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ONTOLOGY REPORT - ANNOTATIONS


Term:branching morphogenesis of an epithelial tube
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Accession:GO:0048754 term browser browse the term
Definition:The process in which the anatomical structures of branches in an epithelial tube are generated and organized. A tube is a long hollow cylinder.
Synonyms:related_synonym: tubulogenesis


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branching morphogenesis of an epithelial tube term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4GALT1 beta-1,4-galactosyltransferase 1 ISO (MGI:MGI:2178150|PMID:11900463)
(MGI:MGI:3052392|PMID:15282149)
MGI PMID:11900463, PMID:15282149 MGI:MGI:2178150, MGI:MGI:3052392 NCBI chr 9:33,104,077...33,167,336
Ensembl chr 9:33,104,082...33,167,356
JBrowse link
G BMP4 bone morphogenetic protein 4 IDA (PMID:10706139) UniProtKB PMID:10706139 NCBI chr14:53,949,736...53,956,891
Ensembl chr14:53,949,736...53,958,761
JBrowse link
G BMP7 bone morphogenetic protein 7 IEA Ensembl GO_REF:0000107 NCBI chr20:57,168,753...57,266,641
Ensembl chr20:57,168,753...57,266,641
JBrowse link
G CASR calcium sensing receptor IEA Ensembl GO_REF:0000107 NCBI chr 3:122,183,668...122,291,629
Ensembl chr 3:122,183,683...122,291,629
Ensembl chr 3:122,183,683...122,291,629
JBrowse link
G CLIC4 chloride intracellular channel 4 IEA Ensembl GO_REF:0000107 NCBI chr 1:24,745,447...24,844,321
Ensembl chr 1:24,745,382...24,844,321
JBrowse link
G DICER1 dicer 1, ribonuclease III ISO (MGI:MGI:3617296|PMID:16452165) MGI PMID:16452165 MGI:MGI:3617296 NCBI chr14:95,086,228...95,158,263
Ensembl chr14:95,086,228...95,158,010
JBrowse link
G EGF epidermal growth factor IEA Ensembl GO_REF:0000107 NCBI chr 4:109,912,883...110,013,766
Ensembl chr 4:109,912,883...110,013,766
JBrowse link
G FGF10 fibroblast growth factor 10 IDA (PMID:17959718) UniProtKB PMID:17959718 NCBI chr 5:44,300,247...44,389,706
Ensembl chr 5:44,300,247...44,389,706
Ensembl chr 5:44,300,247...44,389,706
JBrowse link
G GDF7 growth differentiation factor 7 IEA Ensembl GO_REF:0000107 NCBI chr 2:20,667,144...20,679,243
Ensembl chr 2:20,667,144...20,679,243
JBrowse link
G GLI2 GLI family zinc finger 2 ISS UniProtKB GO_REF:0000024 NCBI chr 2:120,735,868...120,992,653
Ensembl chr 2:120,735,623...120,992,653
JBrowse link
G GLI3 GLI family zinc finger 3 ISO (MGI:MGI:3608164|PMID:16247775) MGI PMID:16247775 MGI:MGI:3608164 NCBI chr 7:41,960,949...42,237,209
Ensembl chr 7:41,960,949...42,237,870
JBrowse link
G HNF1B HNF1 homeobox B IEA Ensembl GO_REF:0000107 NCBI chr17:37,686,431...37,745,059
Ensembl chr17:37,686,431...37,745,105
JBrowse link
G IGF1 insulin like growth factor 1 ISO (MGI:MGI:3616136|PMID:15059953) MGI PMID:15059953 MGI:MGI:3616136 NCBI chr12:102,395,860...102,481,839
Ensembl chr12:102,395,874...102,481,744
JBrowse link
G KDR kinase insert domain receptor ISO (MGI:MGI:3613102|PMID:16375885) MGI PMID:16375885 MGI:MGI:3613102 NCBI chr 4:55,078,481...55,125,595
Ensembl chr 4:55,078,481...55,125,595
JBrowse link
G LAMA5 laminin subunit alpha 5 ISO (MGI:MGI:2678847|PMID:14568553) MGI PMID:14568553 MGI:MGI:2678847 NCBI chr20:62,309,060...62,367,318
Ensembl chr20:62,307,955...62,367,312
JBrowse link
G MET MET proto-oncogene, receptor tyrosine kinase IMP (PMID:16153003) UniProtKB PMID:16153003 NCBI chr 7:116,672,196...116,798,386
Ensembl chr 7:116,672,196...116,798,386
JBrowse link
G MGP matrix Gla protein ISO fetal lung RGD PMID:15136295 RGD:1582506 NCBI chr12:14,880,864...14,885,854
Ensembl chr12:14,880,864...14,885,857
JBrowse link
G MKS1 MKS transition zone complex subunit 1 IEA Ensembl GO_REF:0000107 NCBI chr17:58,205,436...58,219,605
Ensembl chr17:58,205,441...58,219,605
Ensembl chr17:58,205,441...58,219,605
JBrowse link
G MMP14 matrix metallopeptidase 14 IEA Ensembl GO_REF:0000107 NCBI chr14:22,836,585...22,847,758
Ensembl chr14:22,836,560...22,849,027
JBrowse link
G MYCN MYCN proto-oncogene, bHLH transcription factor IEA Ensembl GO_REF:0000107 NCBI chr 2:15,940,550...15,947,004
Ensembl chr 2:15,940,550...15,947,007
JBrowse link
G NKX3-1 NK3 homeobox 1 ISS UniProtKB GO_REF:0000024 NCBI chr 8:23,678,693...23,682,938
Ensembl chr 8:23,678,697...23,682,938
JBrowse link
G NOTCH1 notch receptor 1 IEA Ensembl GO_REF:0000107 NCBI chr 9:136,494,433...136,546,048
Ensembl chr 9:136,494,433...136,546,048
JBrowse link
G PAK1 p21 (RAC1) activated kinase 1 IMP (PMID:20457839) UniProtKB PMID:20457839 NCBI chr11:77,322,017...77,514,957
Ensembl chr11:77,321,707...77,474,635
Ensembl chr11:77,321,707...77,474,635
JBrowse link
G PKD1 polycystin 1, transient receptor potential channel interacting IDA (PMID:12482949) UniProtKB PMID:12482949 NCBI chr16:2,088,708...2,135,898
Ensembl chr16:2,088,708...2,135,898
Ensembl chr16:2,088,708...2,135,898
JBrowse link
G PPP1CA protein phosphatase 1 catalytic subunit alpha IEA Ensembl GO_REF:0000107 NCBI chr11:67,398,183...67,401,858
Ensembl chr11:67,398,183...67,421,183
JBrowse link
G PXN paxillin ISO (MGI:MGI:2680875|PMID:14636584) MGI PMID:14636584 MGI:MGI:2680875 NCBI chr12:120,210,447...120,265,737
Ensembl chr12:120,210,439...120,265,771
JBrowse link
G RASIP1 Ras interacting protein 1 ISS UniProtKB GO_REF:0000024 NCBI chr19:48,720,585...48,740,610
Ensembl chr19:48,720,585...48,740,610
JBrowse link
G SEMA5A semaphorin 5A ISO (MGI:MGI:3575993|PMID:15743826) MGI PMID:15743826 MGI:MGI:3575993 NCBI chr 5:9,035,030...9,546,121
Ensembl chr 5:9,035,033...9,546,075
JBrowse link
G SHH sonic hedgehog signaling molecule ISS UniProtKB GO_REF:0000024 NCBI chr 7:155,799,980...155,812,463
Ensembl chr 7:155,799,980...155,812,463
JBrowse link
G SLIT2 slit guidance ligand 2 IMP
IDA
(PMID:19005219)
(PMID:18345009)
UniProtKB PMID:18345009, PMID:19005219 NCBI chr 4:20,251,905...20,620,561
Ensembl chr 4:20,251,905...20,620,561
JBrowse link
G SPRY2 sprouty RTK signaling antagonist 2 ISO (MGI:MGI:1331548|PMID:10074434) MGI PMID:10074434 MGI:MGI:1331548 NCBI chr13:80,335,976...80,341,126
Ensembl chr13:80,335,976...80,341,126
JBrowse link
G TIMELESS timeless circadian regulator IEA Ensembl GO_REF:0000107 NCBI chr12:56,416,363...56,449,426
Ensembl chr12:56,416,363...56,449,426
JBrowse link
G TMEM67 transmembrane protein 67 ISO (MGI:MGI:4441259|PMID:17185389) UniProtKB PMID:17185389 MGI:MGI:4441259 NCBI chr 8:93,754,844...93,832,653
Ensembl chr 8:93,754,844...93,819,234
JBrowse link
G VEGFA vascular endothelial growth factor A ISS BHF-UCL GO_REF:0000024 NCBI chr 6:43,770,209...43,786,487
Ensembl chr 6:43,770,184...43,786,487
JBrowse link
G WNT4 Wnt family member 4 ISO (MGI:MGI:2178881|PMID:11948913) MGI PMID:11948913 MGI:MGI:2178881 NCBI chr 1:22,117,308...22,143,981
Ensembl chr 1:22,117,313...22,143,969
JBrowse link
G WNT9B Wnt family member 9B ISO (MGI:MGI:3588895|PMID:16054034) MGI PMID:16054034 MGI:MGI:3588895 NCBI chr17:46,833,201...46,886,738
Ensembl chr17:46,833,201...46,886,730
JBrowse link
branch elongation involved in mammary gland duct branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TGFB1 transforming growth factor beta 1 IEA Ensembl GO_REF:0000107 NCBI chr19:41,330,323...41,353,922
Ensembl chr19:41,301,587...41,353,922
JBrowse link
branch elongation involved in ureteric bud branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGF1 fibroblast growth factor 1 IDA (PMID:11731227) UniProtKB PMID:11731227 NCBI chr 5:142,592,178...142,698,070
Ensembl chr 5:142,592,178...142,698,070
JBrowse link
branching involved in blood vessel morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACVR1 activin A receptor type 1 IEA Ensembl GO_REF:0000107 NCBI chr 2:157,736,446...157,876,330
Ensembl chr 2:157,736,444...157,876,330
Ensembl chr 2:157,736,444...157,876,330
JBrowse link
G AHR aryl hydrocarbon receptor ISO (MGI:MGI:1889403|PMID:10973493) DFLAT PMID:10973493 MGI:MGI:1889403 NCBI chr 7:17,298,652...17,346,147
Ensembl chr 7:16,916,359...17,346,152
JBrowse link
G COL4A1 collagen type IV alpha 1 chain IMP (PMID:20818663) BHF-UCL PMID:20818663 NCBI chr13:110,148,963...110,307,157
Ensembl chr13:110,148,963...110,307,157
JBrowse link
G CTNNB1 catenin beta 1 IC (PMID:20123964) BHF-UCL PMID:20123964 NCBI chr 3:41,199,422...41,240,445
Ensembl chr 3:41,194,741...41,260,096
JBrowse link
G CXCL12 C-X-C motif chemokine ligand 12 ISO (MGI:MGI:3578491|PMID:15626744) MGI PMID:15626744 MGI:MGI:3578491 NCBI chr10:44,292,088...44,385,097
Ensembl chr10:44,370,165...44,386,493
JBrowse link
G CXCR4 C-X-C motif chemokine receptor 4 ISO (MGI:MGI:3578491|PMID:15626744) MGI PMID:15626744 MGI:MGI:3578491 NCBI chr 2:136,114,349...136,118,149
Ensembl chr 2:136,114,349...136,118,149
Ensembl chr 2:136,114,349...136,118,149
JBrowse link
G DLL4 delta like canonical Notch ligand 4 ISS BHF-UCL GO_REF:0000024 NCBI chr15:40,929,340...40,939,073
Ensembl chr15:40,929,340...40,939,073
JBrowse link
G EDN1 endothelin 1 IEA Ensembl GO_REF:0000107 NCBI chr 6:12,256,463...12,297,194
Ensembl chr 6:12,290,361...12,297,194
JBrowse link
G EDNRA endothelin receptor type A IEA Ensembl GO_REF:0000107 NCBI chr 4:147,481,097...147,544,954
Ensembl chr 4:147,480,917...147,544,954
JBrowse link
G ENG endoglin ISS (PMID:8194490) BHF-UCL PMID:8194490 NCBI chr 9:127,815,012...127,854,773
Ensembl chr 9:127,815,013...127,854,658
Ensembl chr 9:127,815,013...127,854,658
JBrowse link
G FGF8 fibroblast growth factor 8 IEA Ensembl GO_REF:0000107 NCBI chr10:101,770,109...101,780,369
Ensembl chr10:101,770,130...101,780,369
JBrowse link
G FLT1 fms related receptor tyrosine kinase 1 ISO (MGI:MGI:3045573|PMID:14982871) MGI PMID:14982871 MGI:MGI:3045573 NCBI chr13:28,300,346...28,495,128
Ensembl chr13:28,300,346...28,495,145
JBrowse link
G FOXC2 forkhead box C2 IEA Ensembl GO_REF:0000107 NCBI chr16:86,566,829...86,569,728
Ensembl chr16:86,566,829...86,569,728
JBrowse link
G GBX2 gastrulation brain homeobox 2 IEA Ensembl GO_REF:0000107 NCBI chr 2:236,165,236...236,168,386
Ensembl chr 2:236,165,236...236,168,386
JBrowse link
G GDF2 growth differentiation factor 2 IDA (PMID:20406889) DFLAT PMID:20406889 NCBI chr10:47,322,454...47,327,588
Ensembl chr10:47,322,454...47,327,588
JBrowse link
G GNA13 G protein subunit alpha 13 IEA Ensembl GO_REF:0000107 NCBI chr17:65,009,289...65,056,740
Ensembl chr17:65,009,289...65,056,740
JBrowse link
G IHH Indian hedgehog signaling molecule IEA Ensembl GO_REF:0000107 NCBI chr 2:219,054,424...219,060,921
Ensembl chr 2:219,054,424...219,060,921
JBrowse link
G KDR kinase insert domain receptor IMP (PMID:23688497) BHF-UCL PMID:23688497 NCBI chr 4:55,078,481...55,125,595
Ensembl chr 4:55,078,481...55,125,595
JBrowse link
G LEF1 lymphoid enhancer binding factor 1 IEA Ensembl GO_REF:0000107 NCBI chr 4:108,047,548...108,168,932
Ensembl chr 4:108,047,545...108,168,956
JBrowse link
G NFATC3 nuclear factor of activated T cells 3 ISO (MGI:MGI:2136698|PMID:11439183) MGI PMID:11439183 MGI:MGI:2136698 NCBI chr16:68,085,370...68,229,259
Ensembl chr16:68,084,751...68,229,259
JBrowse link
G NFATC4 nuclear factor of activated T cells 4 IEA Ensembl GO_REF:0000107 NCBI chr14:24,366,911...24,379,604
Ensembl chr14:24,365,673...24,379,604
JBrowse link
G NOTCH4 notch receptor 4 ISS UniProtKB GO_REF:0000024 NCBI chr 6:32,194,843...32,224,067
Ensembl chr 6:32,194,843...32,224,067
JBrowse link
G NRARP NOTCH regulated ankyrin repeat protein IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:137,299,631...137,302,271
Ensembl chr 9:137,299,631...137,302,271
JBrowse link
G NRP1 neuropilin 1 ISS (PMID:24401374) BHF-UCL PMID:24401374 GO_REF:0000024 NCBI chr10:33,177,493...33,334,667
Ensembl chr10:33,177,492...33,336,262
JBrowse link
G PITX2 paired like homeodomain 2 ISO (MGI:MGI:2389284|PMID:12397115) MGI PMID:12397115 MGI:MGI:2389284 NCBI chr 4:110,617,423...110,642,123
Ensembl chr 4:110,617,423...110,642,123
JBrowse link
G PLXND1 plexin D1 IEA Ensembl GO_REF:0000107 NCBI chr 3:129,555,214...129,606,676
Ensembl chr 3:129,555,214...129,606,676
Ensembl chr 3:129,555,214...129,606,676
JBrowse link
G PPP3R1 protein phosphatase 3 regulatory subunit B, alpha ISO (MGI:MGI:2136698|PMID:11439183) MGI PMID:11439183 MGI:MGI:2136698 NCBI chr 2:68,178,857...68,252,532
Ensembl chr 2:68,178,857...68,256,237
JBrowse link
G RBM15 RNA binding motif protein 15 IEA Ensembl GO_REF:0000107 NCBI chr 1:110,339,377...110,346,677
Ensembl chr 1:110,338,506...110,346,681
JBrowse link
G SEMA3E semaphorin 3E ISS UniProtKB GO_REF:0000024 NCBI chr 7:83,363,238...83,649,139
Ensembl chr 7:83,363,238...83,649,139
JBrowse link
G SEMA5A semaphorin 5A ISO (MGI:MGI:3575993|PMID:15743826) MGI PMID:15743826 MGI:MGI:3575993 NCBI chr 5:9,035,030...9,546,121
Ensembl chr 5:9,035,033...9,546,075
JBrowse link
G SFRP2 secreted frizzled related protein 2 ISS BHF-UCL GO_REF:0000024 NCBI chr 4:153,780,591...153,789,083
Ensembl chr 4:153,780,591...153,789,083
JBrowse link
G SHH sonic hedgehog signaling molecule ISS UniProtKB GO_REF:0000024 NCBI chr 7:155,799,980...155,812,463
Ensembl chr 7:155,799,980...155,812,463
JBrowse link
G SRF serum response factor IEA Ensembl GO_REF:0000107 NCBI chr 6:43,171,269...43,181,506
Ensembl chr 6:43,171,269...43,181,506
JBrowse link
G STK4 serine/threonine kinase 4 IEA Ensembl GO_REF:0000107 NCBI chr20:44,966,470...45,080,021
Ensembl chr20:44,966,479...45,080,021
JBrowse link
G TBX20 T-box transcription factor 20 IEA Ensembl GO_REF:0000107 NCBI chr 7:35,199,936...35,254,100
Ensembl chr 7:35,202,430...35,254,100
JBrowse link
G TGFBR2 transforming growth factor beta receptor 2 ISS BHF-UCL GO_REF:0000024 NCBI chr 3:30,606,472...30,694,142
Ensembl chr 3:30,606,601...30,694,142
Ensembl chr 3:30,606,601...30,694,142
JBrowse link
G VEGFA vascular endothelial growth factor A ISS
IMP
(PMID:23083510), (PMID:23688497) BHF-UCL PMID:23083510, PMID:23688497 GO_REF:0000024 NCBI chr 6:43,770,209...43,786,487
Ensembl chr 6:43,770,184...43,786,487
JBrowse link
branching involved in lymph vessel morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NFATC1 nuclear factor of activated T cells 1 ISO (MGI:MGI:3848105|PMID:19233265) MGI PMID:19233265 MGI:MGI:3848105 NCBI chr18:79,395,930...79,529,323
Ensembl chr18:79,395,856...79,529,325
JBrowse link
branching involved in mammary gland duct morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BTRC beta-transducin repeat containing E3 ubiquitin protein ligase IEA Ensembl GO_REF:0000107 NCBI chr10:101,353,808...101,557,313
Ensembl chr10:101,354,033...101,557,321
JBrowse link
G CCL11 C-C motif chemokine ligand 11 IEA Ensembl GO_REF:0000107 NCBI chr17:34,285,742...34,288,334
Ensembl chr17:34,285,742...34,288,334
JBrowse link
G CSF1 colony stimulating factor 1 IEA Ensembl GO_REF:0000107 NCBI chr 1:109,910,506...109,930,992
Ensembl chr 1:109,910,242...109,930,992
JBrowse link
G DDR1 discoidin domain receptor tyrosine kinase 1 IEA Ensembl GO_REF:0000107 NCBI chr 6:30,880,958...30,900,156
Ensembl chr 6:30,876,421...30,900,156
JBrowse link
G EPHA2 EPH receptor A2 ISS UniProtKB GO_REF:0000024 NCBI chr 1:16,124,337...16,156,104
Ensembl chr 1:16,124,337...16,156,069
JBrowse link
G ETV4 ETS variant transcription factor 4 ISO (MGI:MGI:2667785|PMID:12871699)
(MGI:MGI:3828920|PMID:18977342)
MGI PMID:12871699, PMID:18977342 MGI:MGI:2667785, MGI:MGI:3828920 NCBI chr17:43,527,843...43,546,340
Ensembl chr17:43,527,844...43,579,620
JBrowse link
G KDM5B lysine demethylase 5B IEA Ensembl GO_REF:0000107 NCBI chr 1:202,724,495...202,809,470
Ensembl chr 1:202,724,495...202,808,487
Ensembl chr 1:202,724,495...202,808,487
JBrowse link
G LRP5 LDL receptor related protein 5 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:68,298,866...68,449,275
Ensembl chr11:68,312,591...68,449,275
JBrowse link
G LRP5L LDL receptor related protein 5 like IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr22:25,351,418...25,405,410
Ensembl chr22:25,351,418...25,405,377
JBrowse link
G LRP6 LDL receptor related protein 6 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:12,116,025...12,267,044
Ensembl chr12:12,116,025...12,267,044
JBrowse link
G MSX2 msh homeobox 2 IEA Ensembl GO_REF:0000107 NCBI chr 5:174,724,582...174,730,896
Ensembl chr 5:174,724,582...174,730,896
JBrowse link
G PML PML nuclear body scaffold IEA Ensembl GO_REF:0000107 NCBI chr15:73,994,716...74,047,827
Ensembl chr15:73,994,673...74,047,827
JBrowse link
G SLC12A2 solute carrier family 12 member 2 ISO (MGI:MGI:2180693|PMID:8864124) MGI PMID:8864124 MGI:MGI:2180693 NCBI chr 5:128,083,766...128,189,677
Ensembl chr 5:128,083,766...128,189,677
JBrowse link
G SRC SRC proto-oncogene, non-receptor tyrosine kinase IEA Ensembl GO_REF:0000107 NCBI chr20:37,344,690...37,406,050
Ensembl chr20:37,344,685...37,406,050
JBrowse link
G TBX3 T-box transcription factor 3 IEA Ensembl GO_REF:0000107 NCBI chr12:114,670,255...114,684,175
Ensembl chr12:114,670,255...114,684,175
JBrowse link
branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAMTS16 ADAM metallopeptidase with thrombospondin type 1 motif 16 IEA Ensembl GO_REF:0000107 NCBI chr 5:5,140,330...5,320,304
Ensembl chr 5:5,140,330...5,320,304
JBrowse link
G AGT angiotensinogen NOT ISO (MGI:MGI:2655949|PMID:12657564)
(MGI:MGI:77583|PMID:8675666)
MGI PMID:8675666, PMID:12657564 MGI:MGI:2655949, MGI:MGI:77583 NCBI chr 1:230,702,523...230,745,583
Ensembl chr 1:230,702,523...230,714,122
JBrowse link
G BCL2 BCL2 apoptosis regulator IEA Ensembl GO_REF:0000107 NCBI chr18:63,123,346...63,320,280
Ensembl chr18:63,123,346...63,320,128
JBrowse link
G BMP2 bone morphogenetic protein 2 ISS UniProtKB GO_REF:0000024 NCBI chr20:6,767,686...6,780,246
Ensembl chr20:6,767,686...6,780,246
JBrowse link
G BMP4 bone morphogenetic protein 4 IDA (PMID:12631064) UniProtKB PMID:12631064 NCBI chr14:53,949,736...53,956,891
Ensembl chr14:53,949,736...53,958,761
JBrowse link
G CD44 CD44 molecule (Indian blood group) ISO (MGI:MGI:2449954|PMID:10926769) MGI PMID:10926769 MGI:MGI:2449954 NCBI chr11:35,139,168...35,232,402
Ensembl chr11:35,138,882...35,232,402
Ensembl chr11:35,138,882...35,232,402
JBrowse link
G CITED1 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1 NOT ISS
ISO
(MGI:MGI:3717986|PMID:17615577) UniProtKB
UniProtKB
PMID:17615577 GO_REF:0000024, MGI:MGI:3717986 NCBI chr  X:72,301,646...72,307,157
Ensembl chr  X:72,301,638...72,307,187
JBrowse link
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 NOT ISO (MGI:MGI:3717986|PMID:17615577) UniProtKB PMID:17615577 MGI:MGI:3717986 NCBI chr 6:139,371,807...139,374,648
Ensembl chr 6:139,371,807...139,374,648
JBrowse link
G CTNNB1 catenin beta 1 IEA Ensembl GO_REF:0000107 NCBI chr 3:41,199,422...41,240,445
Ensembl chr 3:41,194,741...41,260,096
JBrowse link
G CTNNBIP1 catenin beta interacting protein 1 IEA Ensembl GO_REF:0000107 NCBI chr 1:9,848,276...9,910,322
Ensembl chr 1:9,848,276...9,910,336
JBrowse link
G DCHS1 dachsous cadherin-related 1 IEA Ensembl GO_REF:0000107 NCBI chr11:6,621,330...6,655,809
Ensembl chr11:6,621,330...6,655,809
JBrowse link
G DLG1 discs large MAGUK scaffold protein 1 IEA Ensembl GO_REF:0000107 NCBI chr 3:197,042,560...197,299,321
Ensembl chr 3:197,042,560...197,299,330
JBrowse link
G DSPP dentin sialophosphoprotein ISO (MGI:MGI:3686561|PMID:16937369) MGI PMID:16937369 MGI:MGI:3686561 NCBI chr 4:87,608,529...87,616,873
Ensembl chr 4:87,608,529...87,616,873
JBrowse link
G EYA1 EYA transcriptional coactivator and phosphatase 1 IEA Ensembl GO_REF:0000107 NCBI chr 8:71,197,433...71,548,104
Ensembl chr 8:71,197,433...71,592,025
JBrowse link
G FAT4 FAT atypical cadherin 4 ISO (MGI:MGI:4939936|PMID:21303848) MGI PMID:21303848 MGI:MGI:4939936 NCBI chr 4:125,314,918...125,492,932
Ensembl chr 4:125,314,955...125,492,932
Ensembl chr 4:125,314,955...125,492,932
Ensembl chr 4:125,314,955...125,492,932
JBrowse link
G FGF2 fibroblast growth factor 2 IDA (PMID:12631064) UniProtKB PMID:12631064 NCBI chr 4:122,826,708...122,898,236
Ensembl chr 4:122,826,708...122,898,236
JBrowse link
G FGF8 fibroblast growth factor 8 IEA Ensembl GO_REF:0000107 NCBI chr10:101,770,109...101,780,369
Ensembl chr10:101,770,130...101,780,369
JBrowse link
G FOXD1 forkhead box D1 ISO (MGI:MGI:2675756|PMID:13678594) MGI PMID:13678594 MGI:MGI:2675756 NCBI chr 5:73,446,266...73,448,777
Ensembl chr 5:73,444,827...73,448,777
JBrowse link
G GDNF glial cell derived neurotrophic factor ISS UniProtKB GO_REF:0000024 NCBI chr 5:37,812,677...37,840,044
Ensembl chr 5:37,812,677...37,840,041
JBrowse link
G GLI3 GLI family zinc finger 3 IEA Ensembl GO_REF:0000107 NCBI chr 7:41,960,949...42,237,209
Ensembl chr 7:41,960,949...42,237,870
JBrowse link
G GPC3 glypican 3 IEA Ensembl GO_REF:0000107 NCBI chr  X:133,535,745...133,985,616
Ensembl chr  X:133,535,745...133,985,594
Ensembl chr  X:133,535,745...133,985,594
JBrowse link
G GREB1L GREB1 like retinoic acid receptor coactivator IEA Ensembl GO_REF:0000107 NCBI chr18:21,242,225...21,528,503
Ensembl chr18:21,242,242...21,525,417
JBrowse link
G GZF1 GDNF inducible zinc finger protein 1 IEA Ensembl GO_REF:0000107 NCBI chr20:23,361,585...23,375,399
Ensembl chr20:23,362,182...23,373,062
JBrowse link
G HOXA11 homeobox A11 ISS UniProtKB GO_REF:0000024 NCBI chr 7:27,181,157...27,185,232
Ensembl chr 7:27,181,157...27,185,232
Ensembl chr 7:27,181,157...27,185,232
JBrowse link
G HOXD11 homeobox D11 ISS UniProtKB GO_REF:0000024 NCBI chr 2:176,107,280...176,109,754
Ensembl chr 2:176,104,216...176,109,754
JBrowse link
G ILK integrin linked kinase IEA Ensembl GO_REF:0000107 NCBI chr11:6,603,748...6,610,873
Ensembl chr11:6,603,708...6,610,874
JBrowse link
G LAMA5 laminin subunit alpha 5 IEA Ensembl GO_REF:0000107 NCBI chr20:62,309,060...62,367,318
Ensembl chr20:62,307,955...62,367,312
JBrowse link
G LHX1 LIM homeobox 1 IEA Ensembl GO_REF:0000107 NCBI chr17:36,937,475...36,944,612
Ensembl chr17:36,936,785...36,944,612
JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor ISS UniProtKB GO_REF:0000024 NCBI chr 8:127,735,434...127,742,951
Ensembl chr 8:127,735,434...127,742,951
JBrowse link
G NPNT nephronectin ISS (PMID:15754038) BHF-UCL PMID:15754038 NCBI chr 4:105,895,453...105,971,671
Ensembl chr 4:105,894,775...106,004,027
JBrowse link
G PAX2 paired box 2 IEP
ISS
(PMID:1337742) UniProtKB PMID:1337742 GO_REF:0000024 NCBI chr10:100,735,396...100,829,944
Ensembl chr10:100,735,603...100,829,941
Ensembl chr10:100,735,603...100,829,941
JBrowse link
G PAX8 paired box 8 IEP (PMID:1337742) UniProtKB PMID:1337742 NCBI chr 2:113,215,997...113,278,921
Ensembl chr 2:113,215,997...113,278,921
JBrowse link
G PBX1 PBX homeobox 1 IEA Ensembl GO_REF:0000107 NCBI chr 1:164,559,184...164,886,047
Ensembl chr 1:164,555,584...164,899,296
JBrowse link
G PGF placental growth factor IEA Ensembl GO_REF:0000107 NCBI chr14:74,941,830...74,955,764
Ensembl chr14:74,941,834...74,955,626
JBrowse link
G PKD2 polycystin 2, transient receptor potential cation channel IEP (PMID:11891195) UniProtKB PMID:11891195 NCBI chr 4:88,007,635...88,077,779
Ensembl chr 4:88,007,635...88,077,777
JBrowse link
G PSPN persephin ISO (MGI:MGI:1196665|PMID:9491986) MGI PMID:9491986 MGI:MGI:1196665 NCBI chr19:6,375,148...6,375,916
Ensembl chr19:6,375,148...6,379,058
JBrowse link
G PTCH1 patched 1 IEA Ensembl GO_REF:0000107 NCBI chr 9:95,442,980...95,516,971
Ensembl chr 9:95,442,980...95,517,057
JBrowse link
G SALL1 spalt like transcription factor 1 ISS UniProtKB GO_REF:0000024 NCBI chr16:51,135,982...51,151,270
Ensembl chr16:51,135,975...51,151,367
JBrowse link
G SHH sonic hedgehog signaling molecule ISS UniProtKB GO_REF:0000024 NCBI chr 7:155,799,980...155,812,463
Ensembl chr 7:155,799,980...155,812,463
JBrowse link
G SIX1 SIX homeobox 1 ISS UniProtKB GO_REF:0000024 NCBI chr14:60,643,421...60,649,489
Ensembl chr14:60,643,421...60,658,259
JBrowse link
G SMAD4 SMAD family member 4 IEA Ensembl GO_REF:0000107 NCBI chr18:51,030,213...51,085,042
Ensembl chr18:51,028,394...51,085,045
JBrowse link
G SOX9 SRY-box transcription factor 9 IEA Ensembl GO_REF:0000107 NCBI chr17:72,121,020...72,126,416
Ensembl chr17:72,121,020...72,126,416
JBrowse link
G TCF21 transcription factor 21 ISS BHF-UCL GO_REF:0000024 NCBI chr 6:133,889,113...133,895,537
Ensembl chr 6:133,889,138...133,895,553
Ensembl chr 6:133,889,138...133,895,553
JBrowse link
G TIMELESS timeless circadian regulator ISO RGD PMID:10963667 RGD:2308864 NCBI chr12:56,416,363...56,449,426
Ensembl chr12:56,416,363...56,449,426
JBrowse link
G WNT1 Wnt family member 1 IEA Ensembl GO_REF:0000107 NCBI chr12:48,978,322...48,982,620
Ensembl chr12:48,978,322...48,982,620
JBrowse link
G WNT4 Wnt family member 4 IEA Ensembl GO_REF:0000107 NCBI chr 1:22,117,308...22,143,981
Ensembl chr 1:22,117,313...22,143,969
JBrowse link
G WNT6 Wnt family member 6 IEA Ensembl GO_REF:0000107 NCBI chr 2:218,859,805...218,874,233
Ensembl chr 2:218,859,805...218,874,233
JBrowse link
G WNT9B Wnt family member 9B IEA Ensembl GO_REF:0000107 NCBI chr17:46,833,201...46,886,738
Ensembl chr17:46,833,201...46,886,730
JBrowse link
G WT1 WT1 transcription factor IGI (PMID:10101119) UniProtKB PMID:10101119 NCBI chr11:32,387,775...32,435,539
Ensembl chr11:32,387,775...32,435,564
Ensembl chr11:32,387,775...32,435,564
JBrowse link
bud dilation involved in lung branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 IDA (PMID:8674409) MGI PMID:8674409 NCBI chr14:53,949,736...53,956,891
Ensembl chr14:53,949,736...53,958,761
JBrowse link
bud elongation involved in lung branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 IEA Ensembl GO_REF:0000107 NCBI chr14:53,949,736...53,956,891
Ensembl chr14:53,949,736...53,958,761
JBrowse link
G FGF10 fibroblast growth factor 10 IEA Ensembl GO_REF:0000107 NCBI chr 5:44,300,247...44,389,706
Ensembl chr 5:44,300,247...44,389,706
Ensembl chr 5:44,300,247...44,389,706
JBrowse link
G FGFR2 fibroblast growth factor receptor 2 ISS UniProtKB GO_REF:0000024 NCBI chr10:121,478,330...121,598,458
Ensembl chr10:121,478,334...121,598,458
Ensembl chr10:121,478,334...121,598,458
JBrowse link
G RDH10 retinol dehydrogenase 10 IEA Ensembl GO_REF:0000107 NCBI chr 8:73,294,602...73,325,281
Ensembl chr 8:73,294,602...73,325,281
JBrowse link
G SPRY1 sprouty RTK signaling antagonist 1 IEA Ensembl GO_REF:0000107 NCBI chr 4:123,396,795...123,403,760
Ensembl chr 4:123,396,795...123,403,760
JBrowse link
G SPRY2 sprouty RTK signaling antagonist 2 IEA Ensembl GO_REF:0000107 NCBI chr13:80,335,976...80,341,126
Ensembl chr13:80,335,976...80,341,126
JBrowse link
G YAP1 Yes1 associated transcriptional regulator IEA Ensembl GO_REF:0000107 NCBI chr11:102,109,957...102,233,424
Ensembl chr11:102,110,447...102,233,424
JBrowse link
bud outgrowth involved in lung branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGF10 fibroblast growth factor 10 IDA (PMID:9740653) MGI PMID:9740653 NCBI chr 5:44,300,247...44,389,706
Ensembl chr 5:44,300,247...44,389,706
Ensembl chr 5:44,300,247...44,389,706
JBrowse link
G SHH sonic hedgehog signaling molecule IEA Ensembl GO_REF:0000107 NCBI chr 7:155,799,980...155,812,463
Ensembl chr 7:155,799,980...155,812,463
JBrowse link
G TMTC3 transmembrane O-mannosyltransferase targeting cadherins 3 ISO (MGI:MGI:5300435|PMID:21956870) MGI PMID:21956870 MGI:MGI:5300435 NCBI chr12:88,142,307...88,199,887
Ensembl chr12:88,142,296...88,199,887
JBrowse link
G TNC tenascin C IEA Ensembl GO_REF:0000107 NCBI chr 9:115,019,575...115,118,244
Ensembl chr 9:115,019,575...115,118,257
JBrowse link
dichotomous subdivision of terminal units involved in lung branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTSH cathepsin H ISS UniProtKB GO_REF:0000024 NCBI chr15:78,921,058...78,945,089
Ensembl chr15:78,921,058...78,949,574
JBrowse link
dichotomous subdivision of terminal units involved in mammary gland duct morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AREG amphiregulin IEA Ensembl GO_REF:0000107 NCBI chr 4:74,445,136...74,455,005
Ensembl chr 4:74,445,136...74,455,005
JBrowse link
G TFAP2C transcription factor AP-2 gamma ISO (MGI:MGI:4422106|PMID:20131354) MGI PMID:20131354 MGI:MGI:4422106 NCBI chr20:56,629,306...56,639,283
Ensembl chr20:56,629,306...56,639,283
JBrowse link
dichotomous subdivision of terminal units involved in ureteric bud branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXD1 forkhead box D1 ISS UniProtKB GO_REF:0000024 NCBI chr 5:73,446,266...73,448,777
Ensembl chr 5:73,444,827...73,448,777
JBrowse link
epithelial cell proliferation involved in mammary gland duct elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AREG amphiregulin IEA Ensembl GO_REF:0000107 NCBI chr 4:74,445,136...74,455,005
Ensembl chr 4:74,445,136...74,455,005
JBrowse link
G ESR1 estrogen receptor 1 IEA Ensembl GO_REF:0000107 NCBI chr 6:151,654,148...152,129,619
Ensembl chr 6:151,656,691...152,129,619
JBrowse link
G MED1 mediator complex subunit 1 IEA Ensembl GO_REF:0000107 NCBI chr17:39,404,285...39,451,281
Ensembl chr17:39,404,285...39,451,272
JBrowse link
G TFAP2C transcription factor AP-2 gamma ISO (MGI:MGI:4422106|PMID:20131354) MGI PMID:20131354 MGI:MGI:4422106 NCBI chr20:56,629,306...56,639,283
Ensembl chr20:56,629,306...56,639,283
JBrowse link
G WNT5A Wnt family member 5A IEA Ensembl GO_REF:0000107 NCBI chr 3:55,465,715...55,505,261
Ensembl chr 3:55,465,715...55,490,539
JBrowse link
epithelial tube branching involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 IDA (PMID:8674409) MGI PMID:8674409 NCBI chr14:53,949,736...53,956,891
Ensembl chr14:53,949,736...53,958,761
JBrowse link
G CTNNB1 catenin beta 1 IEA Ensembl GO_REF:0000107 NCBI chr 3:41,199,422...41,240,445
Ensembl chr 3:41,194,741...41,260,096
JBrowse link
G CTSD cathepsin D NOT ISO (MGI:MGI:3722010|PMID:17500053) UniProtKB PMID:17500053 MGI:MGI:3722010 NCBI chr11:1,752,755...1,763,927
Ensembl chr11:1,752,755...1,764,573
JBrowse link
G CTSL cathepsin L NOT ISO (MGI:MGI:3722010|PMID:17500053) UniProtKB PMID:17500053 MGI:MGI:3722010 NCBI chr 9:87,726,119...87,731,469
Ensembl chr 9:87,726,109...87,731,469
JBrowse link
G CTSZ cathepsin Z IEA Ensembl GO_REF:0000107 NCBI chr20:58,995,185...59,007,254
Ensembl chr20:58,995,185...59,007,254
JBrowse link
G DAG1 dystroglycan 1 IEA Ensembl GO_REF:0000107 NCBI chr 3:49,468,703...49,535,618
Ensembl chr 3:49,468,703...49,535,618
JBrowse link
G DLG5 discs large MAGUK scaffold protein 5 IEA Ensembl GO_REF:0000107 NCBI chr10:77,790,787...77,926,755
Ensembl chr10:77,790,791...77,926,755
JBrowse link
G ESRP1 epithelial splicing regulatory protein 1 ISO (MGI:MGI:5699497|PMID:26371508) MGI PMID:26371508 MGI:MGI:5699497 NCBI chr 8:94,640,999...94,707,466
Ensembl chr 8:94,641,074...94,707,466
JBrowse link
G ESRP2 epithelial splicing regulatory protein 2 IEA Ensembl GO_REF:0000107 NCBI chr16:68,225,968...68,236,175
Ensembl chr16:68,229,033...68,238,102
JBrowse link
G EXT1 exostosin glycosyltransferase 1 ISO (MGI:MGI:5912649|PMID:28859094) MGI PMID:28859094 MGI:MGI:5912649 NCBI chr 8:117,794,490...118,111,826
Ensembl chr 8:117,794,490...118,111,853
Ensembl chr 8:117,794,490...118,111,853
JBrowse link
G FGF10 fibroblast growth factor 10 ISO (MGI:MGI:1101385|PMID:9428423), (MGI:MGI:3609523|PMID:16169547), (MGI:MGI:3613102|PMID:16375885)
(MGI:MGI:3716020|PMID:17560563)
(MGI:MGI:1309706|PMID:9784490)
(MGI:MGI:3578606|PMID:15800000)
(MGI:MGI:1327513|PMID:9916808)
MGI PMID:9428423, PMID:9784490, PMID:9916808, PMID:15800000, PMID:16169547, PMID:16375885, PMID:17560563 MGI:MGI:1101385, MGI:MGI:1309706, MGI:MGI:1327513, MGI:MGI:3578606, MGI:MGI:3609523, MGI:MGI:3613102, MGI:MGI:3716020 NCBI chr 5:44,300,247...44,389,706
Ensembl chr 5:44,300,247...44,389,706
Ensembl chr 5:44,300,247...44,389,706
JBrowse link
G FGFR2 fibroblast growth factor receptor 2 ISO (MGI:MGI:5523405|PMID:24058167) MGI PMID:24058167 MGI:MGI:5523405 NCBI chr10:121,478,330...121,598,458
Ensembl chr10:121,478,334...121,598,458
Ensembl chr10:121,478,334...121,598,458
JBrowse link
G FOXA1 forkhead box A1 IEA Ensembl GO_REF:0000107 NCBI chr14:37,589,552...37,595,249
Ensembl chr14:37,589,552...37,596,059
JBrowse link
G FOXA2 forkhead box A2 ISO (MGI:MGI:3579763|PMID:15668254) MGI PMID:15668254 MGI:MGI:3579763 NCBI chr20:22,580,998...22,585,490
Ensembl chr20:22,581,005...22,585,455
JBrowse link
G FOXF1 forkhead box F1 IEA Ensembl GO_REF:0000107 NCBI chr16:86,510,527...86,515,422
Ensembl chr16:86,510,527...86,515,422
JBrowse link
G HHIP hedgehog interacting protein IEA Ensembl GO_REF:0000107 NCBI chr 4:144,646,154...144,745,271
Ensembl chr 4:144,646,156...144,745,271
JBrowse link
G HMGA2 high mobility group AT-hook 2 ISO (MGI:MGI:5638831|PMID:24661562) MGI PMID:24661562 MGI:MGI:5638831 NCBI chr12:65,824,460...65,966,291
Ensembl chr12:65,824,460...65,966,291
Ensembl chr12:65,824,460...65,966,291
JBrowse link
G HOXA5 homeobox A5 IEA Ensembl GO_REF:0000107 NCBI chr 7:27,141,052...27,143,681
Ensembl chr 7:27,141,052...27,143,681
JBrowse link
G KRAS KRAS proto-oncogene, GTPase IEA Ensembl GO_REF:0000107 NCBI chr12:25,205,246...25,250,929
Ensembl chr12:25,205,246...25,250,936
JBrowse link
G LAMA1 laminin subunit alpha 1 IEA Ensembl GO_REF:0000107 NCBI chr18:6,941,742...7,117,797
Ensembl chr18:6,941,742...7,117,797
JBrowse link
G NKX2-1 NK2 homeobox 1 IEP (PMID:8675988) UniProtKB PMID:8675988 NCBI chr14:36,516,397...36,520,232
Ensembl chr14:36,516,392...36,521,149
JBrowse link
G RSPO2 R-spondin 2 IEA Ensembl GO_REF:0000107 NCBI chr 8:107,899,316...108,083,680
Ensembl chr 8:107,899,316...108,083,642
JBrowse link
G SHH sonic hedgehog signaling molecule ISO (MGI:MGI:1277744|PMID:9731532), (MGI:MGI:1346236|PMID:10500184) RGD
MGI
PMID:8769111, PMID:9731532, PMID:10500184 MGI:MGI:1277744, MGI:MGI:1346236, RGD:2306315 NCBI chr 7:155,799,980...155,812,463
Ensembl chr 7:155,799,980...155,812,463
JBrowse link
G SOX2 SRY-box transcription factor 2 ISO (MGI:MGI:3795352|PMID:18374910) MGI PMID:18374910 MGI:MGI:3795352 NCBI chr 3:181,711,925...181,714,436
Ensembl chr 3:181,711,925...181,714,436
JBrowse link
G SOX9 SRY-box transcription factor 9 IEA Ensembl GO_REF:0000107 NCBI chr17:72,121,020...72,126,416
Ensembl chr17:72,121,020...72,126,416
JBrowse link
lateral sprouting involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CELSR1 cadherin EGF LAG seven-pass G-type receptor 1 ISS UniProt GO_REF:0000024 NCBI chr22:46,361,174...46,537,620
Ensembl chr22:46,360,834...46,537,620
Ensembl chr22:46,360,834...46,537,620
Ensembl chr22:46,360,834...46,537,620
JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 IEA Ensembl GO_REF:0000107 NCBI chr 1:160,400,564...160,428,674
Ensembl chr 1:160,400,564...160,428,670
JBrowse link
lateral sprouting involved in mammary gland duct morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AR androgen receptor IEA Ensembl GO_REF:0000107 NCBI chr  X:67,544,021...67,730,619
Ensembl chr  X:67,544,021...67,730,619
JBrowse link
G WNT5A Wnt family member 5A IEA Ensembl GO_REF:0000107 NCBI chr 3:55,465,715...55,505,261
Ensembl chr 3:55,465,715...55,490,539
JBrowse link
lung induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTNNB1 catenin beta 1 IEA Ensembl GO_REF:0000107 NCBI chr 3:41,199,422...41,240,445
Ensembl chr 3:41,194,741...41,260,096
JBrowse link
G WNT2 Wnt family member 2 IEA Ensembl GO_REF:0000107 NCBI chr 7:117,275,451...117,323,058
Ensembl chr 7:117,275,451...117,323,152
JBrowse link
G WNT2B Wnt family member 2B IEA Ensembl GO_REF:0000107 NCBI chr 1:112,466,541...112,530,165
Ensembl chr 1:112,466,541...112,530,165
JBrowse link
mammary gland branching involved in pregnancy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CSMD1 CUB and Sushi multiple domains 1 ISO (MGI:MGI:6369467|PMID:31604923) MGI PMID:31604923 MGI:MGI:6369467 NCBI chr 8:2,935,353...4,995,035
Ensembl chr 8:2,935,353...4,994,972
JBrowse link
G ESR1 estrogen receptor 1 IEA Ensembl GO_REF:0000107 NCBI chr 6:151,654,148...152,129,619
Ensembl chr 6:151,656,691...152,129,619
JBrowse link
G MED1 mediator complex subunit 1 IEA Ensembl GO_REF:0000107 NCBI chr17:39,404,285...39,451,281
Ensembl chr17:39,404,285...39,451,272
JBrowse link
G VDR vitamin D receptor IEA Ensembl GO_REF:0000107 NCBI chr12:47,841,537...47,905,022
Ensembl chr12:47,841,537...47,943,048
JBrowse link
mammary gland branching involved in thelarche term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AREG amphiregulin IEA Ensembl GO_REF:0000107 NCBI chr 4:74,445,136...74,455,005
Ensembl chr 4:74,445,136...74,455,005
JBrowse link
G MED1 mediator complex subunit 1 IEA Ensembl GO_REF:0000107 NCBI chr17:39,404,285...39,451,281
Ensembl chr17:39,404,285...39,451,272
JBrowse link
G NCOA3 nuclear receptor coactivator 3 ISO (MGI:MGI:1859522|PMID:11015591) MGI PMID:11015591 MGI:MGI:1859522 NCBI chr20:47,501,887...47,656,872
Ensembl chr20:47,501,887...47,656,877
JBrowse link
G PHB2 prohibitin 2 IEA Ensembl GO_REF:0000107 NCBI chr12:6,965,327...6,970,753
Ensembl chr12:6,965,327...6,970,753
JBrowse link
G TGFB1 transforming growth factor beta 1 IEA Ensembl GO_REF:0000107 NCBI chr19:41,330,323...41,353,922
Ensembl chr19:41,301,587...41,353,922
JBrowse link
G WNT5A Wnt family member 5A IEA Ensembl GO_REF:0000107 NCBI chr 3:55,465,715...55,505,261
Ensembl chr 3:55,465,715...55,490,539
JBrowse link
negative regulation of branch elongation involved in ureteric bud branching by BMP signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 IDA (PMID:10706139), (PMID:17118062) UniProtKB PMID:10706139, PMID:17118062 NCBI chr14:53,949,736...53,956,891
Ensembl chr14:53,949,736...53,958,761
JBrowse link
negative regulation of branching involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TNF tumor necrosis factor IDA (PMID:17350185) UniProtKB PMID:17350185 NCBI chr 6:31,575,565...31,578,336
Ensembl chr 6:31,575,565...31,578,336
JBrowse link
negative regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 IDA (PMID:12141440), (PMID:17118062) UniProtKB PMID:12141440, PMID:17118062 NCBI chr14:53,949,736...53,956,891
Ensembl chr14:53,949,736...53,958,761
JBrowse link
G TACSTD2 tumor associated calcium signal transducer 2 ISS UniProtKB GO_REF:0000024 NCBI chr 1:58,575,433...58,577,252
Ensembl chr 1:58,575,433...58,577,252
JBrowse link
orthogonal dichotomous subdivision of terminal units involved in lung branching morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CELSR1 cadherin EGF LAG seven-pass G-type receptor 1 ISS UniProt GO_REF:0000024 NCBI chr22:46,361,174...46,537,620
Ensembl chr22:46,360,834...46,537,620
Ensembl chr22:46,360,834...46,537,620
Ensembl chr22:46,360,834...46,537,620
JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 IEA Ensembl GO_REF:0000107 NCBI chr 1:160,400,564...160,428,674
Ensembl chr 1:160,400,564...160,428,670
JBrowse link
planar dichotomous subdivision of terminal units involved in lung branching morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CELSR1 cadherin EGF LAG seven-pass G-type receptor 1 ISS UniProt GO_REF:0000024 NCBI chr22:46,361,174...46,537,620
Ensembl chr22:46,360,834...46,537,620
Ensembl chr22:46,360,834...46,537,620
Ensembl chr22:46,360,834...46,537,620
JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 IEA Ensembl GO_REF:0000107 NCBI chr 1:160,400,564...160,428,674
Ensembl chr 1:160,400,564...160,428,670
JBrowse link
positive regulation blood vessel branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase IEA Ensembl GO_REF:0000107 NCBI chr 9:130,713,881...130,887,675
Ensembl chr 9:130,713,016...130,887,675
JBrowse link
G MDK midkine IMP (PMID:19060126) UniProt PMID:19060126 NCBI chr11:46,380,784...46,383,837
Ensembl chr11:46,380,756...46,383,837
JBrowse link
G SIRT6 sirtuin 6 IMP (PMID:23201774) BHF-UCL PMID:23201774 NCBI chr19:4,174,109...4,182,563
Ensembl chr19:4,174,109...4,182,566
JBrowse link
positive regulation of branching involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 ISS UniProtKB GO_REF:0000024 NCBI chr14:53,949,736...53,956,891
Ensembl chr14:53,949,736...53,958,761
JBrowse link
G CTNNB1 catenin beta 1 ISO (MGI:MGI:3801531|PMID:18533146) MGI PMID:18533146 MGI:MGI:3801531 NCBI chr 3:41,199,422...41,240,445
Ensembl chr 3:41,194,741...41,260,096
JBrowse link
G PDGFRA platelet derived growth factor receptor alpha ISO RGD PMID:8879189 RGD:11087558 NCBI chr 4:54,229,127...54,298,245
Ensembl chr 4:54,229,280...54,298,245
JBrowse link
positive regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGT angiotensinogen IDA (PMID:18607644) UniProtKB PMID:18607644 NCBI chr 1:230,702,523...230,745,583
Ensembl chr 1:230,702,523...230,714,122
JBrowse link
G AGTR1 angiotensin II receptor type 1 ISO PMID:17537984 UniProt PMID:17537984 RGD:1643596 NCBI chr 3:148,697,871...148,743,003
Ensembl chr 3:148,697,784...148,743,008
JBrowse link
G AGTR2 angiotensin II receptor type 2 IEA Ensembl GO_REF:0000107 NCBI chr  X:116,170,744...116,174,974
Ensembl chr  X:116,170,744...116,174,974
JBrowse link
G BMP4 bone morphogenetic protein 4 ISO PMID:17537984 UniProt PMID:17537984 RGD:1643596 NCBI chr14:53,949,736...53,956,891
Ensembl chr14:53,949,736...53,958,761
JBrowse link
G GDNF glial cell derived neurotrophic factor IDA
IBA
(PMID:17229286), (PMID:8657307)
(PMID:21873635)
UniProtKB
GO_Central
PMID:8657307, PMID:17229286, PMID:21873635 NCBI chr 5:37,812,677...37,840,044
Ensembl chr 5:37,812,677...37,840,041
JBrowse link
G GREM1 gremlin 1, DAN family BMP antagonist IEA Ensembl GO_REF:0000107 NCBI chr15:32,718,004...32,745,106
Ensembl chr15:32,718,004...32,745,106
JBrowse link
G HOXB7 homeobox B7 IEA Ensembl GO_REF:0000107 NCBI chr17:48,607,232...48,611,017
Ensembl chr17:48,607,232...48,633,572
JBrowse link
G LGR4 leucine rich repeat containing G protein-coupled receptor 4 IEA Ensembl GO_REF:0000107 NCBI chr11:27,365,961...27,472,790
Ensembl chr11:27,365,961...27,472,790
JBrowse link
G LHX1 LIM homeobox 1 ISS UniProtKB GO_REF:0000024 NCBI chr17:36,937,475...36,944,612
Ensembl chr17:36,936,785...36,944,612
JBrowse link
G MAGED1 MAGE family member D1 IEA Ensembl GO_REF:0000107 NCBI chr  X:51,802,998...51,902,354
Ensembl chr  X:51,803,007...51,902,357
Ensembl chr  X:51,803,007...51,902,357
JBrowse link
G NOG noggin ISS UniProtKB GO_REF:0000024 NCBI chr17:56,593,699...56,595,611
Ensembl chr17:56,593,699...56,595,611
Ensembl chr17:56,593,699...56,595,611
JBrowse link
G PAX2 paired box 2 ISS UniProtKB GO_REF:0000024 NCBI chr10:100,735,396...100,829,944
Ensembl chr10:100,735,603...100,829,941
Ensembl chr10:100,735,603...100,829,941
JBrowse link
G PAX8 paired box 8 ISS UniProtKB GO_REF:0000024 NCBI chr 2:113,215,997...113,278,921
Ensembl chr 2:113,215,997...113,278,921
JBrowse link
G SALL1 spalt like transcription factor 1 ISO (MGI:MGI:5563280|PMID:24550112) MGI PMID:24550112 MGI:MGI:5563280 NCBI chr16:51,135,982...51,151,270
Ensembl chr16:51,135,975...51,151,367
JBrowse link
G SIX1 SIX homeobox 1 ISS UniProtKB GO_REF:0000024 NCBI chr14:60,643,421...60,649,489
Ensembl chr14:60,643,421...60,658,259
JBrowse link
G SIX4 SIX homeobox 4 ISS UniProtKB GO_REF:0000024 NCBI chr14:60,709,539...60,724,351
Ensembl chr14:60,709,539...60,724,351
JBrowse link
G SMO smoothened, frizzled class receptor ISS UniProtKB GO_REF:0000024 NCBI chr 7:129,188,633...129,213,548
Ensembl chr 7:129,188,633...129,213,545
JBrowse link
G SOX8 SRY-box transcription factor 8 ISS UniProtKB GO_REF:0000024 NCBI chr16:981,770...986,979
Ensembl chr16:981,770...986,979
JBrowse link
G SOX9 SRY-box transcription factor 9 ISS UniProtKB GO_REF:0000024 NCBI chr17:72,121,020...72,126,416
Ensembl chr17:72,121,020...72,126,416
JBrowse link
G TGFB1 transforming growth factor beta 1 IEA Ensembl GO_REF:0000107 NCBI chr19:41,330,323...41,353,922
Ensembl chr19:41,301,587...41,353,922
JBrowse link
G VEGFA vascular endothelial growth factor A ISS BHF-UCL GO_REF:0000024 NCBI chr 6:43,770,209...43,786,487
Ensembl chr 6:43,770,184...43,786,487
JBrowse link
G WNT2B Wnt family member 2B IEA Ensembl GO_REF:0000107 NCBI chr 1:112,466,541...112,530,165
Ensembl chr 1:112,466,541...112,530,165
JBrowse link
primary lung bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HHEX hematopoietically expressed homeobox ISO (MGI:MGI:3703395|PMID:16364283) MGI PMID:16364283 MGI:MGI:3703395 NCBI chr10:92,689,955...92,695,647
Ensembl chr10:92,689,955...92,695,647
JBrowse link
G RDH10 retinol dehydrogenase 10 IEA Ensembl GO_REF:0000107 NCBI chr 8:73,294,602...73,325,281
Ensembl chr 8:73,294,602...73,325,281
JBrowse link
regulation of blood vessel branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FKBPL FKBP prolyl isomerase like IEA Ensembl GO_REF:0000107 NCBI chr 6:32,128,707...32,130,288
Ensembl chr 6:32,128,707...32,130,288
JBrowse link
regulation of branch elongation involved in ureteric bud branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HNF1B HNF1 homeobox B IEA Ensembl GO_REF:0000107 NCBI chr17:37,686,431...37,745,059
Ensembl chr17:37,686,431...37,745,105
JBrowse link
G SIX1 SIX homeobox 1 ISS UniProtKB GO_REF:0000024 NCBI chr14:60,643,421...60,649,489
Ensembl chr14:60,643,421...60,658,259
JBrowse link
G SIX4 SIX homeobox 4 ISS UniProtKB GO_REF:0000024 NCBI chr14:60,709,539...60,724,351
Ensembl chr14:60,709,539...60,724,351
JBrowse link
regulation of branching involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SOX9 SRY-box transcription factor 9 IEA Ensembl GO_REF:0000107 NCBI chr17:72,121,020...72,126,416
Ensembl chr17:72,121,020...72,126,416
JBrowse link
regulation of branching involved in mammary gland duct morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAV3 caveolin 3 IEA Ensembl GO_REF:0000107 NCBI chr 3:8,733,802...8,746,758
Ensembl chr 3:8,733,802...8,841,808
Ensembl chr 3:8,733,802...8,841,808
JBrowse link
G ETV5 ETS variant transcription factor 5 IEA Ensembl GO_REF:0000107 NCBI chr 3:186,046,314...186,109,089
Ensembl chr 3:186,046,314...186,110,318
JBrowse link
G PHB2 prohibitin 2 IEA Ensembl GO_REF:0000107 NCBI chr12:6,965,327...6,970,753
Ensembl chr12:6,965,327...6,970,753
JBrowse link
G TGFB1 transforming growth factor beta 1 IEA Ensembl GO_REF:0000107 NCBI chr19:41,330,323...41,353,922
Ensembl chr19:41,301,587...41,353,922
JBrowse link
G WNT5A Wnt family member 5A IEA Ensembl GO_REF:0000107 NCBI chr 3:55,465,715...55,505,261
Ensembl chr 3:55,465,715...55,490,539
JBrowse link
regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SIX2 SIX homeobox 2 ISS UniProtKB GO_REF:0000024 NCBI chr 2:45,005,182...45,009,645
Ensembl chr 2:45,005,182...45,009,452
JBrowse link
tertiary branching involved in mammary gland duct morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AR androgen receptor IEA Ensembl GO_REF:0000107 NCBI chr  X:67,544,021...67,730,619
Ensembl chr  X:67,544,021...67,730,619
JBrowse link
G PGR progesterone receptor IEA Ensembl GO_REF:0000107 NCBI chr11:101,029,624...101,130,681
Ensembl chr11:101,029,624...101,129,813
JBrowse link
G WNT4 Wnt family member 4 IEA Ensembl GO_REF:0000107 NCBI chr 1:22,117,308...22,143,981
Ensembl chr 1:22,117,313...22,143,969
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18650
    developmental process 7452
      anatomical structure morphogenesis 3088
        tube morphogenesis 979
          branching morphogenesis of an epithelial tube 189
            branching involved in blood vessel morphogenesis + 41
            branching involved in lymph vessel morphogenesis 1
            branching involved in mammary gland duct morphogenesis + 30
            branching involved in open tracheal system development + 0
            branching involved in ureteric bud morphogenesis + 66
            epithelial tube branching involved in lung morphogenesis + 39
            tube fusion + 0
Path 2
Term Annotations click to browse term
  biological_process 18650
    developmental process 7452
      anatomical structure development 6856
        tissue development 2416
          epithelium development 1525
            morphogenesis of an epithelium 659
              epithelial tube morphogenesis 406
                branching morphogenesis of an epithelial tube 189
                  branching involved in blood vessel morphogenesis + 41
                  branching involved in lymph vessel morphogenesis 1
                  branching involved in mammary gland duct morphogenesis + 30
                  branching involved in open tracheal system development + 0
                  branching involved in ureteric bud morphogenesis + 66
                  epithelial tube branching involved in lung morphogenesis + 39
                  tube fusion + 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.