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ONTOLOGY REPORT - ANNOTATIONS


Term:oocyte development
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Accession:GO:0048599 term browser browse the term
Definition:The process whose specific outcome is the progression of an oocyte over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell.


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oocyte development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atm ATM serine/threonine kinase JBrowse link 8 58,015,938 58,119,973 RGD:1624291
RGD:1600115
G Aurkc aurora kinase C JBrowse link 1 69,958,452 69,964,546 RGD:1600115
G Bcl2 BCL2, apoptosis regulator JBrowse link 13 26,605,426 26,769,374 RGD:1624291
RGD:1600115
G Ctnnb1 catenin beta 1 JBrowse link 8 129,601,511 129,628,378 RGD:1624291
RGD:1600115
G Dmrt1 doublesex and mab-3 related transcription factor 1 JBrowse link 1 243,477,403 243,582,629 RGD:1624291
RGD:13792537
G Inhbb inhibin subunit beta B JBrowse link 13 35,436,532 35,442,222 RGD:1624291
RGD:1600115
G Meioc meiosis specific with coiled-coil domain JBrowse link 10 90,622,954 90,641,883 RGD:1624291
RGD:1600115
G Wnt4 Wnt family member 4 JBrowse link 5 155,649,238 155,668,065 RGD:1600115
RGD:1624291
G Ybx2 Y box binding protein 2 JBrowse link 10 56,546,689 56,552,339 RGD:2311249
G Ythdc2 YTH domain containing 2 JBrowse link 1 182,072,386 182,141,399 RGD:1600115
RGD:1624291
G Zfx zinc finger protein X-linked JBrowse link X 63,158,368 63,204,971 RGD:1624291
RGD:1600115
G Zglp1 zinc finger, GATA-like protein 1 JBrowse link 8 22,081,439 22,086,446 RGD:1624291
RGD:1600115
G Zp3 zona pellucida glycoprotein 3 JBrowse link 12 23,735,225 23,752,734 RGD:1600115
RGD:1624291
meiotic cell cycle process involved in oocyte maturation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cdk1 cyclin-dependent kinase 1 JBrowse link 20 20,576,341 20,591,510 RGD:1624291
G Kif20a kinesin family member 20A JBrowse link 18 27,424,328 27,432,814 RGD:1624291
negative regulation of meiotic cell cycle process involved in oocyte maturation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccnb1 cyclin B1 JBrowse link 2 30,782,133 30,791,106 RGD:1624291
G Ccnb2 cyclin B2 JBrowse link 8 76,847,972 76,861,165 RGD:1624291
G Fzr1 fizzy and cell division cycle 20 related 1 JBrowse link 7 11,201,690 11,213,614 RGD:1624291
G Gpr3 G protein-coupled receptor 3 JBrowse link 5 151,394,118 151,397,634 RGD:1624291
G Grb14 growth factor receptor bound protein 14 JBrowse link 3 50,937,403 51,054,447 RGD:12793049
G Prkaca protein kinase cAMP-activated catalytic subunit alpha JBrowse link 19 25,095,089 25,118,869 RGD:1624291
G Wee2 WEE1 homolog 2 JBrowse link 4 68,604,770 68,631,341 RGD:1624291
negative regulation of oocyte development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Igf1 insulin-like growth factor 1 JBrowse link 7 28,412,123 28,491,815 RGD:1624291
RGD:1600115
G Wee2 WEE1 homolog 2 JBrowse link 4 68,604,770 68,631,341 RGD:1624291
negative regulation of oocyte maturation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gpr3 G protein-coupled receptor 3 JBrowse link 5 151,394,118 151,397,634 RGD:1624291
G Nppc natriuretic peptide C JBrowse link 9 93,731,436 93,735,636 RGD:1624291
RGD:1600115
G Npr2 natriuretic peptide receptor 2 JBrowse link 5 59,128,186 59,147,321 RGD:1624291
RGD:1600115
G Shb SH2 domain containing adaptor protein B JBrowse link 5 60,970,650 61,077,881 RGD:1624291
RGD:1600115
G Wee2 WEE1 homolog 2 JBrowse link 4 68,604,770 68,631,341 RGD:1624291
RGD:1600115
oocyte growth term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Foxl2 forkhead box L2 JBrowse link 8 107,194,492 107,197,644 RGD:1600115
G Gdf9 growth differentiation factor 9 JBrowse link 10 38,782,519 38,793,238 RGD:1624291
RGD:1600115
G Kmt2d lysine methyltransferase 2D JBrowse link 7 140,507,137 140,542,479 RGD:1624291
oocyte maturation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Brca2 BRCA2, DNA repair associated JBrowse link 12 503,660 544,754 RGD:1624291
RGD:1600115
G Ccnb1 cyclin B1 JBrowse link 2 30,782,133 30,791,106 RGD:1578405
G Cdc25b cell division cycle 25B JBrowse link 3 123,731,539 123,741,696 RGD:1624291
RGD:1600115
G Dazl deleted in azoospermia-like JBrowse link 9 12,633,983 12,651,017 RGD:1624291
RGD:1600115
G Dmc1 DNA meiotic recombinase 1 JBrowse link 7 120,796,217 120,840,524 RGD:1624291
RGD:1600115
G Ereg epiregulin JBrowse link 14 18,577,620 18,591,395 RGD:2316284
G Fbxo5 F-box protein 5 JBrowse link 1 42,461,277 42,467,646 RGD:1624291
RGD:1600115
G Foxo3 forkhead box O3 JBrowse link 20 46,428,078 46,519,156 RGD:1624291
RGD:1600115
G Insl3 insulin-like 3 JBrowse link 16 20,120,753 20,122,702 RGD:1600181
G Pabpc1l poly(A) binding protein, cytoplasmic 1-like JBrowse link 3 160,410,733 160,447,073 RGD:1624291
RGD:1600115
G Pde3a phosphodiesterase 3A JBrowse link 4 175,431,904 175,703,844 RGD:731220
RGD:13792537
RGD:1624291
G Ptk2b protein tyrosine kinase 2 beta JBrowse link 15 42,827,306 42,947,796 RGD:1642612
G Rec8 REC8 meiotic recombination protein JBrowse link 15 34,296,922 34,304,387 RGD:1624291
RGD:1600115
G Rln1 relaxin 1 JBrowse link 1 247,483,298 247,486,331 RGD:1624291
G Rps6ka2 ribosomal protein S6 kinase A2 JBrowse link 1 53,219,346 53,499,445 RGD:1624291
RGD:1600115
G Rxfp2 relaxin family peptide receptor 2 JBrowse link 12 6,016,884 6,078,411 RGD:1600181
G Trip13 thyroid hormone receptor interactor 13 JBrowse link 1 31,967,980 32,012,923 RGD:1624291
RGD:1600115
G Tut4 terminal uridylyl transferase 4 JBrowse link 5 128,063,880 128,168,726 RGD:1600115
RGD:1624291
G Tut7 terminal uridylyl transferase 7 JBrowse link 17 5,225,854 5,279,674 RGD:1624291
G Washc1 WASH complex subunit 1 JBrowse link 9 113,918,914 113,936,861 RGD:1600115
RGD:1624291
G Washc5 WASH complex subunit 5 JBrowse link 7 99,625,379 99,677,237 RGD:1624291
RGD:1600115
G Ythdf2 YTH N(6)-methyladenosine RNA binding protein 2 JBrowse link 5 150,364,490 150,390,173 RGD:1624291
RGD:1600115
P granule organization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pld6 phospholipase D family, member 6 JBrowse link 10 46,142,313 46,145,774 RGD:1624291
RGD:1600115
G Tdrd5 tudor domain containing 5 JBrowse link 13 73,872,637 73,922,640 RGD:1600115
RGD:1624291
positive regulation of meiotic cell cycle process involved in oocyte maturation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aurka aurora kinase A JBrowse link 3 170,364,177 170,380,278 RGD:1624291
G Ccnh cyclin H JBrowse link 2 13,593,100 13,613,910 RGD:1624291
G Cdc20 cell division cycle 20 JBrowse link 5 137,260,728 137,264,931 RGD:1624291
G Cdk1 cyclin-dependent kinase 1 JBrowse link 20 20,576,341 20,591,510 RGD:1624291
G Cdk7 cyclin-dependent kinase 7 JBrowse link 2 30,710,642 30,735,522 RGD:1624291
G Prkar2a protein kinase cAMP-dependent type II regulatory subunit alpha JBrowse link 8 117,486,085 117,548,768 RGD:1624291
positive regulation of oocyte development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pde3a phosphodiesterase 3A JBrowse link 4 175,431,904 175,703,844 RGD:1624291
RGD:13792537
G Pde5a phosphodiesterase 5A JBrowse link 2 226,899,604 227,044,916 RGD:1624291
RGD:1600115
positive regulation of oocyte maturation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aurka aurora kinase A JBrowse link 3 170,364,177 170,380,278 RGD:1624291
RGD:1600115
G Gdf9 growth differentiation factor 9 JBrowse link 10 38,782,519 38,793,238 RGD:1624291
G Sirt2 sirtuin 2 JBrowse link 1 86,948,866 86,971,954 RGD:1600115
RGD:1624291
regulation of meiotic cell cycle process involved in oocyte maturation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Akap5 A-kinase anchoring protein 5 JBrowse link 6 99,356,509 99,361,909 RGD:1624291
G Ppp2r1a protein phosphatase 2 scaffold subunit A alpha JBrowse link 1 60,717,386 60,736,629 RGD:1624291
RGD:1600115
G Prkar1a protein kinase cAMP-dependent type I regulatory subunit alpha JBrowse link 10 97,940,705 97,959,199 RGD:1624291
G Prkar2a protein kinase cAMP-dependent type II regulatory subunit alpha JBrowse link 8 117,486,085 117,548,768 RGD:1624291
G Ythdf2 YTH N(6)-methyladenosine RNA binding protein 2 JBrowse link 5 150,364,490 150,390,173 RGD:1624291
RGD:1600115

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18008
    cellular process 16139
      cellular process involved in reproduction in multicellular organism 414
        germ cell development 310
          oocyte development 62
            negative regulation of oocyte development + 11
            oocyte construction + 2
            oocyte growth + 3
            oocyte maturation + 43
            oocyte morphogenesis 0
            positive regulation of oocyte development + 10
            regulation of oocyte development + 25
Path 2
Term Annotations click to browse term
  biological_process 18008
    reproduction 1673
      reproductive process 1670
        multi-organism reproductive process 1157
          sexual reproduction 908
            gamete generation 748
              female gamete generation 161
                oogenesis 99
                  oocyte differentiation 67
                    oocyte development 62
                      negative regulation of oocyte development + 11
                      oocyte construction + 2
                      oocyte growth + 3
                      oocyte maturation + 43
                      oocyte morphogenesis 0
                      positive regulation of oocyte development + 10
                      regulation of oocyte development + 25
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.