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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of muscle organ development
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Accession:GO:0048634 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of muscle development.


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regulation of muscle organ development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Neurog1 neurogenin 1 ISO (PMID:23419067) CAFA PMID:23419067 NCBI chrNW_004936597:2,708,001...2,709,702 JBrowse link
G Tifab TIFA inhibitor ISO (PMID:23419067) CAFA PMID:23419067 NCBI chrNW_004936597:2,620,661...2,621,302 JBrowse link
negative regulation of cardiac muscle tissue development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf3 fibroblast growth factor 3 ISO (PMID:20702560) BHF-UCL PMID:20702560 NCBI chrNW_004936599:868,634...875,464 JBrowse link
G Fgf8 fibroblast growth factor 8 ISO (PMID:20702560) BHF-UCL PMID:20702560 NCBI chrNW_004936600:4,004,847...4,010,626 JBrowse link
negative regulation of muscle organ development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sfmbt1 Scm like with four mbt domains 1 ISO (PMID:23349461) UniProtKB PMID:23349461 NCBI chrNW_004936473:3,650,096...3,784,191 JBrowse link
negative regulation of skeletal muscle tissue development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nras NRAS proto-oncogene, GTPase ISO (MGI:4839883|PMID:20534588) MGI PMID:20534588 MGI:4839883 NCBI chrNW_004936627:73,413...82,590 JBrowse link
G Tgfb1 transforming growth factor beta 1 ISO (PMID:9770491) UniProtKB PMID:9770491 NCBI chrNW_004936661:3,742,080...3,758,266 JBrowse link
G Tsc22d3 TSC22 domain family member 3 ISO (MGI:4838954|PMID:20124407) MGI PMID:20124407 MGI:4838954 NCBI chrNW_004936499:6,977,924...7,044,173 JBrowse link
G Twist1 twist family bHLH transcription factor 1 ISO (MGI:69156|PMID:7958419), (MGI:76047|PMID:7664846) MGI PMID:7664846, PMID:7958419 MGI:69156, MGI:76047 NCBI chrNW_004936546:5,331,220...5,332,669 JBrowse link
G Usp19 ubiquitin specific peptidase 19 ISO (MGI:5315325|PMID:21971047) UniProt PMID:21971047 MGI:5315325 NCBI chrNW_004936529:814,649...826,008 JBrowse link
G Usp2 ubiquitin specific peptidase 2 ISO PMID:10938131 UniProt PMID:10938131 RGD:634247 NCBI chrNW_004936542:4,284,243...4,310,545 JBrowse link
negative regulation of striated muscle tissue development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bdnf brain derived neurotrophic factor ISO RGD PMID:16723531 RGD:1580249 NCBI chrNW_004936540:5,530,081...5,582,765 JBrowse link
G Bmp4 bone morphogenetic protein 4 ISO (PMID:14749725) MGI PMID:14749725 NCBI chrNW_004936697:1,054,237...1,061,468 JBrowse link
G Lef1 lymphoid enhancer binding factor 1 ISO (MGI:3656361|PMID:16936075) MGI PMID:16936075 MGI:3656361 NCBI chrNW_004936818:453,635...569,194 JBrowse link
G Luc7l LUC7 like ISO (MGI:3055693|PMID:15474286) MGI PMID:15474286 MGI:3055693 NCBI chrNW_004936501:687,352...722,720 JBrowse link
G Sirt2 sirtuin 2 ISO (PMID:12887892) UniProtKB PMID:12887892 NCBI chrNW_004936661:1,828,868...1,849,892 JBrowse link
G Sox15 SRY-box transcription factor 15 ISO (MGI:1858709|PMID:10821863) MGI PMID:10821863 MGI:1858709 NCBI chrNW_004936595:865,878...868,241 JBrowse link
G Twist1 twist family bHLH transcription factor 1 ISO (MGI:1201268|PMID:9520323) UniProt PMID:9520323 MGI:1201268 NCBI chrNW_004936546:5,331,220...5,332,669 JBrowse link
negative regulation of ureter smooth muscle cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog signaling molecule ISO (MGI:2388350|PMID:12399320) UniProt PMID:12399320 MGI:2388350 NCBI chrNW_004936527:10,033,095...10,042,713 JBrowse link
positive regulation of cardiac muscle tissue development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Creb1 cAMP responsive element binding protein 1 ISO (MGI:5571433|PMID:24364879) MGI PMID:24364879 MGI:5571433 NCBI chrNW_004936631:3,721,307...3,785,346 JBrowse link
G Erbb3 erb-b2 receptor tyrosine kinase 3 ISO (MGI:5571433|PMID:24364879) MGI PMID:24364879 MGI:5571433 NCBI chrNW_004936646:497,783...515,247 JBrowse link
positive regulation of skeletal muscle fiber development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn3 actinin alpha 3 ISO (MGI:3778600|PMID:18178581) UniProt PMID:18178581 MGI:3778600 NCBI chrNW_004936599:3,033,854...3,046,364 JBrowse link
G Bcl2 BCL2 apoptosis regulator ISO (MGI:1928555|PMID:11146504) MGI PMID:11146504 MGI:1928555 NCBI chrNW_004936497:2,209,136...2,373,580 JBrowse link
G Lmod3 leiomodin 3 ISO (PMID:25250574) UniProtKB PMID:25250574 NCBI chrNW_004936603:1,510,330...1,520,741 JBrowse link
G Myog myogenin ISO (MGI:62381|PMID:8393145) UniProt PMID:8393145 MGI:62381 NCBI chrNW_004936567:1,507,042...1,509,814 JBrowse link
G Shox2 short stature homeobox 2 ISO (MGI:4946446|PMID:21156168) BHF-UCL PMID:21156168 MGI:4946446 NCBI chrNW_004936519:4,810,777...4,818,733 JBrowse link
positive regulation of skeletal muscle tissue development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdon cell adhesion associated, oncogene regulated ISO (MGI:3522534|PMID:15572127) MGI PMID:15572127 MGI:3522534 NCBI chrNW_004936572:6,176,267...6,268,885 JBrowse link
G Ctnnb1 catenin beta 1 ISO (MGI:5619733|PMID:23460868) CACAO PMID:23460868 MGI:5619733 NCBI chrNW_004936473:29,999,542...30,034,610 JBrowse link
G Flot1 flotillin 1 ISO (PMID:24046456)
(MGI:5634880|PMID:24046456)
UniProtKB
UniProt
PMID:24046456 MGI:5634880 NCBI chrNW_004936837:387,012...401,076 JBrowse link
G Hmgcr 3-hydroxy-3-methylglutaryl-CoA reductase ISO RGD PMID:19388010 RGD:2317940 NCBI chrNW_004936549:1,378,536...1,400,501 JBrowse link
G Mef2c myocyte enhancer factor 2C ISO (PMID:9770491) UniProtKB PMID:9770491 NCBI chrNW_004936469:7,060,480...7,225,497 JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 ISO (MGI:5569711|PMID:23926128) MGI PMID:23926128 MGI:5569711 NCBI chrNW_004936518:1,817,051...1,843,376 JBrowse link
G Shh sonic hedgehog signaling molecule ISO (MGI:1929969|PMID:11171399) MGI PMID:11171399 MGI:1929969 NCBI chrNW_004936527:10,033,095...10,042,713 JBrowse link
G Usp2 ubiquitin specific peptidase 2 ISO PMID:10938131 UniProt PMID:10938131 RGD:634247 NCBI chrNW_004936542:4,284,243...4,310,545 JBrowse link
G Wnt3a Wnt family member 3A ISO (MGI:2179189|PMID:11856745) CACAO PMID:11856745 MGI:2179189 NCBI chrNW_004936864:150,742...179,205 JBrowse link
positive regulation of skeletal muscle tissue growth term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn3 actinin alpha 3 ISO (MGI:3778600|PMID:18178581), (MGI:5554485|PMID:24234654) UniProt PMID:18178581, PMID:24234654 MGI:3778600, MGI:5554485 NCBI chrNW_004936599:3,033,854...3,046,364 JBrowse link
G Adrb2 adrenoceptor beta 2 ISO RGD PMID:16177600 RGD:1598747 NCBI chrNW_004936504:5,985,407...5,987,453 JBrowse link
G Dll1 delta like canonical Notch ligand 1 ISO (MGI:5608606|PMID:25220152) UniProt PMID:25220152 MGI:5608606 NCBI chrNW_004937098:212,704...220,589 JBrowse link
G Igf2 insulin like growth factor 2 ISO (MGI:6120647|PMID:29440408) UniProt PMID:29440408 MGI:6120647 NCBI chrNW_004936816:972,902...981,232 JBrowse link
G Mtm1 myotubularin 1 ISO (MGI:5510937|PMID:23695157) MGI PMID:23695157 MGI:5510937 NCBI chrNW_004936714:1,792,893...1,870,338 JBrowse link
G Naca nascent polypeptide associated complex subunit alpha ISO (MGI:4867362|PMID:21071677) BHF-UCL PMID:21071677 MGI:4867362 NCBI chrNW_004936646:1,017,491...1,030,130 JBrowse link
G Rps6kb1 ribosomal protein S6 kinase B1 ISO RGD PMID:16408196 RGD:1643018 NCBI chrNW_004936490:3,441,046...3,492,917 JBrowse link
positive regulation of striated muscle tissue development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mrtfb myocardin related transcription factor B ISO (PMID:14565952) UniProtKB PMID:14565952 NCBI chrNW_004936501:2,414,696...2,571,627 JBrowse link
positive regulation of ureter smooth muscle cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog signaling molecule ISO (MGI:2388350|PMID:12399320) UniProt PMID:12399320 MGI:2388350 NCBI chrNW_004936527:10,033,095...10,042,713 JBrowse link
regulation of skeletal muscle tissue development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor type 1 ISO PMID:12968668 UniProt PMID:12968668 RGD:8554636 NCBI chrNW_004936469:20,743,195...20,811,567 JBrowse link
G Megf10 multiple EGF like domains 10 ISO (PMID:22101682) UniProtKB PMID:22101682 NCBI chrNW_004936504:634,167...753,438 JBrowse link
G Tcf7l2 transcription factor 7 like 2 ISO (MGI:4879035|PMID:21177349) MGI PMID:21177349 MGI:4879035 NCBI chrNW_004936486:3,473,877...3,660,565 JBrowse link
G Wnt10b Wnt family member 10B ISO (MGI:3581945|PMID:15673614) MGI PMID:15673614 MGI:3581945 NCBI chrNW_004936512:6,768,240...6,774,172 JBrowse link
regulation of striated muscle tissue development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cenpf centromere protein F ISO (MGI:1339480|PMID:10373470) MGI PMID:10373470 MGI:1339480 NCBI chrNW_004936628:3,642,281...3,695,262 JBrowse link
G Lox lysyl oxidase ISO (MGI:5634219|PMID:25715398) MGI PMID:25715398 MGI:5634219 NCBI chrNW_004936575:2,526,067...2,533,996 JBrowse link
G Smad3 SMAD family member 3 ISO (MGI:2153314|PMID:11711431) MGI PMID:11711431 MGI:2153314 NCBI chrNW_004936471:27,080,662...27,185,861 JBrowse link
G Tgfb1 transforming growth factor beta 1 ISO (MGI:2153314|PMID:11711431) MGI PMID:11711431 MGI:2153314 NCBI chrNW_004936661:3,742,080...3,758,266 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12003
    regulation of biological process 8340
      regulation of developmental process 2339
        regulation of muscle organ development 46
          negative regulation of muscle organ development + 15
          positive regulation of muscle organ development + 23
          regulation of somitomeric trunk muscle development + 0
          regulation of striated muscle tissue development + 43
          regulation of ureter smooth muscle cell differentiation + 1
Path 2
Term Annotations click to browse term
  biological_process 12003
    developmental process 5648
      anatomical structure development 5286
        multicellular organism development 4845
          system development 4567
            animal organ development 3514
              muscle organ development 308
                regulation of muscle organ development 46
                  negative regulation of muscle organ development + 15
                  positive regulation of muscle organ development + 23
                  regulation of somitomeric trunk muscle development + 0
                  regulation of striated muscle tissue development + 43
                  regulation of ureter smooth muscle cell differentiation + 1
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.