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ONTOLOGY REPORT - ANNOTATIONS


Term:embryonic camera-type eye morphogenesis
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Accession:GO:0048596 term browser browse the term
Definition:The process in which the anatomical structures of the eye are generated and organized during embryonic development.
Synonyms:broad_synonym: embryonic eye morphogenesis


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embryonic camera-type eye morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BMP7 bone morphogenetic protein 7 JBrowse link 20 57,168,753 57,266,641 RGD:2290271
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 JBrowse link 6 139,371,807 139,374,648 RGD:2290271
G FOXF2 forkhead box F2 JBrowse link 6 1,389,576 1,395,603 RGD:2290271
G FZD5 frizzled class receptor 5 JBrowse link 2 207,753,889 207,769,906 RGD:2290271
G HIPK1 homeodomain interacting protein kinase 1 JBrowse link 1 113,929,324 113,977,869 RGD:2290271
G HIPK2 homeodomain interacting protein kinase 2 JBrowse link 7 139,561,570 139,777,998 RGD:2290271
G IHH Indian hedgehog signaling molecule JBrowse link 2 219,054,424 219,060,921 RGD:2290271
G KDM2B lysine demethylase 2B JBrowse link 12 121,402,288 121,582,268 RGD:2290271
G LRP6 LDL receptor related protein 6 JBrowse link 12 12,116,025 12,267,044 RGD:2290271
G PAX6 paired box 6 JBrowse link 11 31,784,792 31,817,961 RGD:2290271
G SP3 Sp3 transcription factor JBrowse link 2 173,900,775 173,965,702 RGD:2290271
G TBX2 T-box transcription factor 2 JBrowse link 17 61,399,843 61,409,466 RGD:2290271
G TH tyrosine hydroxylase JBrowse link 11 2,163,929 2,174,081 RGD:2290271
G ZEB1 zinc finger E-box binding homeobox 1 JBrowse link 10 31,318,417 31,529,814 RGD:2290271
closure of optic fissure term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G PHACTR4 phosphatase and actin regulator 4 JBrowse link 1 28,369,740 28,500,364 RGD:2290271
G SOX11 SRY-box transcription factor 11 JBrowse link 2 5,692,384 5,701,385 RGD:2290271
embryonic camera-type eye formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G STRA6 stimulated by retinoic acid 6 JBrowse link 15 74,179,466 74,212,267 RGD:2290271
G TWIST1 twist family bHLH transcription factor 1 JBrowse link 7 19,113,047 19,117,636 RGD:2290271
optic cup formation involved in camera-type eye development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ARID1A AT-rich interaction domain 1A JBrowse link 1 26,696,015 26,782,104 RGD:2290271
G WNT16 Wnt family member 16 JBrowse link 7 121,325,367 121,341,104 RGD:2290271
G WNT5A Wnt family member 5A JBrowse link 3 55,465,715 55,505,261 RGD:2290271
optic cup morphogenesis involved in camera-type eye development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ALDH1A3 aldehyde dehydrogenase 1 family member A3 JBrowse link 15 100,879,831 100,916,626 RGD:2290271
G PAX2 paired box 2 JBrowse link 10 100,735,396 100,829,944 RGD:2290271
optic cup structural organization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G TFAP2A transcription factor AP-2 alpha JBrowse link 6 10,396,677 10,420,060 RGD:2290271
optic placode formation involved in camera-type eye formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G FRS2 fibroblast growth factor receptor substrate 2 JBrowse link 12 69,470,371 69,579,793 RGD:2290271
G PROX1 prospero homeobox 1 JBrowse link 1 213,983,239 214,041,510 RGD:2290271
optic vesicle morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G SIX3 SIX homeobox 3 JBrowse link 2 44,941,702 44,946,071 RGD:2290271
G TFAP2A transcription factor AP-2 alpha JBrowse link 6 10,396,677 10,420,060 RGD:2290271

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17685
    developmental process 6444
      anatomical structure morphogenesis 2666
        embryonic morphogenesis 593
          embryonic organ morphogenesis 297
            embryonic eye morphogenesis 35
              embryonic camera-type eye morphogenesis 27
                embryonic camera-type eye formation + 12
                optic vesicle morphogenesis + 2
Path 2
Term Annotations click to browse term
  biological_process 17685
    developmental process 6444
      anatomical structure development 5932
        multicellular organism development 5434
          system development 4867
            animal organ development 3613
              sensory organ development 559
                eye development 365
                  camera-type eye development 323
                    embryonic camera-type eye development 38
                      embryonic camera-type eye morphogenesis 27
                        embryonic camera-type eye formation + 12
                        optic vesicle morphogenesis + 2
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.