Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:negative regulation of viral process
go back to main search page
Accession:GO:0048525 term browser browse the term
Definition:Any process that stops, prevents, or reduces the frequency, rate or extent of a multi-organism process in which a virus is a participant.
Synonyms:narrow_synonym: down regulation of viral life cycle;   downregulation of viral life cycle;   inhibition of viral life cycle;   negative regulation of viral life cycle;   negative regulation of viral reproduction


show annotations for term's descendants           Sort by:
 
negative regulation of viral process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APCS amyloid P component, serum ISO (PMID:23544079) BHF-UCL PMID:23544079 NCBI chr 4:90,900,585...90,901,854
Ensembl chr 4:90,898,686...90,901,875
JBrowse link
G APOBEC3B apolipoprotein B mRNA editing enzyme catalytic subunit 3B ISO (PMID:18827027) UniProtKB PMID:18827027 NCBI chr 5:9,098,676...9,115,965
Ensembl chr 5:9,097,719...9,116,369
JBrowse link
G CREBBP CREB binding protein ISO (MGI:MGI:2151262|PMID:11583620) CAFA PMID:11583620 MGI:MGI:2151262 NCBI chr 3:38,388,366...38,530,243
Ensembl chr 3:38,388,547...38,530,230
JBrowse link
G LTF lactotransferrin ISO (PMID:25193851) AgBase PMID:25193851 NCBI chr13:29,413,886...29,445,751
Ensembl chr13:29,413,886...29,445,737
JBrowse link
G MBL2 mannose binding lectin 2 ISO (PMID:23544079) BHF-UCL PMID:23544079 NCBI chr14:97,103,926...97,107,635
Ensembl chr14:97,102,894...97,108,936
JBrowse link
modulation by host of viral RNA-binding transcription factor activity term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUCKS1 nuclear casein kinase and cyclin dependent kinase substrate 1 IEA Ensembl GO_REF:0000107 NCBI chr 9:66,398,845...66,435,548
Ensembl chr 9:66,398,227...66,435,577
JBrowse link
modulation by host of viral transcription term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PSMC3 proteasome 26S subunit, ATPase 3 IEA Ensembl GO_REF:0000107 NCBI chr 2:15,185,482...15,191,189
Ensembl chr 2:15,066,547...15,193,085
JBrowse link
G RAPSN receptor associated protein of the synapse IEA Ensembl GO_REF:0000107 NCBI chr 2:15,166,968...15,181,011
Ensembl chr 2:15,066,547...15,193,085
JBrowse link
negative regulation by host of viral genome replication term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCL8 chemokine (C-C motif) ligand 8 IEA Ensembl GO_REF:0000107 NCBI chr12:40,740,468...40,741,970
Ensembl chr12:40,740,023...40,742,022
JBrowse link
G CCNK cyclin K IEA Ensembl GO_REF:0000107 NCBI chr 7:120,487,140...120,514,223
Ensembl chr 7:120,487,206...120,514,014
JBrowse link
G CEACAM1 CEA cell adhesion molecule 1 ISO (MGI:MGI:55926|PMID:6327825) MGI PMID:6327825 MGI:MGI:55926 NCBI chr 6:49,437,308...49,460,614 JBrowse link
G DDX3X DEAD-box helicase 3 X-linked IMP (PMID:24380861) AgBase PMID:24380861 NCBI chr  X:36,988,031...37,005,496
Ensembl chr  X:36,988,031...37,044,769
JBrowse link
G EIF2AK4 eukaryotic translation initiation factor 2 alpha kinase 4 ISO (MGI:MGI:5700304|PMID:16601681) UniProtKB PMID:16601681 MGI:MGI:5700304 NCBI chr 1:131,244,818...131,355,240
Ensembl chr 1:131,245,463...131,355,224
JBrowse link
G PRKN parkin RBR E3 ubiquitin protein ligase IEA Ensembl GO_REF:0000107 NCBI chr 1:5,698,508...6,731,132
Ensembl chr 1:5,465,511...6,730,881
JBrowse link
G VAPA VAMP associated protein A IEA Ensembl GO_REF:0000107 NCBI chr 6:98,212,335...98,254,272
Ensembl chr 6:98,207,580...98,254,288
JBrowse link
G VAPB VAMP associated protein B and C ISO (PMID:19515777) AgBase PMID:19515777 NCBI chr17:58,594,749...58,644,925
Ensembl chr17:58,594,749...58,644,918
JBrowse link
G ZBED1 zinc finger BED-type containing 1 IEA Ensembl GO_REF:0000107
G ZC3H12A zinc finger CCCH-type containing 12A IEA Ensembl GO_REF:0000107 NCBI chr 6:93,541,334...93,551,200
Ensembl chr 6:93,541,334...93,551,195
JBrowse link
negative regulation by host of viral glycoprotein metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APCS amyloid P component, serum IEA Ensembl GO_REF:0000107 NCBI chr 4:90,900,585...90,901,854
Ensembl chr 4:90,898,686...90,901,875
JBrowse link
G PTX3 pentraxin 3 IEA Ensembl GO_REF:0000107 NCBI chr13:97,273,594...97,279,570
Ensembl chr13:97,273,594...97,279,569
JBrowse link
negative regulation by host of viral process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APCS amyloid P component, serum IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:90,900,585...90,901,854
Ensembl chr 4:90,898,686...90,901,875
JBrowse link
G CEACAM1 CEA cell adhesion molecule 1 ISO (MGI:MGI:3848729|PMID:19358828)
(MGI:MGI:1098064|PMID:9343248)
(MGI:MGI:2148352|PMID:11483763)
MGI PMID:9343248, PMID:11483763, PMID:19358828 MGI:MGI:1098064, MGI:MGI:2148352, MGI:MGI:3848729 NCBI chr 6:49,437,308...49,460,614 JBrowse link
G CRP C-reactive protein, pentraxin-related IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:90,793,361...90,801,020
Ensembl chr 4:90,722,352...90,805,236
JBrowse link
G LTF lactotransferrin IEA Ensembl GO_REF:0000107 NCBI chr13:29,413,886...29,445,751
Ensembl chr13:29,413,886...29,445,737
JBrowse link
G PTX3 pentraxin 3 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:97,273,594...97,279,570
Ensembl chr13:97,273,594...97,279,569
JBrowse link
negative regulation by host of viral release from host cell term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G VAPB VAMP associated protein B and C ISO (PMID:19515777) AgBase PMID:19515777 NCBI chr17:58,594,749...58,644,925
Ensembl chr17:58,594,749...58,644,918
JBrowse link
negative regulation by host of viral transcription term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCL3L1 chemokine (C-C motif) ligand 3-like 1 ISS UniProt GO_REF:0000024 NCBI chr12:39,491,999...39,493,345
Ensembl chr12:39,491,885...39,493,370
JBrowse link
G CCL4 C-C motif chemokine ligand 4 ISO (PMID:10841574) UniProtKB PMID:10841574 NCBI chr12:39,479,190...39,480,511
Ensembl chr12:39,478,885...39,557,358
JBrowse link
G CCL5 C-C motif chemokine ligand 5 IEA Ensembl GO_REF:0000107 NCBI chr12:39,652,731...39,659,121
Ensembl chr12:39,648,598...39,659,118
JBrowse link
G HDAC1 histone deacetylase 1 IEA Ensembl GO_REF:0000107 NCBI chr 6:88,749,611...88,785,220
Ensembl chr 6:88,749,634...88,785,412
JBrowse link
G HMGA2 high mobility group AT-hook 2 ISO (PMID:17005673) UniProtKB PMID:17005673 NCBI chr 5:30,188,521...30,329,635 JBrowse link
G HMOX1 heme oxygenase 1 IMP (PMID:25086213) AgBase PMID:25086213
G INPP5K inositol polyphosphate-5-phosphatase K IEA Ensembl GO_REF:0000107 NCBI chr12:47,717,898...47,738,540
Ensembl chr12:47,717,907...47,738,477
JBrowse link
G JUN Jun proto-oncogene, AP-1 transcription factor subunit ISO (PMID:2833704) UniProtKB PMID:2833704 NCBI chr 6:153,686,425...153,687,635 JBrowse link
G LOC100621006 RE1-silencing transcription factor-like ISS UniProt GO_REF:0000024 NCBI chr 8:56,048,280...56,215,011
Ensembl chr 8:56,035,150...56,215,013
JBrowse link
G POU2F3 POU class 2 homeobox 3 IEA Ensembl GO_REF:0000107 NCBI chr 9:47,376,852...47,458,265
Ensembl chr 9:47,376,853...47,460,166
JBrowse link
G REST RE1 silencing transcription factor ISS UniProt GO_REF:0000024 NCBI chr 8:56,035,182...56,061,140
Ensembl chr 8:56,035,150...56,215,013
JBrowse link
G TARDBP TAR DNA binding protein IEA Ensembl GO_REF:0000107 NCBI chr 6:71,213,584...71,227,707
Ensembl chr 6:71,213,852...71,227,704
JBrowse link
G TFAP4 transcription factor AP-4 IEA Ensembl GO_REF:0000107 NCBI chr 3:38,043,735...38,060,820
Ensembl chr 3:38,048,128...38,060,819
JBrowse link
G ZNF639 zinc finger protein 639 IEA Ensembl GO_REF:0000107 NCBI chr13:117,370,496...117,384,046
Ensembl chr13:117,370,543...117,386,268
JBrowse link
negative regulation by virus of viral protein levels in host cell term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G STAT1 signal transducer and activator of transcription 1 IEA Ensembl GO_REF:0000107 NCBI chr15:95,593,201...95,646,324
Ensembl chr15:95,593,211...95,646,260
JBrowse link
G VAPB VAMP associated protein B and C ISO (PMID:19515777) AgBase PMID:19515777 NCBI chr17:58,594,749...58,644,925
Ensembl chr17:58,594,749...58,644,918
JBrowse link
negative regulation of intracellular transport of viral material term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BST2 bone marrow stromal cell antigen 2 ISO (MGI:MGI:5437405|PMID:22284121), (MGI:MGI:5448513|PMID:21919738)
(PMID:19036818), (PMID:20686043), (PMID:20943977)
(MGI:MGI:5437427|PMID:20686043)
UniProtKB PMID:19036818, PMID:20686043, PMID:20943977, PMID:21919738, PMID:22284121 MGI:MGI:5437405, MGI:MGI:5437427, MGI:MGI:5448513 NCBI chr 2:60,305,306...60,308,295
Ensembl chr 2:60,305,252...60,309,936
JBrowse link
G MX1 MX dynamin like GTPase 1 IMP (PMID:20167191) AgBase PMID:20167191 NCBI chr13:204,843,049...204,868,927
Ensembl chr13:204,843,754...204,868,922
JBrowse link
G TRIM15 tripartite motif containing 15 IEA Ensembl GO_REF:0000107 NCBI chr 7:22,730,372...22,742,941
Ensembl chr 7:22,730,644...22,746,668
JBrowse link
negative regulation of single stranded viral RNA replication via double stranded DNA intermediate term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AICDA activation induced cytidine deaminase IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:62,777,236...62,787,342
Ensembl chr 5:62,777,352...62,787,483
JBrowse link
G APOBEC3B apolipoprotein B mRNA editing enzyme catalytic subunit 3B ISO (PMID:18779051), (PMID:21835787) UniProtKB PMID:18779051, PMID:21835787 NCBI chr 5:9,098,676...9,115,965
Ensembl chr 5:9,097,719...9,116,369
JBrowse link
G HMGA2 high mobility group AT-hook 2 ISO (PMID:17005673) UniProtKB PMID:17005673 NCBI chr 5:30,188,521...30,329,635 JBrowse link
G INPP5K inositol polyphosphate-5-phosphatase K IEA Ensembl GO_REF:0000107 NCBI chr12:47,717,898...47,738,540
Ensembl chr12:47,717,907...47,738,477
JBrowse link
G MORC2 MORC family CW-type zinc finger 2 IEA Ensembl GO_REF:0000107 NCBI chr14:47,755,264...47,800,432
Ensembl chr14:47,754,282...47,799,643
JBrowse link
G MPHOSPH8 M-phase phosphoprotein 8 IEA Ensembl GO_REF:0000107 NCBI chr11:447,019...480,121
Ensembl chr11:447,052...480,121
JBrowse link
G RESF1 retroelement silencing factor 1 ISO (MGI:MGI:6271895|PMID:29728365) UniProt PMID:29728365 MGI:MGI:6271895 NCBI chr 5:42,263,560...42,299,596
Ensembl chr 5:42,261,290...42,299,514
JBrowse link
G SETDB1 SET domain bifurcated histone lysine methyltransferase 1 ISO (MGI:MGI:5440670|PMID:20164836), (MGI:MGI:6271895|PMID:29728365) UniProt PMID:20164836, PMID:29728365 MGI:MGI:5440670, MGI:MGI:6271895 NCBI chr 4:98,259,801...98,293,238
Ensembl chr 4:98,260,373...98,293,096
JBrowse link
G TASOR transcription activation suppressor IEA Ensembl GO_REF:0000107 NCBI chr13:38,491,048...38,557,256
Ensembl chr13:38,491,055...38,557,931
JBrowse link
G TRIM28 tripartite motif containing 28 IEA Ensembl GO_REF:0000107 NCBI chr 6:63,094,382...63,101,532
Ensembl chr 6:63,094,648...63,101,532
JBrowse link
G ZNF684 zinc finger protein 684 ISO (MGI:MGI:3842857|PMID:19270682) MGI PMID:19270682 MGI:MGI:3842857 NCBI chr 6:170,615,455...170,637,495
Ensembl chr 6:170,622,158...170,637,495
JBrowse link
negative regulation of transformation of host cell by virus term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FBLN1 fibulin 1 ISO (PMID:12200142) UniProtKB PMID:12200142 NCBI chr 5:3,839,498...3,927,178
Ensembl chr 5:3,839,501...3,927,183
JBrowse link
negative regulation of viral entry into host cell term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APCS amyloid P component, serum IEA Ensembl GO_REF:0000107 NCBI chr 4:90,900,585...90,901,854
Ensembl chr 4:90,898,686...90,901,875
JBrowse link
G FCN1 ficolin (collagen/fibrinogen domain containing) 1 ISO (PMID:22851708) UniProtKB PMID:22851708 NCBI chr 1:274,125,666...274,132,917 JBrowse link
G FCN2 ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin) ISO (PMID:22851708) UniProtKB PMID:22851708 NCBI chr 1:274,106,276...274,111,970
Ensembl chr 1:274,103,877...274,111,970
JBrowse link
G GSN gelsolin IEA Ensembl GO_REF:0000107 NCBI chr 1:261,295,711...261,372,848
Ensembl chr 1:261,295,713...261,385,287
JBrowse link
G IFITM1 interferon-induced transmembrane protein 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:124,095...125,495 JBrowse link
G IFITM3 interferon induced transmembrane protein 3 ISO (PMID:23358889)
(PMID:20943977), (PMID:21253575)
CACAO
UniProtKB
PMID:20943977, PMID:21253575, PMID:23358889 NCBI chr 2:128,658...129,736
Ensembl chr 2:127,152...129,835
JBrowse link
G LOC100626247 interferon-induced transmembrane protein 1-like IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:133,896...135,271 JBrowse link
G LOC102161418 interferon-induced transmembrane protein 1-like IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:156,364...157,650 JBrowse link
G LOC733579 tripartite motif protein TRIM5 ISO (PMID:18248090) UniProtKB PMID:18248090 NCBI chr 9:4,157,290...4,170,233
Ensembl chr 9:4,157,290...4,170,204
JBrowse link
G LY6E lymphocyte antigen 6 family member E ISO (PMID:32641482), (PMID:32704094)
(MGI:MGI:6448667|PMID:32704094)
UniProt PMID:32641482, PMID:32704094 MGI:MGI:6448667 NCBI chr 4:1,336,112...1,341,112 JBrowse link
G MID2 midline 2 IEA Ensembl GO_REF:0000107 NCBI chr  X:88,294,032...88,394,885
Ensembl chr  X:88,294,066...88,393,742
JBrowse link
G MRE11 MRE11 homolog, double strand break repair nuclease ISO RGD PMID:22850678 RGD:8693392 NCBI chr 9:26,572,352...26,634,596
Ensembl chr 9:26,572,360...26,634,568
JBrowse link
G NBN nibrin ISO RGD PMID:22850678 RGD:8693392 NCBI chr 4:46,787,664...46,854,331
Ensembl chr 4:46,787,659...46,903,999
JBrowse link
G PTX3 pentraxin 3 IEA Ensembl GO_REF:0000107 NCBI chr13:97,273,594...97,279,570
Ensembl chr13:97,273,594...97,279,569
JBrowse link
G RAD50 RAD50 double strand break repair protein ISO RGD PMID:22850678 RGD:8693392 NCBI chr 2:134,844,460...134,939,188 JBrowse link
G SNX3 sorting nexin 3 IEA Ensembl GO_REF:0000107 NCBI chr 1:74,306,450...74,349,735
Ensembl chr 1:74,306,453...74,349,335
JBrowse link
G TRIM10 tripartite motif containing 10 IEA Ensembl GO_REF:0000107 NCBI chr 7:22,718,000...22,731,445
Ensembl chr 7:22,715,025...22,732,141
JBrowse link
G TRIM11 tripartite motif containing 11 IEA Ensembl GO_REF:0000107 NCBI chr 2:51,729,333...51,743,256
Ensembl chr 2:51,733,180...51,743,256
JBrowse link
G TRIM25 tripartite motif containing 25 IEA Ensembl GO_REF:0000107 NCBI chr12:33,184,039...33,212,440
Ensembl chr12:33,184,044...33,212,398
JBrowse link
G TRIM26 tripartite motif containing 26 IEA Ensembl GO_REF:0000107 NCBI chr 7:22,757,794...22,767,662
Ensembl chr 7:22,756,345...22,780,174
JBrowse link
G TRIM31 tripartite motif containing 31 ISO (PMID:18248090)
(MGI:MGI:5545996|PMID:18248090)
UniProtKB PMID:18248090 MGI:MGI:5545996 NCBI chr 7:22,665,150...22,681,616 JBrowse link
G TRIM56 tripartite motif containing 56 ISO (MGI:MGI:5545996|PMID:18248090) UniProtKB PMID:18248090 MGI:MGI:5545996 NCBI chr 3:8,834,260...8,842,524
Ensembl chr 3:8,834,143...8,839,415
JBrowse link
G TRIM59 tripartite motif containing 59 IEA Ensembl GO_REF:0000107 NCBI chr13:100,118,824...100,133,117
Ensembl chr13:100,118,825...100,132,968
JBrowse link
G TRIM8 tripartite motif containing 8 IEA Ensembl GO_REF:0000107 NCBI chr14:113,637,437...113,652,577
Ensembl chr14:113,637,585...113,652,577
JBrowse link
negative regulation of viral genome replication term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAR adenosine deaminase RNA specific ISO (MGI:MGI:4939544|PMID:21173229) MGI PMID:21173229 MGI:MGI:4939544 NCBI chr 4:95,154,230...95,197,308
Ensembl chr 4:95,154,358...95,197,305
JBrowse link
G APOBEC3B apolipoprotein B mRNA editing enzyme catalytic subunit 3B ISO (MGI:MGI:5486557|PMID:16378963) UniProtKB PMID:16378963 MGI:MGI:5486557 NCBI chr 5:9,098,676...9,115,965
Ensembl chr 5:9,097,719...9,116,369
JBrowse link
G BANF1 BAF nuclear assembly factor 1 ISO (PMID:18005698) UniProtKB PMID:18005698 NCBI chr 2:6,333,451...6,335,326 JBrowse link
G BST2 bone marrow stromal cell antigen 2 ISO (PMID:20943977)
(MGI:MGI:5437405|PMID:22284121), (MGI:MGI:5448513|PMID:21919738)
UniProtKB PMID:20943977, PMID:21919738, PMID:22284121 MGI:MGI:5437405, MGI:MGI:5448513 NCBI chr 2:60,305,306...60,308,295
Ensembl chr 2:60,305,252...60,309,936
JBrowse link
G CCL5 C-C motif chemokine ligand 5 IEA Ensembl GO_REF:0000107 NCBI chr12:39,652,731...39,659,121
Ensembl chr12:39,648,598...39,659,118
JBrowse link
G EIF2AK2 eukaryotic translation initiation factor 2 alpha kinase 2 IEA Ensembl GO_REF:0000107 NCBI chr 3:103,041,029...103,096,741
Ensembl chr 3:103,041,224...103,096,738
JBrowse link
G FAM111A family with sequence similarity 111 member A IEA Ensembl GO_REF:0000107 NCBI chr 2:12,250,529...12,263,497
Ensembl chr 2:12,250,155...12,260,985
JBrowse link
G IFITM1 interferon-induced transmembrane protein 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:124,095...125,495 JBrowse link
G IFITM3 interferon induced transmembrane protein 3 ISO (PMID:20943977), (PMID:21253575) UniProtKB PMID:20943977, PMID:21253575 NCBI chr 2:128,658...129,736
Ensembl chr 2:127,152...129,835
JBrowse link
G IFNB1 interferon beta 1 IEA Ensembl GO_REF:0000107 NCBI chr 1:201,850,935...201,851,495
Ensembl chr 1:201,850,935...201,851,495
JBrowse link
G ILF3 interleukin enhancer binding factor 3 ISO (MGI:MGI:4867319|PMID:21123651) UniProtKB PMID:21123651 MGI:MGI:4867319 NCBI chr 2:69,413,875...69,443,216
Ensembl chr 2:69,413,870...69,443,216
JBrowse link
G ISG15 ISG15 ubiquitin like modifier IEA Ensembl GO_REF:0000107 NCBI chr 6:63,363,201...63,364,211
Ensembl chr 6:63,363,173...63,364,208
JBrowse link
G ISG20 interferon stimulated exonuclease gene 20 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:191,155,853...191,195,601
Ensembl chr 1:191,183,374...191,195,475
JBrowse link
G LOC100151816 interferon-induced protein with tetratricopeptide repeats 5 IEA Ensembl GO_REF:0000107 NCBI chr14:101,254,818...101,266,105
Ensembl chr14:101,254,768...101,267,654
JBrowse link
G LOC100622028 tripartite motif-containing protein 6 IEA Ensembl GO_REF:0000107 NCBI chr 9:4,197,922...4,204,688
Ensembl chr 9:4,197,922...4,204,664
JBrowse link
G LOC100626247 interferon-induced transmembrane protein 1-like IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:133,896...135,271 JBrowse link
G LOC102161418 interferon-induced transmembrane protein 1-like IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:156,364...157,650 JBrowse link
G LTF lactotransferrin IEA Ensembl GO_REF:0000107 NCBI chr13:29,413,886...29,445,751
Ensembl chr13:29,413,886...29,445,737
JBrowse link
G MAVS mitochondrial antiviral signaling protein IEA Ensembl GO_REF:0000107 NCBI chr17:31,850,646...31,869,273
Ensembl chr17:31,850,155...31,869,187
JBrowse link
G MX1 MX dynamin like GTPase 1 IMP (PMID:24500530) AgBase PMID:24500530 NCBI chr13:204,843,049...204,868,927
Ensembl chr13:204,843,754...204,868,922
JBrowse link
G OAS1 2'-5'-oligoadenylate synthetase 1 IDA
IEA
IBA
(PMID:20844035)
(PMID:21873635)
UniProt
Ensembl
GO_Central
PMID:20844035, PMID:21873635 GO_REF:0000107 NCBI chr14:38,851,083...38,867,427
Ensembl chr14:38,851,918...38,859,409
JBrowse link
G OAS2 2'-5'-oligoadenylate synthetase 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:38,827,667...38,847,697
Ensembl chr14:38,827,660...38,860,820
JBrowse link
G OASL 2'-5'-oligoadenylate synthetase like IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:40,900,050...40,917,189
Ensembl chr14:40,900,052...40,917,266
JBrowse link
G PARP10 poly(ADP-ribose) polymerase family member 10 ISO (PMID:22176891) UniProtKB PMID:22176891 NCBI chr 4:688,511...695,808 JBrowse link
G PLSCR1 phospholipid scramblase 1 IEA Ensembl GO_REF:0000107 NCBI chr13:86,836,288...86,869,569
Ensembl chr13:86,649,586...86,869,297
JBrowse link
G PROX1 prospero homeobox 1 IEA Ensembl GO_REF:0000107 NCBI chr 9:129,527,704...129,583,693
Ensembl chr 9:129,532,164...129,580,979
JBrowse link
G RNASEL ribonuclease L IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:123,895,045...123,910,386
Ensembl chr 9:123,893,306...123,910,432
JBrowse link
G RSAD2 radical S-adenosyl methionine domain containing 2 IEA Ensembl GO_REF:0000107 NCBI chr 3:128,880,853...128,897,809
Ensembl chr 3:128,877,186...128,897,847
JBrowse link
G SHFL shiftless antiviral inhibitor of ribosomal frameshifting IEA Ensembl GO_REF:0000107 NCBI chr 2:68,942,246...68,947,107
Ensembl chr 2:68,942,449...68,948,991
JBrowse link
G SLPI secretory leukocyte peptidase inhibitor IEA Ensembl GO_REF:0000107 NCBI chr17:47,595,804...47,598,364
Ensembl chr17:47,595,158...47,598,575
JBrowse link
G SRPK1 SRSF protein kinase 1 IEA Ensembl GO_REF:0000107 NCBI chr 7:31,645,753...31,701,305
Ensembl chr 7:31,645,755...31,701,405
JBrowse link
G SRPK2 SRSF protein kinase 2 IEA Ensembl GO_REF:0000107 NCBI chr 9:105,009,550...105,264,689
Ensembl chr 9:105,006,986...105,265,595
JBrowse link
G TNF tumor necrosis factor IEA Ensembl GO_REF:0000107 NCBI chr 7:23,699,635...23,702,393
Ensembl chr 7:23,699,636...23,703,655
JBrowse link
G ZC3HAV1 zinc finger CCCH-type containing, antiviral 1 IEA Ensembl GO_REF:0000107 NCBI chr18:10,529,805...10,588,913
Ensembl chr18:10,509,629...10,588,832
JBrowse link
negative regulation of viral life cycle term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HMOX1 heme oxygenase 1 IMP (PMID:25086213) AgBase PMID:25086213
G PPIA peptidylprolyl isomerase A ISO (PMID:19207730), (PMID:22347431) UniProt PMID:19207730, PMID:22347431 NCBI chr18:50,563,130...50,566,857 JBrowse link
negative regulation of viral release from host cell term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHMP3 charged multivesicular body protein 3 ISO (PMID:16740483) UniProtKB PMID:16740483 NCBI chr 3:58,206,921...58,279,252 JBrowse link
G LOC733579 tripartite motif protein TRIM5 ISO (PMID:18248090) UniProtKB PMID:18248090 NCBI chr 9:4,157,290...4,170,233
Ensembl chr 9:4,157,290...4,170,204
JBrowse link
G MID2 midline 2 IEA Ensembl GO_REF:0000107 NCBI chr  X:88,294,032...88,394,885
Ensembl chr  X:88,294,066...88,393,742
JBrowse link
G PML PML nuclear body scaffold IEA Ensembl GO_REF:0000107 NCBI chr 7:59,405,044...59,450,155
Ensembl chr 7:59,405,048...59,450,150
JBrowse link
G TRIM11 tripartite motif containing 11 IEA Ensembl GO_REF:0000107 NCBI chr 2:51,729,333...51,743,256
Ensembl chr 2:51,733,180...51,743,256
JBrowse link
G TRIM13 tripartite motif containing 13 IEA Ensembl GO_REF:0000107 NCBI chr11:17,785,031...17,850,005
Ensembl chr11:17,792,467...17,849,732
JBrowse link
G TRIM15 tripartite motif containing 15 IEA Ensembl GO_REF:0000107 NCBI chr 7:22,730,372...22,742,941
Ensembl chr 7:22,730,644...22,746,668
JBrowse link
G TRIM21 tripartite motif containing 21 IEA Ensembl GO_REF:0000107 NCBI chr 9:5,782,133...5,790,628
Ensembl chr 9:5,782,200...5,791,577
JBrowse link
G TRIM25 tripartite motif containing 25 IEA Ensembl GO_REF:0000107 NCBI chr12:33,184,039...33,212,440
Ensembl chr12:33,184,044...33,212,398
JBrowse link
G TRIM26 tripartite motif containing 26 IEA Ensembl GO_REF:0000107 NCBI chr 7:22,757,794...22,767,662
Ensembl chr 7:22,756,345...22,780,174
JBrowse link
G TRIM27 tripartite motif containing 27 IEA Ensembl GO_REF:0000107
G TRIM28 tripartite motif containing 28 IEA Ensembl GO_REF:0000107 NCBI chr 6:63,094,382...63,101,532
Ensembl chr 6:63,094,648...63,101,532
JBrowse link
G TRIM32 tripartite motif containing 32 IEA Ensembl GO_REF:0000107 NCBI chr 1:257,051,421...257,066,911
Ensembl chr 1:257,054,227...257,066,910
JBrowse link
G TRIM35 tripartite motif containing 35 IEA Ensembl GO_REF:0000107 NCBI chr14:11,031,667...11,051,903
Ensembl chr14:11,031,429...11,065,708
JBrowse link
G TRIM56 tripartite motif containing 56 ISO (MGI:MGI:5545996|PMID:18248090) UniProtKB PMID:18248090 MGI:MGI:5545996 NCBI chr 3:8,834,260...8,842,524
Ensembl chr 3:8,834,143...8,839,415
JBrowse link
G TRIM8 tripartite motif containing 8 IEA Ensembl GO_REF:0000107 NCBI chr14:113,637,437...113,652,577
Ensembl chr14:113,637,585...113,652,577
JBrowse link
negative regulation of viral transcription term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HEXIM1 HEXIM P-TEFb complex subunit 1 ISO (PMID:18249148) FlyBase PMID:18249148 NCBI chr12:18,267,023...18,270,089
Ensembl chr12:18,267,405...18,268,451
JBrowse link
G IFITM3 interferon induced transmembrane protein 3 ISO (PMID:20943977) UniProtKB PMID:20943977 NCBI chr 2:128,658...129,736
Ensembl chr 2:127,152...129,835
JBrowse link
G LARP7 La ribonucleoprotein 7, transcriptional regulator ISO (PMID:18249148), (PMID:18483487) FlyBase PMID:18249148, PMID:18483487 NCBI chr 8:110,069,565...110,089,789
Ensembl chr 8:110,069,829...110,089,708
JBrowse link
G LOC100517129 nuclear body protein SP140-like protein ISO (PMID:16873258) BHF-UCL PMID:16873258 NCBI chr15:131,299,923...131,381,253 JBrowse link
G MID2 midline 2 IEA Ensembl GO_REF:0000107 NCBI chr  X:88,294,032...88,394,885
Ensembl chr  X:88,294,066...88,393,742
JBrowse link
G TRIM11 tripartite motif containing 11 IEA Ensembl GO_REF:0000107 NCBI chr 2:51,729,333...51,743,256
Ensembl chr 2:51,733,180...51,743,256
JBrowse link
G TRIM13 tripartite motif containing 13 IEA Ensembl GO_REF:0000107 NCBI chr11:17,785,031...17,850,005
Ensembl chr11:17,792,467...17,849,732
JBrowse link
G TRIM14 tripartite motif containing 14 IEA Ensembl GO_REF:0000107 NCBI chr 1:239,912,126...239,945,082
Ensembl chr 1:239,913,474...239,944,934
JBrowse link
G TRIM21 tripartite motif containing 21 IEA Ensembl GO_REF:0000107 NCBI chr 9:5,782,133...5,790,628
Ensembl chr 9:5,782,200...5,791,577
JBrowse link
G TRIM27 tripartite motif containing 27 IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107
G TRIM31 tripartite motif containing 31 ISO (PMID:18248090) UniProtKB PMID:18248090 NCBI chr 7:22,665,150...22,681,616 JBrowse link
G TRIM32 tripartite motif containing 32 IEA Ensembl GO_REF:0000107 NCBI chr 1:257,051,421...257,066,911
Ensembl chr 1:257,054,227...257,066,910
JBrowse link
G TRIM62 tripartite motif containing 62 IEA Ensembl GO_REF:0000107 NCBI chr 6:89,406,470...89,442,794
Ensembl chr 6:89,406,478...89,442,746
JBrowse link
G TRIM8 tripartite motif containing 8 IEA Ensembl GO_REF:0000107 NCBI chr14:113,637,437...113,652,577
Ensembl chr14:113,637,585...113,652,577
JBrowse link
G UBP1 upstream binding protein 1 IEA Ensembl GO_REF:0000107 NCBI chr13:19,203,965...19,276,392
Ensembl chr13:19,204,947...19,276,969
JBrowse link
G ZFP36 ZFP36 ring finger protein ISO (PMID:14679154) UniProtKB PMID:14679154 NCBI chr 6:48,063,732...48,066,235
Ensembl chr 6:48,052,137...48,066,257
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16545
    negative regulation of biological process 5351
      negative regulation of viral process 109
        negative regulation by host of viral process + 17
        negative regulation by virus of viral protein levels in host cell 2
        negative regulation of transformation of host cell by virus 1
        negative regulation of viral genome replication + 54
        negative regulation of viral life cycle + 29
        negative regulation of viral release from host cell + 17
        negative regulation of viral transcription + 33
        negative regulation of viral translation 0
Path 2
Term Annotations click to browse term
  biological_process 16545
    biological regulation 12011
      regulation of biological process 11420
        regulation of symbiotic process 218
          regulation of viral process 203
            negative regulation of viral process 109
              negative regulation by host of viral process + 17
              negative regulation by virus of viral protein levels in host cell 2
              negative regulation of transformation of host cell by virus 1
              negative regulation of viral genome replication + 54
              negative regulation of viral life cycle + 29
              negative regulation of viral release from host cell + 17
              negative regulation of viral transcription + 33
              negative regulation of viral translation 0
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.