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ONTOLOGY REPORT - ANNOTATIONS


Term:branching morphogenesis of an epithelial tube
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Accession:GO:0048754 term browser browse the term
Definition:The process in which the anatomical structures of branches in an epithelial tube are generated and organized. A tube is a long hollow cylinder.
Synonyms:related_synonym: tubulogenesis


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branching morphogenesis of an epithelial tube term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4GALT1 beta-1,4-galactosyltransferase 1 ISO (MGI:MGI:3052392|PMID:15282149)
(MGI:MGI:2178150|PMID:11900463)
MGI PMID:11900463, PMID:15282149 MGI:MGI:2178150, MGI:MGI:3052392 NCBI chr10:33,317,295...33,381,285
Ensembl chr10:33,317,305...33,381,289
JBrowse link
G BMP4 bone morphogenetic protein 4 ISO (PMID:10706139) UniProtKB PMID:10706139 NCBI chr 1:183,415,989...183,422,888
Ensembl chr 1:183,416,134...183,792,417
JBrowse link
G BMP7 bone morphogenetic protein 7 IEA Ensembl GO_REF:0000107 NCBI chr17:57,567,770...57,676,516
Ensembl chr17:57,584,091...57,676,944
JBrowse link
G CASR calcium sensing receptor ISO positive regulation RGD PMID:20117086 RGD:7206840 NCBI chr13:138,279,785...138,364,934
Ensembl chr13:138,280,363...138,364,253
JBrowse link
G CLIC4 chloride intracellular channel 4 IEA Ensembl GO_REF:0000107 NCBI chr 6:82,401,041...82,483,038
Ensembl chr 6:82,401,188...82,483,724
JBrowse link
G DICER1 dicer 1, ribonuclease III ISO (MGI:MGI:3617296|PMID:16452165) MGI PMID:16452165 MGI:MGI:3617296 NCBI chr 7:116,361,630...116,436,471
Ensembl chr 7:116,361,630...116,436,519
JBrowse link
G EGF epidermal growth factor IEA Ensembl GO_REF:0000107 NCBI chr 8:112,235,607...112,330,062
Ensembl chr 8:112,234,365...112,330,046
JBrowse link
G FGF10 fibroblast growth factor 10 ISO (PMID:17959718) UniProtKB PMID:17959718 NCBI chr16:28,695,465...28,779,953
Ensembl chr16:28,695,469...28,777,541
JBrowse link
G GDF7 growth differentiation factor 7 IEA Ensembl GO_REF:0000107 NCBI chr 3:117,586,188...117,592,541
Ensembl chr 3:117,588,431...117,592,466
JBrowse link
G GLI2 GLI family zinc finger 2 IEA Ensembl GO_REF:0000107 NCBI chr15:30,312,528...30,580,272
Ensembl chr15:30,313,817...30,579,306
JBrowse link
G GLI3 GLI family zinc finger 3 ISO (MGI:MGI:3608164|PMID:16247775) MGI PMID:16247775 MGI:MGI:3608164 NCBI chr18:52,403,463...52,697,906
Ensembl chr18:52,404,071...52,697,903
JBrowse link
G HNF1B HNF1 homeobox B IEA Ensembl GO_REF:0000107 NCBI chr12:39,143,119...39,201,631
Ensembl chr12:39,143,121...39,313,511
JBrowse link
G IGF1 insulin like growth factor 1 ISO (MGI:MGI:3616136|PMID:15059953) MGI PMID:15059953 MGI:MGI:3616136 NCBI chr 5:81,762,027...81,909,253
Ensembl chr 5:81,775,970...81,848,037
JBrowse link
G KDR kinase insert domain receptor ISO (MGI:MGI:3613102|PMID:16375885) MGI PMID:16375885 MGI:MGI:3613102 NCBI chr 8:41,809,116...41,856,379
Ensembl chr 8:41,809,116...41,856,339
JBrowse link
G LAMA5 laminin subunit alpha 5 ISO (MGI:MGI:2678847|PMID:14568553) MGI PMID:14568553 MGI:MGI:2678847 NCBI chr17:61,698,370...61,747,795 JBrowse link
G MET MET proto-oncogene, receptor tyrosine kinase IEA Ensembl GO_REF:0000107 NCBI chr18:29,426,044...29,541,526
Ensembl chr18:29,426,044...29,541,512
JBrowse link
G MGP matrix Gla protein ISO fetal lung RGD PMID:15136295 RGD:1582506 NCBI chr 5:57,665,272...57,669,360
Ensembl chr 5:57,665,248...57,669,764
JBrowse link
G MKS1 MKS transition zone complex subunit 1 IEA Ensembl GO_REF:0000107 NCBI chr12:34,499,139...34,512,191
Ensembl chr12:34,499,141...34,512,187
JBrowse link
G MMP14 matrix metallopeptidase 14 ISS
IEA
AgBase
Ensembl
GO_REF:0000024, GO_REF:0000107 NCBI chr 7:76,174,502...76,185,931
Ensembl chr 7:76,174,500...76,185,923
JBrowse link
G MYCN MYCN proto-oncogene, bHLH transcription factor ISO (MGI:MGI:3574742|PMID:15716345) MGI PMID:15716345 MGI:MGI:3574742 NCBI chr 3:121,543,201...121,549,678
Ensembl chr 3:121,542,275...121,549,491
JBrowse link
G NKX3-1 NK3 homeobox 1 IEA Ensembl GO_REF:0000107 NCBI chr14:7,783,296...7,787,036
Ensembl chr14:7,782,421...7,787,034
JBrowse link
G NOTCH1 notch receptor 1 IEA Ensembl GO_REF:0000107
G PAK1 p21 (RAC1) activated kinase 1 ISS
IEA
UniProt
Ensembl
GO_REF:0000024, GO_REF:0000107 NCBI chr 9:11,830,095...11,973,074
Ensembl chr 9:11,830,093...12,113,670
JBrowse link
G PKD1 polycystin 1, transient receptor potential channel interacting IEA Ensembl GO_REF:0000107 NCBI chr 3:39,849,579...39,899,455
Ensembl chr 3:39,849,609...39,899,455
JBrowse link
G PPP1CA protein phosphatase 1 catalytic subunit alpha IEA Ensembl GO_REF:0000107 NCBI chr 2:5,120,202...5,123,168
Ensembl chr 2:5,120,140...5,126,953
JBrowse link
G PXN paxillin ISO (MGI:MGI:2680875|PMID:14636584) MGI PMID:14636584 MGI:MGI:2680875 NCBI chr14:40,227,894...40,278,785
Ensembl chr14:40,227,894...40,278,766
JBrowse link
G RASIP1 Ras interacting protein 1 IEA Ensembl GO_REF:0000107 NCBI chr 6:54,058,748...54,072,415
Ensembl chr 6:54,058,759...54,076,473
JBrowse link
G SEMA5A semaphorin 5A ISO (MGI:MGI:3575993|PMID:15743826) MGI PMID:15743826 MGI:MGI:3575993 NCBI chr16:72,796,453...73,335,974
Ensembl chr16:72,492,516...73,329,010
JBrowse link
G SHH sonic hedgehog signaling molecule ISO (MGI:MGI:3050270|PMID:15305287)
(MGI:MGI:1289788|PMID:9768363)
(MGI:MGI:3039063|PMID:15042696)
MGI PMID:9768363, PMID:15042696, PMID:15305287 MGI:MGI:1289788, MGI:MGI:3039063, MGI:MGI:3050270 NCBI chr18:2,546,202...2,555,484
Ensembl chr18:2,545,718...2,555,484
JBrowse link
G SLIT2 slit guidance ligand 2 IEA Ensembl GO_REF:0000107 NCBI chr 8:14,758,426...15,149,515
Ensembl chr 8:14,756,619...15,149,510
JBrowse link
G SPRY2 sprouty RTK signaling antagonist 2 ISO (MGI:MGI:1331548|PMID:10074434) MGI PMID:10074434 MGI:MGI:1331548 NCBI chr11:52,153,695...52,158,766
Ensembl chr11:52,153,704...52,160,497
JBrowse link
G TIMELESS timeless circadian regulator IEA Ensembl GO_REF:0000107 Ensembl chr 5:21,759,474...21,787,521 JBrowse link
G TMEM67 transmembrane protein 67 ISO (MGI:MGI:4441259|PMID:17185389) UniProtKB PMID:17185389 MGI:MGI:4441259 NCBI chr 4:42,878,249...42,931,106
Ensembl chr 4:42,878,254...42,931,121
JBrowse link
G VEGFA vascular endothelial growth factor A ISO (MGI:MGI:3613102|PMID:16375885) MGI PMID:16375885 MGI:MGI:3613102 NCBI chr 7:38,746,393...38,762,282
Ensembl chr 7:38,746,052...38,761,038
JBrowse link
G WNT4 Wnt family member 4 ISO (MGI:MGI:2178881|PMID:11948913) MGI PMID:11948913 MGI:MGI:2178881 NCBI chr 6:80,110,238...80,138,165 JBrowse link
G WNT9B Wnt family member 9B ISO (MGI:MGI:3588895|PMID:16054034) MGI PMID:16054034 MGI:MGI:3588895 NCBI chr12:17,709,046...17,733,434
Ensembl chr12:17,709,049...17,733,438
JBrowse link
branch elongation involved in mammary gland duct branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TGFB1 transforming growth factor beta 1 IEA Ensembl GO_REF:0000107 NCBI chr 6:49,332,169...49,348,642
Ensembl chr 6:49,332,169...49,349,048
JBrowse link
branch elongation involved in ureteric bud branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGF1 fibroblast growth factor 1 ISS
IEA
UniProt
Ensembl
GO_REF:0000024, GO_REF:0000107 NCBI chr 2:144,133,846...144,241,345
Ensembl chr 2:144,133,390...144,241,323
JBrowse link
branching involved in blood vessel morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACVR1 activin A receptor type 1 IEA Ensembl GO_REF:0000107 NCBI chr15:64,749,478...64,891,653
Ensembl chr15:64,748,761...64,892,153
JBrowse link
G AHR aryl hydrocarbon receptor ISO (MGI:MGI:1889403|PMID:10973493) DFLAT PMID:10973493 MGI:MGI:1889403 NCBI chr 9:86,511,866...86,555,950
Ensembl chr 9:86,511,369...86,555,943
JBrowse link
G COL4A1 collagen type IV alpha 1 chain ISO (PMID:20818663) BHF-UCL PMID:20818663 NCBI chr11:76,858,332...76,997,409 JBrowse link
G CTNNB1 catenin beta 1 IEA Ensembl GO_REF:0000107 NCBI chr13:25,163,550...25,208,314
Ensembl chr13:25,137,173...25,208,311
JBrowse link
G CXCL12 C-X-C motif chemokine ligand 12 ISO (MGI:MGI:3578491|PMID:15626744) MGI PMID:15626744 MGI:MGI:3578491 NCBI chr14:91,516,383...91,543,857
Ensembl chr14:91,516,429...91,552,766
JBrowse link
G CXCR4 C-X-C motif chemokine receptor 4 ISO (MGI:MGI:3578491|PMID:15626744) MGI PMID:15626744 MGI:MGI:3578491 NCBI chr15:15,663,652...15,666,706
Ensembl chr15:15,663,494...15,667,233
JBrowse link
G DLL4 delta like canonical Notch ligand 4 IEA Ensembl GO_REF:0000107 NCBI chr 1:130,376,720...130,386,411
Ensembl chr 1:130,376,720...130,386,713
JBrowse link
G EDN1 endothelin 1 IEA Ensembl GO_REF:0000107 NCBI chr 7:8,752,018...8,758,354
Ensembl chr 7:8,751,695...8,758,348
JBrowse link
G EDNRA endothelin receptor type A IEA Ensembl GO_REF:0000107 NCBI chr 8:81,210,750...81,279,053
Ensembl chr 8:81,209,327...81,276,853
JBrowse link
G ENG endoglin IEA Ensembl GO_REF:0000107 NCBI chr 1:268,309,379...268,343,861
Ensembl chr 1:268,306,120...268,343,827
JBrowse link
G FGF8 fibroblast growth factor 8 IEA Ensembl GO_REF:0000107 NCBI chr14:112,808,215...112,814,225
Ensembl chr14:112,808,210...112,814,134
JBrowse link
G FLT1 fms related receptor tyrosine kinase 1 ISO (MGI:MGI:3045573|PMID:14982871) MGI PMID:14982871 MGI:MGI:3045573 NCBI chr11:5,620,698...5,797,095
Ensembl chr11:5,620,700...5,795,264
JBrowse link
G FOXC2 forkhead box C2 IEA Ensembl GO_REF:0000107 NCBI chr 6:2,552,141...2,555,041
Ensembl chr 6:2,552,862...2,554,367
JBrowse link
G GBX2 gastrulation brain homeobox 2 IEA Ensembl GO_REF:0000107 NCBI chr15:136,029,393...136,032,568
Ensembl chr15:136,028,865...136,032,117
JBrowse link
G GDF2 growth differentiation factor 2 IEA Ensembl GO_REF:0000107 NCBI chr14:88,506,083...88,513,416
Ensembl chr14:88,507,397...88,513,376
JBrowse link
G GNA13 G protein subunit alpha 13 IEA Ensembl GO_REF:0000107 NCBI chr12:11,922,630...11,966,913
Ensembl chr12:11,922,632...11,966,610
JBrowse link
G IHH Indian hedgehog signaling molecule IEA Ensembl GO_REF:0000107 NCBI chr15:121,083,750...121,090,548
Ensembl chr15:121,083,753...121,090,121
JBrowse link
G KDR kinase insert domain receptor IEA Ensembl GO_REF:0000107 NCBI chr 8:41,809,116...41,856,379
Ensembl chr 8:41,809,116...41,856,339
JBrowse link
G LEF1 lymphoid enhancer binding factor 1 IEA Ensembl GO_REF:0000107 NCBI chr 8:113,824,511...113,944,078
Ensembl chr 8:113,824,547...113,944,078
JBrowse link
G NFATC3 nuclear factor of activated T cells 3 ISO (MGI:MGI:2136698|PMID:11439183) MGI PMID:11439183 MGI:MGI:2136698 NCBI chr 6:28,666,458...28,806,432
Ensembl chr 6:28,617,445...28,872,058
JBrowse link
G NFATC4 nuclear factor of activated T cells 4 IEA Ensembl GO_REF:0000107 NCBI chr 7:74,918,982...74,929,688
Ensembl chr 7:74,918,982...74,931,348
JBrowse link
G NOTCH4 notch receptor 4 ISO (MGI:MGI:1934537|PMID:11344305) UniProtKB PMID:11344305 MGI:MGI:1934537 NCBI chr 7:24,231,293...24,256,281
Ensembl chr 7:24,231,293...24,256,281
JBrowse link
G NRARP NOTCH regulated ankyrin repeat protein IBA (PMID:21873635) GO_Central PMID:21873635
G NRP1 neuropilin 1 IEA Ensembl GO_REF:0000107 NCBI chr10:56,280,673...56,430,832
Ensembl chr10:56,280,363...56,430,777
JBrowse link
G PITX2 paired like homeodomain 2 ISO (MGI:MGI:2389284|PMID:12397115) MGI PMID:12397115 MGI:MGI:2389284 NCBI chr 8:111,697,364...111,723,295
Ensembl chr 8:111,698,664...111,723,298
JBrowse link
G PLXND1 plexin D1 IEA Ensembl GO_REF:0000107 NCBI chr13:68,946,658...68,996,625
Ensembl chr13:68,946,661...68,996,618
JBrowse link
G PPP3R1 protein phosphatase 3 regulatory subunit B, alpha IEA Ensembl GO_REF:0000107 NCBI chr 3:74,004,620...74,068,173 JBrowse link
G RBM15 RNA binding motif protein 15 IEA Ensembl GO_REF:0000107 NCBI chr 4:109,767,464...109,791,555
Ensembl chr 4:109,769,869...109,786,235
JBrowse link
G SEMA3E semaphorin 3E IEA Ensembl GO_REF:0000107 NCBI chr 9:96,682,178...96,941,074
Ensembl chr 9:96,682,246...96,941,074
JBrowse link
G SEMA5A semaphorin 5A ISO (MGI:MGI:3575993|PMID:15743826) MGI PMID:15743826 MGI:MGI:3575993 NCBI chr16:72,796,453...73,335,974
Ensembl chr16:72,492,516...73,329,010
JBrowse link
G SFRP2 secreted frizzled related protein 2 IEA Ensembl GO_REF:0000107 NCBI chr 8:75,337,311...75,345,926
Ensembl chr 8:75,337,133...75,345,926
JBrowse link
G SHH sonic hedgehog signaling molecule IEA Ensembl GO_REF:0000107 NCBI chr18:2,546,202...2,555,484
Ensembl chr18:2,545,718...2,555,484
JBrowse link
G SRF serum response factor IEA Ensembl GO_REF:0000107 NCBI chr 7:38,213,300...38,223,686
Ensembl chr 7:38,213,063...38,222,140
JBrowse link
G STK4 serine/threonine kinase 4 IEA Ensembl GO_REF:0000107 NCBI chr17:47,387,594...47,475,705
Ensembl chr17:47,376,115...47,475,718
JBrowse link
G TBX20 T-box transcription factor 20 IEA Ensembl GO_REF:0000107 NCBI chr18:38,635,603...38,681,690
Ensembl chr18:38,635,617...38,677,208
JBrowse link
G TGFBR2 transforming growth factor beta receptor 2 IEA Ensembl GO_REF:0000107 NCBI chr13:16,784,370...16,875,828
Ensembl chr13:16,784,491...16,878,165
JBrowse link
G VEGFA vascular endothelial growth factor A ISO (PMID:23083510), (PMID:23688497)
(MGI:MGI:3710026|PMID:17428830)
BHF-UCL
MGI
PMID:17428830, PMID:23083510, PMID:23688497 MGI:MGI:3710026 NCBI chr 7:38,746,393...38,762,282
Ensembl chr 7:38,746,052...38,761,038
JBrowse link
branching involved in lymph vessel morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NFATC1 nuclear factor of activated T cells 1 ISO (MGI:MGI:3848105|PMID:19233265) MGI PMID:19233265 MGI:MGI:3848105 NCBI chr 1:145,940,099...146,002,897
Ensembl chr 1:145,911,045...146,017,701
JBrowse link
branching involved in mammary gland duct morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BTRC beta-transducin repeat containing E3 ubiquitin protein ligase IEA Ensembl GO_REF:0000107 NCBI chr14:112,398,764...112,588,041
Ensembl chr14:112,398,866...112,588,041
JBrowse link
G CCL11 chemokine (C-C motif) ligand 11 IEA Ensembl GO_REF:0000107 NCBI chr12:40,779,906...40,782,862
Ensembl chr12:40,779,173...40,782,893
JBrowse link
G CSF1 colony stimulating factor 1 IEA Ensembl GO_REF:0000107 NCBI chr 4:110,178,466...110,198,232
Ensembl chr 4:110,178,478...110,197,901
JBrowse link
G DDR1 discoidin domain receptor tyrosine kinase 1 IEA Ensembl GO_REF:0000107 NCBI chr 7:23,371,358...23,391,585
Ensembl chr 7:23,373,808...23,394,965
JBrowse link
G EPHA2 EPH receptor A2 IEA Ensembl GO_REF:0000107 NCBI chr 6:75,251,465...75,279,364
Ensembl chr 6:75,251,467...75,279,314
JBrowse link
G ETV4 ETS variant transcription factor 4 ISO (MGI:MGI:2667785|PMID:12871699)
(MGI:MGI:3828920|PMID:18977342)
MGI PMID:12871699, PMID:18977342 MGI:MGI:2667785, MGI:MGI:3828920 NCBI chr12:19,531,507...19,548,303
Ensembl chr12:19,531,505...19,548,303
JBrowse link
G KDM5B lysine demethylase 5B IEA Ensembl GO_REF:0000107 NCBI chr10:24,739,115...24,831,537
Ensembl chr10:24,736,834...24,831,447
JBrowse link
G LRP5 LDL receptor related protein 5 IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr 2:4,533,721...4,653,997
Ensembl chr 2:4,533,593...4,653,945
JBrowse link
G LRP6 LDL receptor related protein 6 ISO (MGI:MGI:3849913|PMID:19503830) MGI PMID:19503830 MGI:MGI:3849913 NCBI chr 5:60,149,041...60,318,719
Ensembl chr 5:60,149,028...60,314,689
JBrowse link
G MSX2 msh homeobox 2 IEA Ensembl GO_REF:0000107 NCBI chr16:49,765,587...49,771,745
Ensembl chr16:49,766,897...49,771,634
JBrowse link
G PML PML nuclear body scaffold IEA Ensembl GO_REF:0000107 NCBI chr 7:59,405,044...59,450,155
Ensembl chr 7:59,405,048...59,450,150
JBrowse link
G SLC12A2 solute carrier family 12 member 2 ISO (MGI:MGI:2180693|PMID:8864124) MGI PMID:8864124 MGI:MGI:2180693 NCBI chr 2:131,016,430...131,109,307
Ensembl chr 2:131,016,430...131,109,305
JBrowse link
G SRC SRC proto-oncogene, non-receptor tyrosine kinase IEA Ensembl GO_REF:0000107 NCBI chr17:40,470,970...40,524,862
Ensembl chr17:40,471,009...40,524,860
JBrowse link
G TBX3 T-box transcription factor 3 IEA Ensembl GO_REF:0000107 NCBI chr14:37,582,704...37,596,767
Ensembl chr14:37,582,822...37,596,767
JBrowse link
branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAMTS16 ADAM metallopeptidase with thrombospondin type 1 motif 16 IEA Ensembl GO_REF:0000107 NCBI chr16:76,326,718...76,491,050
Ensembl chr16:76,326,719...76,490,894
JBrowse link
G AGT angiotensinogen NOT ISO (MGI:MGI:2655949|PMID:12657564)
(MGI:MGI:77583|PMID:8675666)
MGI PMID:8675666, PMID:12657564 MGI:MGI:2655949, MGI:MGI:77583 NCBI chr14:59,643,030...59,656,835
Ensembl chr14:59,643,292...59,672,428
JBrowse link
G BCL2 BCL2 apoptosis regulator ISO (MGI:MGI:3036971|PMID:14699151)
(MGI:MGI:3768986|PMID:16672320)
MGI PMID:14699151, PMID:16672320 MGI:MGI:3036971, MGI:MGI:3768986 NCBI chr 1:158,337,403...158,518,214
Ensembl chr 1:158,288,544...158,518,879
JBrowse link
G BMP2 bone morphogenetic protein 2 IEA Ensembl GO_REF:0000107 NCBI chr17:15,750,487...15,762,982
Ensembl chr17:15,749,835...15,761,215
JBrowse link
G BMP4 bone morphogenetic protein 4 IEA Ensembl GO_REF:0000107 NCBI chr 1:183,415,989...183,422,888
Ensembl chr 1:183,416,134...183,792,417
JBrowse link
G CD44 CD44 molecule ISO (MGI:MGI:2449954|PMID:10926769) MGI PMID:10926769 MGI:MGI:2449954 NCBI chr 2:25,788,699...25,884,209
Ensembl chr 2:25,788,704...25,884,153
JBrowse link
G CITED1 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1 NOT ISO (MGI:MGI:3717986|PMID:17615577)
PMID:15843474
UniProtKB
UniProt
PMID:15843474, PMID:17615577 MGI:MGI:3717986, RGD:8554075 NCBI chr  X:58,179,084...58,184,778
Ensembl chr  X:58,179,087...58,184,499
JBrowse link
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 NOT ISO (MGI:MGI:3717986|PMID:17615577) UniProtKB PMID:17615577 MGI:MGI:3717986 NCBI chr 1:25,155,652...25,158,517
Ensembl chr 1:25,155,664...25,160,279
JBrowse link
G CTNNB1 catenin beta 1 IEA Ensembl GO_REF:0000107 NCBI chr13:25,163,550...25,208,314
Ensembl chr13:25,137,173...25,208,311
JBrowse link
G CTNNBIP1 catenin beta interacting protein 1 IEA Ensembl GO_REF:0000107 NCBI chr 6:70,184,935...70,241,560
Ensembl chr 6:70,184,933...70,241,429
JBrowse link
G DCHS1 dachsous cadherin-related 1 IEA Ensembl GO_REF:0000107 NCBI chr 9:3,099,525...3,134,825
Ensembl chr 9:3,113,451...3,134,821
JBrowse link
G DLG1 discs large MAGUK scaffold protein 1 IEA Ensembl GO_REF:0000107 NCBI chr13:132,819,931...133,084,880
Ensembl chr13:132,820,870...133,086,843
JBrowse link
G DSPP dentin sialophosphoprotein ISO (MGI:MGI:3686561|PMID:16937369) MGI PMID:16937369 MGI:MGI:3686561 NCBI chr 8:131,318,187...131,444,274
Ensembl chr 8:131,319,983...131,472,761
JBrowse link
G EYA1 EYA transcriptional coactivator and phosphatase 1 IEA Ensembl GO_REF:0000107 NCBI chr 4:63,970,939...64,328,107
Ensembl chr 4:63,970,511...64,328,105
JBrowse link
G FAT4 FAT atypical cadherin 4 ISO (MGI:MGI:4939936|PMID:21303848) MGI PMID:21303848 MGI:MGI:4939936 NCBI chr 8:99,141,967...99,312,131 JBrowse link
G FGF2 fibroblast growth factor 2 ISO (PMID:12631064) UniProtKB PMID:12631064 NCBI chr 8:101,278,877...101,344,084
Ensembl chr 8:101,278,878...101,343,916
JBrowse link
G FGF8 fibroblast growth factor 8 IEA Ensembl GO_REF:0000107 NCBI chr14:112,808,215...112,814,225
Ensembl chr14:112,808,210...112,814,134
JBrowse link
G FOXD1 forkhead box D1 ISO (MGI:MGI:2675756|PMID:13678594) MGI PMID:13678594 MGI:MGI:2675756 NCBI chr 2:82,607,113...82,612,005
Ensembl chr 2:82,607,848...82,609,248
JBrowse link
G GDNF glial cell derived neurotrophic factor IEA Ensembl GO_REF:0000107 NCBI chr16:22,936,602...22,965,929
Ensembl chr16:22,936,601...22,965,886
JBrowse link
G GLI3 GLI family zinc finger 3 IEA Ensembl GO_REF:0000107 NCBI chr18:52,403,463...52,697,906
Ensembl chr18:52,404,071...52,697,903
JBrowse link
G GPC3 glypican 3 IEA Ensembl GO_REF:0000107 NCBI chr  X:109,536,495...109,973,605
Ensembl chr  X:109,536,495...109,973,607
JBrowse link
G GREB1L GREB1 like retinoic acid receptor coactivator IEA Ensembl GO_REF:0000107 NCBI chr 6:106,545,882...106,693,711
Ensembl chr 6:106,419,943...106,691,646
JBrowse link
G GZF1 GDNF inducible zinc finger protein 1 ISO (MGI:MGI:2683817|PMID:14522971) MGI PMID:14522971 MGI:MGI:2683817 NCBI chr17:30,351,433...30,360,245 JBrowse link
G HOXA11 homeobox A11 IEA Ensembl GO_REF:0000107 NCBI chr18:45,388,523...45,392,190
Ensembl chr18:45,388,574...45,392,573
JBrowse link
G HOXD11 homeobox D11 ISO (MGI:MGI:2135652|PMID:11493536) MGI PMID:11493536 MGI:MGI:2135652 NCBI chr15:81,906,654...81,910,765
Ensembl chr15:81,908,460...81,910,281
JBrowse link
G ILK integrin linked kinase IEA Ensembl GO_REF:0000107 NCBI chr 9:3,145,647...3,152,097
Ensembl chr 9:3,145,647...3,159,858
JBrowse link
G LAMA5 laminin subunit alpha 5 ISO (MGI:MGI:2678847|PMID:14568553) MGI PMID:14568553 MGI:MGI:2678847 NCBI chr17:61,698,370...61,747,795 JBrowse link
G LHX1 LIM homeobox 1 IEA Ensembl GO_REF:0000107 NCBI chr12:38,450,708...38,457,583
Ensembl chr12:38,450,708...38,456,139
JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor ISO (MGI:MGI:3830398|PMID:19161241) UniProtKB PMID:19161241 MGI:MGI:3830398 NCBI chr 4:12,455,141...12,460,360
Ensembl chr 4:12,455,119...12,461,078
JBrowse link
G NPNT nephronectin IEA Ensembl GO_REF:0000107 NCBI chr 8:115,768,963...115,861,170
Ensembl chr 8:115,779,839...115,861,463
JBrowse link
G PAX2 paired box 2 IEA Ensembl GO_REF:0000107 NCBI chr14:111,822,334...111,914,950
Ensembl chr14:111,834,168...111,914,304
JBrowse link
G PBX1 PBX homeobox 1 IEA Ensembl GO_REF:0000107 NCBI chr 4:85,824,590...86,170,328
Ensembl chr 4:85,824,666...86,170,191
JBrowse link
G PGF placental growth factor ISO (MGI:MGI:2675756|PMID:13678594) MGI PMID:13678594 MGI:MGI:2675756 NCBI chr 7:98,149,510...98,162,784 JBrowse link
G PKD2 polycystin 2, transient receptor potential cation channel IEA Ensembl GO_REF:0000107 NCBI chr 8:131,002,973...131,058,932
Ensembl chr 8:131,005,407...131,058,932
JBrowse link
G PSPN persephin ISO (MGI:MGI:1196665|PMID:9491986) MGI PMID:9491986 MGI:MGI:1196665 NCBI chr 2:72,698,413...72,701,974
Ensembl chr 2:72,701,298...72,701,840
JBrowse link
G PTCH1 patched 1 IEA Ensembl GO_REF:0000107 NCBI chr10:26,627,165...26,703,225
Ensembl chr10:26,627,325...26,703,225
JBrowse link
G SALL1 spalt like transcription factor 1 ISO (MGI:MGI:2447943|PMID:12482961) UniProtKB PMID:12482961 MGI:MGI:2447943 NCBI chr 6:33,731,666...33,748,698
Ensembl chr 6:33,732,016...33,748,704
JBrowse link
G SHH sonic hedgehog signaling molecule IEA Ensembl GO_REF:0000107 NCBI chr18:2,546,202...2,555,484
Ensembl chr18:2,545,718...2,555,484
JBrowse link
G SIX1 SIX homeobox 1 ISS UniProt GO_REF:0000024 NCBI chr 1:189,620,430...189,624,652
Ensembl chr 1:189,619,853...189,628,187
JBrowse link
G SMAD4 SMAD family member 4 IEA Ensembl GO_REF:0000107 NCBI chr 1:100,521,843...100,633,501
Ensembl chr 1:100,514,791...100,628,029
JBrowse link
G SOX9 SRY-box transcription factor 9 IEA Ensembl GO_REF:0000107 NCBI chr12:8,642,154...8,647,315
Ensembl chr12:8,642,158...8,647,315
JBrowse link
G TCF21 transcription factor 21 ISS UniProt GO_REF:0000024 NCBI chr 1:29,975,280...29,978,273
Ensembl chr 1:29,973,380...29,978,255
JBrowse link
G WNT1 Wnt family member 1 IEA Ensembl GO_REF:0000107 NCBI chr 5:15,010,607...15,015,007
Ensembl chr 5:15,010,985...15,014,079
JBrowse link
G WNT4 Wnt family member 4 ISO (MGI:MGI:3588895|PMID:16054034) MGI PMID:16054034 MGI:MGI:3588895 NCBI chr 6:80,110,238...80,138,165 JBrowse link
G WNT6 Wnt family member 6 IEA Ensembl GO_REF:0000107 NCBI chr15:120,901,471...120,917,359
Ensembl chr15:120,901,283...120,917,398
JBrowse link
G WNT9B Wnt family member 9B IEA Ensembl GO_REF:0000107 NCBI chr12:17,709,046...17,733,434
Ensembl chr12:17,709,049...17,733,438
JBrowse link
G WT1 WT1 transcription factor ISS UniProt GO_REF:0000024 NCBI chr 2:28,411,467...28,456,007
Ensembl chr 2:28,411,794...28,456,003
JBrowse link
bud dilation involved in lung branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 IEA Ensembl GO_REF:0000107 NCBI chr 1:183,415,989...183,422,888
Ensembl chr 1:183,416,134...183,792,417
JBrowse link
bud elongation involved in lung branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 IEA Ensembl GO_REF:0000107 NCBI chr 1:183,415,989...183,422,888
Ensembl chr 1:183,416,134...183,792,417
JBrowse link
G FGF10 fibroblast growth factor 10 IEA Ensembl GO_REF:0000107 NCBI chr16:28,695,465...28,779,953
Ensembl chr16:28,695,469...28,777,541
JBrowse link
G FGFR2 fibroblast growth factor receptor 2 ISO (MGI:MGI:3688953|PMID:16989802) MGI PMID:16989802 MGI:MGI:3688953 NCBI chr14:131,183,095...131,285,001
Ensembl chr14:131,181,710...131,579,703
JBrowse link
G RDH10 retinol dehydrogenase 10 IEA Ensembl GO_REF:0000107 NCBI chr 4:62,569,877...62,600,981
Ensembl chr 4:62,571,093...62,601,508
JBrowse link
G SPRY1 sprouty RTK signaling antagonist 1 IEA Ensembl GO_REF:0000107 NCBI chr 8:100,449,476...100,863,780
Ensembl chr 8:100,450,247...100,863,446
JBrowse link
G SPRY2 sprouty RTK signaling antagonist 2 IEA Ensembl GO_REF:0000107 NCBI chr11:52,153,695...52,158,766
Ensembl chr11:52,153,704...52,160,497
JBrowse link
G YAP1 Yes1 associated transcriptional regulator IEA Ensembl GO_REF:0000107 NCBI chr 9:32,811,629...32,924,926
Ensembl chr 9:32,811,416...32,925,603
JBrowse link
bud outgrowth involved in lung branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGF10 fibroblast growth factor 10 IEA Ensembl GO_REF:0000107 NCBI chr16:28,695,465...28,779,953
Ensembl chr16:28,695,469...28,777,541
JBrowse link
G SHH sonic hedgehog signaling molecule IEA Ensembl GO_REF:0000107 NCBI chr18:2,546,202...2,555,484
Ensembl chr18:2,545,718...2,555,484
JBrowse link
G TMTC3 transmembrane O-mannosyltransferase targeting cadherins 3 ISO (MGI:MGI:5300435|PMID:21956870) MGI PMID:21956870 MGI:MGI:5300435 NCBI chr 5:94,328,452...94,384,266
Ensembl chr 5:94,276,769...94,384,142
JBrowse link
G TNC tenascin C ISO RGD PMID:16928692 RGD:4889612 NCBI chr 1:255,533,235...255,630,381
Ensembl chr 1:255,532,449...255,630,377
JBrowse link
dichotomous subdivision of terminal units involved in lung branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTSH cathepsin H ISS UniProt GO_REF:0000024 NCBI chr 7:48,084,882...48,106,072
Ensembl chr 7:48,083,569...48,106,041
JBrowse link
dichotomous subdivision of terminal units involved in mammary gland duct morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AREG amphiregulin IEA Ensembl GO_REF:0000107 NCBI chr 8:70,417,935...70,428,106
Ensembl chr 8:70,417,923...70,428,102
JBrowse link
G TFAP2C transcription factor AP-2 gamma ISO (MGI:MGI:4422106|PMID:20131354) MGI PMID:20131354 MGI:MGI:4422106 NCBI chr17:57,164,400...57,174,923
Ensembl chr17:57,164,404...57,174,107
JBrowse link
dichotomous subdivision of terminal units involved in ureteric bud branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXD1 forkhead box D1 IEA Ensembl GO_REF:0000107 NCBI chr 2:82,607,113...82,612,005
Ensembl chr 2:82,607,848...82,609,248
JBrowse link
epithelial cell proliferation involved in mammary gland duct elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AREG amphiregulin IEA Ensembl GO_REF:0000107 NCBI chr 8:70,417,935...70,428,106
Ensembl chr 8:70,417,923...70,428,102
JBrowse link
G ESR1 estrogen receptor 1 IEA Ensembl GO_REF:0000107 NCBI chr 1:14,217,032...14,604,906
Ensembl chr 1:14,217,036...14,493,363
JBrowse link
G MED1 mediator complex subunit 1 IEA Ensembl GO_REF:0000107 NCBI chr12:22,830,405...22,872,420
Ensembl chr12:22,839,005...22,872,407
JBrowse link
G TFAP2C transcription factor AP-2 gamma ISO (MGI:MGI:4422106|PMID:20131354) MGI PMID:20131354 MGI:MGI:4422106 NCBI chr17:57,164,400...57,174,923
Ensembl chr17:57,164,404...57,174,107
JBrowse link
G WNT5A Wnt family member 5A IEA Ensembl GO_REF:0000107 NCBI chr13:37,344,684...37,367,215
Ensembl chr13:37,344,699...37,367,207
JBrowse link
epithelial tube branching involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 ISO (PMID:8674409) RGD
MGI
PMID:8674409, PMID:8769111 RGD:2306315 NCBI chr 1:183,415,989...183,422,888
Ensembl chr 1:183,416,134...183,792,417
JBrowse link
G CTNNB1 catenin beta 1 IEA Ensembl GO_REF:0000107 NCBI chr13:25,163,550...25,208,314
Ensembl chr13:25,137,173...25,208,311
JBrowse link
G CTSD cathepsin D NOT ISO (MGI:MGI:3722010|PMID:17500053) UniProtKB PMID:17500053 MGI:MGI:3722010 NCBI chr 2:1,188,548...1,197,642
Ensembl chr 2:1,188,549...1,197,635
JBrowse link
G CTSL cathepsin L NOT ISO (MGI:MGI:3722010|PMID:17500053) UniProtKB PMID:17500053 MGI:MGI:3722010 NCBI chr10:27,668,523...27,674,705
Ensembl chr10:27,668,264...27,674,618
JBrowse link
G CTSZ cathepsin Z IEA Ensembl GO_REF:0000107 NCBI chr17:59,141,497...59,149,377
Ensembl chr17:59,141,501...59,149,298
JBrowse link
G DAG1 dystroglycan 1 IEA Ensembl GO_REF:0000107 NCBI chr13:32,028,019...32,092,450
Ensembl chr13:32,029,329...32,092,453
JBrowse link
G DLG5 discs large MAGUK scaffold protein 5 IEA Ensembl GO_REF:0000107 NCBI chr14:80,249,693...80,377,496
Ensembl chr14:80,249,693...80,377,505
JBrowse link
G ESRP1 epithelial splicing regulatory protein 1 ISO (MGI:MGI:5699497|PMID:26371508) MGI PMID:26371508 MGI:MGI:5699497 NCBI chr 4:41,993,944...42,061,706
Ensembl chr 4:41,993,944...42,061,236
JBrowse link
G ESRP2 epithelial splicing regulatory protein 2 IEA Ensembl GO_REF:0000107 NCBI chr 6:28,804,425...28,814,478
Ensembl chr 6:28,802,655...28,812,963
JBrowse link
G EXT1 exostosin glycosyltransferase 1 ISO (MGI:MGI:5912649|PMID:28859094) MGI PMID:28859094 MGI:MGI:5912649 NCBI chr 4:20,645,002...20,935,769
Ensembl chr 4:20,645,809...20,935,564
JBrowse link
G FGF10 fibroblast growth factor 10 ISO (MGI:MGI:1101385|PMID:9428423), (MGI:MGI:3609523|PMID:16169547), (MGI:MGI:3613102|PMID:16375885)
(MGI:MGI:3716020|PMID:17560563)
(MGI:MGI:1327513|PMID:9916808)
(MGI:MGI:3578606|PMID:15800000)
(MGI:MGI:1309706|PMID:9784490)
MGI PMID:9428423, PMID:9784490, PMID:9916808, PMID:15800000, PMID:16169547, PMID:16375885, PMID:17560563 MGI:MGI:1101385, MGI:MGI:1309706, MGI:MGI:1327513, MGI:MGI:3578606, MGI:MGI:3609523, MGI:MGI:3613102, MGI:MGI:3716020 NCBI chr16:28,695,465...28,779,953
Ensembl chr16:28,695,469...28,777,541
JBrowse link
G FGFR2 fibroblast growth factor receptor 2 ISO (MGI:MGI:5523405|PMID:24058167) MGI PMID:24058167 MGI:MGI:5523405 NCBI chr14:131,183,095...131,285,001
Ensembl chr14:131,181,710...131,579,703
JBrowse link
G FOXA1 forkhead box A1 IEA Ensembl GO_REF:0000107 NCBI chr 7:62,471,233...62,479,638
Ensembl chr 7:62,471,228...62,479,223
JBrowse link
G FOXA2 forkhead box A2 ISO (MGI:MGI:3579763|PMID:15668254) MGI PMID:15668254 MGI:MGI:3579763 NCBI chr17:29,997,397...30,001,704
Ensembl chr17:29,997,400...30,001,707
JBrowse link
G FOXF1 forkhead box F1 IEA Ensembl GO_REF:0000107 NCBI chr 6:2,579,348...2,598,122
Ensembl chr 6:2,592,993...2,597,659
JBrowse link
G HHIP hedgehog interacting protein IEA Ensembl GO_REF:0000107 NCBI chr 8:83,583,735...83,678,368
Ensembl chr 8:83,583,737...83,679,136
JBrowse link
G HMGA2 high mobility group AT-hook 2 ISO (MGI:MGI:5638831|PMID:24661562) MGI PMID:24661562 MGI:MGI:5638831 NCBI chr 5:30,188,521...30,329,635 JBrowse link
G HOXA5 homeobox A5 IEA Ensembl GO_REF:0000107 NCBI chr18:45,429,691...45,432,723
Ensembl chr18:45,421,663...45,432,885
JBrowse link
G KRAS KRAS proto-oncogene, GTPase IEA Ensembl GO_REF:0000107 NCBI chr 5:48,508,774...48,546,260
Ensembl chr 5:48,508,790...48,549,346
JBrowse link
G LAMA1 laminin subunit alpha 1 IEA Ensembl GO_REF:0000107 NCBI chr 6:100,332,843...100,468,457
Ensembl chr 6:100,332,873...100,468,454
JBrowse link
G NKX2-1 NK2 homeobox 1 IEA Ensembl GO_REF:0000107 NCBI chr 7:63,487,200...63,491,580
Ensembl chr 7:63,487,807...63,491,575
JBrowse link
G RSPO2 R-spondin 2 IEA Ensembl GO_REF:0000107 NCBI chr 4:29,415,774...29,577,890
Ensembl chr 4:29,414,806...29,579,674
JBrowse link
G SHH sonic hedgehog signaling molecule ISO (MGI:MGI:1277744|PMID:9731532), (MGI:MGI:1346236|PMID:10500184) RGD
MGI
PMID:8769111, PMID:9731532, PMID:10500184 MGI:MGI:1277744, MGI:MGI:1346236, RGD:2306315 NCBI chr18:2,546,202...2,555,484
Ensembl chr18:2,545,718...2,555,484
JBrowse link
G SOX2 SRY-box transcription factor 2 ISO (MGI:MGI:3795352|PMID:18374910) MGI PMID:18374910 MGI:MGI:3795352 NCBI chr13:119,668,476...119,669,435 JBrowse link
G SOX9 SRY-box transcription factor 9 IEA Ensembl GO_REF:0000107 NCBI chr12:8,642,154...8,647,315
Ensembl chr12:8,642,158...8,647,315
JBrowse link
lateral sprouting involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC102159820 cadherin EGF LAG seven-pass G-type receptor 1 IEA Ensembl GO_REF:0000107 NCBI chr 5:3,114,410...3,203,378
Ensembl chr 5:2,980,069...3,204,803
JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 IEA Ensembl GO_REF:0000107 NCBI chr 4:90,051,994...90,080,701
Ensembl chr 4:90,053,380...90,080,656
JBrowse link
lateral sprouting involved in mammary gland duct morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AR androgen receptor IEA Ensembl GO_REF:0000107 NCBI chr  X:53,609,113...53,806,778
Ensembl chr  X:53,609,176...53,805,578
JBrowse link
G WNT5A Wnt family member 5A IEA Ensembl GO_REF:0000107 NCBI chr13:37,344,684...37,367,215
Ensembl chr13:37,344,699...37,367,207
JBrowse link
lung induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTNNB1 catenin beta 1 IEA Ensembl GO_REF:0000107 NCBI chr13:25,163,550...25,208,314
Ensembl chr13:25,137,173...25,208,311
JBrowse link
G WNT2 Wnt family member 2 IEA Ensembl GO_REF:0000107 NCBI chr18:28,945,825...28,993,969
Ensembl chr18:28,946,277...29,028,107
JBrowse link
G WNT2B Wnt family member 2B IEA Ensembl GO_REF:0000107 NCBI chr 4:107,906,141...107,923,343
Ensembl chr 4:107,903,502...107,921,118
JBrowse link
mammary gland branching involved in pregnancy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CSMD1 CUB and Sushi multiple domains 1 ISO (MGI:MGI:6369467|PMID:31604923) MGI PMID:31604923 MGI:MGI:6369467 NCBI chr15:34,361,722...36,243,762
Ensembl chr15:34,364,050...35,023,152
JBrowse link
G ESR1 estrogen receptor 1 IEA Ensembl GO_REF:0000107 NCBI chr 1:14,217,032...14,604,906
Ensembl chr 1:14,217,036...14,493,363
JBrowse link
G MED1 mediator complex subunit 1 IEA Ensembl GO_REF:0000107 NCBI chr12:22,830,405...22,872,420
Ensembl chr12:22,839,005...22,872,407
JBrowse link
G VDR vitamin D receptor IEA Ensembl GO_REF:0000107 NCBI chr 5:78,205,807...78,266,505
Ensembl chr 5:78,205,810...78,267,321
JBrowse link
mammary gland branching involved in thelarche term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AREG amphiregulin IEA Ensembl GO_REF:0000107 NCBI chr 8:70,417,935...70,428,106
Ensembl chr 8:70,417,923...70,428,102
JBrowse link
G MED1 mediator complex subunit 1 IEA Ensembl GO_REF:0000107 NCBI chr12:22,830,405...22,872,420
Ensembl chr12:22,839,005...22,872,407
JBrowse link
G NCOA3 nuclear receptor coactivator 3 ISO (MGI:MGI:1859522|PMID:11015591) MGI PMID:11015591 MGI:MGI:1859522 NCBI chr17:49,528,275...49,660,471
Ensembl chr17:49,528,164...49,663,203
JBrowse link
G PHB2 prohibitin 2 IEA Ensembl GO_REF:0000107 NCBI chr 5:63,751,566...63,756,480
Ensembl chr 5:63,751,558...63,756,478
JBrowse link
G TGFB1 transforming growth factor beta 1 IEA Ensembl GO_REF:0000107 NCBI chr 6:49,332,169...49,348,642
Ensembl chr 6:49,332,169...49,349,048
JBrowse link
G WNT5A Wnt family member 5A IEA Ensembl GO_REF:0000107 NCBI chr13:37,344,684...37,367,215
Ensembl chr13:37,344,699...37,367,207
JBrowse link
negative regulation of branch elongation involved in ureteric bud branching by BMP signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 IEA Ensembl GO_REF:0000107 NCBI chr 1:183,415,989...183,422,888
Ensembl chr 1:183,416,134...183,792,417
JBrowse link
negative regulation of branching involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TNF tumor necrosis factor IEA Ensembl GO_REF:0000107 NCBI chr 7:23,699,635...23,702,393
Ensembl chr 7:23,699,636...23,703,655
JBrowse link
negative regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 ISO (MGI:MGI:3525902|PMID:15634693)
(MGI:MGI:4949995|PMID:21281623)
(PMID:12141440), (PMID:17118062)
UniProtKB
MGI
PMID:12141440, PMID:15634693, PMID:17118062, PMID:21281623 MGI:MGI:3525902, MGI:MGI:4949995 NCBI chr 1:183,415,989...183,422,888
Ensembl chr 1:183,416,134...183,792,417
JBrowse link
G TACSTD2 tumor associated calcium signal transducer 2 ISS UniProt GO_REF:0000024 NCBI chr 6:153,859,488...153,861,508
Ensembl chr 6:153,859,482...153,861,492
JBrowse link
orthogonal dichotomous subdivision of terminal units involved in lung branching morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC102159820 cadherin EGF LAG seven-pass G-type receptor 1 IEA Ensembl GO_REF:0000107 NCBI chr 5:3,114,410...3,203,378
Ensembl chr 5:2,980,069...3,204,803
JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 IEA Ensembl GO_REF:0000107 NCBI chr 4:90,051,994...90,080,701
Ensembl chr 4:90,053,380...90,080,656
JBrowse link
planar dichotomous subdivision of terminal units involved in lung branching morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC102159820 cadherin EGF LAG seven-pass G-type receptor 1 IEA Ensembl GO_REF:0000107 NCBI chr 5:3,114,410...3,203,378
Ensembl chr 5:2,980,069...3,204,803
JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 IEA Ensembl GO_REF:0000107 NCBI chr 4:90,051,994...90,080,701
Ensembl chr 4:90,053,380...90,080,656
JBrowse link
positive regulation blood vessel branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase IEA Ensembl GO_REF:0000107 NCBI chr 1:270,761,641...270,906,708
Ensembl chr 1:270,761,668...270,906,711
JBrowse link
G MDK midkine IEA Ensembl GO_REF:0000107 NCBI chr 2:16,130,787...16,133,791
Ensembl chr 2:16,130,782...16,133,510
JBrowse link
G SIRT6 sirtuin 6 IEA Ensembl GO_REF:0000107 NCBI chr 2:74,568,539...74,577,774
Ensembl chr 2:74,568,436...74,577,772
JBrowse link
positive regulation of branching involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 IEA Ensembl GO_REF:0000107 NCBI chr 1:183,415,989...183,422,888
Ensembl chr 1:183,416,134...183,792,417
JBrowse link
G CTNNB1 catenin beta 1 ISO (MGI:MGI:3801531|PMID:18533146) MGI PMID:18533146 MGI:MGI:3801531 NCBI chr13:25,163,550...25,208,314
Ensembl chr13:25,137,173...25,208,311
JBrowse link
G PDGFRA platelet derived growth factor receptor alpha ISO RGD PMID:8879189 RGD:11087558 NCBI chr 8:40,966,568...41,021,440
Ensembl chr 8:40,967,493...41,021,442
JBrowse link
positive regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGT angiotensinogen IEA Ensembl GO_REF:0000107 NCBI chr14:59,643,030...59,656,835
Ensembl chr14:59,643,292...59,672,428
JBrowse link
G AGTR1 angiotensin II receptor type 1 ISO PMID:17537984 UniProt PMID:17537984 RGD:1643596 NCBI chr13:88,934,873...88,980,317
Ensembl chr13:88,934,868...88,983,131
JBrowse link
G AGTR2 angiotensin II receptor type 2 IEA Ensembl GO_REF:0000107 NCBI chr  X:95,267,709...95,272,237
Ensembl chr  X:95,269,300...95,270,388
JBrowse link
G BMP4 bone morphogenetic protein 4 ISO PMID:17537984 UniProt PMID:17537984 RGD:1643596 NCBI chr 1:183,415,989...183,422,888
Ensembl chr 1:183,416,134...183,792,417
JBrowse link
G GDNF glial cell derived neurotrophic factor IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr16:22,936,602...22,965,929
Ensembl chr16:22,936,601...22,965,886
JBrowse link
G GREM1 gremlin 1, DAN family BMP antagonist IEA Ensembl GO_REF:0000107 NCBI chr 1:136,617,041...136,629,293
Ensembl chr 1:136,617,069...136,629,292
JBrowse link
G HOXB7 homeobox B7 IEA Ensembl GO_REF:0000107 NCBI chr12:24,861,165...24,864,675
Ensembl chr12:24,861,174...24,864,620
JBrowse link
G LGR4 leucine rich repeat containing G protein-coupled receptor 4 IEA Ensembl GO_REF:0000107 NCBI chr 2:32,871,837...32,979,150
Ensembl chr 2:32,871,871...32,979,148
JBrowse link
G LHX1 LIM homeobox 1 IEA Ensembl GO_REF:0000107 NCBI chr12:38,450,708...38,457,583
Ensembl chr12:38,450,708...38,456,139
JBrowse link
G MAGED1 MAGE family member D1 IEA Ensembl GO_REF:0000107 NCBI chr  X:45,258,761...45,329,282
Ensembl chr  X:45,282,056...45,329,278
JBrowse link
G NOG noggin ISS UniProt GO_REF:0000024 NCBI chr12:32,891,321...32,892,206
Ensembl chr12:32,891,321...32,892,206
JBrowse link
G PAX2 paired box 2 ISO (MGI:MGI:3704067|PMID:17314325), (MGI:MGI:3833510|PMID:17881463), (MGI:MGI:5009394|PMID:17538188) UniProtKB PMID:17314325, PMID:17538188, PMID:17881463 MGI:MGI:3704067, MGI:MGI:3833510, MGI:MGI:5009394 NCBI chr14:111,822,334...111,914,950
Ensembl chr14:111,834,168...111,914,304
JBrowse link
G SALL1 spalt like transcription factor 1 ISO (MGI:MGI:5563280|PMID:24550112) MGI PMID:24550112 MGI:MGI:5563280 NCBI chr 6:33,731,666...33,748,698
Ensembl chr 6:33,732,016...33,748,704
JBrowse link
G SIX1 SIX homeobox 1 ISS UniProt GO_REF:0000024 NCBI chr 1:189,620,430...189,624,652
Ensembl chr 1:189,619,853...189,628,187
JBrowse link
G SIX4 SIX homeobox 4 IEA Ensembl GO_REF:0000107 NCBI chr 1:189,670,390...189,682,378
Ensembl chr 1:189,670,390...189,682,783
JBrowse link
G SMO smoothened, frizzled class receptor IEA Ensembl GO_REF:0000107 NCBI chr18:19,450,730...19,478,796
Ensembl chr18:19,450,734...19,479,374
JBrowse link
G SOX8 SRY-box transcription factor 8 IEA Ensembl GO_REF:0000107 NCBI chr 3:40,825,151...40,830,085
Ensembl chr 3:40,710,043...40,830,737
JBrowse link
G SOX9 SRY-box transcription factor 9 ISS
IEA
UniProt
Ensembl
GO_REF:0000024, GO_REF:0000107 NCBI chr12:8,642,154...8,647,315
Ensembl chr12:8,642,158...8,647,315
JBrowse link
G TGFB1 transforming growth factor beta 1 ISO PMID:17537984 UniProt PMID:17537984 RGD:1643596 NCBI chr 6:49,332,169...49,348,642
Ensembl chr 6:49,332,169...49,349,048
JBrowse link
G VEGFA vascular endothelial growth factor A ISO (MGI:MGI:3611700|PMID:16291795) UniProtKB PMID:16291795 MGI:MGI:3611700 NCBI chr 7:38,746,393...38,762,282
Ensembl chr 7:38,746,052...38,761,038
JBrowse link
G WNT2B Wnt family member 2B IEA Ensembl GO_REF:0000107 NCBI chr 4:107,906,141...107,923,343
Ensembl chr 4:107,903,502...107,921,118
JBrowse link
primary lung bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HHEX hematopoietically expressed homeobox ISO (MGI:MGI:3703395|PMID:16364283) MGI PMID:16364283 MGI:MGI:3703395 NCBI chr14:104,194,424...104,199,684
Ensembl chr14:104,194,343...104,200,221
JBrowse link
G RDH10 retinol dehydrogenase 10 IEA Ensembl GO_REF:0000107 NCBI chr 4:62,569,877...62,600,981
Ensembl chr 4:62,571,093...62,601,508
JBrowse link
regulation of blood vessel branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FKBPL FKBP prolyl isomerase like IEA Ensembl GO_REF:0000107 NCBI chr 7:24,172,227...24,174,553
Ensembl chr 7:24,172,227...24,173,565
JBrowse link
regulation of branch elongation involved in ureteric bud branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HNF1B HNF1 homeobox B IEA Ensembl GO_REF:0000107 NCBI chr12:39,143,119...39,201,631
Ensembl chr12:39,143,121...39,313,511
JBrowse link
G SIX1 SIX homeobox 1 ISS UniProt GO_REF:0000024 NCBI chr 1:189,620,430...189,624,652
Ensembl chr 1:189,619,853...189,628,187
JBrowse link
G SIX4 SIX homeobox 4 IEA Ensembl GO_REF:0000107 NCBI chr 1:189,670,390...189,682,378
Ensembl chr 1:189,670,390...189,682,783
JBrowse link
regulation of branching involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SOX9 SRY-box transcription factor 9 IEA Ensembl GO_REF:0000107 NCBI chr12:8,642,154...8,647,315
Ensembl chr12:8,642,158...8,647,315
JBrowse link
regulation of branching involved in mammary gland duct morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAV3 caveolin 3 IEA Ensembl GO_REF:0000107 NCBI chr13:65,117,868...65,130,886
Ensembl chr13:65,117,776...65,134,066
JBrowse link
G ETV5 ETS variant transcription factor 5 IEA Ensembl GO_REF:0000107 NCBI chr13:123,873,346...123,930,292
Ensembl chr13:123,873,349...123,930,298
JBrowse link
G PHB2 prohibitin 2 IEA Ensembl GO_REF:0000107 NCBI chr 5:63,751,566...63,756,480
Ensembl chr 5:63,751,558...63,756,478
JBrowse link
G TGFB1 transforming growth factor beta 1 IEA Ensembl GO_REF:0000107 NCBI chr 6:49,332,169...49,348,642
Ensembl chr 6:49,332,169...49,349,048
JBrowse link
G WNT5A Wnt family member 5A IEA Ensembl GO_REF:0000107 NCBI chr13:37,344,684...37,367,215
Ensembl chr13:37,344,699...37,367,207
JBrowse link
regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SIX2 SIX homeobox 2 IEA Ensembl GO_REF:0000107 NCBI chr 3:95,460,046...95,463,428
Ensembl chr 3:95,459,937...95,464,066
JBrowse link
tertiary branching involved in mammary gland duct morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AR androgen receptor IEA Ensembl GO_REF:0000107 NCBI chr  X:53,609,113...53,806,778
Ensembl chr  X:53,609,176...53,805,578
JBrowse link
G PGR progesterone receptor IEA Ensembl GO_REF:0000107 NCBI chr 9:32,035,684...32,129,776
Ensembl chr 9:32,035,684...32,129,221
JBrowse link
G WNT4 Wnt family member 4 ISO (MGI:MGI:1354852|PMID:10733525) MGI PMID:10733525 MGI:MGI:1354852 NCBI chr 6:80,110,238...80,138,165 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16524
    developmental process 6285
      anatomical structure morphogenesis 2766
        tube morphogenesis 903
          branching morphogenesis of an epithelial tube 187
            branching involved in blood vessel morphogenesis + 41
            branching involved in lymph vessel morphogenesis 1
            branching involved in mammary gland duct morphogenesis + 29
            branching involved in open tracheal system development + 0
            branching involved in ureteric bud morphogenesis + 64
            epithelial tube branching involved in lung morphogenesis + 39
            tube fusion + 0
Path 2
Term Annotations click to browse term
  biological_process 16524
    developmental process 6285
      anatomical structure development 5826
        tissue development 2011
          epithelium development 1206
            morphogenesis of an epithelium 571
              epithelial tube morphogenesis 389
                branching morphogenesis of an epithelial tube 187
                  branching involved in blood vessel morphogenesis + 41
                  branching involved in lymph vessel morphogenesis 1
                  branching involved in mammary gland duct morphogenesis + 29
                  branching involved in open tracheal system development + 0
                  branching involved in ureteric bud morphogenesis + 64
                  epithelial tube branching involved in lung morphogenesis + 39
                  tube fusion + 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.