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ONTOLOGY REPORT - ANNOTATIONS


Term:negative regulation of viral process
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Accession:GO:0048525 term browser browse the term
Definition:Any process that stops, prevents, or reduces the frequency, rate or extent of a multi-organism process in which a virus is a participant.
Synonyms:narrow_synonym: down regulation of viral life cycle;   downregulation of viral life cycle;   inhibition of viral life cycle;   negative regulation of viral life cycle;   negative regulation of viral reproduction


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negative regulation of viral process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APCS amyloid P component, serum IDA (PMID:23544079) BHF-UCL PMID:23544079 NCBI chr 1:159,587,826...159,588,865
Ensembl chr 1:159,587,826...159,588,865
JBrowse link
G APOBEC3F apolipoprotein B mRNA editing enzyme catalytic subunit 3F IDA (PMID:17121840) HGNC PMID:17121840 NCBI chr22:39,019,081...39,055,972
Ensembl chr22:39,040,604...39,055,972
JBrowse link
G APOBEC3G apolipoprotein B mRNA editing enzyme catalytic subunit 3G IDA (PMID:17121840) HGNC PMID:17121840 NCBI chr22:39,077,005...39,087,743
Ensembl chr22:39,077,067...39,087,743
JBrowse link
G APOBEC3H apolipoprotein B mRNA editing enzyme catalytic subunit 3H IMP (PMID:18827027) UniProtKB PMID:18827027 NCBI chr22:39,097,203...39,104,067
Ensembl chr22:39,097,224...39,104,067
JBrowse link
G CREBBP CREB binding protein ISO (MGI:MGI:2151262|PMID:11583620) CAFA PMID:11583620 MGI:MGI:2151262 NCBI chr16:3,725,054...3,880,727
Ensembl chr16:3,725,054...3,880,713
Ensembl chr16:3,725,054...3,880,713
JBrowse link
G LTF lactotransferrin IMP (PMID:25193851) AgBase PMID:25193851 NCBI chr 3:46,435,645...46,485,234
Ensembl chr 3:46,435,645...46,485,234
JBrowse link
G MBL2 mannose binding lectin 2 IDA (PMID:23544079) BHF-UCL PMID:23544079 NCBI chr10:52,765,380...52,772,784
Ensembl chr10:52,765,380...52,772,784
Ensembl chr10:52,765,380...52,772,784
JBrowse link
modulation by host of viral RNA-binding transcription factor activity term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUCKS1 nuclear casein kinase and cyclin dependent kinase substrate 1 IGI (PMID:25116364) ParkinsonsUK-UCL PMID:25116364 NCBI chr 1:205,712,822...205,750,220
Ensembl chr 1:205,712,822...205,750,182
JBrowse link
modulation by host of viral transcription term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PSMC3 proteasome 26S subunit, ATPase 3 IDA (PMID:2194290), (PMID:8419915) GO_Central PMID:2194290, PMID:8419915 NCBI chr11:47,418,775...47,426,473
Ensembl chr11:47,418,769...47,426,473
JBrowse link
negative regulation by host of viral genome replication term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCL8 C-C motif chemokine ligand 8 IDA (PMID:20181935) ARUK-UCL PMID:20181935 NCBI chr17:34,319,435...34,321,402
Ensembl chr17:34,319,435...34,321,402
JBrowse link
G CCNK cyclin K IDA (PMID:21555514) CACAO PMID:21555514 NCBI chr14:99,481,409...99,512,440
Ensembl chr14:99,481,169...99,535,044
JBrowse link
G CEACAM1 CEA cell adhesion molecule 1 ISO (MGI:MGI:55926|PMID:6327825) MGI PMID:6327825 MGI:MGI:55926 NCBI chr19:42,507,306...42,528,482
Ensembl chr19:42,507,304...42,561,234
JBrowse link
G DDX3X DEAD-box helicase 3 X-linked ISO (PMID:24380861) AgBase PMID:24380861 NCBI chr  X:41,333,308...41,364,472
Ensembl chr  X:41,333,348...41,364,472
Ensembl chr  X:41,333,348...41,364,472
JBrowse link
G EIF2AK4 eukaryotic translation initiation factor 2 alpha kinase 4 ISS UniProtKB GO_REF:0000024 NCBI chr15:39,934,115...40,035,591
Ensembl chr15:39,934,115...40,035,591
JBrowse link
G PRKN parkin RBR E3 ubiquitin protein ligase IDA (PMID:25244949) AgBase PMID:25244949 NCBI chr 6:161,347,417...162,727,802
Ensembl chr 6:161,347,417...162,727,771
Ensembl chr 6:161,347,417...162,727,771
JBrowse link
G VAPA VAMP associated protein A IDA (PMID:19515777) AgBase PMID:19515777 NCBI chr18:9,914,016...9,960,021
Ensembl chr18:9,914,002...9,960,021
Ensembl chr18:9,914,002...9,960,021
JBrowse link
G VAPB VAMP associated protein B and C IDA (PMID:19515777) AgBase PMID:19515777 NCBI chr20:58,389,211...58,451,101
Ensembl chr20:58,389,229...58,451,101
Ensembl chr20:58,389,229...58,451,101
JBrowse link
G ZBED1 zinc finger BED-type containing 1 IDA (PMID:25210186) UniProt PMID:25210186 NCBI chr  X:2,486,435...2,500,976
NCBI chr  Y:2,486,435...2,500,976
Ensembl chr  X:2,486,414...2,500,976
JBrowse link
G ZC3H12A zinc finger CCCH-type containing 12A IDA (PMID:23355615) UniProtKB PMID:23355615 NCBI chr 1:37,474,518...37,484,377
Ensembl chr 1:37,474,580...37,484,377
JBrowse link
negative regulation by host of viral glycoprotein metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APCS amyloid P component, serum IDA (PMID:23544079) BHF-UCL PMID:23544079 NCBI chr 1:159,587,826...159,588,865
Ensembl chr 1:159,587,826...159,588,865
JBrowse link
G PTX3 pentraxin 3 IDA (PMID:23544079) BHF-UCL PMID:23544079 NCBI chr 3:157,436,850...157,443,633
Ensembl chr 3:157,436,850...157,443,633
JBrowse link
negative regulation by host of viral process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APCS amyloid P component, serum IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:159,587,826...159,588,865
Ensembl chr 1:159,587,826...159,588,865
JBrowse link
G CEACAM1 CEA cell adhesion molecule 1 ISO (MGI:MGI:3848729|PMID:19358828)
(MGI:MGI:1098064|PMID:9343248)
(MGI:MGI:2148352|PMID:11483763)
MGI PMID:9343248, PMID:11483763, PMID:19358828 MGI:MGI:1098064, MGI:MGI:2148352, MGI:MGI:3848729 NCBI chr19:42,507,306...42,528,482
Ensembl chr19:42,507,304...42,561,234
JBrowse link
G CRP C-reactive protein IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:159,712,289...159,714,589
Ensembl chr 1:159,712,289...159,714,589
JBrowse link
G LTF lactotransferrin IMP (PMID:12522210) AgBase PMID:12522210 NCBI chr 3:46,435,645...46,485,234
Ensembl chr 3:46,435,645...46,485,234
JBrowse link
G PTX3 pentraxin 3 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:157,436,850...157,443,633
Ensembl chr 3:157,436,850...157,443,633
JBrowse link
negative regulation by host of viral release from host cell term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G VAPB VAMP associated protein B and C IDA (PMID:19515777) AgBase PMID:19515777 NCBI chr20:58,389,211...58,451,101
Ensembl chr20:58,389,229...58,451,101
Ensembl chr20:58,389,229...58,451,101
JBrowse link
negative regulation by host of viral transcription term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCL3 C-C motif chemokine ligand 3 IDA (PMID:10841574) UniProtKB PMID:10841574 NCBI chr17:36,088,256...36,090,143
Ensembl chr17:36,088,256...36,090,169
JBrowse link
G CCL4 C-C motif chemokine ligand 4 IDA (PMID:10841574) UniProtKB PMID:10841574 NCBI chr17:36,103,827...36,105,614
Ensembl chr17:36,103,827...36,105,621
JBrowse link
G CCL4L1 C-C motif chemokine ligand 4 like 1 IDA (PMID:10841574) UniProtKB PMID:10841574 Ensembl chr17:36,210,924...36,212,878 JBrowse link
G CCL5 C-C motif chemokine ligand 5 IDA (PMID:10841574) UniProtKB PMID:10841574 NCBI chr17:35,871,491...35,880,360
Ensembl chr17:35,871,491...35,880,793
JBrowse link
G HDAC1 histone deacetylase 1 IMP (PMID:16540471) UniProtKB PMID:16540471 NCBI chr 1:32,292,083...32,333,628
Ensembl chr 1:32,292,083...32,333,635
JBrowse link
G HMGA2 high mobility group AT-hook 2 IDA (PMID:17005673) UniProtKB PMID:17005673 NCBI chr12:65,824,460...65,966,291
Ensembl chr12:65,824,460...65,966,291
Ensembl chr12:65,824,460...65,966,291
JBrowse link
G HMOX1 heme oxygenase 1 ISO (PMID:25086213) AgBase PMID:25086213 NCBI chr22:35,381,096...35,394,207
Ensembl chr22:35,380,361...35,394,207
JBrowse link
G INPP5K inositol polyphosphate-5-phosphatase K IDA (PMID:18774950) UniProtKB PMID:18774950 NCBI chr17:1,494,575...1,516,735
Ensembl chr17:1,494,577...1,516,742
JBrowse link
G JUN Jun proto-oncogene, AP-1 transcription factor subunit IDA (PMID:2833704) UniProtKB PMID:2833704 NCBI chr 1:58,780,791...58,784,047
Ensembl chr 1:58,780,791...58,784,047
JBrowse link
G POU2F3 POU class 2 homeobox 3 IDA (PMID:14645924) UniProtKB PMID:14645924 NCBI chr11:120,236,638...120,319,945
Ensembl chr11:120,236,640...120,319,945
JBrowse link
G REST RE1 silencing transcription factor IDA (PMID:17555596) UniProtKB PMID:17555596 NCBI chr 4:56,907,900...56,935,847
Ensembl chr 4:56,907,876...56,966,808
Ensembl chr 4:56,907,876...56,966,808
JBrowse link
G TARDBP TAR DNA binding protein IDA (PMID:7745706) BHF-UCL PMID:7745706 NCBI chr 1:11,012,654...11,030,528
Ensembl chr 1:11,012,662...11,030,528
Ensembl chr 1:11,012,662...11,030,528
Ensembl chr 1:11,012,662...11,030,528
JBrowse link
G TFAP4 transcription factor AP-4 NAS
IDA
(PMID:7933101)
(PMID:14645924), (PMID:16540471)
UniProtKB PMID:7933101, PMID:14645924, PMID:16540471 NCBI chr16:4,257,186...4,273,023
Ensembl chr16:4,257,186...4,273,075
JBrowse link
G ZNF639 zinc finger protein 639 IMP (PMID:20484494) UniProtKB PMID:20484494 NCBI chr 3:179,322,876...179,338,583
Ensembl chr 3:179,323,031...179,338,583
JBrowse link
negative regulation by virus of viral protein levels in host cell term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G STAT1 signal transducer and activator of transcription 1 IMP (PMID:15825084) AgBase PMID:15825084 NCBI chr 2:190,968,989...191,014,197
Ensembl chr 2:190,908,460...191,020,960
Ensembl chr 2:190,908,460...191,020,960
JBrowse link
G VAPB VAMP associated protein B and C IDA (PMID:19515777) AgBase PMID:19515777 NCBI chr20:58,389,211...58,451,101
Ensembl chr20:58,389,229...58,451,101
Ensembl chr20:58,389,229...58,451,101
JBrowse link
negative regulation of intracellular transport of viral material term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BST2 bone marrow stromal cell antigen 2 IDA (PMID:19036818), (PMID:20686043), (PMID:20943977) UniProtKB PMID:19036818, PMID:20686043, PMID:20943977 NCBI chr19:17,402,939...17,405,630
Ensembl chr19:17,402,939...17,405,630
JBrowse link
G MX1 MX dynamin like GTPase 1 ISO (PMID:20167191) AgBase PMID:20167191 NCBI chr21:41,420,329...41,459,214
Ensembl chr21:41,420,304...41,459,214
JBrowse link
G TRIM15 tripartite motif containing 15 IMP (PMID:18248090) UniProtKB PMID:18248090 NCBI chr 6:30,163,546...30,172,693
Ensembl chr 6:30,163,206...30,172,693
JBrowse link
negative regulation of single stranded viral RNA replication via double stranded DNA intermediate term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AICDA activation induced cytidine deaminase IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:8,602,170...8,612,970
Ensembl chr12:8,602,170...8,612,867
JBrowse link
G APOBEC3A apolipoprotein B mRNA editing enzyme catalytic subunit 3A IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr22:38,957,609...38,963,184
Ensembl chr22:38,952,741...38,992,778
JBrowse link
G APOBEC3A_B APOBEC3A and APOBEC3B deletion hybrid IBA (PMID:21873635) GO_Central PMID:21873635 Ensembl chr22:38,952,741...38,992,778 JBrowse link
G APOBEC3B apolipoprotein B mRNA editing enzyme catalytic subunit 3B IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr22:38,982,347...38,992,779
Ensembl chr22:38,982,347...38,992,804
JBrowse link
G APOBEC3C apolipoprotein B mRNA editing enzyme catalytic subunit 3C IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr22:39,014,236...39,020,352
Ensembl chr22:39,014,257...39,020,352
JBrowse link
G APOBEC3D apolipoprotein B mRNA editing enzyme catalytic subunit 3D IDA
IBA
(PMID:21835787)
(PMID:21873635)
UniProtKB
GO_Central
PMID:21835787, PMID:21873635 NCBI chr22:39,021,127...39,033,277
Ensembl chr22:39,021,113...39,033,277
JBrowse link
G APOBEC3F apolipoprotein B mRNA editing enzyme catalytic subunit 3F IDA
IBA
(PMID:17121840), (PMID:21835787)
(PMID:21873635)
HGNC
GO_Central
PMID:17121840, PMID:21835787, PMID:21873635 NCBI chr22:39,019,081...39,055,972
Ensembl chr22:39,040,604...39,055,972
JBrowse link
G APOBEC3G apolipoprotein B mRNA editing enzyme catalytic subunit 3G IDA
IBA
(PMID:16571802), (PMID:17121840), (PMID:21835787)
(PMID:21873635)
UniProtKB
GO_Central
PMID:16571802, PMID:17121840, PMID:21835787, PMID:21873635 NCBI chr22:39,077,005...39,087,743
Ensembl chr22:39,077,067...39,087,743
JBrowse link
G APOBEC3H apolipoprotein B mRNA editing enzyme catalytic subunit 3H IDA
IBA
(PMID:18779051), (PMID:21835787)
(PMID:21873635)
UniProtKB
GO_Central
PMID:18779051, PMID:21835787, PMID:21873635 NCBI chr22:39,097,203...39,104,067
Ensembl chr22:39,097,224...39,104,067
JBrowse link
G HMGA2 high mobility group AT-hook 2 IDA (PMID:17005673) UniProtKB PMID:17005673 NCBI chr12:65,824,460...65,966,291
Ensembl chr12:65,824,460...65,966,291
Ensembl chr12:65,824,460...65,966,291
JBrowse link
G INPP5K inositol polyphosphate-5-phosphatase K IDA (PMID:18774950) UniProtKB PMID:18774950 NCBI chr17:1,494,575...1,516,735
Ensembl chr17:1,494,577...1,516,742
JBrowse link
G MORC2 MORC family CW-type zinc finger 2 ISS
IMP
(PMID:29211708) UniProt PMID:29211708 GO_REF:0000024 NCBI chr22:30,925,130...30,968,774
Ensembl chr22:30,925,130...30,968,774
JBrowse link
G MPHOSPH8 M-phase phosphoprotein 8 IMP (PMID:29211708) UniProt PMID:29211708 NCBI chr13:19,633,648...19,673,441
Ensembl chr13:19,633,659...19,673,441
JBrowse link
G RESF1 retroelement silencing factor 1 ISS UniProt GO_REF:0000024 NCBI chr12:31,959,415...31,993,107
Ensembl chr12:31,959,370...31,993,107
JBrowse link
G SETDB1 SET domain bifurcated histone lysine methyltransferase 1 ISS UniProt GO_REF:0000024 NCBI chr 1:150,926,263...150,964,737
Ensembl chr 1:150,926,263...150,964,744
JBrowse link
G TASOR transcription activation suppressor IMP (PMID:29211708) UniProt PMID:29211708 NCBI chr 3:56,620,132...56,683,265
Ensembl chr 3:56,620,133...56,683,237
JBrowse link
G TRIM28 tripartite motif containing 28 IEA Ensembl GO_REF:0000107 NCBI chr19:58,544,064...58,550,722
Ensembl chr19:58,544,064...58,550,722
JBrowse link
G ZNF684 zinc finger protein 684 ISO (MGI:MGI:3842857|PMID:19270682) MGI PMID:19270682 MGI:MGI:3842857 NCBI chr 1:40,531,637...40,548,167
Ensembl chr 1:40,531,573...40,548,167
JBrowse link
negative regulation of transformation of host cell by virus term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FBLN1 fibulin 1 IMP (PMID:12200142) UniProtKB PMID:12200142 NCBI chr22:45,502,883...45,601,135
Ensembl chr22:45,502,238...45,601,135
JBrowse link
negative regulation of viral entry into host cell term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APCS amyloid P component, serum IDA (PMID:23544079) BHF-UCL PMID:23544079 NCBI chr 1:159,587,826...159,588,865
Ensembl chr 1:159,587,826...159,588,865
JBrowse link
G FCN1 ficolin 1 IDA (PMID:22851708) UniProtKB PMID:22851708 NCBI chr 9:134,903,232...134,917,912
Ensembl chr 9:134,903,232...134,917,912
JBrowse link
G FCN3 ficolin 3 IMP (PMID:22851708) UniProtKB PMID:22851708 NCBI chr 1:27,369,110...27,374,852
Ensembl chr 1:27,369,110...27,374,824
Ensembl chr 1:27,369,110...27,374,824
JBrowse link
G GSN gelsolin IMP (PMID:23575248) UniProtKB PMID:23575248 NCBI chr 9:121,201,483...121,332,844
Ensembl chr 9:121,207,794...121,332,843
JBrowse link
G IFITM1 interferon induced transmembrane protein 1 IDA
IBA
(PMID:21253575), (PMID:23358889)
(PMID:21873635)
UniProtKB
GO_Central
PMID:21253575, PMID:21873635, PMID:23358889 NCBI chr11:314,040...315,272
Ensembl chr11:313,506...315,272
JBrowse link
G IFITM2 interferon induced transmembrane protein 2 IDA
IBA
(PMID:21253575), (PMID:23358889)
(PMID:21873635)
UniProtKB
GO_Central
PMID:21253575, PMID:21873635, PMID:23358889 NCBI chr11:308,107...309,410
Ensembl chr11:307,631...315,272
JBrowse link
G IFITM3 interferon induced transmembrane protein 3 IMP
IBA
IDA
(PMID:23358889)
(PMID:21873635)
(PMID:20943977), (PMID:21253575)
CACAO
GO_Central
UniProtKB
PMID:20943977, PMID:21253575, PMID:21873635, PMID:23358889 NCBI chr11:319,676...320,860
Ensembl chr11:319,676...327,537
JBrowse link
G IFNA2 interferon alpha 2 IDA (PMID:22783022) BHF-UCL PMID:22783022 NCBI chr 9:21,384,255...21,385,398
Ensembl chr 9:21,384,255...21,385,398
JBrowse link
G LY6E lymphocyte antigen 6 family member E IDA (PMID:32641482), (PMID:32704094) UniProt PMID:32641482, PMID:32704094 NCBI chr 8:143,018,529...143,022,409
Ensembl chr 8:143,017,982...143,023,832
JBrowse link
G MID2 midline 2 IDA (PMID:18248090) UniProtKB PMID:18248090 NCBI chr  X:107,825,735...107,931,637
Ensembl chr  X:107,825,755...107,927,193
JBrowse link
G MRE11 MRE11 homolog, double strand break repair nuclease ISO RGD PMID:22850678 RGD:8693392 NCBI chr11:94,415,570...94,512,701
Ensembl chr11:94,415,578...94,493,908
Ensembl chr11:94,415,578...94,493,908
JBrowse link
G NBN nibrin ISO RGD PMID:22850678 RGD:8693392 NCBI chr 8:89,933,331...89,984,698
Ensembl chr 8:89,933,336...90,003,228
Ensembl chr 8:89,933,336...90,003,228
JBrowse link
G PTX3 pentraxin 3 IDA (PMID:23544079) BHF-UCL PMID:23544079 NCBI chr 3:157,436,850...157,443,633
Ensembl chr 3:157,436,850...157,443,633
JBrowse link
G RAD50 RAD50 double strand break repair protein ISO RGD PMID:22850678 RGD:8693392 NCBI chr 5:132,556,977...132,646,349
Ensembl chr 5:132,556,019...132,646,349
JBrowse link
G SNX3 sorting nexin 3 IDA (PMID:18767904) UniProtKB PMID:18767904 NCBI chr 6:108,211,222...108,261,040
Ensembl chr 6:108,211,222...108,261,246
JBrowse link
G TRIM10 tripartite motif containing 10 IEA Ensembl GO_REF:0000107 NCBI chr 6:30,151,939...30,163,216
Ensembl chr 6:30,151,943...30,161,211
JBrowse link
G TRIM11 tripartite motif containing 11 IMP (PMID:18248090) UniProtKB PMID:18248090 NCBI chr 1:228,393,672...228,406,835
Ensembl chr 1:228,393,673...228,406,835
JBrowse link
G TRIM25 tripartite motif containing 25 IEA Ensembl GO_REF:0000107 NCBI chr17:56,887,909...56,914,049
Ensembl chr17:56,836,387...56,914,080
JBrowse link
G TRIM26 tripartite motif containing 26 IDA (PMID:18248090) UniProtKB PMID:18248090 NCBI chr 6:30,184,453...30,213,435
Ensembl chr 6:30,184,455...30,213,427
JBrowse link
G TRIM31 tripartite motif containing 31 IMP (PMID:18248090) UniProtKB PMID:18248090 NCBI chr 6:30,102,892...30,113,090
Ensembl chr 6:30,102,897...30,113,090
JBrowse link
G TRIM5 tripartite motif containing 5 IDA (PMID:18248090) UniProtKB PMID:18248090 NCBI chr11:5,590,906...5,685,108
Ensembl chr11:5,663,195...5,938,619
JBrowse link
G TRIM56 tripartite motif containing 56 ISO (MGI:MGI:5545996|PMID:18248090) UniProtKB PMID:18248090 MGI:MGI:5545996 NCBI chr 7:101,085,424...101,097,967
Ensembl chr 7:101,085,481...101,097,967
JBrowse link
G TRIM59 tripartite motif containing 59 IEA Ensembl GO_REF:0000107 NCBI chr 3:160,435,503...160,449,786
Ensembl chr 3:160,432,445...160,485,773
JBrowse link
G TRIM8 tripartite motif containing 8 IEA Ensembl GO_REF:0000107 NCBI chr10:102,644,479...102,658,319
Ensembl chr10:102,644,479...102,658,318
Ensembl chr10:102,644,479...102,658,318
JBrowse link
negative regulation of viral genome replication term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAR adenosine deaminase RNA specific ISO (MGI:MGI:4939544|PMID:21173229) MGI PMID:21173229 MGI:MGI:4939544 NCBI chr 1:154,582,057...154,627,997
Ensembl chr 1:154,582,057...154,628,013
JBrowse link
G APOBEC3A apolipoprotein B mRNA editing enzyme catalytic subunit 3A IDA (PMID:16527742) UniProtKB PMID:16527742 NCBI chr22:38,957,609...38,963,184
Ensembl chr22:38,952,741...38,992,778
JBrowse link
G APOBEC3A_B APOBEC3A and APOBEC3B deletion hybrid IDA (PMID:16527742) UniProtKB PMID:16527742 Ensembl chr22:38,952,741...38,992,778 JBrowse link
G APOBEC3C apolipoprotein B mRNA editing enzyme catalytic subunit 3C IDA (PMID:21632763) UniProtKB PMID:21632763 NCBI chr22:39,014,236...39,020,352
Ensembl chr22:39,014,257...39,020,352
JBrowse link
G APOBEC3F apolipoprotein B mRNA editing enzyme catalytic subunit 3F IDA (PMID:16378963), (PMID:17121840) BHF-UCL PMID:16378963, PMID:17121840 NCBI chr22:39,019,081...39,055,972
Ensembl chr22:39,040,604...39,055,972
JBrowse link
G APOBEC3G apolipoprotein B mRNA editing enzyme catalytic subunit 3G IDA (PMID:16378963), (PMID:17121840) UniProtKB PMID:16378963, PMID:17121840 NCBI chr22:39,077,005...39,087,743
Ensembl chr22:39,077,067...39,087,743
JBrowse link
G APOBEC3H apolipoprotein B mRNA editing enzyme catalytic subunit 3H ISO (MGI:MGI:5486557|PMID:16378963) UniProtKB PMID:16378963 MGI:MGI:5486557 NCBI chr22:39,097,203...39,104,067
Ensembl chr22:39,097,224...39,104,067
JBrowse link
G BANF1 BAF nuclear assembly factor 1 IDA (PMID:18005698) UniProtKB PMID:18005698 NCBI chr11:66,002,079...66,004,149
Ensembl chr11:66,002,228...66,004,149
JBrowse link
G BST2 bone marrow stromal cell antigen 2 IDA (PMID:20943977) UniProtKB PMID:20943977 NCBI chr19:17,402,939...17,405,630
Ensembl chr19:17,402,939...17,405,630
JBrowse link
G BTBD17 BTB domain containing 17 ISS UniProtKB GO_REF:0000024 NCBI chr17:74,356,416...74,363,655
Ensembl chr17:74,356,416...74,361,868
JBrowse link
G CCL5 C-C motif chemokine ligand 5 IDA (PMID:10490959) BHF-UCL PMID:10490959 NCBI chr17:35,871,491...35,880,360
Ensembl chr17:35,871,491...35,880,793
JBrowse link
G EIF2AK2 eukaryotic translation initiation factor 2 alpha kinase 2 IMP (PMID:19189853), (PMID:19840259) UniProtKB PMID:19189853, PMID:19840259 NCBI chr 2:37,099,210...37,157,065
Ensembl chr 2:37,099,210...37,157,065
JBrowse link
G FAM111A family with sequence similarity 111 member A IMP (PMID:23093934) UniProtKB PMID:23093934 NCBI chr11:59,142,856...59,155,039
Ensembl chr11:59,142,748...59,155,039
JBrowse link
G IFI16 interferon gamma inducible protein 16 IDA (PMID:22291595) UniProtKB PMID:22291595 NCBI chr 1:158,999,976...159,055,151
Ensembl chr 1:158,999,968...159,055,155
JBrowse link
G IFIT1 interferon induced protein with tetratricopeptide repeats 1 IMP (PMID:19008854), (PMID:21976647) UniProtKB PMID:19008854, PMID:21976647 NCBI chr10:89,392,623...89,406,487
Ensembl chr10:89,392,546...89,406,487
JBrowse link
G IFIT5 interferon induced protein with tetratricopeptide repeats 5 IDA (PMID:23774268) UniProtKB PMID:23774268 NCBI chr10:89,414,568...89,420,997
Ensembl chr10:89,414,568...89,420,997
JBrowse link
G IFITM1 interferon induced transmembrane protein 1 IDA
IBA
IMP
(PMID:21253575)
(PMID:21873635)
(PMID:21976647)
UniProtKB
GO_Central
PMID:21253575, PMID:21873635, PMID:21976647 NCBI chr11:314,040...315,272
Ensembl chr11:313,506...315,272
JBrowse link
G IFITM2 interferon induced transmembrane protein 2 IDA
IBA
(PMID:21253575)
(PMID:21873635)
UniProtKB
GO_Central
PMID:21253575, PMID:21873635 NCBI chr11:308,107...309,410
Ensembl chr11:307,631...315,272
JBrowse link
G IFITM3 interferon induced transmembrane protein 3 IDA
IBA
(PMID:20943977), (PMID:21253575)
(PMID:21873635)
UniProtKB
GO_Central
PMID:20943977, PMID:21253575, PMID:21873635 NCBI chr11:319,676...320,860
Ensembl chr11:319,676...327,537
JBrowse link
G IFNB1 interferon beta 1 IDA (PMID:19008854) BHF-UCL PMID:19008854 NCBI chr 9:21,077,104...21,077,942
Ensembl chr 9:21,077,104...21,077,942
JBrowse link
G IFNL3 interferon lambda 3 ISS UniProtKB GO_REF:0000024 NCBI chr19:39,243,553...39,245,077
Ensembl chr19:39,243,553...39,245,129
JBrowse link
G ILF3 interleukin enhancer binding factor 3 ISS UniProtKB GO_REF:0000024 NCBI chr19:10,654,295...10,692,400
Ensembl chr19:10,654,261...10,692,417
JBrowse link
G ISG15 ISG15 ubiquitin like modifier IMP (PMID:19357168) UniProtKB PMID:19357168 NCBI chr 1:1,013,497...1,014,540
Ensembl chr 1:1,001,138...1,014,540
JBrowse link
G ISG20 interferon stimulated exonuclease gene 20 IMP
IBA
(PMID:21036379)
(PMID:21873635)
UniProtKB
GO_Central
PMID:21036379, PMID:21873635 NCBI chr15:88,635,614...88,656,483
Ensembl chr15:88,636,153...88,656,483
JBrowse link
G LTF lactotransferrin IMP (PMID:25193851) AgBase PMID:25193851 NCBI chr 3:46,435,645...46,485,234
Ensembl chr 3:46,435,645...46,485,234
JBrowse link
G MAVS mitochondrial antiviral signaling protein IDA (PMID:20451243) UniProtKB PMID:20451243 NCBI chr20:3,846,834...3,876,118
Ensembl chr20:3,846,799...3,876,123
JBrowse link
G MX1 MX dynamin like GTPase 1 IDA (PMID:14687945), (PMID:15047845), (PMID:16202617) UniProtKB PMID:14687945, PMID:15047845, PMID:16202617 NCBI chr21:41,420,329...41,459,214
Ensembl chr21:41,420,304...41,459,214
JBrowse link
G OAS1 2'-5'-oligoadenylate synthetase 1 IDA
IBA
(PMID:18931074), (PMID:19923450)
(PMID:21873635)
UniProtKB
GO_Central
PMID:18931074, PMID:19923450, PMID:21873635 NCBI chr12:112,906,956...112,933,219
Ensembl chr12:112,906,783...112,933,222
JBrowse link
G OAS2 2'-5'-oligoadenylate synthetase 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:112,978,466...113,011,723
Ensembl chr12:112,978,395...113,011,723
JBrowse link
G OAS3 2'-5'-oligoadenylate synthetase 3 IDA
IBA
(PMID:19056102), (PMID:19923450)
(PMID:21873635)
UniProtKB
GO_Central
PMID:19056102, PMID:19923450, PMID:21873635 NCBI chr12:112,938,463...112,973,251
Ensembl chr12:112,938,444...112,973,251
JBrowse link
G OASL 2'-5'-oligoadenylate synthetase like IDA
IBA
(PMID:18931074), (PMID:20074559)
(PMID:21873635)
UniProtKB
GO_Central
PMID:18931074, PMID:20074559, PMID:21873635 NCBI chr12:121,018,882...121,039,242
Ensembl chr12:121,019,111...121,039,242
JBrowse link
G PARP10 poly(ADP-ribose) polymerase family member 10 IMP (PMID:22176891) UniProtKB PMID:22176891 NCBI chr 8:143,977,158...143,986,460
Ensembl chr 8:143,977,153...144,012,772
JBrowse link
G PLSCR1 phospholipid scramblase 1 IMP (PMID:15308695) UniProtKB PMID:15308695 NCBI chr 3:146,515,178...146,544,805
Ensembl chr 3:146,515,180...146,544,856
JBrowse link
G PROX1 prospero homeobox 1 IDA (PMID:19264593) BHF-UCL PMID:19264593 NCBI chr 1:213,983,239...214,041,510
Ensembl chr 1:213,983,181...214,041,510
JBrowse link
G RNASEL ribonuclease L IDA
IBA
(PMID:19923450)
(PMID:21873635)
UniProtKB
GO_Central
PMID:19923450, PMID:21873635 NCBI chr 1:182,573,634...182,589,285
Ensembl chr 1:182,573,634...182,589,256
JBrowse link
G RSAD2 radical S-adenosyl methionine domain containing 2 IDA (PMID:21957124) UniProtKB PMID:21957124 NCBI chr 2:6,865,733...6,898,239
Ensembl chr 2:6,865,806...6,898,239
JBrowse link
G SHFL shiftless antiviral inhibitor of ribosomal frameshifting IMP (PMID:26735137) UniProtKB PMID:26735137 NCBI chr19:10,086,119...10,093,249
Ensembl chr19:10,086,122...10,093,252
JBrowse link
G SLPI secretory leukocyte peptidase inhibitor IDA (PMID:19333378) UniProtKB PMID:19333378 NCBI chr20:45,252,239...45,254,564
Ensembl chr20:45,252,239...45,254,564
JBrowse link
G SRPK1 SRSF protein kinase 1 IDA (PMID:12417631) BHF-UCL PMID:12417631 NCBI chr 6:35,832,966...35,921,098
Ensembl chr 6:35,832,966...35,921,342
JBrowse link
G SRPK2 SRSF protein kinase 2 IDA (PMID:12417631) BHF-UCL PMID:12417631 NCBI chr 7:105,110,708...105,399,363
Ensembl chr 7:105,110,704...105,399,308
JBrowse link
G TNF tumor necrosis factor IDA (PMID:10490959) BHF-UCL PMID:10490959 NCBI chr 6:31,575,565...31,578,336
Ensembl chr 6:31,575,565...31,578,336
JBrowse link
G TNIP1 TNFAIP3 interacting protein 1 TAS (PMID:9923610) UniProtKB PMID:9923610 NCBI chr 5:151,029,943...151,087,685
Ensembl chr 5:151,029,945...151,093,577
JBrowse link
G TRIM6 tripartite motif containing 6 IMP (PMID:24882218) UniProtKB PMID:24882218 NCBI chr11:5,596,111...5,612,952
Ensembl chr11:5,596,109...5,612,958
JBrowse link
G ZC3HAV1 zinc finger CCCH-type containing, antiviral 1 IDA (PMID:21102435), (PMID:21876179) UniProtKB PMID:21102435, PMID:21876179 NCBI chr 7:139,043,515...139,109,720
Ensembl chr 7:139,043,515...139,109,720
JBrowse link
negative regulation of viral life cycle term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HMOX1 heme oxygenase 1 ISO (PMID:25086213) AgBase PMID:25086213 NCBI chr22:35,381,096...35,394,207
Ensembl chr22:35,380,361...35,394,207
JBrowse link
G IL32 interleukin 32 IDA (PMID:23729669) ARUK-UCL PMID:23729669 NCBI chr16:3,065,403...3,069,530
Ensembl chr16:3,065,297...3,082,192
JBrowse link
G PPIA peptidylprolyl isomerase A IMP (PMID:19207730), (PMID:22347431) UniProt PMID:19207730, PMID:22347431 NCBI chr 7:44,795,960...44,803,117
Ensembl chr 7:44,796,680...44,824,564
JBrowse link
negative regulation of viral release from host cell term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHMP3 charged multivesicular body protein 3 IMP (PMID:16740483) UniProtKB PMID:16740483 NCBI chr 2:86,503,430...86,563,443
Ensembl chr 2:86,503,430...86,563,479
JBrowse link
G MID2 midline 2 IDA (PMID:18248090) UniProtKB PMID:18248090 NCBI chr  X:107,825,735...107,931,637
Ensembl chr  X:107,825,755...107,927,193
JBrowse link
G PML PML nuclear body scaffold IDA (PMID:18248090) UniProtKB PMID:18248090 NCBI chr15:73,994,716...74,047,827
Ensembl chr15:73,994,673...74,047,827
JBrowse link
G RNF103-CHMP3 RNF103-CHMP3 readthrough IMP (PMID:16740483) UniProtKB PMID:16740483 NCBI chr 2:86,503,430...86,721,122
Ensembl chr 2:86,505,668...86,721,122
JBrowse link
G TRIM11 tripartite motif containing 11 IDA
IMP
(PMID:18248090) UniProtKB PMID:18248090 NCBI chr 1:228,393,672...228,406,835
Ensembl chr 1:228,393,673...228,406,835
JBrowse link
G TRIM13 tripartite motif containing 13 IDA (PMID:18248090) UniProtKB PMID:18248090 NCBI chr13:49,997,042...50,018,467
Ensembl chr13:49,995,888...50,020,481
JBrowse link
G TRIM15 tripartite motif containing 15 IDA
IMP
(PMID:18248090) UniProtKB PMID:18248090 NCBI chr 6:30,163,546...30,172,693
Ensembl chr 6:30,163,206...30,172,693
JBrowse link
G TRIM21 tripartite motif containing 21 IDA (PMID:18248090) UniProtKB PMID:18248090 NCBI chr11:4,384,897...4,393,702
Ensembl chr11:4,384,897...4,393,702
JBrowse link
G TRIM25 tripartite motif containing 25 IEA Ensembl GO_REF:0000107 NCBI chr17:56,887,909...56,914,049
Ensembl chr17:56,836,387...56,914,080
JBrowse link
G TRIM26 tripartite motif containing 26 IDA (PMID:18248090) UniProtKB PMID:18248090 NCBI chr 6:30,184,453...30,213,435
Ensembl chr 6:30,184,455...30,213,427
JBrowse link
G TRIM27 tripartite motif containing 27 IEA Ensembl GO_REF:0000107 NCBI chr 6:28,903,002...28,923,985
Ensembl chr 6:28,903,002...28,923,988
JBrowse link
G TRIM28 tripartite motif containing 28 IDA (PMID:18248090) UniProtKB PMID:18248090 NCBI chr19:58,544,064...58,550,722
Ensembl chr19:58,544,064...58,550,722
JBrowse link
G TRIM32 tripartite motif containing 32 IDA (PMID:18248090) UniProtKB PMID:18248090 NCBI chr 9:116,687,305...116,701,299
Ensembl chr 9:116,687,302...116,701,300
JBrowse link
G TRIM35 tripartite motif containing 35 IDA (PMID:18248090) UniProtKB PMID:18248090 NCBI chr 8:27,284,886...27,311,272
Ensembl chr 8:27,284,886...27,311,272
JBrowse link
G TRIM5 tripartite motif containing 5 IDA (PMID:18248090) UniProtKB PMID:18248090 NCBI chr11:5,590,906...5,685,108
Ensembl chr11:5,663,195...5,938,619
JBrowse link
G TRIM56 tripartite motif containing 56 ISO (MGI:MGI:5545996|PMID:18248090) UniProtKB PMID:18248090 MGI:MGI:5545996 NCBI chr 7:101,085,424...101,097,967
Ensembl chr 7:101,085,481...101,097,967
JBrowse link
G TRIM8 tripartite motif containing 8 IDA (PMID:18248090) UniProtKB PMID:18248090 NCBI chr10:102,644,479...102,658,319
Ensembl chr10:102,644,479...102,658,318
Ensembl chr10:102,644,479...102,658,318
JBrowse link
negative regulation of viral transcription term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HEXIM1 HEXIM P-TEFb complex subunit 1 IMP (PMID:18249148) FlyBase PMID:18249148 NCBI chr17:45,148,475...45,152,099
Ensembl chr17:45,148,502...45,152,101
Ensembl chr17:45,148,502...45,152,101
JBrowse link
G IFITM3 interferon induced transmembrane protein 3 IDA (PMID:20943977) UniProtKB PMID:20943977 NCBI chr11:319,676...320,860
Ensembl chr11:319,676...327,537
JBrowse link
G LARP7 La ribonucleoprotein 7, transcriptional regulator IMP (PMID:18249148), (PMID:18483487) FlyBase PMID:18249148, PMID:18483487 NCBI chr 4:112,637,143...112,657,586
Ensembl chr 4:112,637,107...112,657,592
JBrowse link
G MID2 midline 2 IDA (PMID:18248090) UniProtKB PMID:18248090 NCBI chr  X:107,825,735...107,931,637
Ensembl chr  X:107,825,755...107,927,193
JBrowse link
G SP100 SP100 nuclear antigen IDA (PMID:16873258) BHF-UCL PMID:16873258 NCBI chr 2:230,416,201...230,545,606
Ensembl chr 2:230,415,942...230,545,606
JBrowse link
G TRIM11 tripartite motif containing 11 IDA (PMID:18248090) UniProtKB PMID:18248090 NCBI chr 1:228,393,672...228,406,835
Ensembl chr 1:228,393,673...228,406,835
JBrowse link
G TRIM13 tripartite motif containing 13 IDA (PMID:18248090) UniProtKB PMID:18248090 NCBI chr13:49,997,042...50,018,467
Ensembl chr13:49,995,888...50,020,481
JBrowse link
G TRIM14 tripartite motif containing 14 IDA (PMID:18248090) UniProtKB PMID:18248090 NCBI chr 9:98,072,014...98,119,420
Ensembl chr 9:98,069,275...98,119,222
JBrowse link
G TRIM21 tripartite motif containing 21 IDA (PMID:18248090) UniProtKB PMID:18248090 NCBI chr11:4,384,897...4,393,702
Ensembl chr11:4,384,897...4,393,702
JBrowse link
G TRIM27 tripartite motif containing 27 IDA
IBA
(PMID:18248090)
(PMID:21873635)
UniProtKB
GO_Central
PMID:18248090, PMID:21873635 NCBI chr 6:28,903,002...28,923,985
Ensembl chr 6:28,903,002...28,923,988
JBrowse link
G TRIM31 tripartite motif containing 31 IDA (PMID:18248090) UniProtKB PMID:18248090 NCBI chr 6:30,102,892...30,113,090
Ensembl chr 6:30,102,897...30,113,090
JBrowse link
G TRIM32 tripartite motif containing 32 IDA (PMID:18248090) UniProtKB PMID:18248090 NCBI chr 9:116,687,305...116,701,299
Ensembl chr 9:116,687,302...116,701,300
JBrowse link
G TRIM62 tripartite motif containing 62 IDA (PMID:18248090) UniProtKB PMID:18248090 NCBI chr 1:33,145,399...33,184,774
Ensembl chr 1:33,145,399...33,182,059
JBrowse link
G TRIM8 tripartite motif containing 8 IEA Ensembl GO_REF:0000107 NCBI chr10:102,644,479...102,658,319
Ensembl chr10:102,644,479...102,658,318
Ensembl chr10:102,644,479...102,658,318
JBrowse link
G UBP1 upstream binding protein 1 IDA (PMID:8114710) GO_Central PMID:8114710 NCBI chr 3:33,388,336...33,440,405
Ensembl chr 3:33,388,336...33,441,371
JBrowse link
G ZFP36 ZFP36 ring finger protein IMP (PMID:14679154) UniProtKB PMID:14679154 NCBI chr19:39,406,847...39,409,407
Ensembl chr19:39,406,847...39,409,412
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18670
    negative regulation of biological process 6172
      negative regulation of viral process 123
        negative regulation by host of viral process + 16
        negative regulation by virus of viral protein levels in host cell 2
        negative regulation of transformation of host cell by virus 1
        negative regulation of viral genome replication + 66
        negative regulation of viral life cycle + 30
        negative regulation of viral release from host cell + 18
        negative regulation of viral transcription + 32
        negative regulation of viral translation 0
Path 2
Term Annotations click to browse term
  biological_process 18670
    biological regulation 13308
      regulation of biological process 12640
        regulation of symbiotic process 263
          regulation of viral process 246
            negative regulation of viral process 123
              negative regulation by host of viral process + 16
              negative regulation by virus of viral protein levels in host cell 2
              negative regulation of transformation of host cell by virus 1
              negative regulation of viral genome replication + 66
              negative regulation of viral life cycle + 30
              negative regulation of viral release from host cell + 18
              negative regulation of viral transcription + 32
              negative regulation of viral translation 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.