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ONTOLOGY REPORT - ANNOTATIONS


Term:negative regulation of viral process
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Accession:GO:0048525 term browser browse the term
Definition:Any process that stops, prevents, or reduces the frequency, rate or extent of a multi-organism process in which a virus is a participant.
Synonyms:narrow_synonym: down regulation of viral life cycle;   downregulation of viral life cycle;   inhibition of viral life cycle;   negative regulation of viral life cycle;   negative regulation of viral reproduction


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negative regulation of viral process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOBEC3Z3 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3Z3 ISO (PMID:18827027) UniProtKB PMID:18827027 NCBI chr10:25,910,973...25,917,508
Ensembl chr10:25,911,291...25,913,808
JBrowse link
G CREBBP CREB binding protein ISO (MGI:MGI:2151262|PMID:11583620) CAFA PMID:11583620 MGI:MGI:2151262 NCBI chr 6:37,410,201...37,536,688
Ensembl chr 6:37,409,930...37,534,176
JBrowse link
G LTF lactotransferrin ISO (PMID:25193851) AgBase PMID:25193851 NCBI chr20:42,231,994...42,263,202
Ensembl chr20:42,231,994...42,263,202
JBrowse link
G MBL2 mannose binding lectin 2 ISO (PMID:23544079) BHF-UCL PMID:23544079 NCBI chr 4:29,419,886...29,424,377 JBrowse link
modulation by host of viral RNA-binding transcription factor activity term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUCKS1 nuclear casein kinase and cyclin dependent kinase substrate 1 IEA Ensembl GO_REF:0000107 NCBI chr38:2,157,109...2,188,543
Ensembl chr38:2,160,233...2,170,560
JBrowse link
modulation by host of viral transcription term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PSMC3 proteasome 26S subunit, ATPase 3 ISO (PMID:2194290), (PMID:8419915) GO_Central PMID:2194290, PMID:8419915 NCBI chr18:42,212,083...42,218,958 JBrowse link
negative regulation by host of viral genome replication term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCL8 C-C motif chemokine ligand 8 IEA Ensembl GO_REF:0000107 NCBI chr 9:38,949,184...38,950,702
Ensembl chr 9:38,948,184...38,950,803
JBrowse link
G CCNK cyclin K IEA Ensembl GO_REF:0000107 NCBI chr 8:67,910,772...67,927,216
Ensembl chr 8:67,901,426...67,945,214
JBrowse link
G CEACAM1 CEA cell adhesion molecule 1 ISO (MGI:MGI:55926|PMID:6327825) MGI PMID:6327825 MGI:MGI:55926 NCBI chr 1:111,902,429...111,919,191
Ensembl chr 1:111,745,413...111,917,830
JBrowse link
G DDX3X DEAD-box helicase 3 X-linked ISO (PMID:24380861) AgBase PMID:24380861 NCBI chr  X:35,759,367...35,789,759
Ensembl chr  X:35,759,416...35,789,774
JBrowse link
G EIF2AK4 eukaryotic translation initiation factor 2 alpha kinase 4 ISO (MGI:MGI:5700304|PMID:16601681) UniProtKB PMID:16601681 MGI:MGI:5700304 NCBI chr30:7,144,727...7,248,014
Ensembl chr30:7,144,570...7,248,000
JBrowse link
G PRKN parkin RBR E3 ubiquitin protein ligase IEA Ensembl GO_REF:0000107 NCBI chr 1:49,886,887...51,201,930
Ensembl chr 1:49,889,005...51,201,764
JBrowse link
G VAPA VAMP associated protein A IEA Ensembl GO_REF:0000107 NCBI chr 7:75,844,927...75,891,811
Ensembl chr 7:75,845,000...75,889,076
JBrowse link
G VAPB VAMP associated protein B and C ISO (PMID:19515777) AgBase PMID:19515777 NCBI chr24:43,182,158...43,238,019
Ensembl chr24:43,182,196...43,231,336
JBrowse link
G ZBED1 zinc finger BED-type containing 1 IEA Ensembl GO_REF:0000107 NCBI chr  X:1,299,710...1,303,155
Ensembl chr  X:1,300,940...1,303,033
JBrowse link
G ZC3H12A zinc finger CCCH-type containing 12A IEA Ensembl GO_REF:0000107 NCBI chr15:4,972,369...4,984,218
Ensembl chr15:4,972,956...4,980,371
JBrowse link
negative regulation by host of viral glycoprotein metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PTX3 pentraxin 3 IEA Ensembl GO_REF:0000107 NCBI chr23:50,952,835...50,958,607
Ensembl chr23:50,952,885...50,958,167
JBrowse link
negative regulation by host of viral process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CEACAM1 CEA cell adhesion molecule 1 ISO (MGI:MGI:3848729|PMID:19358828)
(MGI:MGI:2148352|PMID:11483763)
(MGI:MGI:1098064|PMID:9343248)
MGI PMID:9343248, PMID:11483763, PMID:19358828 MGI:MGI:1098064, MGI:MGI:2148352, MGI:MGI:3848729 NCBI chr 1:111,902,429...111,919,191
Ensembl chr 1:111,745,413...111,917,830
JBrowse link
G CRP C-reactive protein IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr38:22,396,787...22,398,180
Ensembl chr38:22,396,263...22,399,166
JBrowse link
G LTF lactotransferrin IEA Ensembl GO_REF:0000107 NCBI chr20:42,231,994...42,263,202
Ensembl chr20:42,231,994...42,263,202
JBrowse link
G PTX3 pentraxin 3 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr23:50,952,835...50,958,607
Ensembl chr23:50,952,885...50,958,167
JBrowse link
negative regulation by host of viral release from host cell term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G VAPB VAMP associated protein B and C ISO (PMID:19515777) AgBase PMID:19515777 NCBI chr24:43,182,158...43,238,019
Ensembl chr24:43,182,196...43,231,336
JBrowse link
negative regulation by host of viral transcription term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCL3 chemokine (C-C motif) ligand 3 ISS UniProtKB GO_REF:0000024 NCBI chr 9:37,693,711...37,695,137
Ensembl chr 9:37,686,480...37,695,573
JBrowse link
G CCL4 chemokine (C-C motif) ligand 4 ISO (PMID:10841574) UniProtKB PMID:10841574 NCBI chr 9:37,681,342...37,682,691
Ensembl chr 9:37,676,966...37,710,209
JBrowse link
G CCL5 C-C motif chemokine ligand 5 IEA Ensembl GO_REF:0000107 NCBI chr 9:37,817,409...37,823,852
Ensembl chr 9:37,817,305...37,823,852
JBrowse link
G HDAC1 histone deacetylase 1 IEA Ensembl GO_REF:0000107 NCBI chr 2:68,901,339...68,936,473
Ensembl chr 2:68,901,651...68,936,186
JBrowse link
G HMGA2 high mobility group AT-hook 2 ISO (PMID:17005673) UniProtKB PMID:17005673 NCBI chr10:8,348,101...8,491,435 JBrowse link
G HMOX1 heme oxygenase 1 ISO (PMID:25086213) AgBase PMID:25086213 NCBI chr10:28,744,404...28,751,544
Ensembl chr10:28,743,795...28,751,773
JBrowse link
G INPP5K inositol polyphosphate-5-phosphatase K ISS UniProtKB GO_REF:0000024 NCBI chr 9:45,660,445...45,680,407
Ensembl chr 9:45,660,446...45,680,363
JBrowse link
G JUN Jun proto-oncogene, AP-1 transcription factor subunit ISO (PMID:2833704) UniProtKB PMID:2833704 NCBI chr 5:50,966,698...50,968,939 JBrowse link
G POU2F3 POU class 2 homeobox 3 ISO (PMID:14645924) UniProtKB PMID:14645924 NCBI chr 5:13,693,686...13,761,295
Ensembl chr 5:13,688,959...13,761,847
JBrowse link
G REST RE1 silencing transcription factor ISS UniProtKB GO_REF:0000024 NCBI chr13:49,041,082...49,062,596
Ensembl chr13:49,041,047...49,059,388
JBrowse link
G TARDBP TAR DNA binding protein IEA Ensembl GO_REF:0000107 NCBI chr 2:84,987,752...84,998,136
Ensembl chr 2:84,989,952...84,998,593
JBrowse link
G TFAP4 transcription factor AP-4 IEA Ensembl GO_REF:0000107 NCBI chr 6:37,075,462...37,111,039
Ensembl chr 6:37,097,786...37,111,072
JBrowse link
G ZNF639 zinc finger protein 639 IEA Ensembl GO_REF:0000107 NCBI chr34:12,767,067...12,775,995
Ensembl chr34:12,766,681...12,775,792
JBrowse link
negative regulation by virus of viral protein levels in host cell term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G STAT1 signal transducer and activator of transcription 1 IEA Ensembl GO_REF:0000107 NCBI chr37:1,513,438...1,549,837
Ensembl chr37:1,507,219...1,550,178
JBrowse link
G VAPB VAMP associated protein B and C ISO (PMID:19515777) AgBase PMID:19515777 NCBI chr24:43,182,158...43,238,019
Ensembl chr24:43,182,196...43,231,336
JBrowse link
negative regulation of intracellular transport of viral material term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BST2 bone marrow stromal cell antigen 2 ISO (PMID:19036818), (PMID:20686043), (PMID:20943977)
(MGI:MGI:5437405|PMID:22284121), (MGI:MGI:5448513|PMID:21919738)
(MGI:MGI:5437427|PMID:20686043)
UniProtKB PMID:19036818, PMID:20686043, PMID:20943977, PMID:21919738, PMID:22284121 MGI:MGI:5437405, MGI:MGI:5437427, MGI:MGI:5448513 NCBI chr20:45,383,757...45,387,420
Ensembl chr20:45,383,915...45,387,178
JBrowse link
G MX1 MX dynamin like GTPase 1 ISO (PMID:20167191) AgBase PMID:20167191 NCBI chr31:35,898,206...35,929,802
Ensembl chr31:35,860,590...35,951,350
JBrowse link
negative regulation of single stranded viral RNA replication via double stranded DNA intermediate term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AICDA activation induced cytidine deaminase IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr27:37,064,107...37,073,791
Ensembl chr27:37,064,080...37,073,789
JBrowse link
G APOBEC3Z1 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3Z1 IBA (PMID:21873635) GO_Central PMID:21873635
G APOBEC3Z3 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3Z3 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:25,910,973...25,917,508
Ensembl chr10:25,911,291...25,913,808
JBrowse link
G HMGA2 high mobility group AT-hook 2 ISO (PMID:17005673) UniProtKB PMID:17005673 NCBI chr10:8,348,101...8,491,435 JBrowse link
G INPP5K inositol polyphosphate-5-phosphatase K ISS UniProtKB GO_REF:0000024 NCBI chr 9:45,660,445...45,680,407
Ensembl chr 9:45,660,446...45,680,363
JBrowse link
G LOC482454 zinc finger protein 684 ISO (MGI:MGI:3842857|PMID:19270682) MGI PMID:19270682 MGI:MGI:3842857 NCBI chr15:2,476,742...2,502,729
Ensembl chr15:2,477,400...2,503,684
JBrowse link
G MORC2 MORC family CW-type zinc finger 2 IEA Ensembl GO_REF:0000107 NCBI chr26:23,951,704...23,993,620
Ensembl chr26:23,953,130...23,992,431
JBrowse link
G MPHOSPH8 M-phase phosphoprotein 8 IEA Ensembl GO_REF:0000107 NCBI chr25:18,392,706...18,443,241
Ensembl chr25:18,392,409...18,443,241
JBrowse link
G RESF1 retroelement silencing factor 1 ISO (MGI:MGI:6271895|PMID:29728365) UniProt PMID:29728365 MGI:MGI:6271895 NCBI chr27:16,829,611...16,856,960
Ensembl chr27:16,829,968...16,839,166
JBrowse link
G SETDB1 SET domain bifurcated histone lysine methyltransferase 1 ISO (MGI:MGI:5440670|PMID:20164836), (MGI:MGI:6271895|PMID:29728365) UniProt PMID:20164836, PMID:29728365 MGI:MGI:5440670, MGI:MGI:6271895 NCBI chr17:60,035,819...60,069,721
Ensembl chr17:60,037,379...60,069,551
JBrowse link
G TASOR transcription activation suppressor IEA Ensembl GO_REF:0000107 NCBI chr20:33,665,231...33,713,264
Ensembl chr20:33,646,000...33,712,936
JBrowse link
G TRIM28 tripartite motif containing 28 ISO (MGI:MGI:3842857|PMID:19270682), (MGI:MGI:5440670|PMID:20164836) MGI PMID:19270682, PMID:20164836 MGI:MGI:3842857, MGI:MGI:5440670 NCBI chr 1:99,408,920...99,415,432
Ensembl chr 1:99,408,925...99,415,146
JBrowse link
negative regulation of transformation of host cell by virus term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FBLN1 fibulin 1 ISO (PMID:12200142) UniProtKB PMID:12200142 NCBI chr10:20,498,097...20,564,776
Ensembl chr10:20,498,567...20,627,836
JBrowse link
negative regulation of viral entry into host cell term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FCN2 ficolin 2 IEA Ensembl GO_REF:0000107 NCBI chr 9:50,868,942...50,876,001
Ensembl chr 9:50,868,973...50,875,792
JBrowse link
G GSN gelsolin IEA Ensembl GO_REF:0000107 NCBI chr11:74,248,227...74,268,129
Ensembl chr11:74,233,457...74,268,129
JBrowse link
G LOC475935 interferon-induced transmembrane protein 1-like IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr18:25,484,731...25,485,927 JBrowse link
G LOC483397 interferon-induced transmembrane protein 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr18:25,494,018...25,495,114 JBrowse link
G LOC488347 tripartite motif-containing protein 26 ISO (PMID:18248090) UniProtKB PMID:18248090 NCBI chr35:26,386,575...26,395,549 JBrowse link
G LY6E lymphocyte antigen 6 family member E ISO (PMID:32641482), (PMID:32704094)
(MGI:MGI:6448667|PMID:32704094)
UniProt PMID:32641482, PMID:32704094 MGI:MGI:6448667 NCBI chr13:36,926,776...36,930,265
Ensembl chr13:36,925,980...36,974,979
JBrowse link
G MID2 midline 2 IEA Ensembl GO_REF:0000107 NCBI chr  X:81,267,037...81,467,613
Ensembl chr  X:81,296,249...81,463,210
JBrowse link
G MRE11 MRE11 homolog, double strand break repair nuclease ISO RGD PMID:22850678 RGD:8693392 NCBI chr21:6,448,909...6,528,185
Ensembl chr21:6,449,822...6,527,119
JBrowse link
G NBN nibrin ISO RGD PMID:22850678 RGD:8693392 NCBI chr29:35,416,093...35,477,569
Ensembl chr29:35,416,093...35,477,563
JBrowse link
G PTX3 pentraxin 3 IEA Ensembl GO_REF:0000107 NCBI chr23:50,952,835...50,958,607
Ensembl chr23:50,952,885...50,958,167
JBrowse link
G RAD50 RAD50 double strand break repair protein ISO RGD PMID:22850678 RGD:8693392 NCBI chr11:20,836,863...20,928,930
Ensembl chr11:20,836,879...20,928,819
JBrowse link
G SNX3 sorting nexin 3 IEA Ensembl GO_REF:0000107 NCBI chr12:65,252,175...65,294,620
Ensembl chr12:65,252,175...65,294,611
JBrowse link
G TRIM10 tripartite motif containing 10 IEA Ensembl GO_REF:0000107 NCBI chr35:26,349,624...26,357,002
Ensembl chr35:26,350,125...26,356,592
JBrowse link
G TRIM11 tripartite motif containing 11 IEA Ensembl GO_REF:0000107 NCBI chr14:640,375...647,427 JBrowse link
G TRIM25 tripartite motif containing 25 IEA Ensembl GO_REF:0000107 NCBI chr 9:31,703,628...31,725,674
Ensembl chr 9:31,707,034...31,725,762
JBrowse link
G TRIM56 tripartite motif containing 56 ISO (MGI:MGI:5545996|PMID:18248090) UniProtKB PMID:18248090 MGI:MGI:5545996 NCBI chr 6:8,744,970...8,752,896
Ensembl chr 6:8,749,438...8,751,753
JBrowse link
G TRIM59 tripartite motif containing 59 IEA Ensembl GO_REF:0000107 NCBI chr34:26,495,628...26,509,445
Ensembl chr34:26,497,607...26,498,821
JBrowse link
G TRIM8 tripartite motif containing 8 IEA Ensembl GO_REF:0000107 NCBI chr28:15,124,310...15,138,660
Ensembl chr28:15,123,348...15,146,355
JBrowse link
negative regulation of viral genome replication term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAR adenosine deaminase RNA specific ISO (MGI:MGI:4939544|PMID:21173229) MGI PMID:21173229 MGI:MGI:4939544 NCBI chr 7:42,762,021...42,785,192
Ensembl chr 7:42,748,136...42,782,999
JBrowse link
G APOBEC3Z1 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3Z1 ISO (PMID:16527742) UniProtKB PMID:16527742
G APOBEC3Z3 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3Z3 ISO (MGI:MGI:5486557|PMID:16378963) UniProtKB PMID:16378963 MGI:MGI:5486557 NCBI chr10:25,910,973...25,917,508
Ensembl chr10:25,911,291...25,913,808
JBrowse link
G BANF1 BAF nuclear assembly factor 1 ISO (PMID:18005698) UniProtKB PMID:18005698 NCBI chr18:51,269,817...51,271,484
Ensembl chr18:51,269,815...51,271,690
JBrowse link
G BST2 bone marrow stromal cell antigen 2 ISO (MGI:MGI:5437405|PMID:22284121), (MGI:MGI:5448513|PMID:21919738)
(PMID:20943977)
UniProtKB PMID:20943977, PMID:21919738, PMID:22284121 MGI:MGI:5437405, MGI:MGI:5448513 NCBI chr20:45,383,757...45,387,420
Ensembl chr20:45,383,915...45,387,178
JBrowse link
G CCL5 C-C motif chemokine ligand 5 IEA Ensembl GO_REF:0000107 NCBI chr 9:37,817,409...37,823,852
Ensembl chr 9:37,817,305...37,823,852
JBrowse link
G EIF2AK2 eukaryotic translation initiation factor 2 alpha kinase 2 IEA Ensembl GO_REF:0000107 NCBI chr17:29,494,641...29,537,933
Ensembl chr17:29,496,128...29,537,933
JBrowse link
G FAM111A family with sequence similarity 111 member A ISO (PMID:23093934) UniProtKB PMID:23093934 NCBI chr18:37,584,326...37,595,316 JBrowse link
G IFIT5 interferon induced protein with tetratricopeptide repeats 5 IEA Ensembl GO_REF:0000107 NCBI chr28:4,318,616...4,329,811
Ensembl chr28:4,318,732...4,328,785
JBrowse link
G IFNB1 interferon beta 1 IEA Ensembl GO_REF:0000107 NCBI chr11:40,668,295...40,668,855
Ensembl chr11:40,668,295...40,668,855
JBrowse link
G ILF3 interleukin enhancer binding factor 3 ISO (MGI:MGI:4867319|PMID:21123651) UniProtKB PMID:21123651 MGI:MGI:4867319 NCBI chr20:50,511,915...50,544,234
Ensembl chr20:50,515,334...50,544,184
JBrowse link
G ISG15 ISG15 ubiquitin like modifier IEA Ensembl GO_REF:0000107 NCBI chr 5:56,230,879...56,237,354
Ensembl chr 5:56,236,318...56,404,695
JBrowse link
G ISG20 interferon stimulated exonuclease gene 20 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:51,822,642...51,833,665
Ensembl chr 3:51,822,888...51,833,659
JBrowse link
G LOC100688853 phospholipid scramblase 1-like IEA Ensembl GO_REF:0000107 NCBI chr23:41,591,425...41,625,918
Ensembl chr23:41,599,843...41,669,112
JBrowse link
G LOC475935 interferon-induced transmembrane protein 1-like IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr18:25,484,731...25,485,927 JBrowse link
G LOC483397 interferon-induced transmembrane protein 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr18:25,494,018...25,495,114 JBrowse link
G LOC488622 interferon-activable protein 203 ISO (PMID:22291595) UniProtKB PMID:22291595 NCBI chr38:22,874,345...22,892,362 JBrowse link
G LOC488947 interferon-induced protein with tetratricopeptide repeats 1 IEA Ensembl GO_REF:0000107 NCBI chr 4:125,675...133,304
Ensembl chr 4:84,720...132,981
JBrowse link
G LOC611500 phospholipid scramblase 1 IEA Ensembl GO_REF:0000107 NCBI chr23:41,639,938...41,668,972
Ensembl chr23:41,599,843...41,669,112
JBrowse link
G LTF lactotransferrin IEA Ensembl GO_REF:0000107 NCBI chr20:42,231,994...42,263,202
Ensembl chr20:42,231,994...42,263,202
JBrowse link
G MAVS mitochondrial antiviral signaling protein IEA Ensembl GO_REF:0000107 NCBI chr24:17,510,209...17,529,286
Ensembl chr24:17,512,761...17,523,807
JBrowse link
G MX1 MX dynamin like GTPase 1 ISO (PMID:14687945), (PMID:15047845), (PMID:16202617)
(PMID:24500530)
UniProtKB
AgBase
PMID:14687945, PMID:15047845, PMID:16202617, PMID:24500530 NCBI chr31:35,898,206...35,929,802
Ensembl chr31:35,860,590...35,951,350
JBrowse link
G OAS1 2'-5'-oligoadenylate synthetase 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr26:10,385,393...10,396,734
Ensembl chr26:10,385,447...10,396,733
JBrowse link
G OAS2 2'-5'-oligoadenylate synthetase 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr26:10,431,881...10,450,085
Ensembl chr26:10,432,042...10,449,009
JBrowse link
G OAS3 2'-5'-oligoadenylate synthetase 3 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr26:10,404,548...10,423,039
Ensembl chr26:10,404,414...10,423,039
JBrowse link
G OASL oligoadenylate synthetase-like 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr26:16,855,386...16,869,102
Ensembl chr26:16,855,386...16,869,102
JBrowse link
G OASL 2'-5'-oligoadenylate synthetase like IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr26:16,837,376...16,850,388
Ensembl chr26:16,837,376...16,850,388
JBrowse link
G PROX1 prospero homeobox 1 IEA Ensembl GO_REF:0000107 NCBI chr 7:11,996,282...12,047,693
Ensembl chr 7:11,996,703...12,044,036
JBrowse link
G RNASEL ribonuclease L IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:15,978,055...16,001,604
Ensembl chr 7:15,856,151...16,001,569
JBrowse link
G RSAD2 radical S-adenosyl methionine domain containing 2 IEA Ensembl GO_REF:0000107 NCBI chr17:4,488,202...4,508,705
Ensembl chr17:4,487,957...4,507,181
JBrowse link
G SHFL shiftless antiviral inhibitor of ribosomal frameshifting IEA Ensembl GO_REF:0000107 NCBI chr20:50,961,557...50,966,261
Ensembl chr20:50,961,551...50,965,961
JBrowse link
G SLPI secretory leukocyte peptidase inhibitor IEA Ensembl GO_REF:0000107 NCBI chr24:32,566,030...32,568,406
Ensembl chr24:32,566,026...32,568,420
JBrowse link
G SRPK1 SRSF protein kinase 1 IEA Ensembl GO_REF:0000107 NCBI chr12:4,941,292...5,029,580
Ensembl chr12:4,917,297...5,030,255
JBrowse link
G SRPK2 SRSF protein kinase 2 IEA Ensembl GO_REF:0000107 NCBI chr18:14,991,187...15,243,124
Ensembl chr18:14,999,422...15,236,393
JBrowse link
G TNF tumor necrosis factor IEA Ensembl GO_REF:0000107 NCBI chr12:1,074,561...1,076,425
Ensembl chr12:1,074,552...1,076,425
JBrowse link
G TRIM6 tripartite motif containing 6 IEA Ensembl GO_REF:0000107 NCBI chr21:28,595,887...28,611,562
Ensembl chr21:28,595,448...28,611,124
JBrowse link
G ZC3HAV1 zinc finger CCCH-type containing, antiviral 1 IEA Ensembl GO_REF:0000107 NCBI chr16:9,598,339...9,660,540
Ensembl chr16:9,598,405...9,664,569
JBrowse link
negative regulation of viral life cycle term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HMOX1 heme oxygenase 1 ISO (PMID:25086213) AgBase PMID:25086213 NCBI chr10:28,744,404...28,751,544
Ensembl chr10:28,743,795...28,751,773
JBrowse link
G IL32 interleukin 32 ISO (PMID:23729669) ARUK-UCL PMID:23729669 NCBI chr 6:38,119,287...38,122,979 JBrowse link
G LOC403581 peptidylprolyl isomerase A (cyclophilin A) pseudogene ISO (PMID:19207730), (PMID:22347431) UniProt PMID:19207730, PMID:22347431 NCBI chr 7:80,937,433...80,938,175 JBrowse link
negative regulation of viral release from host cell term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHMP3 charged multivesicular body protein 3 ISO (PMID:16740483) UniProtKB PMID:16740483 NCBI chr17:38,600,793...38,658,368 JBrowse link
G LOC488347 tripartite motif-containing protein 26 ISO (PMID:18248090) UniProtKB PMID:18248090 NCBI chr35:26,386,575...26,395,549 JBrowse link
G MID2 midline 2 IEA Ensembl GO_REF:0000107 NCBI chr  X:81,267,037...81,467,613
Ensembl chr  X:81,296,249...81,463,210
JBrowse link
G PML PML nuclear body scaffold IEA Ensembl GO_REF:0000107 NCBI chr30:37,232,337...37,278,434
Ensembl chr30:37,232,306...37,277,741
JBrowse link
G TRIM11 tripartite motif containing 11 IEA Ensembl GO_REF:0000107 NCBI chr14:640,375...647,427 JBrowse link
G TRIM13 tripartite motif containing 13 IEA Ensembl GO_REF:0000107 NCBI chr22:1,877,672...1,893,097
Ensembl chr22:1,871,181...1,910,055
JBrowse link
G TRIM21 tripartite motif containing 21 IEA Ensembl GO_REF:0000107 NCBI chr21:26,775,227...26,783,180
Ensembl chr21:26,775,672...26,783,725
JBrowse link
G TRIM25 tripartite motif containing 25 IEA Ensembl GO_REF:0000107 NCBI chr 9:31,703,628...31,725,674
Ensembl chr 9:31,707,034...31,725,762
JBrowse link
G TRIM27 tripartite motif containing 27 IEA Ensembl GO_REF:0000107 NCBI chr35:25,904,381...25,922,531
Ensembl chr35:25,905,396...25,923,336
JBrowse link
G TRIM28 tripartite motif containing 28 ISO (PMID:18248090) UniProtKB PMID:18248090 NCBI chr 1:99,408,920...99,415,432
Ensembl chr 1:99,408,925...99,415,146
JBrowse link
G TRIM32 tripartite motif containing 32 IEA Ensembl GO_REF:0000107 NCBI chr11:70,453,130...70,465,030
Ensembl chr11:70,462,007...70,463,974
JBrowse link
G TRIM35 tripartite motif containing 35 IEA Ensembl GO_REF:0000107 NCBI chr25:30,276,673...30,307,059
Ensembl chr25:30,276,763...30,300,769
JBrowse link
G TRIM56 tripartite motif containing 56 ISO (MGI:MGI:5545996|PMID:18248090) UniProtKB PMID:18248090 MGI:MGI:5545996 NCBI chr 6:8,744,970...8,752,896
Ensembl chr 6:8,749,438...8,751,753
JBrowse link
G TRIM8 tripartite motif containing 8 IEA Ensembl GO_REF:0000107 NCBI chr28:15,124,310...15,138,660
Ensembl chr28:15,123,348...15,146,355
JBrowse link
negative regulation of viral transcription term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HEXIM1 HEXIM P-TEFb complex subunit 1 ISO (PMID:18249148) FlyBase PMID:18249148 NCBI chr 9:18,384,811...18,387,981 JBrowse link
G LARP7 La ribonucleoprotein 7, transcriptional regulator ISO (PMID:18249148), (PMID:18483487) FlyBase PMID:18249148, PMID:18483487 NCBI chr32:32,421,648...32,439,431
Ensembl chr32:32,421,675...32,439,131
JBrowse link
G LOC475935 interferon-induced transmembrane protein 1-like ISO (PMID:20943977) UniProtKB PMID:20943977 NCBI chr18:25,484,731...25,485,927 JBrowse link
G MID2 midline 2 IEA Ensembl GO_REF:0000107 NCBI chr  X:81,267,037...81,467,613
Ensembl chr  X:81,296,249...81,463,210
JBrowse link
G SP100 SP100 nuclear antigen ISO (PMID:16873258) BHF-UCL PMID:16873258 NCBI chr25:42,538,428...42,635,825
Ensembl chr25:42,538,571...42,635,649
JBrowse link
G TRIM11 tripartite motif containing 11 IEA Ensembl GO_REF:0000107 NCBI chr14:640,375...647,427 JBrowse link
G TRIM13 tripartite motif containing 13 IEA Ensembl GO_REF:0000107 NCBI chr22:1,877,672...1,893,097
Ensembl chr22:1,871,181...1,910,055
JBrowse link
G TRIM14 tripartite motif containing 14 IEA Ensembl GO_REF:0000107 NCBI chr11:55,313,700...55,343,217
Ensembl chr11:55,316,111...55,343,287
JBrowse link
G TRIM21 tripartite motif containing 21 IEA Ensembl GO_REF:0000107 NCBI chr21:26,775,227...26,783,180
Ensembl chr21:26,775,672...26,783,725
JBrowse link
G TRIM27 tripartite motif containing 27 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr35:25,904,381...25,922,531
Ensembl chr35:25,905,396...25,923,336
JBrowse link
G TRIM32 tripartite motif containing 32 IEA Ensembl GO_REF:0000107 NCBI chr11:70,453,130...70,465,030
Ensembl chr11:70,462,007...70,463,974
JBrowse link
G TRIM62 tripartite motif containing 62 IEA Ensembl GO_REF:0000107 NCBI chr 2:68,247,138...68,265,530
Ensembl chr 2:68,247,139...68,264,754
JBrowse link
G TRIM8 tripartite motif containing 8 IEA Ensembl GO_REF:0000107 NCBI chr28:15,124,310...15,138,660
Ensembl chr28:15,123,348...15,146,355
JBrowse link
G UBP1 upstream binding protein 1 IEA Ensembl GO_REF:0000107 NCBI chr23:3,445,730...3,498,242
Ensembl chr23:3,444,758...3,497,263
JBrowse link
G ZFP36 ZFP36 ring finger protein ISO (PMID:14679154) UniProtKB PMID:14679154 NCBI chr 1:113,815,972...113,818,093
Ensembl chr 1:113,816,273...113,818,065
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16187
    negative regulation of biological process 5381
      negative regulation of viral process 106
        negative regulation by host of viral process + 15
        negative regulation by virus of viral protein levels in host cell 2
        negative regulation of transformation of host cell by virus 1
        negative regulation of viral genome replication + 57
        negative regulation of viral life cycle + 23
        negative regulation of viral release from host cell + 15
        negative regulation of viral transcription + 30
        negative regulation of viral translation 0
Path 2
Term Annotations click to browse term
  biological_process 16187
    biological regulation 11555
      regulation of biological process 10957
        regulation of symbiotic process 220
          regulation of viral process 205
            negative regulation of viral process 106
              negative regulation by host of viral process + 15
              negative regulation by virus of viral protein levels in host cell 2
              negative regulation of transformation of host cell by virus 1
              negative regulation of viral genome replication + 57
              negative regulation of viral life cycle + 23
              negative regulation of viral release from host cell + 15
              negative regulation of viral transcription + 30
              negative regulation of viral translation 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.