Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:branching morphogenesis of an epithelial tube
go back to main search page
Accession:GO:0048754 term browser browse the term
Definition:The process in which the anatomical structures of branches in an epithelial tube are generated and organized. A tube is a long hollow cylinder.
Synonyms:related_synonym: tubulogenesis


show annotations for term's descendants           Sort by:
 
branching morphogenesis of an epithelial tube term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4GALT1 beta-1,4-galactosyltransferase 1 ISO (MGI:MGI:3052392|PMID:15282149)
(MGI:MGI:2178150|PMID:11900463)
MGI PMID:11900463, PMID:15282149 MGI:MGI:2178150, MGI:MGI:3052392 NCBI chr11:50,223,880...50,276,745
Ensembl chr11:50,226,242...50,276,730
JBrowse link
G BMP4 bone morphogenetic protein 4 ISO (PMID:10706139) UniProtKB PMID:10706139 NCBI chr 8:29,997,563...30,254,307
Ensembl chr 8:29,997,569...30,004,557
JBrowse link
G BMP7 bone morphogenetic protein 7 ISO (MGI:MGI:3575981|PMID:15831470) MGI PMID:15831470 MGI:MGI:3575981 NCBI chr24:42,203,183...42,294,105
Ensembl chr24:42,204,823...42,294,653
JBrowse link
G CASR calcium sensing receptor ISO positive regulation RGD PMID:20117086 RGD:7206840 NCBI chr33:25,340,822...25,432,814
Ensembl chr33:25,405,846...25,432,559
JBrowse link
G CLIC4 chloride intracellular channel 4 IEA Ensembl GO_REF:0000107 NCBI chr 2:74,903,653...74,974,103
Ensembl chr 2:74,906,948...74,974,032
JBrowse link
G DICER1 dicer 1, ribonuclease III ISO (MGI:MGI:3617296|PMID:16452165) MGI PMID:16452165 MGI:MGI:3617296 NCBI chr 8:63,970,245...64,029,438
Ensembl chr 8:63,972,027...64,019,879
JBrowse link
G EGF epidermal growth factor IEA Ensembl GO_REF:0000107 NCBI chr32:30,073,541...30,166,904
Ensembl chr32:30,073,950...30,166,295
JBrowse link
G FGF10 fibroblast growth factor 10 ISO (PMID:17959718) UniProtKB PMID:17959718 NCBI chr 4:65,851,130...65,930,944
Ensembl chr 4:65,851,069...65,928,192
JBrowse link
G GDF7 growth differentiation factor 7 ISO (MGI:MGI:1934988|PMID:11356025) MGI PMID:11356025 MGI:MGI:1934988 NCBI chr17:15,627,739...15,636,513 JBrowse link
G GLI2 GLI family zinc finger 2 IEA Ensembl GO_REF:0000107 NCBI chr19:29,128,401...29,383,324
Ensembl chr19:29,130,227...29,383,658
JBrowse link
G GLI3 GLI family zinc finger 3 ISO (MGI:MGI:3608164|PMID:16247775) MGI PMID:16247775 MGI:MGI:3608164 NCBI chr18:7,800,817...8,071,531
Ensembl chr18:7,801,394...8,068,132
JBrowse link
G HNF1B HNF1 homeobox B IEA Ensembl GO_REF:0000107 NCBI chr 9:37,437,992...37,493,200
Ensembl chr 9:37,438,583...37,492,993
JBrowse link
G IGF1 insulin like growth factor 1 ISO (MGI:MGI:3616136|PMID:15059953) MGI PMID:15059953 MGI:MGI:3616136 NCBI chr15:41,203,320...41,275,964
Ensembl chr15:41,202,518...41,275,794
JBrowse link
G KDR kinase insert domain receptor ISO (MGI:MGI:3613102|PMID:16375885) MGI PMID:16375885 MGI:MGI:3613102 NCBI chr13:47,442,861...47,484,574
Ensembl chr13:47,442,764...47,485,042
JBrowse link
G LAMA5 laminin subunit alpha 5 ISO (MGI:MGI:2678847|PMID:14568553) MGI PMID:14568553 MGI:MGI:2678847 NCBI chr24:46,315,008...46,351,279 JBrowse link
G MET MET proto-oncogene, receptor tyrosine kinase IEA Ensembl GO_REF:0000107 NCBI chr14:55,599,047...55,711,626
Ensembl chr14:55,598,337...55,724,027
JBrowse link
G MGP matrix Gla protein ISO fetal lung RGD PMID:15136295 RGD:1582506 NCBI chr27:31,735,301...31,738,673
Ensembl chr27:31,734,660...31,738,673
JBrowse link
G MKS1 MKS transition zone complex subunit 1 IEA Ensembl GO_REF:0000107 NCBI chr 9:32,865,972...32,878,712
Ensembl chr 9:32,860,995...32,879,338
JBrowse link
G MMP14 matrix metallopeptidase 14 IEA Ensembl GO_REF:0000107 NCBI chr 8:3,183,419...3,193,079
Ensembl chr 8:3,183,606...3,194,122
JBrowse link
G MYCN MYCN proto-oncogene, bHLH transcription factor ISO (MGI:MGI:3574742|PMID:15716345) MGI PMID:15716345 MGI:MGI:3574742 NCBI chr17:11,720,857...11,724,308 JBrowse link
G NKX3-1 NK3 homeobox 1 ISS UniProt GO_REF:0000024 NCBI chr25:33,815,343...33,817,465
Ensembl chr25:33,815,095...33,817,474
JBrowse link
G NOTCH1 notch receptor 1 IEA Ensembl GO_REF:0000107 NCBI chr 9:48,975,972...49,018,985
Ensembl chr 9:48,974,757...49,017,277
JBrowse link
G PAK1 p21 (RAC1) activated kinase 1 ISS
IEA
UniProt
Ensembl
GO_REF:0000024, GO_REF:0000107 NCBI chr21:21,341,530...21,409,535
Ensembl chr21:21,265,484...21,408,416
JBrowse link
G PKD1 polycystin 1, transient receptor potential channel interacting ISO (PMID:12482949)
(MGI:MGI:5603942|PMID:24939912)
UniProtKB PMID:12482949, PMID:24939912 MGI:MGI:5603942 NCBI chr 6:38,811,051...38,865,503
Ensembl chr 6:38,837,964...38,865,503
JBrowse link
G PPP1CA protein phosphatase 1 catalytic subunit alpha IEA Ensembl GO_REF:0000107 NCBI chr18:50,062,352...50,065,166
Ensembl chr18:50,062,352...50,065,166
JBrowse link
G PXN paxillin ISO (MGI:MGI:2680875|PMID:14636584) MGI PMID:14636584 MGI:MGI:2680875 NCBI chr26:16,157,231...16,224,028
Ensembl chr26:16,159,025...16,184,820
JBrowse link
G RASIP1 Ras interacting protein 1 IEA Ensembl GO_REF:0000107 NCBI chr 1:107,583,169...107,597,683
Ensembl chr 1:107,581,424...107,597,682
JBrowse link
G SEMA5A semaphorin 5A ISO (MGI:MGI:3575993|PMID:15743826) MGI PMID:15743826 MGI:MGI:3575993 NCBI chr34:4,612,202...5,089,071
Ensembl chr34:4,612,142...5,082,280
JBrowse link
G SHH sonic hedgehog signaling molecule ISO (MGI:MGI:3039063|PMID:15042696)
(MGI:MGI:3050270|PMID:15305287)
(MGI:MGI:1289788|PMID:9768363)
MGI PMID:9768363, PMID:15042696, PMID:15305287 MGI:MGI:1289788, MGI:MGI:3039063, MGI:MGI:3050270 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903
JBrowse link
G SLIT2 slit guidance ligand 2 IEA Ensembl GO_REF:0000107 NCBI chr 3:88,964,707...89,311,817
Ensembl chr 3:88,966,232...89,312,955
JBrowse link
G SPRY2 sprouty RTK signaling antagonist 2 ISO (MGI:MGI:1331548|PMID:10074434) MGI PMID:10074434 MGI:MGI:1331548 NCBI chr22:33,366,139...33,371,102
Ensembl chr22:33,366,931...33,367,878
JBrowse link
G TIMELESS timeless circadian regulator IEA Ensembl GO_REF:0000107 NCBI chr10:671,829...701,152
Ensembl chr10:671,269...687,016
JBrowse link
G TMEM67 transmembrane protein 67 ISO (MGI:MGI:4441259|PMID:17185389) UniProtKB PMID:17185389 MGI:MGI:4441259 NCBI chr29:38,655,531...38,715,774
Ensembl chr29:38,654,733...38,720,559
JBrowse link
G VEGFA vascular endothelial growth factor A ISO (MGI:MGI:3613102|PMID:16375885) MGI PMID:16375885 MGI:MGI:3613102 NCBI chr12:12,209,032...12,224,978
Ensembl chr12:12,208,231...12,224,965
JBrowse link
G WNT4 Wnt family member 4 ISO (MGI:MGI:2178881|PMID:11948913) MGI PMID:11948913 MGI:MGI:2178881 NCBI chr 2:77,112,045...77,129,702
Ensembl chr 2:77,101,300...77,127,111
JBrowse link
G WNT9B Wnt family member 9B ISO (MGI:MGI:3588895|PMID:16054034) MGI PMID:16054034 MGI:MGI:3588895 NCBI chr 9:10,157,607...10,172,664
Ensembl chr 9:10,149,842...10,172,654
JBrowse link
branch elongation involved in mammary gland duct branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B9D2 B9 domain containing 2 ISO (MGI:MGI:3814777|PMID:18614704) MGI PMID:18614704 MGI:MGI:3814777 NCBI chr 1:112,621,832...112,627,726
Ensembl chr 1:112,621,633...112,643,885
JBrowse link
G TGFB1 transforming growth factor beta 1 IEA Ensembl GO_REF:0000107 NCBI chr 1:112,629,476...112,643,885
Ensembl chr 1:112,621,633...112,643,885
JBrowse link
branch elongation involved in ureteric bud branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGF1 fibroblast growth factor 1 IEA
ISS
Ensembl
UniProtKB
GO_REF:0000024, GO_REF:0000107 NCBI chr 2:37,467,431...37,554,770
Ensembl chr 2:37,470,985...37,554,619
JBrowse link
branching involved in blood vessel morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACVR1 activin A receptor type 1 IEA Ensembl GO_REF:0000107 NCBI chr36:3,743,257...3,818,659
Ensembl chr36:3,744,163...3,818,652
JBrowse link
G AHR aryl hydrocarbon receptor ISO (MGI:MGI:1889403|PMID:10973493) DFLAT PMID:10973493 MGI:MGI:1889403 NCBI chr14:31,743,704...31,793,484
Ensembl chr14:31,686,170...31,791,444
JBrowse link
G COL4A1 collagen type IV alpha 1 chain IEA Ensembl GO_REF:0000107 NCBI chr22:58,511,210...58,651,949
Ensembl chr22:58,512,212...58,588,666
JBrowse link
G CTNNB1 catenin beta 1 IEA Ensembl GO_REF:0000107 NCBI chr23:10,559,722...10,572,933
Ensembl chr23:10,559,718...10,572,927
JBrowse link
G CXCL12 C-X-C motif chemokine ligand 12 ISO (MGI:MGI:3578491|PMID:15626744) MGI PMID:15626744 MGI:MGI:3578491 NCBI chr28:2,895,916...2,903,543 JBrowse link
G CXCR4 C-X-C motif chemokine receptor 4 ISO (MGI:MGI:3578491|PMID:15626744) MGI PMID:15626744 MGI:MGI:3578491 NCBI chr19:38,874,650...38,877,740
Ensembl chr19:38,874,145...38,877,740
JBrowse link
G DLL4 delta like canonical Notch ligand 4 IEA Ensembl GO_REF:0000107 NCBI chr30:8,059,463...8,068,742
Ensembl chr30:8,059,512...8,067,940
JBrowse link
G EDN1 endothelin 1 IEA Ensembl GO_REF:0000107 NCBI chr35:11,808,892...11,815,383
Ensembl chr35:11,808,892...11,815,383
JBrowse link
G EDNRA endothelin receptor type A IEA Ensembl GO_REF:0000107 NCBI chr15:45,823,472...45,878,527
Ensembl chr15:45,823,560...45,876,463
JBrowse link
G ENG endoglin IEA Ensembl GO_REF:0000107 NCBI chr 9:55,558,246...55,590,081
Ensembl chr 9:55,558,305...55,589,064
JBrowse link
G FGF8 fibroblast growth factor 8 IEA Ensembl GO_REF:0000107 NCBI chr28:14,362,407...14,367,109
Ensembl chr28:14,362,109...14,367,468
JBrowse link
G FLT1 fms related receptor tyrosine kinase 1 ISO (MGI:MGI:3045573|PMID:14982871) MGI PMID:14982871 MGI:MGI:3045573 NCBI chr25:11,231,958...11,410,379
Ensembl chr25:11,231,737...11,407,621
JBrowse link
G FOXC2 forkhead box C2 IEA Ensembl GO_REF:0000107 NCBI chr 5:66,234,336...66,296,007
Ensembl chr 5:66,294,176...66,295,693
JBrowse link
G GBX2 gastrulation brain homeobox 2 IEA Ensembl GO_REF:0000107 NCBI chr25:47,005,509...47,008,367
Ensembl chr25:47,005,504...47,008,512
JBrowse link
G GDF2 growth differentiation factor 2 IEA Ensembl GO_REF:0000107 NCBI chr 4:34,996,767...35,001,094
Ensembl chr 4:34,997,579...35,001,203
JBrowse link
G GNA13 G protein subunit alpha 13 IEA Ensembl GO_REF:0000107 NCBI chr 9:14,932,341...14,972,857
Ensembl chr 9:14,932,335...14,967,881
JBrowse link
G IHH Indian hedgehog signaling molecule ISO (MGI:MGI:3574706|PMID:15689378) MGI PMID:15689378 MGI:MGI:3574706 NCBI chr37:25,616,942...25,622,989 JBrowse link
G KDR kinase insert domain receptor IEA Ensembl GO_REF:0000107 NCBI chr13:47,442,861...47,484,574
Ensembl chr13:47,442,764...47,485,042
JBrowse link
G LEF1 lymphoid enhancer binding factor 1 IEA Ensembl GO_REF:0000107 NCBI chr32:28,516,002...28,633,759
Ensembl chr32:28,517,108...28,634,019
JBrowse link
G NFATC3 nuclear factor of activated T cells 3 ISO (MGI:MGI:2136698|PMID:11439183) MGI PMID:11439183 MGI:MGI:2136698 NCBI chr 5:81,294,656...81,434,256
Ensembl chr 5:81,296,214...81,434,250
JBrowse link
G NFATC4 nuclear factor of activated T cells 4 IEA Ensembl GO_REF:0000107 NCBI chr 8:4,337,098...4,346,409
Ensembl chr 8:4,336,450...4,346,100
JBrowse link
G NOTCH4 notch receptor 4 ISO (MGI:MGI:1934537|PMID:11344305) UniProtKB PMID:11344305 MGI:MGI:1934537 NCBI chr12:1,585,249...1,608,721
Ensembl chr12:1,587,918...1,607,760
JBrowse link
G NRARP NOTCH regulated ankyrin repeat protein IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:48,394,568...48,396,849
Ensembl chr 9:48,394,754...48,395,098
JBrowse link
G NRP1 neuropilin 1 IEA Ensembl GO_REF:0000107 NCBI chr 2:3,416,062...3,553,929
Ensembl chr 2:3,413,821...3,552,483
JBrowse link
G PITX2 paired like homeodomain 2 ISO (MGI:MGI:2389284|PMID:12397115) MGI PMID:12397115 MGI:MGI:2389284 NCBI chr32:30,710,161...30,730,162
Ensembl chr32:30,710,685...30,730,273
JBrowse link
G PLXND1 plexin D1 IEA Ensembl GO_REF:0000107 NCBI chr20:5,554,814...5,610,417
Ensembl chr20:5,554,708...5,610,122
JBrowse link
G PPP3R1 protein phosphatase 3 regulatory subunit B, alpha IEA Ensembl GO_REF:0000107 NCBI chr10:67,242,552...67,308,469 JBrowse link
G RBM15 RNA binding motif protein 15 IEA Ensembl GO_REF:0000107 NCBI chr 6:41,645,765...41,653,621
Ensembl chr 6:41,645,769...41,653,799
JBrowse link
G SEMA3E semaphorin 3E IEA Ensembl GO_REF:0000107 NCBI chr18:22,881,135...22,982,549
Ensembl chr18:22,881,133...23,116,696
JBrowse link
G SEMA5A semaphorin 5A ISO (MGI:MGI:3575993|PMID:15743826) MGI PMID:15743826 MGI:MGI:3575993 NCBI chr34:4,612,202...5,089,071
Ensembl chr34:4,612,142...5,082,280
JBrowse link
G SFRP2 secreted frizzled related protein 2 IEA Ensembl GO_REF:0000107 NCBI chr15:51,541,197...51,548,765
Ensembl chr15:51,540,500...51,548,765
JBrowse link
G SHH sonic hedgehog signaling molecule IEA Ensembl GO_REF:0000107 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903
JBrowse link
G SRF serum response factor IEA Ensembl GO_REF:0000107 NCBI chr12:11,664,441...11,673,846
Ensembl chr12:11,664,527...11,671,533
JBrowse link
G STK4 serine/threonine kinase 4 IEA Ensembl GO_REF:0000107 NCBI chr24:32,375,630...32,463,848
Ensembl chr24:32,375,189...32,521,042
JBrowse link
G TBX20 T-box transcription factor 20 IEA Ensembl GO_REF:0000107 NCBI chr14:46,891,706...46,946,899
Ensembl chr14:46,896,228...46,947,507
JBrowse link
G TGFBR2 transforming growth factor beta receptor 2 IEA Ensembl GO_REF:0000107 NCBI chr23:13,886,869...13,946,480
Ensembl chr23:13,889,000...13,977,636
JBrowse link
G VEGFA vascular endothelial growth factor A ISO (PMID:23083510), (PMID:23688497)
(MGI:MGI:3710026|PMID:17428830)
BHF-UCL
MGI
PMID:17428830, PMID:23083510, PMID:23688497 MGI:MGI:3710026 NCBI chr12:12,209,032...12,224,978
Ensembl chr12:12,208,231...12,224,965
JBrowse link
branching involved in lymph vessel morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NFATC1 nuclear factor of activated T cells 1 ISO (MGI:MGI:3848105|PMID:19233265) MGI PMID:19233265 MGI:MGI:3848105 NCBI chr 1:1,027,021...1,121,362
Ensembl chr 1:1,028,695...1,121,588
JBrowse link
branching involved in mammary gland duct morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BTRC beta-transducin repeat containing E3 ubiquitin protein ligase IEA Ensembl GO_REF:0000107 NCBI chr28:13,988,408...14,173,223
Ensembl chr28:13,988,432...14,169,581
JBrowse link
G CSF1 colony stimulating factor 1 IEA Ensembl GO_REF:0000107 NCBI chr 6:42,028,454...42,047,028
Ensembl chr 6:42,034,149...42,049,371
JBrowse link
G DDR1 discoidin domain receptor tyrosine kinase 1 IEA Ensembl GO_REF:0000107 NCBI chr12:653,800...671,190
Ensembl chr12:653,807...670,543
JBrowse link
G EPHA2 EPH receptor A2 IEA Ensembl GO_REF:0000107 NCBI chr 2:81,534,130...81,561,722
Ensembl chr 2:81,534,125...81,561,725
JBrowse link
G ETV4 ETS variant transcription factor 4 ISO (MGI:MGI:2667785|PMID:12871699)
(MGI:MGI:3828920|PMID:18977342)
MGI PMID:12871699, PMID:18977342 MGI:MGI:2667785, MGI:MGI:3828920 NCBI chr 9:19,715,259...19,731,085
Ensembl chr 9:19,715,535...19,730,456
JBrowse link
G KDM5B lysine demethylase 5B IEA Ensembl GO_REF:0000107 NCBI chr 7:336,452...415,568
Ensembl chr 7:330,705...412,386
JBrowse link
G LRP5 LDL receptor related protein 5 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr18:49,439,494...49,555,375
Ensembl chr18:49,439,483...49,516,396
JBrowse link
G LRP6 LDL receptor related protein 6 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr27:34,003,334...34,166,334
Ensembl chr27:34,003,539...34,161,437
JBrowse link
G MSX2 msh homeobox 2 IEA Ensembl GO_REF:0000107 NCBI chr 4:38,002,724...38,007,407
Ensembl chr 4:38,002,428...38,007,407
JBrowse link
G PML PML nuclear body scaffold IEA Ensembl GO_REF:0000107 NCBI chr30:37,232,337...37,278,434
Ensembl chr30:37,232,306...37,277,741
JBrowse link
G SLC12A2 solute carrier family 12 member 2 ISO (MGI:MGI:2180693|PMID:8864124) MGI PMID:8864124 MGI:MGI:2180693 NCBI chr11:17,143,943...17,256,248
Ensembl chr11:17,143,943...17,253,695
JBrowse link
G SRC SRC proto-oncogene, non-receptor tyrosine kinase IEA Ensembl GO_REF:0000107 NCBI chr24:25,982,499...26,019,748
Ensembl chr24:25,999,048...26,018,077
JBrowse link
G TBX3 T-box transcription factor 3 IEA Ensembl GO_REF:0000107 NCBI chr26:11,694,885...11,709,594
Ensembl chr26:11,696,565...11,708,918
JBrowse link
branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAMTS16 ADAM metallopeptidase with thrombospondin type 1 motif 16 IEA Ensembl GO_REF:0000107 NCBI chr34:8,196,733...8,346,215
Ensembl chr34:8,196,716...8,346,309
JBrowse link
G AGT angiotensinogen NOT ISO (MGI:MGI:2655949|PMID:12657564)
(MGI:MGI:77583|PMID:8675666)
MGI PMID:8675666, PMID:12657564 MGI:MGI:2655949, MGI:MGI:77583 NCBI chr 4:8,681,192...8,694,059
Ensembl chr 4:8,683,798...8,693,880
JBrowse link
G BCL2 BCL2 apoptosis regulator IEA Ensembl GO_REF:0000107 NCBI chr 1:13,733,849...13,900,653
Ensembl chr 1:13,731,406...13,900,658
JBrowse link
G BMP2 bone morphogenetic protein 2 IEA Ensembl GO_REF:0000107 NCBI chr24:15,199,667...15,211,509
Ensembl chr24:15,200,291...15,212,217
JBrowse link
G BMP4 bone morphogenetic protein 4 IEA Ensembl GO_REF:0000107 NCBI chr 8:29,997,563...30,254,307
Ensembl chr 8:29,997,569...30,004,557
JBrowse link
G CD44 CD44 molecule ISO (MGI:MGI:2449954|PMID:10926769) MGI PMID:10926769 MGI:MGI:2449954 NCBI chr18:32,735,493...32,826,483
Ensembl chr18:32,737,907...32,827,107
JBrowse link
G CITED1 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1 NOT ISO PMID:15843474
(MGI:MGI:3717986|PMID:17615577)
UniProt
UniProtKB
PMID:15843474, PMID:17615577 MGI:MGI:3717986, RGD:8554075 NCBI chr  X:56,327,104...56,332,608
Ensembl chr  X:56,327,182...56,332,047
JBrowse link
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 NOT ISO (MGI:MGI:3717986|PMID:17615577) UniProtKB PMID:17615577 MGI:MGI:3717986 NCBI chr 1:31,522,911...31,525,342
Ensembl chr 1:31,523,799...31,524,995
JBrowse link
G CTNNB1 catenin beta 1 IEA Ensembl GO_REF:0000107 NCBI chr23:10,559,722...10,572,933
Ensembl chr23:10,559,718...10,572,927
JBrowse link
G DCHS1 dachsous cadherin-related 1 IEA Ensembl GO_REF:0000107 NCBI chr21:29,927,713...29,955,742
Ensembl chr21:29,928,176...29,948,713
JBrowse link
G DLG1 discs large MAGUK scaffold protein 1 IEA Ensembl GO_REF:0000107 NCBI chr33:30,016,323...30,253,180
Ensembl chr33:30,016,600...30,253,547
JBrowse link
G DSPP dentin sialophosphoprotein ISO (MGI:MGI:3686561|PMID:16937369) MGI PMID:16937369 MGI:MGI:3686561 NCBI chr32:11,017,440...11,022,780 JBrowse link
G EYA1 EYA transcriptional coactivator and phosphatase 1 IEA Ensembl GO_REF:0000107 NCBI chr29:20,176,306...20,595,131
Ensembl chr29:20,177,014...20,525,653
JBrowse link
G FAT4 FAT atypical cadherin 4 IEA Ensembl GO_REF:0000107 NCBI chr19:15,157,595...15,332,821
Ensembl chr19:15,158,922...15,332,045
JBrowse link
G FGF2 fibroblast growth factor 2 ISO (PMID:12631064) UniProtKB PMID:12631064 NCBI chr19:17,403,288...17,463,143
Ensembl chr19:16,994,661...17,463,151
JBrowse link
G FGF8 fibroblast growth factor 8 IEA Ensembl GO_REF:0000107 NCBI chr28:14,362,407...14,367,109
Ensembl chr28:14,362,109...14,367,468
JBrowse link
G GDNF glial cell derived neurotrophic factor IEA Ensembl GO_REF:0000107 NCBI chr 4:70,966,694...70,991,860
Ensembl chr 4:70,971,432...70,989,714
JBrowse link
G GLI3 GLI family zinc finger 3 IEA Ensembl GO_REF:0000107 NCBI chr18:7,800,817...8,071,531
Ensembl chr18:7,801,394...8,068,132
JBrowse link
G GPC3 glypican 3 IEA Ensembl GO_REF:0000107 NCBI chr  X:104,313,426...104,751,215
Ensembl chr  X:104,313,591...104,751,756
JBrowse link
G GREB1L GREB1 like retinoic acid receptor coactivator IEA Ensembl GO_REF:0000107 NCBI chr 7:66,489,124...66,758,207
Ensembl chr 7:66,503,999...66,639,013
JBrowse link
G GZF1 GDNF inducible zinc finger protein 1 IEA Ensembl GO_REF:0000107 NCBI chr24:260,139...268,861
Ensembl chr24:261,904...299,287
JBrowse link
G HOXA11 homeobox A11 IEA Ensembl GO_REF:0000107 NCBI chr14:40,355,907...40,360,120
Ensembl chr14:40,357,478...40,359,919
JBrowse link
G HOXD11 homeobox D11 ISO (MGI:MGI:2135652|PMID:11493536) MGI PMID:11493536 MGI:MGI:2135652 NCBI chr36:19,913,064...19,926,868
Ensembl chr36:19,914,431...19,916,766
JBrowse link
G ILK integrin linked kinase IEA Ensembl GO_REF:0000107 NCBI chr21:29,911,326...29,917,972
Ensembl chr21:29,911,364...29,917,974
JBrowse link
G LAMA5 laminin subunit alpha 5 ISO (MGI:MGI:2678847|PMID:14568553) MGI PMID:14568553 MGI:MGI:2678847 NCBI chr24:46,315,008...46,351,279 JBrowse link
G LHX1 LIM homeobox 1 IEA Ensembl GO_REF:0000107 NCBI chr 9:36,760,890...36,768,345
Ensembl chr 9:36,761,826...36,768,164
JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor ISO (MGI:MGI:3830398|PMID:19161241) UniProtKB PMID:19161241 MGI:MGI:3830398 NCBI chr13:25,200,772...25,205,309
Ensembl chr13:25,200,577...25,205,309
JBrowse link
G NPNT nephronectin IEA Ensembl GO_REF:0000107 NCBI chr32:26,706,147...26,781,792
Ensembl chr32:26,705,476...26,781,275
JBrowse link
G PAX2 paired box 2 IEA Ensembl GO_REF:0000107 NCBI chr28:13,442,894...13,519,853
Ensembl chr28:13,442,893...13,532,094
JBrowse link
G PAX8 paired box 8 IEA Ensembl GO_REF:0000107 NCBI chr17:37,307,130...37,331,729
Ensembl chr17:37,306,033...37,363,178
JBrowse link
G PBX1 PBX homeobox 1 IEA Ensembl GO_REF:0000107 NCBI chr38:18,378,997...18,703,694
Ensembl chr38:18,418,093...18,703,497
JBrowse link
G PGF placental growth factor ISO (MGI:MGI:2675756|PMID:13678594) MGI PMID:13678594 MGI:MGI:2675756 NCBI chr 8:48,059,554...48,110,534
Ensembl chr 8:48,059,552...48,075,170
JBrowse link
G PKD2 polycystin 2, transient receptor potential cation channel IEA Ensembl GO_REF:0000107 NCBI chr32:11,383,441...11,437,603
Ensembl chr32:11,383,424...11,435,438
JBrowse link
G PSPN persephin ISO (MGI:MGI:1196665|PMID:9491986) MGI PMID:9491986 MGI:MGI:1196665 NCBI chr20:53,780,895...53,783,876
Ensembl chr20:53,783,171...53,783,696
JBrowse link
G PTCH1 patched 1 IEA Ensembl GO_REF:0000107 NCBI chr 1:71,246,750...71,309,036
Ensembl chr 1:71,238,195...71,305,662
JBrowse link
G SALL1 spalt like transcription factor 1 ISO (MGI:MGI:2447943|PMID:12482961) UniProtKB PMID:12482961 MGI:MGI:2447943 NCBI chr 2:64,242,742...64,260,021
Ensembl chr 2:64,243,987...64,259,521
JBrowse link
G SHH sonic hedgehog signaling molecule IEA Ensembl GO_REF:0000107 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903
JBrowse link
G SIX1 SIX homeobox 1 IEA Ensembl GO_REF:0000107 NCBI chr 8:35,676,705...35,679,534
Ensembl chr 8:35,676,479...35,679,534
JBrowse link
G SMAD4 SMAD family member 4 IEA Ensembl GO_REF:0000107 NCBI chr 1:23,875,989...23,930,027
Ensembl chr 1:23,882,139...23,969,405
JBrowse link
G SOX9 SRY-box transcription factor 9 ISO (PMID:8787755) UniProtKB PMID:8787755 NCBI chr 9:8,275,049...8,278,172
Ensembl chr 9:8,275,049...8,278,172
JBrowse link
G TCF21 transcription factor 21 ISS UniProt GO_REF:0000024 NCBI chr 1:26,856,281...26,859,654
Ensembl chr 1:26,856,587...26,859,647
JBrowse link
G TIMELESS timeless circadian regulator ISO RGD PMID:10963667 RGD:2308864 NCBI chr10:671,829...701,152
Ensembl chr10:671,269...687,016
JBrowse link
G WNT1 Wnt family member 1 ISO (MGI:MGI:3588895|PMID:16054034) MGI PMID:16054034 MGI:MGI:3588895 NCBI chr27:5,588,151...5,592,254
Ensembl chr27:5,574,940...5,592,060
JBrowse link
G WNT4 Wnt family member 4 IEA Ensembl GO_REF:0000107 NCBI chr 2:77,112,045...77,129,702
Ensembl chr 2:77,101,300...77,127,111
JBrowse link
G WNT6 Wnt family member 6 IEA Ensembl GO_REF:0000107 NCBI chr37:25,452,875...25,457,437
Ensembl chr37:25,453,905...25,456,654
JBrowse link
G WNT9B Wnt family member 9B IEA Ensembl GO_REF:0000107 NCBI chr 9:10,157,607...10,172,664
Ensembl chr 9:10,149,842...10,172,654
JBrowse link
G WT1 WT1 transcription factor IEA Ensembl GO_REF:0000107 NCBI chr18:35,099,660...35,148,767
Ensembl chr18:35,103,934...35,148,000
JBrowse link
bud dilation involved in lung branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 IEA Ensembl GO_REF:0000107 NCBI chr 8:29,997,563...30,254,307
Ensembl chr 8:29,997,569...30,004,557
JBrowse link
bud elongation involved in lung branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 IEA Ensembl GO_REF:0000107 NCBI chr 8:29,997,563...30,254,307
Ensembl chr 8:29,997,569...30,004,557
JBrowse link
G FGF10 fibroblast growth factor 10 IEA Ensembl GO_REF:0000107 NCBI chr 4:65,851,130...65,930,944
Ensembl chr 4:65,851,069...65,928,192
JBrowse link
G FGFR2 fibroblast growth factor receptor 2 ISO (MGI:MGI:3688953|PMID:16989802) MGI PMID:16989802 MGI:MGI:3688953 NCBI chr28:31,303,882...31,411,015
Ensembl chr28:31,303,894...31,411,621
JBrowse link
G RDH10 retinol dehydrogenase 10 IEA Ensembl GO_REF:0000107 NCBI chr29:21,886,014...21,912,451
Ensembl chr29:21,885,012...21,911,303
JBrowse link
G SPRY1 sprouty RTK signaling antagonist 1 IEA Ensembl GO_REF:0000107 NCBI chr19:16,969,869...16,976,573
Ensembl chr19:16,970,904...16,972,089
JBrowse link
G SPRY2 sprouty RTK signaling antagonist 2 IEA Ensembl GO_REF:0000107 NCBI chr22:33,366,139...33,371,102
Ensembl chr22:33,366,931...33,367,878
JBrowse link
G YAP1 Yes1 associated transcriptional regulator IEA Ensembl GO_REF:0000107 NCBI chr 5:29,394,760...29,495,977
Ensembl chr 5:29,394,541...29,496,251
JBrowse link
bud outgrowth involved in lung branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGF10 fibroblast growth factor 10 IEA Ensembl GO_REF:0000107 NCBI chr 4:65,851,130...65,930,944
Ensembl chr 4:65,851,069...65,928,192
JBrowse link
G SHH sonic hedgehog signaling molecule IEA Ensembl GO_REF:0000107 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903
JBrowse link
G TMTC3 transmembrane O-mannosyltransferase targeting cadherins 3 ISO (MGI:MGI:5300435|PMID:21956870) MGI PMID:21956870 MGI:MGI:5300435 NCBI chr15:29,280,423...29,350,449
Ensembl chr15:29,298,078...29,350,553
JBrowse link
G TNC tenascin C ISO RGD PMID:16928692 RGD:4889612 NCBI chr11:69,077,532...69,169,673
Ensembl chr11:69,077,535...69,170,281
JBrowse link
dichotomous subdivision of terminal units involved in lung branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTSH cathepsin H ISS UniProt GO_REF:0000024 NCBI chr 3:58,103,284...58,113,958
Ensembl chr 3:58,103,291...58,113,718
JBrowse link
dichotomous subdivision of terminal units involved in mammary gland duct morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AREG amphiregulin IEA Ensembl GO_REF:0000107 NCBI chr13:62,925,761...62,936,753
Ensembl chr13:62,926,301...62,936,738
JBrowse link
G TFAP2C transcription factor AP-2 gamma ISO (MGI:MGI:4422106|PMID:20131354) MGI PMID:20131354 MGI:MGI:4422106 NCBI chr24:41,787,477...41,797,446
Ensembl chr24:41,783,490...41,796,509
JBrowse link
epithelial cell proliferation involved in mammary gland duct elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AREG amphiregulin IEA Ensembl GO_REF:0000107 NCBI chr13:62,925,761...62,936,753
Ensembl chr13:62,926,301...62,936,738
JBrowse link
G ESR1 estrogen receptor 1 IEA Ensembl GO_REF:0000107 NCBI chr 1:42,081,952...42,368,544
Ensembl chr 1:42,081,969...42,368,544
JBrowse link
G MED1 mediator complex subunit 1 IEA Ensembl GO_REF:0000107 NCBI chr 9:22,989,257...23,019,350
Ensembl chr 9:22,989,301...23,019,349
JBrowse link
G TFAP2C transcription factor AP-2 gamma ISO (MGI:MGI:4422106|PMID:20131354) MGI PMID:20131354 MGI:MGI:4422106 NCBI chr24:41,787,477...41,797,446
Ensembl chr24:41,783,490...41,796,509
JBrowse link
G WNT5A Wnt family member 5A IEA Ensembl GO_REF:0000107 NCBI chr20:34,756,430...34,790,937
Ensembl chr20:34,769,930...34,786,673
JBrowse link
epithelial tube branching involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 ISO (PMID:8674409) RGD
MGI
PMID:8674409, PMID:8769111 RGD:2306315 NCBI chr 8:29,997,563...30,254,307
Ensembl chr 8:29,997,569...30,004,557
JBrowse link
G CTNNB1 catenin beta 1 IEA Ensembl GO_REF:0000107 NCBI chr23:10,559,722...10,572,933
Ensembl chr23:10,559,718...10,572,927
JBrowse link
G CTSD cathepsin D NOT ISO (MGI:MGI:3722010|PMID:17500053) UniProtKB PMID:17500053 MGI:MGI:3722010 NCBI chr18:46,010,440...46,019,457
Ensembl chr18:46,010,440...46,019,457
JBrowse link
G CTSZ cathepsin Z IEA Ensembl GO_REF:0000107 NCBI chr24:43,743,291...43,750,154
Ensembl chr24:43,743,294...43,754,424
JBrowse link
G DAG1 dystroglycan 1 IEA Ensembl GO_REF:0000107 NCBI chr20:39,707,672...39,779,094
Ensembl chr20:39,708,053...39,778,550
JBrowse link
G DLG5 discs large MAGUK scaffold protein 5 IEA Ensembl GO_REF:0000107 NCBI chr 4:27,687,223...27,780,007
Ensembl chr 4:27,687,287...27,806,722
JBrowse link
G ESRP1 epithelial splicing regulatory protein 1 ISO (MGI:MGI:5699497|PMID:26371508) MGI PMID:26371508 MGI:MGI:5699497 NCBI chr29:39,322,516...39,388,363
Ensembl chr29:39,333,117...39,387,337
JBrowse link
G ESRP2 epithelial splicing regulatory protein 2 IEA Ensembl GO_REF:0000107 NCBI chr 5:81,287,330...81,297,533
Ensembl chr 5:81,287,425...81,295,353
JBrowse link
G EXT1 exostosin glycosyltransferase 1 ISO (MGI:MGI:5912649|PMID:28859094) MGI PMID:28859094 MGI:MGI:5912649 NCBI chr13:17,172,497...17,457,084
Ensembl chr13:17,172,705...17,456,469
JBrowse link
G FGF10 fibroblast growth factor 10 ISO (MGI:MGI:1101385|PMID:9428423), (MGI:MGI:3609523|PMID:16169547), (MGI:MGI:3613102|PMID:16375885)
(MGI:MGI:3578606|PMID:15800000)
(MGI:MGI:3716020|PMID:17560563)
(MGI:MGI:1309706|PMID:9784490)
(MGI:MGI:1327513|PMID:9916808)
MGI PMID:9428423, PMID:9784490, PMID:9916808, PMID:15800000, PMID:16169547, PMID:16375885, PMID:17560563 MGI:MGI:1101385, MGI:MGI:1309706, MGI:MGI:1327513, MGI:MGI:3578606, MGI:MGI:3609523, MGI:MGI:3613102, MGI:MGI:3716020 NCBI chr 4:65,851,130...65,930,944
Ensembl chr 4:65,851,069...65,928,192
JBrowse link
G FGFR2 fibroblast growth factor receptor 2 ISO (MGI:MGI:5523405|PMID:24058167) MGI PMID:24058167 MGI:MGI:5523405 NCBI chr28:31,303,882...31,411,015
Ensembl chr28:31,303,894...31,411,621
JBrowse link
G FOXA1 forkhead box A1 IEA Ensembl GO_REF:0000107 NCBI chr 8:16,072,629...16,083,105
Ensembl chr 8:16,079,140...16,083,807
JBrowse link
G FOXA2 forkhead box A2 ISO (MGI:MGI:3579763|PMID:15668254) MGI PMID:15668254 MGI:MGI:3579763 NCBI chr24:1,010,370...1,013,791
Ensembl chr24:1,010,651...1,013,072
JBrowse link
G FOXF1 forkhead box F1 IEA Ensembl GO_REF:0000107 NCBI chr 5:66,343,776...66,347,785
Ensembl chr 5:66,345,150...66,347,935
JBrowse link
G HHIP hedgehog interacting protein IEA Ensembl GO_REF:0000107 NCBI chr15:43,432,464...43,525,973
Ensembl chr15:43,431,650...43,520,861
JBrowse link
G HMGA2 high mobility group AT-hook 2 ISO (MGI:MGI:5638831|PMID:24661562) MGI PMID:24661562 MGI:MGI:5638831 NCBI chr10:8,348,101...8,491,435 JBrowse link
G HOXA5 homeobox A5 IEA Ensembl GO_REF:0000107 NCBI chr14:40,315,409...40,319,001
Ensembl chr14:40,315,639...40,317,768
JBrowse link
G KRAS KRAS proto-oncogene, GTPase IEA Ensembl GO_REF:0000107 NCBI chr27:22,261,753...22,296,704
Ensembl chr27:22,257,941...22,293,369
JBrowse link
G LAMA1 laminin subunit alpha 1 IEA Ensembl GO_REF:0000107 NCBI chr 7:73,309,383...73,438,543
Ensembl chr 7:73,309,388...73,448,151
JBrowse link
G NKX2-1 NK2 homeobox 1 IEA Ensembl GO_REF:0000107
G RSPO2 R-spondin 2 IEA Ensembl GO_REF:0000107 NCBI chr13:8,610,227...8,755,727
Ensembl chr13:8,611,952...8,754,859
JBrowse link
G SHH sonic hedgehog signaling molecule ISO (MGI:MGI:1277744|PMID:9731532), (MGI:MGI:1346236|PMID:10500184) RGD
MGI
PMID:8769111, PMID:9731532, PMID:10500184 MGI:MGI:1277744, MGI:MGI:1346236, RGD:2306315 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903
JBrowse link
G SOX2 SRY-box transcription factor 2 ISO (MGI:MGI:3795352|PMID:18374910) MGI PMID:18374910 MGI:MGI:3795352 NCBI chr34:14,853,000...14,855,153 JBrowse link
G SOX9 SRY-box transcription factor 9 ISO (MGI:MGI:5523405|PMID:24058167) MGI PMID:24058167 MGI:MGI:5523405 NCBI chr 9:8,275,049...8,278,172
Ensembl chr 9:8,275,049...8,278,172
JBrowse link
lateral sprouting involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CELSR1 cadherin EGF LAG seven-pass G-type receptor 1 IEA Ensembl GO_REF:0000107 NCBI chr10:19,704,104...19,836,886
Ensembl chr10:19,707,804...19,837,481
JBrowse link
lateral sprouting involved in mammary gland duct morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AR androgen receptor IEA Ensembl GO_REF:0000107 NCBI chr24:34,713,390...34,731,461
NCBI chr  X:51,969,785...52,167,450
Ensembl chr  X:51,969,785...52,151,912
JBrowse link
G WNT5A Wnt family member 5A IEA Ensembl GO_REF:0000107 NCBI chr20:34,756,430...34,790,937
Ensembl chr20:34,769,930...34,786,673
JBrowse link
lung induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTNNB1 catenin beta 1 IEA Ensembl GO_REF:0000107 NCBI chr23:10,559,722...10,572,933
Ensembl chr23:10,559,718...10,572,927
JBrowse link
G WNT2 Wnt family member 2 IEA Ensembl GO_REF:0000107 NCBI chr14:56,123,735...56,172,113
Ensembl chr14:56,129,248...56,172,069
JBrowse link
G WNT2B Wnt family member 2B IEA Ensembl GO_REF:0000107 NCBI chr17:63,034,719...63,054,369
Ensembl chr17:63,035,883...63,047,956
JBrowse link
mammary gland branching involved in pregnancy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CSMD1 CUB and Sushi multiple domains 1 ISO (MGI:MGI:6369467|PMID:31604923) MGI PMID:31604923 MGI:MGI:6369467 NCBI chr16:55,142,990...56,673,978
Ensembl chr16:55,143,199...56,673,679
JBrowse link
G ESR1 estrogen receptor 1 IEA Ensembl GO_REF:0000107 NCBI chr 1:42,081,952...42,368,544
Ensembl chr 1:42,081,969...42,368,544
JBrowse link
G MED1 mediator complex subunit 1 IEA Ensembl GO_REF:0000107 NCBI chr 9:22,989,257...23,019,350
Ensembl chr 9:22,989,301...23,019,349
JBrowse link
G VDR vitamin D receptor IEA Ensembl GO_REF:0000107 NCBI chr27:6,852,915...6,909,466
Ensembl chr27:6,852,723...6,909,470
JBrowse link
mammary gland branching involved in thelarche term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AREG amphiregulin IEA Ensembl GO_REF:0000107 NCBI chr13:62,925,761...62,936,753
Ensembl chr13:62,926,301...62,936,738
JBrowse link
G B9D2 B9 domain containing 2 ISO (MGI:MGI:3814777|PMID:18614704) MGI PMID:18614704 MGI:MGI:3814777 NCBI chr 1:112,621,832...112,627,726
Ensembl chr 1:112,621,633...112,643,885
JBrowse link
G MED1 mediator complex subunit 1 IEA Ensembl GO_REF:0000107 NCBI chr 9:22,989,257...23,019,350
Ensembl chr 9:22,989,301...23,019,349
JBrowse link
G PHB2 prohibitin 2 IEA Ensembl GO_REF:0000107 NCBI chr27:38,075,769...38,080,440
Ensembl chr27:38,075,652...38,080,109
JBrowse link
G TGFB1 transforming growth factor beta 1 IEA Ensembl GO_REF:0000107 NCBI chr 1:112,629,476...112,643,885
Ensembl chr 1:112,621,633...112,643,885
JBrowse link
G WNT5A Wnt family member 5A IEA Ensembl GO_REF:0000107 NCBI chr20:34,756,430...34,790,937
Ensembl chr20:34,769,930...34,786,673
JBrowse link
negative regulation of branch elongation involved in ureteric bud branching by BMP signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 IEA Ensembl GO_REF:0000107 NCBI chr 8:29,997,563...30,254,307
Ensembl chr 8:29,997,569...30,004,557
JBrowse link
negative regulation of branching involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TNF tumor necrosis factor IEA Ensembl GO_REF:0000107 NCBI chr12:1,074,561...1,076,425
Ensembl chr12:1,074,552...1,076,425
JBrowse link
negative regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 ISO (MGI:MGI:3525902|PMID:15634693)
(MGI:MGI:4949995|PMID:21281623)
(PMID:12141440), (PMID:17118062)
UniProtKB
MGI
PMID:12141440, PMID:15634693, PMID:17118062, PMID:21281623 MGI:MGI:3525902, MGI:MGI:4949995 NCBI chr 8:29,997,563...30,254,307
Ensembl chr 8:29,997,569...30,004,557
JBrowse link
G TACSTD2 tumor associated calcium signal transducer 2 ISO (MGI:MGI:5315060|PMID:22194864) UniProtKB PMID:22194864 MGI:MGI:5315060 NCBI chr 5:51,122,469...51,123,753 JBrowse link
orthogonal dichotomous subdivision of terminal units involved in lung branching morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CELSR1 cadherin EGF LAG seven-pass G-type receptor 1 IEA Ensembl GO_REF:0000107 NCBI chr10:19,704,104...19,836,886
Ensembl chr10:19,707,804...19,837,481
JBrowse link
planar dichotomous subdivision of terminal units involved in lung branching morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CELSR1 cadherin EGF LAG seven-pass G-type receptor 1 IEA Ensembl GO_REF:0000107 NCBI chr10:19,704,104...19,836,886
Ensembl chr10:19,707,804...19,837,481
JBrowse link
positive regulation blood vessel branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase IEA Ensembl GO_REF:0000107 NCBI chr 9:53,118,462...53,262,092
Ensembl chr 9:53,119,641...53,261,307
JBrowse link
G MDK midkine ISO (PMID:19060126) UniProt PMID:19060126 NCBI chr 9:55,100,491...55,101,081 JBrowse link
G SIRT6 sirtuin 6 IEA Ensembl GO_REF:0000107 NCBI chr20:55,412,989...55,424,944
Ensembl chr20:55,412,646...55,424,944
JBrowse link
positive regulation of branching involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 IEA Ensembl GO_REF:0000107 NCBI chr 8:29,997,563...30,254,307
Ensembl chr 8:29,997,569...30,004,557
JBrowse link
G CTNNB1 catenin beta 1 ISO (MGI:MGI:3801531|PMID:18533146) MGI PMID:18533146 MGI:MGI:3801531 NCBI chr23:10,559,722...10,572,933
Ensembl chr23:10,559,718...10,572,927
JBrowse link
G PDGFRA platelet derived growth factor receptor alpha ISO RGD PMID:8879189 RGD:11087558 NCBI chr13:46,729,722...46,775,828
Ensembl chr13:46,730,703...46,773,278
JBrowse link
positive regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGT angiotensinogen IEA Ensembl GO_REF:0000107 NCBI chr 4:8,681,192...8,694,059
Ensembl chr 4:8,683,798...8,693,880
JBrowse link
G AGTR1 angiotensin II receptor type 1 ISO PMID:17537984 UniProt PMID:17537984 RGD:1643596 NCBI chr23:43,569,658...43,617,113
Ensembl chr23:43,614,035...43,616,238
JBrowse link
G AGTR2 angiotensin II receptor type 2 IEA Ensembl GO_REF:0000107 NCBI chr  X:88,703,551...88,708,451
Ensembl chr  X:88,705,765...88,706,853
JBrowse link
G B9D2 B9 domain containing 2 ISO PMID:17537984 UniProt PMID:17537984 RGD:1643596 NCBI chr 1:112,621,832...112,627,726
Ensembl chr 1:112,621,633...112,643,885
JBrowse link
G BMP4 bone morphogenetic protein 4 ISO PMID:17537984 UniProt PMID:17537984 RGD:1643596 NCBI chr 8:29,997,563...30,254,307
Ensembl chr 8:29,997,569...30,004,557
JBrowse link
G GDNF glial cell derived neurotrophic factor IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:70,966,694...70,991,860
Ensembl chr 4:70,971,432...70,989,714
JBrowse link
G GREM1 gremlin 1, DAN family BMP antagonist IEA Ensembl GO_REF:0000107 NCBI chr30:2,219,535...2,231,868
Ensembl chr30:2,222,898...2,225,418
JBrowse link
G HOXB7 homeobox B7 IEA Ensembl GO_REF:0000107 NCBI chr 9:24,870,037...24,874,517
Ensembl chr 9:24,870,612...24,873,453
JBrowse link
G LGR4 leucine rich repeat containing G protein-coupled receptor 4 IEA Ensembl GO_REF:0000107 NCBI chr21:47,952,019...47,995,530
Ensembl chr21:47,952,890...47,996,288
JBrowse link
G LHX1 LIM homeobox 1 ISS UniProtKB GO_REF:0000024 NCBI chr 9:36,760,890...36,768,345
Ensembl chr 9:36,761,826...36,768,164
JBrowse link
G MAGED1 MAGE family member D1 ISO (MGI:MGI:3848096|PMID:19268530) UniProtKB PMID:19268530 MGI:MGI:3848096 NCBI chr  X:44,395,091...44,458,705
Ensembl chr  X:44,395,015...44,458,705
JBrowse link
G NOG noggin ISO (MGI:MGI:2446986|PMID:12141440), (MGI:MGI:3714585|PMID:17522159) UniProtKB PMID:12141440, PMID:17522159 MGI:MGI:2446986, MGI:MGI:3714585 NCBI chr 9:31,453,604...31,456,060 JBrowse link
G PAX2 paired box 2 ISO (MGI:MGI:3704067|PMID:17314325), (MGI:MGI:3833510|PMID:17881463), (MGI:MGI:5009394|PMID:17538188) UniProtKB PMID:17314325, PMID:17538188, PMID:17881463 MGI:MGI:3704067, MGI:MGI:3833510, MGI:MGI:5009394 NCBI chr28:13,442,894...13,519,853
Ensembl chr28:13,442,893...13,532,094
JBrowse link
G PAX8 paired box 8 ISS
IEA
UniProtKB
Ensembl
GO_REF:0000024, GO_REF:0000107 NCBI chr17:37,307,130...37,331,729
Ensembl chr17:37,306,033...37,363,178
JBrowse link
G SALL1 spalt like transcription factor 1 ISO (MGI:MGI:5563280|PMID:24550112) MGI PMID:24550112 MGI:MGI:5563280 NCBI chr 2:64,242,742...64,260,021
Ensembl chr 2:64,243,987...64,259,521
JBrowse link
G SIX1 SIX homeobox 1 ISS UniProtKB GO_REF:0000024 NCBI chr 8:35,676,705...35,679,534
Ensembl chr 8:35,676,479...35,679,534
JBrowse link
G SIX4 SIX homeobox 4 IEA Ensembl GO_REF:0000107 NCBI chr 8:35,735,893...35,748,976
Ensembl chr 8:35,737,058...35,748,893
JBrowse link
G SMO smoothened, frizzled class receptor IEA Ensembl GO_REF:0000107 NCBI chr14:7,518,871...7,527,703
Ensembl chr14:7,518,856...7,528,033
JBrowse link
G SOX8 SRY-box transcription factor 8 IEA Ensembl GO_REF:0000107 NCBI chr 6:39,667,941...39,672,716
Ensembl chr 6:39,668,232...39,672,638
JBrowse link
G SOX9 SRY-box transcription factor 9 ISS UniProtKB GO_REF:0000024 NCBI chr 9:8,275,049...8,278,172
Ensembl chr 9:8,275,049...8,278,172
JBrowse link
G VEGFA vascular endothelial growth factor A ISO (MGI:MGI:3611700|PMID:16291795) UniProtKB PMID:16291795 MGI:MGI:3611700 NCBI chr12:12,209,032...12,224,978
Ensembl chr12:12,208,231...12,224,965
JBrowse link
G WNT2B Wnt family member 2B IEA Ensembl GO_REF:0000107 NCBI chr17:63,034,719...63,054,369
Ensembl chr17:63,035,883...63,047,956
JBrowse link
primary lung bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HHEX hematopoietically expressed homeobox ISO (MGI:MGI:3703395|PMID:16364283) MGI PMID:16364283 MGI:MGI:3703395 NCBI chr28:7,057,379...7,063,326
Ensembl chr28:7,057,283...7,063,330
JBrowse link
G RDH10 retinol dehydrogenase 10 IEA Ensembl GO_REF:0000107 NCBI chr29:21,886,014...21,912,451
Ensembl chr29:21,885,012...21,911,303
JBrowse link
regulation of blood vessel branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FKBPL FKBP prolyl isomerase like IEA Ensembl GO_REF:0000107 NCBI chr12:1,525,638...1,527,309
Ensembl chr12:1,525,662...1,526,711
JBrowse link
regulation of branch elongation involved in ureteric bud branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HNF1B HNF1 homeobox B IEA Ensembl GO_REF:0000107 NCBI chr 9:37,437,992...37,493,200
Ensembl chr 9:37,438,583...37,492,993
JBrowse link
G SIX1 SIX homeobox 1 ISS UniProtKB GO_REF:0000024 NCBI chr 8:35,676,705...35,679,534
Ensembl chr 8:35,676,479...35,679,534
JBrowse link
G SIX4 SIX homeobox 4 IEA Ensembl GO_REF:0000107 NCBI chr 8:35,735,893...35,748,976
Ensembl chr 8:35,737,058...35,748,893
JBrowse link
regulation of branching involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SOX9 SRY-box transcription factor 9 ISO (MGI:MGI:5523731|PMID:24191021) MGI PMID:24191021 MGI:MGI:5523731 NCBI chr 9:8,275,049...8,278,172
Ensembl chr 9:8,275,049...8,278,172
JBrowse link
regulation of branching involved in mammary gland duct morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B9D2 B9 domain containing 2 ISO (MGI:MGI:3761053|PMID:17898001) MGI PMID:17898001 MGI:MGI:3761053 NCBI chr 1:112,621,832...112,627,726
Ensembl chr 1:112,621,633...112,643,885
JBrowse link
G CAV3 caveolin 3 IEA Ensembl GO_REF:0000107 NCBI chr20:9,384,901...9,398,055
Ensembl chr20:9,384,901...9,401,196
JBrowse link
G ETV5 ETS variant transcription factor 5 ISO (MGI:MGI:2667785|PMID:12871699) MGI PMID:12871699 MGI:MGI:2667785 NCBI chr34:18,729,684...18,791,667
Ensembl chr34:18,731,943...18,789,386
JBrowse link
G PHB2 prohibitin 2 IEA Ensembl GO_REF:0000107 NCBI chr27:38,075,769...38,080,440
Ensembl chr27:38,075,652...38,080,109
JBrowse link
G TGFB1 transforming growth factor beta 1 IEA Ensembl GO_REF:0000107 NCBI chr 1:112,629,476...112,643,885
Ensembl chr 1:112,621,633...112,643,885
JBrowse link
G WNT5A Wnt family member 5A IEA Ensembl GO_REF:0000107 NCBI chr20:34,756,430...34,790,937
Ensembl chr20:34,769,930...34,786,673
JBrowse link
regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SIX2 SIX homeobox 2 IEA Ensembl GO_REF:0000107 NCBI chr10:47,399,152...47,403,503
Ensembl chr10:47,400,034...47,403,509
JBrowse link
tertiary branching involved in mammary gland duct morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AR androgen receptor IEA Ensembl GO_REF:0000107 NCBI chr24:34,713,390...34,731,461
NCBI chr  X:51,969,785...52,167,450
Ensembl chr  X:51,969,785...52,151,912
JBrowse link
G PGR progesterone receptor IEA Ensembl GO_REF:0000107 NCBI chr21:447,197...552,511
Ensembl chr21:447,319...552,511
JBrowse link
G WNT4 Wnt family member 4 IEA Ensembl GO_REF:0000107 NCBI chr 2:77,112,045...77,129,702
Ensembl chr 2:77,101,300...77,127,111
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16162
    developmental process 6290
      anatomical structure morphogenesis 2778
        tube morphogenesis 894
          branching morphogenesis of an epithelial tube 183
            branching involved in blood vessel morphogenesis + 41
            branching involved in lymph vessel morphogenesis 1
            branching involved in mammary gland duct morphogenesis + 28
            branching involved in open tracheal system development + 0
            branching involved in ureteric bud morphogenesis + 64
            epithelial tube branching involved in lung morphogenesis + 37
            tube fusion + 0
Path 2
Term Annotations click to browse term
  biological_process 16162
    developmental process 6290
      anatomical structure development 5839
        tissue development 2014
          epithelium development 1203
            morphogenesis of an epithelium 564
              epithelial tube morphogenesis 381
                branching morphogenesis of an epithelial tube 183
                  branching involved in blood vessel morphogenesis + 41
                  branching involved in lymph vessel morphogenesis 1
                  branching involved in mammary gland duct morphogenesis + 28
                  branching involved in open tracheal system development + 0
                  branching involved in ureteric bud morphogenesis + 64
                  epithelial tube branching involved in lung morphogenesis + 37
                  tube fusion + 0
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.