840259, PMID:20038207 MGI:MGI:5487533 NCBI chr2A:37,130,386...37,184,587
Ensembl chr2A:37,895,814...37,941,686
JBrowse link
G FAM111A FAM111 trypsin like peptidase A ISO (PMID:23093934) UniProtKB PMID:23093934 NCBI chr11:54,359,711...54,372,132
Ensembl chr11:57,818,413...57,823,046
JBrowse link
G IFI16 interferon gamma inducible protein 16 ISO (PMID:22291595) UniProtKB PMID:22291595 NCBI chr 1:134,364,706...134,405,910
Ensembl chr 1:138,152,328...138,203,424
JBrowse link
G IFIT1 interferon induced protein with tetratricopeptide repeats 1 ISO (PMID:19008854), (PMID:21976647) UniProtKB PMID:19008854, PMID:21976647 NCBI chr10:86,117,807...86,129,256
Ensembl chr10:89,667,149...89,668,579
JBrowse link
G IFIT5 interferon induced protein with tetratricopeptide repeats 5 ISO (PMID:23774268) UniProtKB PMID:23774268 NCBI chr10:86,139,816...86,146,244
Ensembl chr10:89,678,703...89,685,839
JBrowse link
G IFITM1 interferon induced transmembrane protein 1 ISO (PMID:21976647)
(PMID:21253575)
UniProtKB PMID:21253575, PMID:21976647 NCBI chr11:309,930...311,177 JBrowse link
G IFITM2 interferon induced transmembrane protein 2 ISO (PMID:21253575) UniProtKB PMID:21253575 NCBI chr11:304,068...305,273 JBrowse link
G IFNB1 interferon beta 1 ISO (PMID:19008854) BHF-UCL PMID:19008854 NCBI chr 9:20,884,742...20,886,317 JBrowse link
G ILF3 interleukin enhancer binding factor 3 ISO (MGI:MGI:4867319|PMID:21123651) UniProtKB PMID:21123651 MGI:MGI:4867319 NCBI chr19:10,206,636...10,244,779
Ensembl chr19:10,867,143...10,905,953
JBrowse link
G ISG20 interferon stimulated exonuclease gene 20 ISO (PMID:21036379) UniProtKB PMID:21036379 NCBI chr15:67,328,334...67,345,085
Ensembl chr15:86,536,647...86,553,751
JBrowse link
G LTF lactotransferrin ISO (PMID:25193851) AgBase PMID:25193851 NCBI chr 3:46,337,738...46,367,476
Ensembl chr 3:47,442,440...47,471,532
JBrowse link
G MAVS mitochondrial antiviral signaling protein ISO (MGI:MGI:4881394|PMID:20451243)
(PMID:20451243)
UniProtKB PMID:20451243 MGI:MGI:4881394 NCBI chr20:3,885,044...3,903,554
Ensembl chr20:3,659,559...3,701,089
JBrowse link
G MX1 MX dynamin like GTPase 1 ISO (PMID:24500530)
(PMID:14687945), (PMID:15047845), (PMID:16202617)
AgBase
UniProtKB
PMID:14687945, PMID:15047845, PMID:16202617, PMID:24500530 NCBI chr21:27,756,768...27,795,307
Ensembl chr21:41,095,928...41,123,019
JBrowse link
G OAS1 2'-5'-oligoadenylate synthetase 1 ISO (PMID:18931074), (PMID:19923450)
(PMID:20844035)
UniProtKB
UniProt
PMID:18931074, PMID:19923450, PMID:20844035 NCBI chr12:110,511,984...110,525,343
Ensembl chr12:113,896,760...113,921,814
JBrowse link
G OAS3 2'-5'-oligoadenylate synthetase 3 ISO (PMID:19056102), (PMID:19923450) UniProtKB PMID:19056102, PMID:19923450 NCBI chr12:110,543,522...110,578,463
Ensembl chr12:113,928,202...113,959,654
JBrowse link
G OASL 2'-5'-oligoadenylate synthetase like ISO (PMID:18931074), (PMID:20074559) UniProtKB PMID:18931074, PMID:20074559 NCBI chr12:118,602,088...118,621,056
Ensembl chr12:121,971,880...121,990,855
JBrowse link
G PARP10 poly(ADP-ribose) polymerase family member 10 ISO (PMID:22176891) UniProtKB PMID:22176891 NCBI chr 8:140,743,061...140,744,014
Ensembl chr 8:143,735,819...143,744,138
JBrowse link
G PLSCR1 phospholipid scramblase 1 ISO (MGI:MGI:5284800|PMID:15308695)
(PMID:15308695)
UniProtKB PMID:15308695 MGI:MGI:5284800 NCBI chr 3:143,528,967...143,558,468
Ensembl chr 3:151,112,483...151,132,964
JBrowse link
G PROX1 prospero homeobox 1 ISO (PMID:19264593) BHF-UCL PMID:19264593 NCBI chr 1:189,556,124...189,609,297
Ensembl chr 1:194,412,980...194,460,763
JBrowse link
G RNASEL ribonuclease L ISO (PMID:19923450) UniProtKB PMID:19923450 NCBI chr 1:158,092,346...158,108,026
Ensembl chr 1:161,741,645...161,760,045
JBrowse link
G RSAD2 radical S-adenosyl methionine domain containing 2 ISO (PMID:21957124)
(MGI:MGI:5431072|PMID:21880757)
UniProtKB PMID:21880757, PMID:21957124 MGI:MGI:5431072 NCBI chr2A:6,873,821...6,906,087
Ensembl chr2A:7,021,937...7,042,961
JBrowse link
G SHFL shiftless antiviral inhibitor of ribosomal frameshifting ISO (PMID:26735137) UniProtKB PMID:26735137 NCBI chr19:9,634,718...9,641,824
Ensembl chr19:10,293,967...10,301,067
JBrowse link
G SLPI secretory leukocyte peptidase inhibitor ISO (PMID:19333378) UniProtKB PMID:19333378 NCBI chr20:41,583,429...41,585,773
Ensembl chr20:42,673,417...42,675,773
JBrowse link
G SRPK1 SRSF protein kinase 1 ISO (PMID:12417631) BHF-UCL PMID:12417631 NCBI chr 6:35,393,290...35,480,530
Ensembl chr 6:36,598,552...36,683,257
JBrowse link
G SRPK2 SRSF protein kinase 2 ISO (PMID:12417631) BHF-UCL PMID:12417631 NCBI chr 7:97,102,226...97,378,773
Ensembl chr 7:109,834,478...109,989,050
JBrowse link
G TNF tumor necrosis factor ISO (PMID:10490959) BHF-UCL PMID:10490959 NCBI chr 6:31,236,650...31,239,423
Ensembl chr 6:32,126,618...32,129,381
JBrowse link
G TRIM6 tripartite motif containing 6 ISO (PMID:24882218)
(MGI:MGI:5645191|PMID:24882218)
UniProtKB PMID:24882218 MGI:MGI:5645191 NCBI chr11:5,731,256...5,748,057 JBrowse link
G ZC3HAV1 zinc finger CCCH-type containing, antiviral 1 ISO PMID:21876179
(PMID:21102435), (PMID:21876179)
UniProt
UniProtKB
PMID:21102435, PMID:21876179 RGD:8554819 NCBI chr 7:131,002,580...131,068,513
Ensembl chr 7:143,489,750...143,555,438
JBrowse link
negative regulation of viral life cycle term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HMOX1 heme oxygenase 1 ISO (PMID:25086213) AgBase PMID:25086213 NCBI chr22:16,388,368...16,401,289
Ensembl chr22:34,230,825...34,244,063
JBrowse link
G IL32 interleukin 32 ISO (PMID:23729669) ARUK-UCL PMID:23729669 NCBI chr16:2,007,018...2,023,757
Ensembl chr16:3,179,637...3,203,929
JBrowse link
G PPIA peptidylprolyl isomerase A ISO (PMID:19207730), (PMID:22347431) UniProt PMID:19207730, PMID:22347431 NCBI chr 7:45,510,450...45,515,448
Ensembl chr 7:45,578,765...45,605,545
JBrowse link
negative regulation of viral release from host cell term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100970314 charged multivesicular body protein 3 ISO (PMID:16740483) UniProtKB PMID:16740483 NCBI chr2A:86,559,695...86,619,615 JBrowse link
G MID2 midline 2 ISO (PMID:18248090) UniProtKB PMID:18248090 NCBI chr  X:96,917,731...97,026,545
Ensembl chr  X:107,290,776...107,393,162
JBrowse link
G PML PML nuclear body scaffold ISO (MGI:MGI:5545996|PMID:18248090)
(PMID:18248090)
UniProtKB PMID:18248090 MGI:MGI:5545996 NCBI chr15:52,903,874...52,955,151
Ensembl chr15:71,658,884...71,710,883
JBrowse link
G TRIM11 tripartite motif containing 11 ISO (MGI:MGI:5545996|PMID:18248090)
(PMID:18248090)
UniProtKB PMID:18248090 MGI:MGI:5545996 NCBI chr 1:203,795,924...203,809,703
Ensembl chr 1:209,006,979...209,019,994
JBrowse link
G TRIM13 tripartite motif containing 13 ISO (PMID:18248090) UniProtKB PMID:18248090 NCBI chr13:31,137,236...31,153,398
Ensembl chr13:49,889,041...49,900,488
JBrowse link
G TRIM15 tripartite motif containing 15 ISO (PMID:18248090) UniProtKB PMID:18248090 NCBI chr 6:29,939,261...29,949,706
Ensembl chr 6:30,610,348...30,619,826
JBrowse link
G TRIM21 tripartite motif containing 21 ISO (PMID:18248090) UniProtKB PMID:18248090 NCBI chr11:4,588,083...4,596,942
Ensembl chr11:4,254,152...4,262,981
JBrowse link
G TRIM25 tripartite motif containing 25 ISO (MGI:MGI:5545996|PMID:18248090) UniProtKB PMID:18248090 MGI:MGI:5545996 NCBI chr17:50,965,592...50,991,630
Ensembl chr17:55,826,458...55,852,422
JBrowse link
G TRIM26 tripartite motif containing 26 ISO (PMID:18248090) UniProtKB PMID:18248090 NCBI chr 6:29,962,838...29,990,710
Ensembl chr 6:30,632,948...30,660,809
JBrowse link
G TRIM27 tripartite motif containing 27 ISO (MGI:MGI:5545996|PMID:18248090) UniProtKB PMID:18248090 MGI:MGI:5545996 NCBI chr 6:28,722,505...28,743,484
Ensembl chr 6:29,390,423...29,411,308
JBrowse link
G TRIM28 tripartite motif containing 28 ISO (PMID:18248090) UniProtKB PMID:18248090 NCBI chr19:55,557,130...55,563,802
Ensembl chr19:64,371,477...64,377,144
JBrowse link
G TRIM32 tripartite motif containing 32 ISO (PMID:18248090) UniProtKB PMID:18248090 NCBI chr 9:87,819,723...87,838,684
Ensembl chr 9:116,183,746...116,185,707
JBrowse link
G TRIM35 tripartite motif containing 35 ISO (PMID:18248090) UniProtKB PMID:18248090 NCBI chr 8:26,554,217...26,580,684
Ensembl chr 8:23,757,009...23,783,457
JBrowse link
G TRIM5 tripartite motif containing 5 ISO (PMID:18248090) UniProtKB PMID:18248090 NCBI chr11:5,798,336...5,819,876
Ensembl chr11:5,479,033...5,500,758
JBrowse link
G TRIM56 tripartite motif containing 56 ISO (MGI:MGI:5545996|PMID:18248090) UniProtKB PMID:18248090 MGI:MGI:5545996 NCBI chr 7:93,225,830...93,231,127
Ensembl chr 7:106,469,474...106,471,741
JBrowse link
G TRIM8 tripartite motif containing 8 ISO (MGI:MGI:5545996|PMID:18248090)
(PMID:18248090)
UniProtKB PMID:18248090 MGI:MGI:5545996 NCBI chr10:99,242,187...99,256,342
Ensembl chr10:102,707,199...102,720,565
JBrowse link
negative regulation of viral transcription term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HEXIM1 HEXIM P-TEFb complex subunit 1 ISO (PMID:18249148) FlyBase PMID:18249148 NCBI chr17:12,175,544...12,180,077
Ensembl chr17:12,353,590...12,354,669
JBrowse link
G LARP7 La ribonucleoprotein 7, transcriptional regulator ISO (PMID:18249148), (PMID:18483487) FlyBase PMID:18249148, PMID:18483487 NCBI chr 4:105,128,335...105,149,498
Ensembl chr 4:115,698,093...115,711,003
JBrowse link
G MID2 midline 2 ISO (PMID:18248090) UniProtKB PMID:18248090 NCBI chr  X:96,917,731...97,026,545
Ensembl chr  X:107,290,776...107,393,162
JBrowse link
G SP100 SP100 nuclear antigen ISO (PMID:16873258) BHF-UCL PMID:16873258 NCBI chr2B:117,673,152...117,799,911
Ensembl chr2B:236,496,446...236,601,096
JBrowse link
G TRIM11 tripartite motif containing 11 ISO (PMID:18248090)
(MGI:MGI:5545996|PMID:18248090)
UniProtKB PMID:18248090 MGI:MGI:5545996 NCBI chr 1:203,795,924...203,809,703
Ensembl chr 1:209,006,979...209,019,994
JBrowse link
G TRIM13 tripartite motif containing 13 ISO (PMID:18248090) UniProtKB PMID:18248090 NCBI chr13:31,137,236...31,153,398
Ensembl chr13:49,889,041...49,900,488
JBrowse link
G TRIM14 tripartite motif containing 14 ISO (PMID:18248090) UniProtKB PMID:18248090 NCBI chr 9:69,176,088...69,209,574
Ensembl chr 9:97,294,407...97,330,059
JBrowse link
G TRIM21 tripartite motif containing 21 ISO (PMID:18248090) UniProtKB PMID:18248090 NCBI chr11:4,588,083...4,596,942
Ensembl chr11:4,254,152...4,262,981
JBrowse link
G TRIM27 tripartite motif containing 27 ISO (PMID:18248090)
(MGI:MGI:5545996|PMID:18248090)
UniProtKB PMID:18248090 MGI:MGI:5545996 NCBI chr 6:28,722,505...28,743,484
Ensembl chr 6:29,390,423...29,411,308
JBrowse link
G TRIM31 tripartite motif containing 31 ISO (PMID:18248090) UniProtKB PMID:18248090 NCBI chr 6:29,880,668...29,890,905
Ensembl chr 6:30,550,802...30,560,977
JBrowse link
G TRIM32 tripartite motif containing 32 ISO (PMID:18248090) UniProtKB PMID:18248090 NCBI chr 9:87,819,723...87,838,684
Ensembl chr 9:116,183,746...116,185,707
JBrowse link
G TRIM62 tripartite motif containing 62 ISO (PMID:18248090) UniProtKB PMID:18248090 NCBI chr 1:32,429,824...32,467,185
Ensembl chr 1:33,614,555...33,650,859
JBrowse link
G TRIM8 tripartite motif containing 8 ISO (MGI:MGI:5545996|PMID:18248090) UniProtKB PMID:18248090 MGI:MGI:5545996 NCBI chr10:99,242,187...99,256,342
Ensembl chr10:102,707,199...102,720,565
JBrowse link
G UBP1 upstream binding protein 1 ISO (PMID:8114710) GO_Central PMID:8114710 NCBI chr 3:33,310,506...33,362,589
Ensembl chr 3:33,611,712...33,663,175
JBrowse link
G ZFP36 ZFP36 ring finger protein ISO (PMID:14679154) UniProtKB PMID:14679154 NCBI chr19:36,505,056...36,507,693
Ensembl chr19:45,052,801...45,055,390
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12561
    negative regulation of biological process 4828
      negative regulation of viral process 110
        negative regulation by host of viral process + 15
        negative regulation by virus of viral protein levels in host cell 2
        negative regulation of transformation of host cell by virus 1
        negative regulation of viral genome replication + 57
        negative regulation of viral life cycle + 30
        negative regulation of viral release from host cell + 17
        negative regulation of viral transcription + 28
        negative regulation of viral translation 0
Path 2
Term Annotations click to browse term
  biological_process 12561
    biological regulation 9168
      regulation of biological process 8671
        regulation of symbiotic process 214
          regulation of viral process 197
            negative regulation of viral process 110
              negative regulation by host of viral process + 15
              negative regulation by virus of viral protein levels in host cell 2
              negative regulation of transformation of host cell by virus 1
              negative regulation of viral genome replication + 57
              negative regulation of viral life cycle + 30
              negative regulation of viral release from host cell + 17
              negative regulation of viral transcription + 28
              negative regulation of viral translation 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.