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ONTOLOGY REPORT - ANNOTATIONS


Term:negative regulation of viral process
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Accession:GO:0048525 term browser browse the term
Definition:Any process that stops, prevents, or reduces the frequency, rate or extent of a multi-organism process in which a virus is a participant.
Synonyms:narrow_synonym: down regulation of viral life cycle;   downregulation of viral life cycle;   inhibition of viral life cycle;   negative regulation of viral life cycle;   negative regulation of viral reproduction


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negative regulation of viral process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apcs serum amyloid P-component ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 1:172,893,961...172,895,054
Ensembl chr 1:172,893,961...172,895,041
JBrowse link
G Apobec3 apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3 ISO (PMID:18827027) UniProtKB PMID:18827027 NCBI chr15:79,892,058...79,918,218
Ensembl chr15:79,891,659...79,915,906
JBrowse link
G Crebbp CREB binding protein IMP (MGI:MGI:2151262|PMID:11583620) CAFA PMID:11583620 MGI:MGI:2151262 NCBI chr16:4,081,334...4,213,957
Ensembl chr16:4,081,328...4,213,997
JBrowse link
G Ltf lactotransferrin ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 9:111,019,292...111,042,766
Ensembl chr 9:111,019,271...111,042,767
JBrowse link
G Mbl2 mannose-binding lectin (protein C) 2 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr19:30,232,906...30,239,687
Ensembl chr19:30,232,942...30,239,687
JBrowse link
G Oas1a 2'-5' oligoadenylate synthetase 1A IDA (MGI:MGI:81990|PMID:2171206) MGI PMID:2171206 MGI:MGI:81990 NCBI chr 5:120,896,256...120,907,544
Ensembl chr 5:120,896,256...120,907,521
JBrowse link
modulation by host of viral RNA-binding transcription factor activity term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nucks1 nuclear casein kinase and cyclin-dependent kinase substrate 1 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 1:131,910,458...131,936,321
Ensembl chr 1:131,910,534...131,936,321
JBrowse link
modulation by host of viral transcription term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Psmc3 proteasome (prosome, macropain) 26S subunit, ATPase 3 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 2:91,054,016...91,059,438
Ensembl chr 2:91,054,009...91,066,369
JBrowse link
negative regulation by host of viral genome replication term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccl8 chemokine (C-C motif) ligand 8 ISO (PMID:20181935) ARUK-UCL PMID:20181935 NCBI chr11:82,115,185...82,116,799
Ensembl chr11:82,115,185...82,116,799
JBrowse link
G Ccnk cyclin K ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr12:108,179,308...108,203,359
Ensembl chr12:108,179,579...108,203,359
JBrowse link
G Ceacam1 carcinoembryonic antigen-related cell adhesion molecule 1 IMP (MGI:MGI:55926|PMID:6327825) MGI PMID:6327825 MGI:MGI:55926 NCBI chr 7:25,461,702...25,477,647
Ensembl chr 7:25,461,707...25,477,603
JBrowse link
G Ddx3x DEAD box helicase 3, X-linked ISO (PMID:24380861) AgBase PMID:24380861 NCBI chr  X:13,280,496...13,293,988
Ensembl chr  X:13,280,970...13,294,052
JBrowse link
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 IDA (MGI:MGI:5700304|PMID:16601681) UniProtKB PMID:16601681 MGI:MGI:5700304 NCBI chr 2:118,388,583...118,475,234
Ensembl chr 2:118,388,618...118,475,234
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr17:10,840,359...12,063,370
Ensembl chr17:10,840,384...12,063,361
JBrowse link
G Vapa vesicle-associated membrane protein, associated protein A ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr17:65,580,053...65,616,462
Ensembl chr17:65,578,327...65,613,555
JBrowse link
G Vapb vesicle-associated membrane protein, associated protein B and C ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 2:173,737,571...173,784,336
Ensembl chr 2:173,737,511...173,784,339
JBrowse link
G Zc3h12a zinc finger CCCH type containing 12A ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 4:125,118,414...125,127,881
Ensembl chr 4:125,118,423...125,127,840
JBrowse link
negative regulation by host of viral glycoprotein metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apcs serum amyloid P-component ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 1:172,893,961...172,895,054
Ensembl chr 1:172,893,961...172,895,041
JBrowse link
G Ptx3 pentraxin related gene ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 3:66,219,887...66,225,806
Ensembl chr 3:66,219,910...66,225,805
JBrowse link
negative regulation by host of viral process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apcs serum amyloid P-component IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 1:172,893,961...172,895,054
Ensembl chr 1:172,893,961...172,895,041
JBrowse link
G Ceacam1 carcinoembryonic antigen-related cell adhesion molecule 1 IMP
IDA
(MGI:MGI:2148352|PMID:11483763)
(MGI:MGI:1098064|PMID:9343248)
(MGI:MGI:3848729|PMID:19358828)
MGI PMID:9343248, PMID:11483763, PMID:19358828 MGI:MGI:1098064, MGI:MGI:2148352, MGI:MGI:3848729 NCBI chr 7:25,461,702...25,477,647
Ensembl chr 7:25,461,707...25,477,603
JBrowse link
G Crp C-reactive protein, pentraxin-related IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 1:172,698,056...172,699,966
Ensembl chr 1:172,698,055...172,833,031
JBrowse link
G Ltf lactotransferrin ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 9:111,019,292...111,042,766
Ensembl chr 9:111,019,271...111,042,767
JBrowse link
G Mptx1 mucosal pentraxin 1 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 1:174,330,518...174,332,877
Ensembl chr 1:174,330,518...174,332,873
JBrowse link
G Mptx2 mucosal pentraxin 2 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 1:173,274,461...173,277,756
Ensembl chr 1:173,274,382...173,277,777
JBrowse link
G Ptx3 pentraxin related gene IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 3:66,219,887...66,225,806
Ensembl chr 3:66,219,910...66,225,805
JBrowse link
negative regulation by host of viral release from host cell term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Vapb vesicle-associated membrane protein, associated protein B and C ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 2:173,737,571...173,784,336
Ensembl chr 2:173,737,511...173,784,339
JBrowse link
negative regulation by host of viral transcription term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccl3 chemokine (C-C motif) ligand 3 ISO (PMID:10841574) UniProtKB PMID:10841574 NCBI chr11:83,647,843...83,649,378
Ensembl chr11:83,647,844...83,649,355
JBrowse link
G Ccl4 chemokine (C-C motif) ligand 4 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr11:83,648,624...83,664,683
Ensembl chr11:83,662,584...83,664,683
JBrowse link
G Ccl5 chemokine (C-C motif) ligand 5 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr11:83,525,778...83,530,518
Ensembl chr11:83,525,778...83,530,518
JBrowse link
G Hdac1 histone deacetylase 1 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 4:129,516,104...129,542,646
Ensembl chr 4:129,516,104...129,542,713
JBrowse link
G Hmga2 high mobility group AT-hook 2 ISO (PMID:17005673) UniProtKB PMID:17005673 NCBI chr10:120,361,268...120,476,469
Ensembl chr10:120,361,275...120,476,469
JBrowse link
G Hmox1 heme oxygenase 1 ISO (PMID:25086213) AgBase PMID:25086213 NCBI chr 8:75,093,618...75,100,593
Ensembl chr 8:75,093,621...75,100,589
JBrowse link
G Inpp5k inositol polyphosphate 5-phosphatase K ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr11:75,629,067...75,648,865
Ensembl chr11:75,630,988...75,648,871
JBrowse link
G Jun jun proto-oncogene ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 4:95,049,036...95,052,222
Ensembl chr 4:95,049,034...95,052,222
JBrowse link
G Pou2f3 POU domain, class 2, transcription factor 3 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 9:43,123,927...43,205,755
Ensembl chr 9:43,123,939...43,210,369
JBrowse link
G Rest RE1-silencing transcription factor ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 5:77,265,494...77,286,432
Ensembl chr 5:77,265,491...77,286,432
JBrowse link
G Tardbp TAR DNA binding protein ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 4:148,612,382...148,627,084
Ensembl chr 4:148,612,382...148,627,019
JBrowse link
G Tfap4 transcription factor AP4 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr16:4,544,661...4,560,762
Ensembl chr16:4,544,661...4,559,854
JBrowse link
G Zfp639 zinc finger protein 639 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 3:32,510,264...32,520,833
Ensembl chr 3:32,510,259...32,520,833
JBrowse link
negative regulation by virus of viral protein levels in host cell term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Stat1 signal transducer and activator of transcription 1 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 1:52,119,438...52,161,865
Ensembl chr 1:52,119,440...52,161,865
JBrowse link
G Vapb vesicle-associated membrane protein, associated protein B and C ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 2:173,737,571...173,784,336
Ensembl chr 2:173,737,511...173,784,339
JBrowse link
negative regulation of intracellular transport of viral material term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bst2 bone marrow stromal cell antigen 2 IDA
IMP
(MGI:MGI:5437427|PMID:20686043)
(MGI:MGI:5437405|PMID:22284121), (MGI:MGI:5448513|PMID:21919738)
UniProtKB PMID:20686043, PMID:21919738, PMID:22284121 MGI:MGI:5437405, MGI:MGI:5437427, MGI:MGI:5448513 NCBI chr 8:71,534,255...71,537,472
Ensembl chr 8:71,534,255...71,537,456
JBrowse link
G Mx2 MX dynamin-like GTPase 2 ISO (PMID:20167191) AgBase PMID:20167191 NCBI chr16:97,536,081...97,560,901
Ensembl chr16:97,535,308...97,560,900
JBrowse link
G Trim15 tripartite motif-containing 15 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr17:36,860,690...36,867,367
Ensembl chr17:36,860,691...36,867,210
JBrowse link
negative regulation of single stranded viral RNA replication via double stranded DNA intermediate term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aicda activation-induced cytidine deaminase IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 6:122,553,809...122,564,180
Ensembl chr 6:122,553,801...122,564,180
JBrowse link
G Apobec3 apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr15:79,892,058...79,918,218
Ensembl chr15:79,891,659...79,915,906
JBrowse link
G Hmga2 high mobility group AT-hook 2 ISO (PMID:17005673) UniProtKB PMID:17005673 NCBI chr10:120,361,268...120,476,469
Ensembl chr10:120,361,275...120,476,469
JBrowse link
G Inpp5k inositol polyphosphate 5-phosphatase K ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr11:75,629,067...75,648,865
Ensembl chr11:75,630,988...75,648,871
JBrowse link
G Morc2a microrchidia 2A IMP
ISO
(MGI:MGI:6271895|PMID:29728365) UniProt
MGI
PMID:29728365 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:6271895 NCBI chr11:3,649,189...3,690,477
Ensembl chr11:3,649,191...3,690,477
JBrowse link
G Mphosph8 M-phase phosphoprotein 8 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr14:56,668,235...56,697,430
Ensembl chr14:56,668,248...56,697,430
JBrowse link
G Resf1 retroelement silencing factor 1 IMP (MGI:MGI:6271895|PMID:29728365) UniProt PMID:29728365 MGI:MGI:6271895 NCBI chr 6:149,309,409...149,335,663
Ensembl chr 6:149,309,414...149,335,663
JBrowse link
G Setdb1 SET domain, bifurcated 1 IMP (MGI:MGI:5440670|PMID:20164836), (MGI:MGI:6271895|PMID:29728365) UniProt PMID:20164836, PMID:29728365 MGI:MGI:5440670, MGI:MGI:6271895 NCBI chr 3:95,323,525...95,357,202
Ensembl chr 3:95,323,525...95,357,202
JBrowse link
G Tasor transcription activation suppressor ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr14:27,423,674...27,483,555
Ensembl chr14:27,428,834...27,483,555
JBrowse link
G Trim28 tripartite motif-containing 28 IGI
IMP
IDA
(MGI:MGI:3842857|PMID:19270682)
(MGI:MGI:3842857|PMID:19270682), (MGI:MGI:5440670|PMID:20164836)
MGI PMID:19270682, PMID:20164836 MGI:MGI:3842857, MGI:MGI:5440670 NCBI chr 7:13,024,152...13,031,032
Ensembl chr 7:12,999,114...13,031,035
JBrowse link
G Zfp809 zinc finger protein 809 IMP
IDA
IGI
(MGI:MGI:3842857|PMID:19270682) MGI PMID:19270682 MGI:MGI:3842857 NCBI chr 9:22,225,667...22,254,117
Ensembl chr 9:22,225,714...22,243,354
JBrowse link
negative regulation of transformation of host cell by virus term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fbln1 fibulin 1 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr15:85,205,949...85,286,294
Ensembl chr15:85,205,949...85,286,535
JBrowse link
negative regulation of viral entry into host cell term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apcs serum amyloid P-component ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 1:172,893,961...172,895,054
Ensembl chr 1:172,893,961...172,895,041
JBrowse link
G Fcna ficolin A ISO (PMID:22851708) UniProtKB PMID:22851708 NCBI chr 2:25,624,665...25,635,440
Ensembl chr 2:25,624,666...25,628,030
JBrowse link
G Fcnb ficolin B ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 2:28,076,479...28,084,910
Ensembl chr 2:28,076,378...28,084,885
JBrowse link
G Gsn gelsolin ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 2:35,256,359...35,307,902
Ensembl chr 2:35,256,380...35,307,892
JBrowse link
G Ifitm1 interferon induced transmembrane protein 1 IDA
IBA
(MGI:MGI:5437420|PMID:21253575), (MGI:MGI:5780029|PMID:25738301)
(MGI:MGI:6201960|PMID:21873635)
UniProtKB
GO_Central
PMID:21253575, PMID:21873635, PMID:25738301 MGI:MGI:5437420, MGI:MGI:5780029, MGI:MGI:6201960 NCBI chr 7:140,967,429...140,969,827
Ensembl chr 7:140,967,221...140,969,825
JBrowse link
G Ifitm2 interferon induced transmembrane protein 2 IDA
IBA
ISO
(MGI:MGI:5437420|PMID:21253575)
(MGI:MGI:6201960|PMID:21873635)
UniProtKB
GO_Central
MGI
PMID:21253575, PMID:21873635 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:5437420, MGI:MGI:6201960 NCBI chr 7:140,954,837...140,959,686
Ensembl chr 7:140,954,837...140,955,987
JBrowse link
G Ifitm3 interferon induced transmembrane protein 3 IDA
IBA
ISO
(MGI:MGI:5437420|PMID:21253575)
(MGI:MGI:6201960|PMID:21873635)
UniProtKB
GO_Central
MGI
PMID:21253575, PMID:21873635 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:5437420, MGI:MGI:6201960 NCBI chr 7:141,009,590...141,010,744
Ensembl chr 7:141,009,586...141,010,770
JBrowse link
G Ifitm6 interferon induced transmembrane protein 6 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 7:141,015,812...141,016,892
Ensembl chr 7:141,015,699...141,017,924
JBrowse link
G Ifitm7 interferon induced transmembrane protein 7 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr16:13,981,702...13,986,867
Ensembl chr16:13,981,699...13,986,888
JBrowse link
G Ly6e lymphocyte antigen 6 complex, locus E IMP
ISO
(MGI:MGI:6448667|PMID:32704094) UniProt
MGI
PMID:32704094 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:6448667 NCBI chr15:74,955,025...74,959,904
Ensembl chr15:74,955,051...74,959,905
JBrowse link
G Mid2 midline 2 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr  X:140,664,304...140,767,715
Ensembl chr  X:140,664,599...140,767,715
JBrowse link
G Mre11a MRE11A homolog A, double strand break repair nuclease ISO RGD GO_REF:0000096, MGI:MGI:4417868 NCBI chr 9:14,784,654...14,837,125
Ensembl chr 9:14,784,654...14,837,123
JBrowse link
G Nbn nibrin ISO RGD GO_REF:0000096, MGI:MGI:4417868 NCBI chr 4:15,957,587...15,992,589
Ensembl chr 4:15,957,925...15,992,589
JBrowse link
G Ptx3 pentraxin related gene ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 3:66,219,887...66,225,806
Ensembl chr 3:66,219,910...66,225,805
JBrowse link
G Rad50 RAD50 double strand break repair protein ISO RGD GO_REF:0000096, MGI:MGI:4417868 NCBI chr11:53,649,519...53,707,319
Ensembl chr11:53,649,519...53,707,319
JBrowse link
G Snx3 sorting nexin 3 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr10:42,502,054...42,535,369
Ensembl chr10:42,502,030...42,535,381
JBrowse link
G Trim10 tripartite motif-containing 10 IDA (MGI:MGI:5545996|PMID:18248090) UniProtKB PMID:18248090 MGI:MGI:5545996 NCBI chr17:36,869,496...36,877,833
Ensembl chr17:36,869,574...36,877,833
JBrowse link
G Trim11 tripartite motif-containing 11 IDA
ISO
(MGI:MGI:5545996|PMID:18248090) UniProtKB
MGI
PMID:18248090 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:5545996 NCBI chr11:58,973,726...58,991,462
Ensembl chr11:58,978,093...58,991,458
JBrowse link
G Trim25 tripartite motif-containing 25 IDA (MGI:MGI:5545996|PMID:18248090) UniProtKB PMID:18248090 MGI:MGI:5545996 NCBI chr11:88,999,403...89,020,294
Ensembl chr11:88,999,376...89,020,293
JBrowse link
G Trim26 tripartite motif-containing 26 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr17:36,837,123...36,859,398
Ensembl chr17:36,837,134...36,859,398
JBrowse link
G Trim31 tripartite motif-containing 31 IDA
ISO
(MGI:MGI:5545996|PMID:18248090) UniProtKB
MGI
PMID:18248090 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:5545996 NCBI chr17:36,898,130...36,910,217
Ensembl chr17:36,898,118...36,910,214
JBrowse link
G Trim5 tripartite motif-containing 5 ISO (PMID:18248090) UniProtKB PMID:18248090 NCBI chr 7:104,263,386...104,288,254
Ensembl chr 7:104,263,386...104,288,094
JBrowse link
G Trim56 tripartite motif-containing 56 IDA (MGI:MGI:5545996|PMID:18248090) UniProtKB PMID:18248090 MGI:MGI:5545996 NCBI chr 5:137,111,286...137,116,462
Ensembl chr 5:137,105,644...137,116,209
JBrowse link
G Trim59 tripartite motif-containing 59 IDA (MGI:MGI:5545996|PMID:18248090) UniProtKB PMID:18248090 MGI:MGI:5545996 NCBI chr 3:69,035,292...69,044,742
Ensembl chr 3:69,035,288...69,044,755
JBrowse link
G Trim8 tripartite motif-containing 8 IDA (MGI:MGI:5545996|PMID:18248090) UniProtKB PMID:18248090 MGI:MGI:5545996 NCBI chr19:46,501,648...46,516,805
Ensembl chr19:46,501,702...46,516,848
JBrowse link
negative regulation of viral genome replication term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adar adenosine deaminase, RNA-specific IMP (MGI:MGI:4939544|PMID:21173229) MGI PMID:21173229 MGI:MGI:4939544 NCBI chr 3:89,714,469...89,753,455
Ensembl chr 3:89,715,022...89,753,446
JBrowse link
G Apobec3 apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3 IDA (MGI:MGI:5486557|PMID:16378963) UniProtKB PMID:16378963 MGI:MGI:5486557 NCBI chr15:79,892,058...79,918,218
Ensembl chr15:79,891,659...79,915,906
JBrowse link
G Banf1 BAF nuclear assembly factor 1 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr19:5,364,633...5,366,876
Ensembl chr19:5,364,638...5,367,168
JBrowse link
G Bst2 bone marrow stromal cell antigen 2 IMP (MGI:MGI:5437405|PMID:22284121), (MGI:MGI:5448513|PMID:21919738) UniProtKB PMID:21919738, PMID:22284121 MGI:MGI:5437405, MGI:MGI:5448513 NCBI chr 8:71,534,255...71,537,472
Ensembl chr 8:71,534,255...71,537,456
JBrowse link
G Ccl5 chemokine (C-C motif) ligand 5 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr11:83,525,778...83,530,518
Ensembl chr11:83,525,778...83,530,518
JBrowse link
G Eif2ak2 eukaryotic translation initiation factor 2-alpha kinase 2 IMP
ISO
(MGI:MGI:5487533|PMID:20038207) UniProtKB
MGI
PMID:20038207 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:5487533 NCBI chr17:78,850,504...78,882,572
Ensembl chr17:78,852,564...78,882,573
JBrowse link
G Fam111a family with sequence similarity 111, member A ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr19:12,573,510...12,589,769
Ensembl chr19:12,545,740...12,589,768
JBrowse link
G Ifi204 interferon activated gene 204 ISO (PMID:22291595) UniProtKB PMID:22291595 NCBI chr 1:173,747,293...173,767,069
Ensembl chr 1:173,747,293...173,766,943
JBrowse link
G Ifit1bl1 interferon induced protein with tetratricpeptide repeats 1B like 1 ISO (PMID:19008854), (PMID:21976647) UniProtKB PMID:19008854, PMID:21976647 NCBI chr19:34,592,888...34,662,981
Ensembl chr19:34,592,891...34,601,956
JBrowse link
G Ifitm1 interferon induced transmembrane protein 1 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 7:140,967,429...140,969,827
Ensembl chr 7:140,967,221...140,969,825
JBrowse link
G Ifitm2 interferon induced transmembrane protein 2 ISO
IBA
(MGI:MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:6201960 NCBI chr 7:140,954,837...140,959,686
Ensembl chr 7:140,954,837...140,955,987
JBrowse link
G Ifitm3 interferon induced transmembrane protein 3 ISO
IBA
(MGI:MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:6201960 NCBI chr 7:141,009,590...141,010,744
Ensembl chr 7:141,009,586...141,010,770
JBrowse link
G Ifitm6 interferon induced transmembrane protein 6 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 7:141,015,812...141,016,892
Ensembl chr 7:141,015,699...141,017,924
JBrowse link
G Ifitm7 interferon induced transmembrane protein 7 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr16:13,981,702...13,986,867
Ensembl chr16:13,981,699...13,986,888
JBrowse link
G Ifnb1 interferon beta 1, fibroblast ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 4:88,522,025...88,522,794
Ensembl chr 4:88,522,025...88,522,774
JBrowse link
G Ilf3 interleukin enhancer binding factor 3 IMP (MGI:MGI:4867319|PMID:21123651) UniProtKB PMID:21123651 MGI:MGI:4867319 NCBI chr 9:21,367,731...21,405,363
Ensembl chr 9:21,367,871...21,405,361
JBrowse link
G Isg15 ISG15 ubiquitin-like modifier ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 4:156,199,424...156,200,818
Ensembl chr 4:156,199,455...156,200,796
JBrowse link
G Isg20 interferon-stimulated protein ISO
IBA
(MGI:MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:6201960 NCBI chr 7:78,913,396...78,920,396
Ensembl chr 7:78,913,424...78,920,396
JBrowse link
G Ltf lactotransferrin ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 9:111,019,292...111,042,766
Ensembl chr 9:111,019,271...111,042,767
JBrowse link
G Mavs mitochondrial antiviral signaling protein IMP
ISO
(MGI:MGI:4881394|PMID:20451243) UniProtKB
MGI
PMID:20451243 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:4881394 NCBI chr 2:131,234,063...131,248,025
Ensembl chr 2:131,234,063...131,248,025
JBrowse link
G Mx2 MX dynamin-like GTPase 2 ISO (PMID:14687945), (PMID:15047845), (PMID:16202617)
(PMID:24500530)
UniProtKB
AgBase
PMID:14687945, PMID:15047845, PMID:16202617, PMID:24500530 NCBI chr16:97,536,081...97,560,901
Ensembl chr16:97,535,308...97,560,900
JBrowse link
G Oas1a 2'-5' oligoadenylate synthetase 1A IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 5:120,896,256...120,907,544
Ensembl chr 5:120,896,256...120,907,521
JBrowse link
G Oas1c 2'-5' oligoadenylate synthetase 1C IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 5:120,800,194...120,812,540
Ensembl chr 5:120,800,194...120,812,514
JBrowse link
G Oas1d 2'-5' oligoadenylate synthetase 1D IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 5:120,914,818...120,921,648
Ensembl chr 5:120,914,536...120,921,652
JBrowse link
G Oas1e 2'-5' oligoadenylate synthetase 1E IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 5:120,786,312...120,795,530
Ensembl chr 5:120,786,226...120,795,530
JBrowse link
G Oas1f 2'-5' oligoadenylate synthetase 1F IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 5:120,847,367...120,857,986
Ensembl chr 5:120,847,367...120,857,986
JBrowse link
G Oas1g 2'-5' oligoadenylate synthetase 1G IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 5:120,876,142...120,887,613
Ensembl chr 5:120,876,142...120,887,613
JBrowse link
G Oas1h 2'-5' oligoadenylate synthetase 1H IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 5:120,861,422...120,873,506
Ensembl chr 5:120,861,421...120,873,506
JBrowse link
G Oas2 2'-5' oligoadenylate synthetase 2 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 5:120,730,333...120,749,886
Ensembl chr 5:120,730,333...120,749,853
JBrowse link
G Oas3 2'-5' oligoadenylate synthetase 3 ISO
IBA
(MGI:MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:6201960 NCBI chr 5:120,753,098...120,777,684
Ensembl chr 5:120,753,098...120,777,661
JBrowse link
G Oasl1 2'-5' oligoadenylate synthetase-like 1 ISO
IBA
(MGI:MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:6201960 NCBI chr 5:114,923,143...114,937,911
Ensembl chr 5:114,923,240...114,937,915
JBrowse link
G Oasl2 2'-5' oligoadenylate synthetase-like 2 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 5:114,896,926...114,912,245
Ensembl chr 5:114,896,936...114,912,234
JBrowse link
G Olfr1434 olfactory receptor 1434 ISO (PMID:23774268) UniProtKB PMID:23774268 NCBI chr19:12,279,854...12,283,988
Ensembl chr19:12,279,854...12,285,626
JBrowse link
G Parp10 poly (ADP-ribose) polymerase family, member 10 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr15:76,232,995...76,243,440
Ensembl chr15:76,231,174...76,243,441
JBrowse link
G Plscr1 phospholipid scramblase 1 IMP
ISO
(MGI:MGI:5284800|PMID:15308695) UniProtKB
MGI
PMID:15308695 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:5284800 NCBI chr 9:92,250,194...92,272,561
Ensembl chr 9:92,249,750...92,272,278
JBrowse link
G Prox1 prospero homeobox 1 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 1:190,118,035...190,170,827
Ensembl chr 1:190,118,035...190,170,714
JBrowse link
G Rnasel ribonuclease L (2', 5'-oligoisoadenylate synthetase-dependent) ISO
IBA
(MGI:MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:6201960 NCBI chr 1:153,749,344...153,768,690
Ensembl chr 1:153,749,426...153,764,221
JBrowse link
G Rsad2 radical S-adenosyl methionine domain containing 2 IMP
ISO
(MGI:MGI:5431072|PMID:21880757) UniProtKB
MGI
PMID:21880757 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:5431072 NCBI chr12:26,442,743...26,456,452
Ensembl chr12:26,442,746...26,456,452
JBrowse link
G Shfl shiftless antiviral inhibitor of ribosomal frameshifting ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 9:20,868,635...20,874,307
Ensembl chr 9:20,868,642...20,874,307
JBrowse link
G Slpi secretory leukocyte peptidase inhibitor ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 2:164,354,070...164,356,507
Ensembl chr 2:164,354,070...164,389,095
JBrowse link
G Srpk1 serine/arginine-rich protein specific kinase 1 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr17:28,587,648...28,622,528
Ensembl chr17:28,587,648...28,622,709
JBrowse link
G Srpk2 serine/arginine-rich protein specific kinase 2 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 5:23,503,356...23,684,642
Ensembl chr 5:23,503,264...23,684,617
JBrowse link
G Tnf tumor necrosis factor ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr17:35,199,367...35,202,007
Ensembl chr17:35,199,381...35,202,007
JBrowse link
G Trim6 tripartite motif-containing 6 IMP
ISO
(MGI:MGI:5645191|PMID:24882218) UniProtKB
MGI
PMID:24882218 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:5645191 NCBI chr 7:104,218,795...104,235,152
Ensembl chr 7:104,218,793...104,235,152
JBrowse link
G Zc3hav1 zinc finger CCCH type, antiviral 1 ISO MGI
RGD
GO_REF:0000096, MGI:MGI:4417868, MGI:MGI:4834177 NCBI chr 6:38,305,286...38,355,352
Ensembl chr 6:38,305,286...38,354,603
JBrowse link
negative regulation of viral life cycle term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmox1 heme oxygenase 1 ISO (PMID:25086213) AgBase PMID:25086213 NCBI chr 8:75,093,618...75,100,593
Ensembl chr 8:75,093,621...75,100,589
JBrowse link
G Ppia peptidylprolyl isomerase A ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr11:6,415,867...6,419,817
Ensembl chr11:6,415,443...6,419,817
JBrowse link
negative regulation of viral release from host cell term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chmp3 charged multivesicular body protein 3 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 6:71,543,831...71,582,609
Ensembl chr 6:71,543,797...71,582,609
JBrowse link
G Mid2 midline 2 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr  X:140,664,304...140,767,715
Ensembl chr  X:140,664,599...140,767,715
JBrowse link
G Pml promyelocytic leukemia IDA
ISO
(MGI:MGI:5545996|PMID:18248090) UniProtKB
MGI
PMID:18248090 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:5545996 NCBI chr 9:58,217,179...58,249,796
Ensembl chr 9:58,218,076...58,249,786
JBrowse link
G Trim11 tripartite motif-containing 11 IDA
ISO
(MGI:MGI:5545996|PMID:18248090) UniProtKB
MGI
PMID:18248090 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:5545996 NCBI chr11:58,973,726...58,991,462
Ensembl chr11:58,978,093...58,991,458
JBrowse link
G Trim13 tripartite motif-containing 13 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr14:61,598,226...61,610,287
Ensembl chr14:61,598,247...61,605,946
JBrowse link
G Trim15 tripartite motif-containing 15 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr17:36,860,690...36,867,367
Ensembl chr17:36,860,691...36,867,210
JBrowse link
G Trim21 tripartite motif-containing 21 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 7:102,557,920...102,565,482
Ensembl chr 7:102,557,921...102,565,486
JBrowse link
G Trim25 tripartite motif-containing 25 IDA (MGI:MGI:5545996|PMID:18248090) UniProtKB PMID:18248090 MGI:MGI:5545996 NCBI chr11:88,999,403...89,020,294
Ensembl chr11:88,999,376...89,020,293
JBrowse link
G Trim26 tripartite motif-containing 26 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr17:36,837,123...36,859,398
Ensembl chr17:36,837,134...36,859,398
JBrowse link
G Trim27 tripartite motif-containing 27 IDA (MGI:MGI:5545996|PMID:18248090) UniProtKB PMID:18248090 MGI:MGI:5545996 NCBI chr13:21,179,450...21,194,723
Ensembl chr13:21,179,445...21,194,724
JBrowse link
G Trim28 tripartite motif-containing 28 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 7:13,024,152...13,031,032
Ensembl chr 7:12,999,114...13,031,035
JBrowse link
G Trim32 tripartite motif-containing 32 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 4:65,604,986...65,616,240
Ensembl chr 4:65,604,986...65,616,238
JBrowse link
G Trim35 tripartite motif-containing 35 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr14:66,297,025...66,311,424
Ensembl chr14:66,297,031...66,311,424
JBrowse link
G Trim5 tripartite motif-containing 5 ISO (PMID:18248090) UniProtKB PMID:18248090 NCBI chr 7:104,263,386...104,288,254
Ensembl chr 7:104,263,386...104,288,094
JBrowse link
G Trim56 tripartite motif-containing 56 IDA (MGI:MGI:5545996|PMID:18248090) UniProtKB PMID:18248090 MGI:MGI:5545996 NCBI chr 5:137,111,286...137,116,462
Ensembl chr 5:137,105,644...137,116,209
JBrowse link
G Trim8 tripartite motif-containing 8 IDA
ISO
(MGI:MGI:5545996|PMID:18248090) UniProtKB
MGI
PMID:18248090 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:5545996 NCBI chr19:46,501,648...46,516,805
Ensembl chr19:46,501,702...46,516,848
JBrowse link
negative regulation of viral transcription term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hexim1 hexamethylene bis-acetamide inducible 1 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr11:103,116,325...103,119,725
Ensembl chr11:103,116,231...103,119,725
JBrowse link
G Ifitm3 interferon induced transmembrane protein 3 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 7:141,009,590...141,010,744
Ensembl chr 7:141,009,586...141,010,770
JBrowse link
G Larp7 La ribonucleoprotein domain family, member 7 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 3:127,536,714...127,553,349
Ensembl chr 3:127,536,714...127,553,349
JBrowse link
G Mid2 midline 2 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr  X:140,664,304...140,767,715
Ensembl chr  X:140,664,599...140,767,715
JBrowse link
G Sp100 nuclear antigen Sp100 ISO (PMID:16873258) BHF-UCL PMID:16873258 NCBI chr 1:85,649,948...85,709,998
Ensembl chr 1:85,649,988...85,709,998
JBrowse link
G Trim11 tripartite motif-containing 11 IDA
ISO
(MGI:MGI:5545996|PMID:18248090) UniProtKB
MGI
PMID:18248090 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:5545996 NCBI chr11:58,973,726...58,991,462
Ensembl chr11:58,978,093...58,991,458
JBrowse link
G Trim13 tripartite motif-containing 13 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr14:61,598,226...61,610,287
Ensembl chr14:61,598,247...61,605,946
JBrowse link
G Trim14 tripartite motif-containing 14 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 4:46,505,072...46,536,150
Ensembl chr 4:46,493,781...46,536,141
JBrowse link
G Trim21 tripartite motif-containing 21 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 7:102,557,920...102,565,482
Ensembl chr 7:102,557,921...102,565,486
JBrowse link
G Trim27 tripartite motif-containing 27 IDA
IBA
ISO
(MGI:MGI:5545996|PMID:18248090)
(MGI:MGI:6201960|PMID:21873635)
UniProtKB
GO_Central
MGI
PMID:18248090, PMID:21873635 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:5545996, MGI:MGI:6201960 NCBI chr13:21,179,450...21,194,723
Ensembl chr13:21,179,445...21,194,724
JBrowse link
G Trim31 tripartite motif-containing 31 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr17:36,898,130...36,910,217
Ensembl chr17:36,898,118...36,910,214
JBrowse link
G Trim32 tripartite motif-containing 32 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 4:65,604,986...65,616,240
Ensembl chr 4:65,604,986...65,616,238
JBrowse link
G Trim62 tripartite motif-containing 62 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 4:128,884,044...128,911,326
Ensembl chr 4:128,883,580...128,911,328
JBrowse link
G Trim8 tripartite motif-containing 8 IDA (MGI:MGI:5545996|PMID:18248090) UniProtKB PMID:18248090 MGI:MGI:5545996 NCBI chr19:46,501,648...46,516,805
Ensembl chr19:46,501,702...46,516,848
JBrowse link
G Ubp1 upstream binding protein 1 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 9:113,930,939...113,978,027
Ensembl chr 9:113,930,934...113,977,202
JBrowse link
G Zfp36 zinc finger protein 36 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 7:28,376,784...28,379,228
Ensembl chr 7:28,376,784...28,380,253
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 23392
    negative regulation of biological process 5653
      negative regulation of viral process 119
        negative regulation by host of viral process + 17
        negative regulation by virus of viral protein levels in host cell 2
        negative regulation of transformation of host cell by virus 1
        negative regulation of viral genome replication + 64
        negative regulation of viral life cycle + 30
        negative regulation of viral release from host cell + 17
        negative regulation of viral transcription + 31
        negative regulation of viral translation 0
Path 2
Term Annotations click to browse term
  biological_process 23392
    biological regulation 13113
      regulation of biological process 12479
        regulation of symbiotic process 240
          regulation of viral process 222
            negative regulation of viral process 119
              negative regulation by host of viral process + 17
              negative regulation by virus of viral protein levels in host cell 2
              negative regulation of transformation of host cell by virus 1
              negative regulation of viral genome replication + 64
              negative regulation of viral life cycle + 30
              negative regulation of viral release from host cell + 17
              negative regulation of viral transcription + 31
              negative regulation of viral translation 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.