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ONTOLOGY REPORT - ANNOTATIONS


Term:branching morphogenesis of an epithelial tube
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Accession:GO:0048754 term browser browse the term
Definition:The process in which the anatomical structures of branches in an epithelial tube are generated and organized. A tube is a long hollow cylinder.
Synonyms:related_synonym: tubulogenesis


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branching morphogenesis of an epithelial tube term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4galt1 beta-1,4-galactosyltransferase 1 ISO MGI:MGI:2178779|MGI:MGI:2450889 (MGI:MGI:2178150|PMID:11900463), (MGI:MGI:3052392|PMID:15282149) RGD PMID:11900463, PMID:15282149 MGI:MGI:2178150, MGI:MGI:3052392 NCBI chr 5:57,121,768...57,168,610
Ensembl chr 5:57,121,769...57,168,610
JBrowse link
G Bmp4 bone morphogenetic protein 4 ISO
ISS
(PMID:10706139)
GO_REF:0000024
RGD
UniProt
PMID:10706139 GO_REF:0000024 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Bmp7 bone morphogenetic protein 7 ISO (MGI:MGI:3575981|PMID:15831470) RGD PMID:15831470 MGI:MGI:3575981 NCBI chr 3:170,879,972...170,955,820
Ensembl chr 3:170,879,973...170,955,399
JBrowse link
G Casr calcium-sensing receptor IMP positive regulation RGD PMID:20117086 RGD:7206840 NCBI chr11:67,188,204...67,262,261
Ensembl chr11:67,188,630...67,258,771
JBrowse link
G Clic4 chloride intracellular channel 4 ISO
IEA
MGI:MGI:3838012 (MGI:MGI:3837628|PMID:19197003)
GO_REF:0000107
RGD
Ensembl
PMID:19197003 GO_REF:0000107, MGI:MGI:3837628 NCBI chr 5:153,568,937...153,625,669
Ensembl chr 5:153,568,745...153,625,869
JBrowse link
G Dicer1 dicer 1 ribonuclease III ISO MGI:MGI:3053959|MGI:MGI:3589209 (MGI:MGI:3617296|PMID:16452165) RGD PMID:16452165 MGI:MGI:3617296 NCBI chr 6:128,388,084...128,453,234
Ensembl chr 6:128,388,053...128,434,183
JBrowse link
G Egf epidermal growth factor ISO (MGI:MGI:3575981|PMID:15831470) RGD PMID:15831470 MGI:MGI:3575981 NCBI chr 2:68,820,616...68,895,537 JBrowse link
G Fgf10 fibroblast growth factor 10 ISO (PMID:17959718) RGD PMID:17959718 NCBI chr 2:51,673,480...51,747,533
Ensembl chr 2:51,672,722...51,750,369
JBrowse link
G Gdf7 growth differentiation factor 7 ISO MGI:MGI:2387817 (MGI:MGI:1934988|PMID:11356025) RGD PMID:11356025 MGI:MGI:1934988 NCBI chr 6:33,496,596...33,507,626
Ensembl chr 6:33,503,217...33,507,542
JBrowse link
G Gli2 GLI family zinc finger 2 ISO MGI:MGI:1857509 (MGI:MGI:1277743|PMID:9731531) RGD PMID:9731531 MGI:MGI:1277743 NCBI chr13:34,829,021...35,049,172
Ensembl chr13:34,829,139...35,048,444
JBrowse link
G Gli3 GLI family zinc finger 3 ISO MGI:MGI:1856276 (MGI:MGI:3608164|PMID:16247775) RGD PMID:16247775 MGI:MGI:3608164 NCBI chr17:52,294,942...52,569,036
Ensembl chr17:52,294,942...52,569,036
JBrowse link
G Hnf1b HNF1 homeobox B ISO MGI:MGI:1857856 (MGI:MGI:4430439|PMID:20040500) RGD PMID:20040500 MGI:MGI:4430439 NCBI chr10:71,159,863...71,218,902
Ensembl chr10:71,159,869...71,218,902
JBrowse link
G Igf1 insulin-like growth factor 1 ISO MGI:MGI:1861704 (MGI:MGI:3616136|PMID:15059953) RGD PMID:15059953 MGI:MGI:3616136 NCBI chr 7:28,412,123...28,491,815
Ensembl chr 7:28,412,198...28,486,609
JBrowse link
G Kdr kinase insert domain receptor ISO (MGI:MGI:3613102|PMID:16375885) RGD PMID:16375885 MGI:MGI:3613102 NCBI chr14:34,727,677...34,787,127
Ensembl chr14:34,727,623...34,787,183
JBrowse link
G Lama5 laminin subunit alpha 5 ISO (MGI:MGI:2678847|PMID:14568553) RGD PMID:14568553 MGI:MGI:2678847 NCBI chr 3:175,553,042...175,601,112
Ensembl chr 3:175,553,045...175,601,127
JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase IEA
ISO
GO_REF:0000107
(PMID:16153003)
Ensembl
RGD
PMID:16153003 GO_REF:0000107 NCBI chr 4:44,747,467...44,854,628
Ensembl chr 4:44,774,741...44,852,665
JBrowse link
G Mgp matrix Gla protein IMP fetal lung RGD PMID:15136295 RGD:1582506 NCBI chr 4:170,856,783...170,860,105
Ensembl chr 4:170,856,751...170,860,225
JBrowse link
G Mks1 MKS transition zone complex subunit 1 IEA
ISO
GO_REF:0000107
(MGI:MGI:4441259|PMID:17185389)
Ensembl
RGD
PMID:17185389 GO_REF:0000107, MGI:MGI:4441259 NCBI chr10:75,149,814...75,160,481
Ensembl chr10:75,149,814...75,160,480
JBrowse link
G Mmp14 matrix metallopeptidase 14 ISO MGI:MGI:2386246 (MGI:MGI:3527919|PMID:15572153) RGD PMID:15572153 MGI:MGI:3527919 NCBI chr15:33,074,441...33,083,666
Ensembl chr15:33,074,441...33,083,655
JBrowse link
G Mycn MYCN proto-oncogene, bHLH transcription factor ISO
IEA
MGI:MGI:2388717|MGI:MGI:3574949 (MGI:MGI:3574742|PMID:15716345)
GO_REF:0000107
RGD
Ensembl
PMID:15716345 GO_REF:0000107, MGI:MGI:3574742 NCBI chr 6:38,222,554...38,228,419
Ensembl chr 6:38,222,555...38,228,379
JBrowse link
G Nkx3-1 NK3 homeobox 1 ISO
ISS
MGI:MGI:1928655 (MGI:MGI:1891543|PMID:11002344)
GO_REF:0000024
RGD
UniProt
PMID:11002344 GO_REF:0000024, MGI:MGI:1891543 NCBI chr15:51,065,316...51,067,908
Ensembl chr15:51,065,316...51,068,421
JBrowse link
G Notch1 notch receptor 1 ISO (MGI:MGI:3529381|PMID:15064243) RGD PMID:15064243 MGI:MGI:3529381 NCBI chr 3:3,905,562...3,951,015
Ensembl chr 3:3,905,453...3,951,025
JBrowse link
G Pak1 p21 (RAC1) activated kinase 1 ISO
ISS
(PMID:20457839)
GO_REF:0000024
RGD
UniProt
PMID:20457839 GO_REF:0000024 NCBI chr 1:162,768,156...162,883,356
Ensembl chr 1:162,768,156...162,883,355
JBrowse link
G Pkd1 polycystin 1, transient receptor potential channel interacting ISO (PMID:12482949)
(MGI:MGI:5603942|PMID:24939912)
RGD PMID:12482949, PMID:24939912 MGI:MGI:5603942 NCBI chr10:13,914,057...13,962,008
Ensembl chr10:13,915,214...13,962,008
JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha ISO (MGI:MGI:3039057|PMID:15042703) RGD PMID:15042703 MGI:MGI:3039057 NCBI chr 1:219,439,953...219,443,570
Ensembl chr 1:219,439,953...219,443,570
JBrowse link
G Pxn paxillin ISO (MGI:MGI:2680875|PMID:14636584) RGD PMID:14636584 MGI:MGI:2680875 NCBI chr12:46,797,953...46,845,107
Ensembl chr12:46,797,954...46,845,080
JBrowse link
G Rasip1 Ras interacting protein 1 ISO (MGI:MGI:5052000|PMID:21396893) RGD PMID:21396893 MGI:MGI:5052000 NCBI chr 1:101,609,209...101,621,648
Ensembl chr 1:101,610,773...101,621,646
JBrowse link
G Sema5a semaphorin 5A ISO MGI:MGI:3577050 (MGI:MGI:3575993|PMID:15743826) RGD PMID:15743826 MGI:MGI:3575993 NCBI chr 2:85,377,318...85,808,970
Ensembl chr 2:85,377,318...85,808,970
JBrowse link
G Shh sonic hedgehog signaling molecule ISS
ISO
GO_REF:0000024
MGI:MGI:1857796|MGI:MGI:1934261|MGI:MGI:1934268|MGI:MGI:2679524 (MGI:MGI:1289788|PMID:9768363), (MGI:MGI:3039063|PMID:15042696), (MGI:MGI:3050270|PMID:15305287)
UniProt
RGD
PMID:9768363, PMID:15042696, PMID:15305287 GO_REF:0000024, MGI:MGI:1289788, MGI:MGI:3039063, MGI:MGI:3050270 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
G Slit2 slit guidance ligand 2 IEA
ISO
GO_REF:0000107
(PMID:18345009), (PMID:19005219)
Ensembl
RGD
PMID:18345009, PMID:19005219 GO_REF:0000107 NCBI chr14:66,831,848...67,171,491
Ensembl chr14:66,831,848...67,170,361
JBrowse link
G Spry2 sprouty RTK signaling antagonist 2 ISO (MGI:MGI:1331548|PMID:10074434) RGD PMID:10074434 MGI:MGI:1331548 NCBI chr15:90,172,769...90,177,823
Ensembl chr15:90,172,975...90,175,802
JBrowse link
G Timeless timeless circadian regulator ISO
IEA
(MGI:MGI:2675515|PMID:12950082)
GO_REF:0000107
RGD
Ensembl
PMID:12950082 GO_REF:0000107, MGI:MGI:2675515 NCBI chr 7:2,643,288...2,667,329
Ensembl chr 7:2,643,288...2,667,628
JBrowse link
G Tmem67 transmembrane protein 67 ISO (MGI:MGI:4441259|PMID:17185389) RGD PMID:17185389 MGI:MGI:4441259 NCBI chr 5:25,666,138...25,721,056
Ensembl chr 5:25,666,137...25,721,072
JBrowse link
G Vegfa vascular endothelial growth factor A ISO (MGI:MGI:3613102|PMID:16375885) RGD PMID:16375885 MGI:MGI:3613102 NCBI chr 9:17,340,341...17,355,681
Ensembl chr 9:17,340,341...17,355,681
JBrowse link
G Wnt4 Wnt family member 4 ISO UniProtKB:P22727 (MGI:MGI:2178881|PMID:11948913) RGD PMID:11948913 MGI:MGI:2178881 NCBI chr 5:155,649,238...155,668,065
Ensembl chr 5:155,649,217...155,672,579
JBrowse link
G Wnt9b Wnt family member 9B ISO MGI:MGI:3526437 (MGI:MGI:3588895|PMID:16054034) RGD PMID:16054034 MGI:MGI:3588895 NCBI chr10:91,785,892...91,808,061
Ensembl chr10:91,785,893...91,807,937
JBrowse link
branch elongation involved in mammary gland duct branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tgfb1 transforming growth factor, beta 1 ISO MGI:MGI:1857258 (MGI:MGI:3814777|PMID:18614704) RGD PMID:18614704 MGI:MGI:3814777 NCBI chr 1:82,480,875...82,497,196
Ensembl chr 1:82,480,195...82,497,199
JBrowse link
branch elongation involved in ureteric bud branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf1 fibroblast growth factor 1 ISO
ISS
(PMID:11731227)
GO_REF:0000024
RGD
UniProt
PMID:11731227 GO_REF:0000024 NCBI chr18:32,273,830...32,359,831
Ensembl chr18:32,273,770...32,359,824
JBrowse link
branching involved in blood vessel morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor type 1 ISO
IEA
MGI:MGI:2386570|MGI:MGI:2651395 (MGI:MGI:3703113|PMID:17078885)
GO_REF:0000107
RGD
Ensembl
PMID:17078885 GO_REF:0000107, MGI:MGI:3703113 NCBI chr 3:44,432,476...44,539,680
Ensembl chr 3:44,432,471...44,522,930
JBrowse link
G Ahr aryl hydrocarbon receptor ISO (MGI:MGI:1889403|PMID:10973493) RGD PMID:10973493 MGI:MGI:1889403 NCBI chr 6:54,963,990...55,001,806
Ensembl chr 6:54,963,990...55,001,464
JBrowse link
G Col4a1 collagen type IV alpha 1 chain ISO (PMID:20818663) RGD PMID:20818663 NCBI chr16:83,522,162...83,632,153
Ensembl chr16:83,522,162...83,632,153
JBrowse link
G Ctnnb1 catenin beta 1 IEA
ISO
GO_REF:0000107
MGI:MGI:1858008|MGI:MGI:2148567 (MGI:MGI:2675534|PMID:12975353), (MGI:MGI:3833040|PMID:19154719)
Ensembl
RGD
PMID:12975353, PMID:19154719 GO_REF:0000107, MGI:MGI:2675534, MGI:MGI:3833040 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Cxcl12 C-X-C motif chemokine ligand 12 ISO MGI:MGI:1934384 (MGI:MGI:3578491|PMID:15626744) RGD PMID:15626744 MGI:MGI:3578491 NCBI chr 4:149,261,044...149,273,891
Ensembl chr 4:149,261,044...149,273,891
JBrowse link
G Cxcr4 C-X-C motif chemokine receptor 4 ISO MGI:MGI:1934442 (MGI:MGI:3578491|PMID:15626744) RGD PMID:15626744 MGI:MGI:3578491 NCBI chr13:45,314,952...45,318,856
Ensembl chr13:45,314,933...45,318,878
JBrowse link
G Dll4 delta like canonical Notch ligand 4 ISO (MGI:MGI:3056036|PMID:15466159) RGD PMID:15466159 MGI:MGI:3056036 NCBI chr 3:111,135,011...111,146,746
Ensembl chr 3:111,135,021...111,145,986
JBrowse link
G Edn1 endothelin 1 ISO MGI:MGI:1857637 (MGI:MGI:74210|PMID:7615798) RGD PMID:7615798 MGI:MGI:74210 NCBI chr17:22,136,814...22,143,745
Ensembl chr17:22,137,324...22,143,324
JBrowse link
G Ednra endothelin receptor type A ISO
IEA
MGI:MGI:1347481 (MGI:MGI:3606840|PMID:15664398)
GO_REF:0000107
RGD
Ensembl
PMID:15664398 GO_REF:0000107, MGI:MGI:3606840 NCBI chr19:33,928,356...33,991,703
Ensembl chr19:33,928,356...33,991,703
JBrowse link
G Eng endoglin ISO (MGI:MGI:1337912|PMID:10348742) RGD PMID:10348742 MGI:MGI:1337912 NCBI chr 3:11,679,530...11,717,486
Ensembl chr 3:11,679,530...11,717,485
JBrowse link
G Fgf8 fibroblast growth factor 8 ISO MGI:MGI:95668 (MGI:MGI:3588904|PMID:15996652) RGD PMID:15996652 MGI:MGI:3588904 NCBI chr 1:265,492,949...265,498,965
Ensembl chr 1:265,493,124...265,498,831
JBrowse link
G Flt1 Fms related receptor tyrosine kinase 1 ISO MGI:MGI:1857717 (MGI:MGI:3045573|PMID:14982871) RGD PMID:14982871 MGI:MGI:3045573 NCBI chr12:9,033,993...9,205,886
Ensembl chr12:9,034,308...9,205,905
JBrowse link
G Foxc2 forkhead box C2 ISO MGI:MGI:105923 (MGI:MGI:3606840|PMID:15664398) RGD PMID:15664398 MGI:MGI:3606840 NCBI chr19:53,044,379...53,047,081
Ensembl chr19:53,044,379...53,047,081
JBrowse link
G Gbx2 gastrulation brain homeobox 2 ISO MGI:MGI:1857634|MGI:MGI:99604 (MGI:MGI:3588904|PMID:15996652) RGD PMID:15996652 MGI:MGI:3588904 NCBI chr 9:97,063,265...97,065,855
Ensembl chr 9:97,063,728...97,065,817
JBrowse link
G Gdf2 growth differentiation factor 2 ISO (MGI:MGI:4830635|PMID:20406889)
(PMID:20406889)
RGD PMID:20406889 MGI:MGI:4830635 NCBI chr16:10,267,510...10,293,545
Ensembl chr16:10,267,482...10,273,239
JBrowse link
G Gna13 G protein subunit alpha 13 ISO MGI:MGI:2450311|MGI:MGI:3583876 (MGI:MGI:3583513|PMID:15919816) RGD PMID:15919816 MGI:MGI:3583513 NCBI chr10:97,647,196...97,680,030
Ensembl chr10:97,647,111...97,684,730
JBrowse link
G Ihh Indian hedgehog signaling molecule ISO MGI:MGI:1934258 (MGI:MGI:3574706|PMID:15689378) RGD PMID:15689378 MGI:MGI:3574706 NCBI chr 9:82,208,223...82,214,440
Ensembl chr 9:82,208,223...82,214,440
JBrowse link
G Kdr kinase insert domain receptor ISO
IEA
(PMID:23688497)
GO_REF:0000107
RGD
Ensembl
PMID:23688497 GO_REF:0000107 NCBI chr14:34,727,677...34,787,127
Ensembl chr14:34,727,623...34,787,183
JBrowse link
G Lef1 lymphoid enhancer binding factor 1 ISO
IEA
MGI:MGI:1926601 (MGI:MGI:3833040|PMID:19154719)
GO_REF:0000107
RGD
Ensembl
PMID:19154719 GO_REF:0000107, MGI:MGI:3833040 NCBI chr 2:236,232,115...236,345,061
Ensembl chr 2:236,233,239...236,345,056
JBrowse link
G Nfatc3 nuclear factor of activated T-cells 3 ISO MGI:MGI:1920431 (MGI:MGI:2136698|PMID:11439183) RGD PMID:11439183 MGI:MGI:2136698 NCBI chr19:38,039,542...38,114,003
Ensembl chr19:38,039,564...38,114,003
JBrowse link
G Nfatc4 nuclear factor of activated T-cells 4 ISO MGI:MGI:103296 (MGI:MGI:2136698|PMID:11439183) RGD PMID:11439183 MGI:MGI:2136698 NCBI chr15:34,493,163...34,502,238
Ensembl chr15:34,493,138...34,504,326
JBrowse link
G Notch4 notch receptor 4 ISO (MGI:MGI:1934537|PMID:11344305) RGD PMID:11344305 MGI:MGI:1934537 NCBI chr20:4,329,794...4,353,868
Ensembl chr20:4,329,811...4,353,785
JBrowse link
G Nrarp Notch-regulated ankyrin repeat protein ISO
IBA
MGI:MGI:3833551 (MGI:MGI:3833040|PMID:19154719)
PMID:21873635
RGD PMID:19154719, PMID:21873635 MGI:MGI:3833040, RGD:13792537 NCBI chr 3:2,396,143...2,398,697
Ensembl chr 3:2,396,143...2,398,689
JBrowse link
G Nrp1 neuropilin 1 ISO MGI:MGI:3512099 (MGI:MGI:3710026|PMID:17428830), (MGI:MGI:5288256|PMID:21852397), (MGI:MGI:5484470|PMID:23315162), (MGI:MGI:5562961|PMID:24401374) RGD PMID:17428830, PMID:21852397, PMID:23315162, PMID:24401374 MGI:MGI:3710026, MGI:MGI:5288256, MGI:MGI:5484470, MGI:MGI:5562961 NCBI chr19:61,332,351...61,486,166
Ensembl chr19:61,332,351...61,485,858
JBrowse link
G Pitx2 paired-like homeodomain 2 ISO MGI:MGI:2445428 (MGI:MGI:2389284|PMID:12397115) RGD PMID:12397115 MGI:MGI:2389284 NCBI chr 2:233,602,732...233,621,059
Ensembl chr 2:233,602,732...233,621,129
JBrowse link
G Plxnd1 plexin D1 ISO MGI:MGI:3050678|MGI:MGI:5544786 (MGI:MGI:3050159|PMID:15239958), (MGI:MGI:5509072|PMID:23918385) RGD PMID:15239958, PMID:23918385 MGI:MGI:3050159, MGI:MGI:5509072 NCBI chr 4:147,854,309...147,894,170
Ensembl chr 4:147,854,309...147,893,992
JBrowse link
G Ppp3r1 protein phosphatase 3, regulatory subunit B, alpha ISO MGI:MGI:3043986 (MGI:MGI:2136698|PMID:11439183) RGD PMID:11439183 MGI:MGI:2136698 NCBI chr14:100,311,224...100,360,879
Ensembl chr14:100,311,173...100,360,879
JBrowse link
G Rbm15 RNA binding motif protein 15 ISO MGI:MGI:3706995 (MGI:MGI:3833189|PMID:18981216) RGD PMID:18981216 MGI:MGI:3833189 NCBI chr 2:210,079,678...210,090,200
Ensembl chr 2:210,081,770...210,088,949
JBrowse link
G Sema3e semaphorin 3E ISO (MGI:MGI:3526793|PMID:15550623) RGD PMID:15550623 MGI:MGI:3526793 NCBI chr 4:17,314,745...17,594,659
Ensembl chr 4:17,272,511...17,594,598
JBrowse link
G Sema5a semaphorin 5A ISO MGI:MGI:3577050 (MGI:MGI:3575993|PMID:15743826) RGD PMID:15743826 MGI:MGI:3575993 NCBI chr 2:85,377,318...85,808,970
Ensembl chr 2:85,377,318...85,808,970
JBrowse link
G Sfrp2 secreted frizzled-related protein 2 ISO (MGI:MGI:4835126|PMID:19458075) RGD PMID:19458075 MGI:MGI:4835126 NCBI chr 2:182,723,732...182,731,277
Ensembl chr 2:182,723,854...182,731,764
JBrowse link
G Shh sonic hedgehog signaling molecule ISO
ISS
IEA
MGI:MGI:1857796 (MGI:MGI:3583396|PMID:15936751)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:15936751 GO_REF:0000024, GO_REF:0000107, MGI:MGI:3583396 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
G Srf serum response factor ISO (MGI:MGI:3811944|PMID:18804439) RGD PMID:18804439 MGI:MGI:3811944 NCBI chr 9:16,737,637...16,747,226
Ensembl chr 9:16,737,642...16,747,225
JBrowse link
G Stk4 serine/threonine kinase 4 ISO MGI:MGI:1928487 (MGI:MGI:4412133|PMID:19786569) RGD PMID:19786569 MGI:MGI:4412133 NCBI chr 3:160,467,552...160,546,540
Ensembl chr 3:160,467,552...160,546,540
JBrowse link
G Tbx20 T-box transcription factor 20 ISO MGI:MGI:3579836 (MGI:MGI:3578574|PMID:15843414) RGD PMID:15843414 MGI:MGI:3578574 NCBI chr 8:25,849,394...25,904,570
Ensembl chr 8:25,850,962...25,904,570
JBrowse link
G Tgfbr2 transforming growth factor, beta receptor 2 ISO MGI:MGI:2384513|MGI:MGI:2386570 (MGI:MGI:3703113|PMID:17078885) RGD PMID:17078885 MGI:MGI:3703113 NCBI chr 8:124,310,288...124,399,345
Ensembl chr 8:124,312,754...124,399,494
JBrowse link
G Vegfa vascular endothelial growth factor A ISO MGI:MGI:1931047 (MGI:MGI:3710026|PMID:17428830)
(PMID:23083510), (PMID:23688497)
RGD PMID:17428830, PMID:23083510, PMID:23688497 MGI:MGI:3710026 NCBI chr 9:17,340,341...17,355,681
Ensembl chr 9:17,340,341...17,355,681
JBrowse link
branching involved in lymph vessel morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nfatc1 nuclear factor of activated T-cells 1 ISO MGI:MGI:2181762 (MGI:MGI:3848105|PMID:19233265) RGD PMID:19233265 MGI:MGI:3848105 NCBI chr18:77,203,517...77,322,690
Ensembl chr18:77,203,525...77,322,690
JBrowse link
branching involved in mammary gland duct morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07034833.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr12:53,872...54,885 JBrowse link
G AABR07071701.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 8:126,975,833...126,976,850 JBrowse link
G Btrc beta-transducin repeat containing E3 ubiquitin protein ligase ISO MGI:MGI:3055737 (MGI:MGI:3054694|PMID:15340078) RGD PMID:15340078 MGI:MGI:3054694 NCBI chr 1:265,100,094...265,270,263
Ensembl chr 1:265,157,379...265,269,837
JBrowse link
G Ccl11 C-C motif chemokine ligand 11 ISO MGI:MGI:2384435 (MGI:MGI:3640884|PMID:10804170) RGD PMID:10804170 MGI:MGI:3640884 NCBI chr10:69,434,965...69,439,566
Ensembl chr10:69,434,941...69,439,575
JBrowse link
G Csf1 colony stimulating factor 1 ISO MGI:MGI:1856333 (MGI:MGI:3640884|PMID:10804170) RGD PMID:10804170 MGI:MGI:3640884 NCBI chr 2:210,522,370...210,550,546
Ensembl chr 2:210,522,375...210,550,560
JBrowse link
G Ddr1 discoidin domain receptor tyrosine kinase 1 ISO
IEA
MGI:MGI:2388024 (MGI:MGI:1932625|PMID:11283268)
GO_REF:0000107
RGD
Ensembl
PMID:11283268 GO_REF:0000107, MGI:MGI:1932625 NCBI chr20:3,553,430...3,574,959
Ensembl chr20:3,552,929...3,575,780
JBrowse link
G Epha2 Eph receptor A2 ISO (MGI:MGI:5284750|PMID:19321667) RGD PMID:19321667 MGI:MGI:5284750 NCBI chr 5:159,845,773...159,874,203
Ensembl chr 5:159,845,774...159,874,206
JBrowse link
G Etv4 ETS variant transcription factor 4 ISO MGI:MGI:2445834 (MGI:MGI:2667785|PMID:12871699), (MGI:MGI:3828920|PMID:18977342) RGD PMID:12871699, PMID:18977342 MGI:MGI:2667785, MGI:MGI:3828920 NCBI chr10:89,685,058...89,700,300
Ensembl chr10:89,685,058...89,700,283
JBrowse link
G Kdm5b lysine demethylase 5B ISO MGI:MGI:4329395 (MGI:MGI:5619178|PMID:24802759) RGD PMID:24802759 MGI:MGI:5619178 NCBI chr13:51,384,371...51,455,392
Ensembl chr13:51,384,389...51,455,357
JBrowse link
G LOC102554748 nidogen-2-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:380,313...427,615
Ensembl chr 7:380,741...381,732
JBrowse link
G Lrp5 LDL receptor related protein 5 ISO
IBA
MGI:MGI:3663738 (MGI:MGI:3692480|PMID:16973609)
PMID:21873635
RGD PMID:16973609, PMID:21873635 MGI:MGI:3692480, RGD:13792537 NCBI chr 1:218,816,833...218,920,147
Ensembl chr 1:218,816,841...218,920,094
JBrowse link
G Lrp6 LDL receptor related protein 6 ISO
IBA
MGI:MGI:2156191 (MGI:MGI:3849913|PMID:19503830)
PMID:21873635
RGD PMID:19503830, PMID:21873635 MGI:MGI:3849913, RGD:13792537 NCBI chr 4:168,194,054...168,323,962
Ensembl chr 4:168,194,927...168,323,751
JBrowse link
G Msx2 msh homeobox 2 ISO
IEA
MGI:MGI:1926381 (MGI:MGI:1355063|PMID:10742104)
GO_REF:0000107
RGD
Ensembl
PMID:10742104 GO_REF:0000107, MGI:MGI:1355063 NCBI chr17:11,683,862...11,689,527
Ensembl chr17:11,683,862...11,689,527
JBrowse link
G Pml PML nuclear body scaffold ISO MGI:MGI:2429949 (MGI:MGI:3839212|PMID:19261859) RGD PMID:19261859 MGI:MGI:3839212 NCBI chr 8:63,002,515...63,034,310
Ensembl chr 8:63,004,870...63,034,226
JBrowse link
G Slc12a2 solute carrier family 12 member 2 ISO MGI:MGI:1935144 (MGI:MGI:2180693|PMID:8864124) RGD PMID:8864124 MGI:MGI:2180693 NCBI chr18:52,917,124...52,985,281
Ensembl chr18:52,917,124...52,985,261
JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase ISO MGI:MGI:1857247 (MGI:MGI:3589531|PMID:16007215) RGD PMID:16007215 MGI:MGI:3589531 NCBI chr 3:153,547,807...153,595,643
Ensembl chr 3:153,580,861...153,595,642
JBrowse link
G Tbx3 T-box transcription factor 3 ISO MGI:MGI:2655214 (MGI:MGI:3608166|PMID:16222716) RGD PMID:16222716 MGI:MGI:3608166 NCBI chr12:42,479,518...42,494,588
Ensembl chr12:42,480,560...42,492,526
JBrowse link
branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts16 ADAM metallopeptidase with thrombospondin type 1 motif, 16 ISO (MGI:MGI:5504318|PMID:23661704) RGD PMID:23661704 MGI:MGI:5504318 NCBI chr 1:35,067,268...35,200,530
Ensembl chr 1:35,067,490...35,198,939
JBrowse link
G Agt angiotensinogen NOT ISO MGI:MGI:2183545 (MGI:MGI:77583|PMID:8675666)
(MGI:MGI:2655949|PMID:12657564)
RGD PMID:8675666, PMID:12657564 MGI:MGI:2655949, MGI:MGI:77583 NCBI chr19:57,321,594...57,333,460
Ensembl chr19:57,321,640...57,333,433
JBrowse link
G Bcl2 BCL2, apoptosis regulator IEA
ISO
GO_REF:0000107
MGI:MGI:97486 (MGI:MGI:3036971|PMID:14699151), (MGI:MGI:3768986|PMID:16672320)
Ensembl
RGD
PMID:14699151, PMID:16672320 GO_REF:0000107, MGI:MGI:3036971, MGI:MGI:3768986 NCBI chr13:26,605,426...26,769,374
Ensembl chr13:26,605,426...26,769,374
JBrowse link
G Bmp2 bone morphogenetic protein 2 ISO
IEA
MGI:MGI:104903 (MGI:MGI:3583399|PMID:15925496)
GO_REF:0000107
RGD
Ensembl
PMID:15925496 GO_REF:0000107, MGI:MGI:3583399 NCBI chr 3:126,335,963...126,346,771
Ensembl chr 3:126,335,863...126,346,318
JBrowse link
G Bmp4 bone morphogenetic protein 4 ISO
ISS
IEA
MGI:MGI:1344337 (MGI:MGI:3714585|PMID:17522159)
GO_REF:0000024
(PMID:12631064)
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:12631064, PMID:17522159 GO_REF:0000024, GO_REF:0000107, MGI:MGI:3714585 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Cd44 CD44 molecule (Indian blood group) ISO (MGI:MGI:2449954|PMID:10926769) RGD PMID:10926769 MGI:MGI:2449954 NCBI chr 3:92,695,083...92,783,820
Ensembl chr 3:92,696,313...92,783,658
JBrowse link
G Cited1 Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1 NOT IMP
ISO
PMID:15843474
(MGI:MGI:3717986|PMID:17615577)
RGD PMID:17615577, PMID:15843474 MGI:MGI:3717986, RGD:8554075 NCBI chr  X:72,128,996...72,133,692
Ensembl chr  X:72,128,994...72,133,692
JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 NOT ISO (MGI:MGI:3717986|PMID:17615577) RGD PMID:17615577 MGI:MGI:3717986 NCBI chr 1:12,823,363...12,825,806
Ensembl chr 1:12,823,363...12,825,786
JBrowse link
G Ctnnb1 catenin beta 1 ISO
IEA
MGI:MGI:1858008 (MGI:MGI:3714576|PMID:17537789)
GO_REF:0000107
RGD
Ensembl
PMID:17537789 GO_REF:0000107, MGI:MGI:3714576 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Ctnnbip1 catenin, beta-interacting protein 1 ISO MGI:MGI:3045424 (MGI:MGI:3757813|PMID:17803964) RGD PMID:17803964 MGI:MGI:3757813 NCBI chr 5:166,464,170...166,513,030
Ensembl chr 5:166,464,252...166,513,027
JBrowse link
G Dchs1 dachsous cadherin-related 1 ISO MGI:MGI:4867020 (MGI:MGI:4939936|PMID:21303848) RGD PMID:21303848 MGI:MGI:4939936 NCBI chr 1:170,594,981...170,629,062
Ensembl chr 1:170,594,822...170,628,915
JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 IEA
ISO
GO_REF:0000107
MGI:MGI:2680670|MGI:MGI:3699270|MGI:MGI:3710242 (MGI:MGI:3688770|PMID:16105026), (MGI:MGI:3699022|PMID:17172448), (MGI:MGI:3709697|PMID:17435047)
Ensembl
RGD
PMID:16105026, PMID:17172448, PMID:17435047 GO_REF:0000107, MGI:MGI:3688770, MGI:MGI:3699022, MGI:MGI:3709697 NCBI chr11:72,164,566...72,378,895
Ensembl chr11:72,163,749...72,378,895
JBrowse link
G Dspp dentin sialophosphoprotein ISO MGI:MGI:2653208 (MGI:MGI:3686561|PMID:16937369) RGD PMID:16937369 MGI:MGI:3686561 NCBI chr14:6,926,972...6,933,079
Ensembl chr14:6,926,976...6,933,070
JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 ISO
IEA
MGI:MGI:102780 (MGI:MGI:2662002|PMID:12783782)
GO_REF:0000107
RGD
Ensembl
PMID:12783782 GO_REF:0000107, MGI:MGI:2662002 NCBI chr 5:4,275,728...4,495,525
Ensembl chr 5:4,373,626...4,513,142
JBrowse link
G Fat4 FAT atypical cadherin 4 ISO MGI:MGI:3846573 (MGI:MGI:4939936|PMID:21303848) RGD PMID:21303848 MGI:MGI:4939936 NCBI chr 2:125,751,818...125,879,398
Ensembl chr 2:125,752,130...125,879,387
JBrowse link
G Fgf2 fibroblast growth factor 2 ISO
ISS
(PMID:12631064)
GO_REF:0000024
RGD
UniProt
PMID:12631064 GO_REF:0000024 NCBI chr 2:124,081,072...124,134,133
Ensembl chr 2:124,081,072...124,134,681
JBrowse link
G Fgf8 fibroblast growth factor 8 ISO MGI:MGI:2150348 (MGI:MGI:3603080|PMID:16049111) RGD PMID:16049111 MGI:MGI:3603080 NCBI chr 1:265,492,949...265,498,965
Ensembl chr 1:265,493,124...265,498,831
JBrowse link
G Foxd1 forkhead box D1 ISO (MGI:MGI:2675756|PMID:13678594) RGD PMID:13678594 MGI:MGI:2675756 NCBI chr 2:28,460,068...28,462,488
Ensembl chr 2:28,460,068...28,462,488
JBrowse link
G Gdnf glial cell derived neurotrophic factor IEA
ISO
ISS
GO_REF:0000107
(MGI:MGI:2675756|PMID:13678594), (MGI:MGI:4949995|PMID:21281623), (MGI:MGI:81287|PMID:8657307)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:8657307, PMID:13678594, PMID:21281623 GO_REF:0000024, GO_REF:0000107, MGI:MGI:2675756, MGI:MGI:4949995, MGI:MGI:81287 NCBI chr 2:56,884,181...56,912,964
Ensembl chr 2:56,887,987...56,910,238
JBrowse link
G Gli3 GLI family zinc finger 3 ISO MGI:MGI:98297 (MGI:MGI:3611729|PMID:16396903) RGD PMID:16396903 MGI:MGI:3611729 NCBI chr17:52,294,942...52,569,036
Ensembl chr17:52,294,942...52,569,036
JBrowse link
G Gpc3 glypican 3 ISO
IEA
MGI:MGI:88177|MGI:MGI:894293 (MGI:MGI:3583399|PMID:15925496)
GO_REF:0000107
RGD
Ensembl
PMID:15925496 GO_REF:0000107, MGI:MGI:3583399 NCBI chr  X:139,579,268...139,947,093
Ensembl chr  X:139,579,268...139,916,883
JBrowse link
G Greb1l GREB1 like retinoic acid receptor coactivator ISO (MGI:MGI:6094060|PMID:29100091) RGD PMID:29100091 MGI:MGI:6094060 NCBI chr18:1,537,315...1,784,260
Ensembl chr18:1,723,565...1,784,233
JBrowse link
G Gzf1 GDNF-inducible zinc finger protein 1 ISO (MGI:MGI:2683817|PMID:14522971) RGD PMID:14522971 MGI:MGI:2683817 NCBI chr 3:143,003,706...143,015,906
Ensembl chr 3:143,003,796...143,015,904
JBrowse link
G Hoxa11 homeobox A11 ISO MGI:MGI:96203 (MGI:MGI:2135652|PMID:11493536) RGD PMID:11493536 MGI:MGI:2135652 NCBI chr 4:82,296,888...82,301,419
Ensembl chr 4:82,298,152...82,300,503
Ensembl chr 4:82,298,152...82,300,503
JBrowse link
G Hoxd11 homeobox D11 ISO MGI:MGI:96172 (MGI:MGI:2135652|PMID:11493536) RGD PMID:11493536 MGI:MGI:2135652 NCBI chr 3:61,604,256...61,606,874
Ensembl chr 3:61,604,672...61,606,400
JBrowse link
G Ilk integrin-linked kinase ISO (MGI:MGI:3575981|PMID:15831470) RGD PMID:15831470 MGI:MGI:3575981 NCBI chr 1:170,578,941...170,585,192
Ensembl chr 1:170,578,889...170,585,189
JBrowse link
G Lama5 laminin subunit alpha 5 ISO (MGI:MGI:2678847|PMID:14568553) RGD PMID:14568553 MGI:MGI:2678847 NCBI chr 3:175,553,042...175,601,112
Ensembl chr 3:175,553,045...175,601,127
JBrowse link
G Lhx1 LIM homeobox 1 ISO (PMID:7909549) RGD PMID:7909549 NCBI chr10:71,843,991...71,849,293
Ensembl chr10:71,843,991...71,849,293
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor ISO
ISS
(MGI:MGI:3830398|PMID:19161241)
GO_REF:0000024
RGD
UniProt
PMID:19161241 GO_REF:0000024, MGI:MGI:3830398 NCBI chr 7:102,586,313...102,591,240
Ensembl chr 7:102,586,313...102,591,240
JBrowse link
G Npnt nephronectin ISO
IEA
MGI:MGI:3715213 (MGI:MGI:3714574|PMID:17537792)
GO_REF:0000107
RGD
Ensembl
PMID:17537792 GO_REF:0000107, MGI:MGI:3714574 NCBI chr 2:238,001,767...238,068,886
Ensembl chr 2:238,002,990...238,068,694
JBrowse link
G Pax2 paired box 2 ISO
ISS
MGI:MGI:1857114|MGI:MGI:88138 (MGI:MGI:3768986|PMID:16672320)
GO_REF:0000024
(PMID:1337742)
RGD
UniProt
PMID:1337742, PMID:16672320 GO_REF:0000024, MGI:MGI:3768986 NCBI chr 1:264,493,579...264,585,073
Ensembl chr 1:264,504,591...264,583,329
JBrowse link
G Pax8 paired box 8 ISO (PMID:1337742) RGD PMID:1337742 NCBI chr 3:1,527,316...1,586,019
Ensembl chr 3:1,527,279...1,584,946
JBrowse link
G Pbx1 PBX homeobox 1 ISO (MGI:MGI:2451200|PMID:12591246) RGD PMID:12591246 MGI:MGI:2451200 NCBI chr13:86,390,741...86,671,460
Ensembl chr13:86,390,741...86,451,002
JBrowse link
G Pgf placental growth factor ISO (MGI:MGI:2675756|PMID:13678594) RGD PMID:13678594 MGI:MGI:2675756 NCBI chr 6:108,994,016...109,004,598
Ensembl chr 6:108,994,018...109,004,598
JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel ISO (PMID:11891195) RGD PMID:11891195 NCBI chr14:6,602,004...6,645,257
Ensembl chr14:6,602,004...6,645,257
JBrowse link
G Pspn persephin ISO (MGI:MGI:1196665|PMID:9491986) RGD PMID:9491986 MGI:MGI:1196665 NCBI chr 9:10,044,756...10,045,314
Ensembl chr 9:10,044,756...10,045,314
JBrowse link
G Ptch1 patched 1 ISO MGI:MGI:1857447 (MGI:MGI:4367286|PMID:19809516) RGD PMID:19809516 MGI:MGI:4367286 NCBI chr17:1,032,242...1,085,885
Ensembl chr17:1,029,048...1,093,873
JBrowse link
G Sall1 spalt-like transcription factor 1 ISO (MGI:MGI:2447943|PMID:12482961) RGD PMID:12482961 MGI:MGI:2447943 NCBI chr19:23,387,737...23,405,025
Ensembl chr19:23,389,375...23,405,039
JBrowse link
G Shh sonic hedgehog signaling molecule ISO
ISS
IEA
MGI:MGI:1857796 (MGI:MGI:3611729|PMID:16396903)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:16396903 GO_REF:0000024, GO_REF:0000107, MGI:MGI:3611729 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
G Six1 SIX homeobox 1 ISO MGI:MGI:109344 (MGI:MGI:2662002|PMID:12783782) RGD PMID:12783782 MGI:MGI:2662002 NCBI chr 6:95,929,060...95,934,296
Ensembl chr 6:95,929,060...95,934,296
JBrowse link
G Smad4 SMAD family member 4 ISO
IEA
MGI:MGI:104903|MGI:MGI:88177 (MGI:MGI:3583399|PMID:15925496)
GO_REF:0000107
RGD
Ensembl
PMID:15925496 GO_REF:0000107, MGI:MGI:3583399 NCBI chr18:69,626,682...69,657,373
Ensembl chr18:69,627,757...69,671,199
JBrowse link
G Sox9 SRY-box transcription factor 9 ISO (PMID:8787755) RGD PMID:8787755 NCBI chr10:101,288,528...101,294,030
Ensembl chr10:101,288,489...101,293,379
JBrowse link
G Tcf21 transcription factor 21 ISS
ISO
GO_REF:0000024
MGI:MGI:2148207 (MGI:MGI:1202620|PMID:9507058), (MGI:MGI:1347485|PMID:10572052)
UniProt
RGD
PMID:9507058, PMID:10572052 GO_REF:0000024, MGI:MGI:1202620, MGI:MGI:1347485 NCBI chr 1:23,906,717...23,909,576
Ensembl chr 1:23,906,717...23,909,566
JBrowse link
G Timeless timeless circadian regulator IMP RGD PMID:10963667 RGD:2308864 NCBI chr 7:2,643,288...2,667,329
Ensembl chr 7:2,643,288...2,667,628
JBrowse link
G Wnt1 Wnt family member 1 ISO MGI:MGI:1197020 (MGI:MGI:3588895|PMID:16054034) RGD PMID:16054034 MGI:MGI:3588895 NCBI chr 7:140,464,999...140,469,046
Ensembl chr 7:140,464,999...140,469,046
JBrowse link
G Wnt4 Wnt family member 4 ISO
IEA
(MGI:MGI:3588895|PMID:16054034)
GO_REF:0000107
RGD
Ensembl
PMID:16054034 GO_REF:0000107, MGI:MGI:3588895 NCBI chr 5:155,649,238...155,668,065
Ensembl chr 5:155,649,217...155,672,579
JBrowse link
G Wnt6 Wnt family member 6 ISO UniProtKB:P22724 (MGI:MGI:2178881|PMID:11948913) RGD PMID:11948913 MGI:MGI:2178881 NCBI chr 9:82,033,543...82,047,172
Ensembl chr 9:82,033,543...82,047,166
JBrowse link
G Wnt9b Wnt family member 9B ISO MGI:MGI:3526437|MGI:MGI:98953 (MGI:MGI:3588895|PMID:16054034) RGD PMID:16054034 MGI:MGI:3588895 NCBI chr10:91,785,892...91,808,061
Ensembl chr10:91,785,893...91,807,937
JBrowse link
G Wt1 WT1 transcription factor ISO
IEA
ISS
UniProtKB:P22561 (PMID:10101119)
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:1333093|PMID:10101119)
RGD
Ensembl
UniProt
PMID:10101119 GO_REF:0000024, GO_REF:0000107, MGI:MGI:1333093 NCBI chr 3:95,133,221...95,180,574
Ensembl chr 3:95,133,713...95,180,564
JBrowse link
bud dilation involved in lung branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 ISO
IEA
(PMID:8674409)
GO_REF:0000107
RGD
Ensembl
PMID:8674409 GO_REF:0000107 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
bud elongation involved in lung branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 ISO
IEA
(MGI:MGI:3788965|PMID:18367557)
GO_REF:0000107
RGD
Ensembl
PMID:18367557 GO_REF:0000107, MGI:MGI:3788965 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Fgf10 fibroblast growth factor 10 ISO MGI:MGI:1345138|MGI:MGI:1345139 (MGI:MGI:5052190|PMID:21764747) RGD PMID:21764747 MGI:MGI:5052190 NCBI chr 2:51,673,480...51,747,533
Ensembl chr 2:51,672,722...51,750,369
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 ISO MGI:MGI:3629660 (MGI:MGI:3688953|PMID:16989802) RGD PMID:16989802 MGI:MGI:3688953 NCBI chr 1:200,590,951...200,696,946
Ensembl chr 1:200,590,953...200,696,928
JBrowse link
G Rdh10 retinol dehydrogenase 10 ISO (MGI:MGI:3709664|PMID:17473173) RGD PMID:17473173 MGI:MGI:3709664 NCBI chr 5:2,605,265...2,631,905
Ensembl chr 5:2,603,505...2,632,030
JBrowse link
G Spry1 sprouty RTK signaling antagonist 1 ISO MGI:MGI:1099809|MGI:MGI:1345138 (MGI:MGI:5052190|PMID:21764747) RGD PMID:21764747 MGI:MGI:5052190 NCBI chr 2:124,400,689...124,405,331
Ensembl chr 2:124,400,679...124,405,331
JBrowse link
G Spry2 sprouty RTK signaling antagonist 2 ISO MGI:MGI:1099809|MGI:MGI:1345139 (MGI:MGI:5052190|PMID:21764747) RGD PMID:21764747 MGI:MGI:5052190 NCBI chr15:90,172,769...90,177,823
Ensembl chr15:90,172,975...90,175,802
JBrowse link
G Yap1 Yes1 associated transcriptional regulator ISO MGI:MGI:3053959|MGI:MGI:5316446 (MGI:MGI:5586932|PMID:25043473) RGD PMID:25043473 MGI:MGI:5586932 NCBI chr 8:6,133,014...6,204,240
Ensembl chr 8:6,135,493...6,203,579
JBrowse link
bud outgrowth involved in lung branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 ISO (PMID:9740653) RGD PMID:9740653 NCBI chr 2:51,673,480...51,747,533
Ensembl chr 2:51,672,722...51,750,369
JBrowse link
G Shh sonic hedgehog signaling molecule ISO
IEA
MGI:MGI:1857796 (MGI:MGI:1277744|PMID:9731532)
GO_REF:0000107
RGD
Ensembl
PMID:9731532 GO_REF:0000107, MGI:MGI:1277744 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
G Tmtc3 transmembrane O-mannosyltransferase targeting cadherins 3 ISO MGI:MGI:4124060 (MGI:MGI:5300435|PMID:21956870) RGD PMID:21956870 MGI:MGI:5300435 NCBI chr 7:40,171,957...40,217,056
Ensembl chr 7:40,171,963...40,217,056
JBrowse link
G Tnc tenascin C IMP RGD PMID:16928692 RGD:4889612 NCBI chr 5:79,789,686...79,874,555
Ensembl chr 5:79,789,671...79,874,671
JBrowse link
dichotomous subdivision of terminal units involved in lung branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctsh cathepsin H ISO
ISS
(MGI:MGI:3722010|PMID:17500053)
GO_REF:0000024
RGD
UniProt
PMID:17500053 GO_REF:0000024, MGI:MGI:3722010 NCBI chr 8:97,439,155...97,458,293
Ensembl chr 8:97,439,161...97,458,287
JBrowse link
dichotomous subdivision of terminal units involved in mammary gland duct morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Areg amphiregulin ISO MGI:MGI:2176531 (MGI:MGI:3703920|PMID:17369357) RGD PMID:17369357 MGI:MGI:3703920 NCBI chr14:18,521,921...18,531,179
Ensembl chr14:18,521,930...18,531,179
JBrowse link
G Tfap2c transcription factor AP-2 gamma ISO MGI:MGI:3040993 (MGI:MGI:4422106|PMID:20131354) RGD PMID:20131354 MGI:MGI:4422106 NCBI chr 3:170,550,314...170,558,197
Ensembl chr 3:170,550,314...170,558,194
JBrowse link
dichotomous subdivision of terminal units involved in ureteric bud branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxd1 forkhead box D1 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:3525902|PMID:15634693)
Ensembl
UniProt
RGD
PMID:15634693 GO_REF:0000024, GO_REF:0000107, MGI:MGI:3525902 NCBI chr 2:28,460,068...28,462,488
Ensembl chr 2:28,460,068...28,462,488
JBrowse link
epithelial cell proliferation involved in mammary gland duct elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Areg amphiregulin ISO MGI:MGI:2176531 (MGI:MGI:3703920|PMID:17369357) RGD PMID:17369357 MGI:MGI:3703920 NCBI chr14:18,521,921...18,531,179
Ensembl chr14:18,521,930...18,531,179
JBrowse link
G Esr1 estrogen receptor 1 ISO
IEA
MGI:MGI:2150897 (MGI:MGI:3629536|PMID:12021201)
GO_REF:0000107
RGD
Ensembl
PMID:12021201 GO_REF:0000107, MGI:MGI:3629536 NCBI chr 1:41,192,029...41,594,799
Ensembl chr 1:41,192,824...41,594,796
JBrowse link
G Med1 mediator complex subunit 1 ISO MGI:MGI:3511276 (MGI:MGI:3576991|PMID:15647257) RGD PMID:15647257 MGI:MGI:3576991 NCBI chr10:86,101,560...86,145,271
Ensembl chr10:86,103,600...86,144,880
JBrowse link
G Tfap2c transcription factor AP-2 gamma ISO MGI:MGI:3040993 (MGI:MGI:4422106|PMID:20131354) RGD PMID:20131354 MGI:MGI:4422106 NCBI chr 3:170,550,314...170,558,197
Ensembl chr 3:170,550,314...170,558,194
JBrowse link
G Wnt5a Wnt family member 5A ISO
IEA
(MGI:MGI:3761053|PMID:17898001)
GO_REF:0000107
RGD
Ensembl
PMID:17898001 GO_REF:0000107, MGI:MGI:3761053 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
JBrowse link
epithelial tube branching involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 IEP
ISO
(PMID:8674409) RGD PMID:8674409, PMID:8769111 RGD:2306315 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Ctnnb1 catenin beta 1 ISO
IEA
MGI:MGI:2148567 (MGI:MGI:3773938|PMID:18231602)
GO_REF:0000107
RGD
Ensembl
PMID:18231602 GO_REF:0000107, MGI:MGI:3773938 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Ctsd cathepsin D NOT ISO (MGI:MGI:3722010|PMID:17500053) RGD PMID:17500053 MGI:MGI:3722010 NCBI chr 1:215,541,570...215,553,446
Ensembl chr 1:215,541,542...215,553,451
JBrowse link
G Ctsl cathepsin L NOT ISO (MGI:MGI:3722010|PMID:17500053) RGD PMID:17500053 MGI:MGI:3722010 NCBI chr17:1,873,105...1,879,266
Ensembl chr17:1,872,848...1,879,279
JBrowse link
G Ctsz cathepsin Z ISO (PMID:17500053) RGD PMID:17500053 NCBI chr 3:172,527,107...172,537,877
Ensembl chr 3:172,527,107...172,537,877
JBrowse link
G Dag1 dystroglycan 1 ISO (MGI:MGI:2156962|PMID:11798066) RGD PMID:11798066 MGI:MGI:2156962 NCBI chr 8:116,980,501...116,993,182
Ensembl chr 8:116,980,497...116,993,193
JBrowse link
G Dlg5 discs large MAGUK scaffold protein 5 ISO MGI:MGI:3757646 (MGI:MGI:5487693|PMID:23466739) RGD PMID:23466739 MGI:MGI:5487693 NCBI chr15:120,213...230,312
Ensembl chr15:120,372...228,977
JBrowse link
G Esrp1 epithelial splicing regulatory protein 1 ISO MGI:MGI:1924661 (MGI:MGI:5699497|PMID:26371508) RGD PMID:26371508 MGI:MGI:5699497 NCBI chr 5:24,576,988...24,631,758
Ensembl chr 5:24,576,991...24,631,698
JBrowse link
G Esrp2 epithelial splicing regulatory protein 2 ISO
IEA
MGI:MGI:1917326 (MGI:MGI:5699497|PMID:26371508)
GO_REF:0000107
RGD
Ensembl
PMID:26371508 GO_REF:0000107, MGI:MGI:5699497 NCBI chr19:38,113,412...38,120,578
Ensembl chr19:38,113,412...38,120,578
JBrowse link
G Ext1 exostosin glycosyltransferase 1 ISO (MGI:MGI:5912649|PMID:28859094) RGD PMID:28859094 MGI:MGI:5912649 NCBI chr 7:92,605,008...92,881,392
Ensembl chr 7:92,605,728...92,882,068
JBrowse link
G Fgf10 fibroblast growth factor 10 ISO MGI:MGI:1859647|MGI:MGI:1927833|MGI:MGI:3629660 (MGI:MGI:1101385|PMID:9428423), (MGI:MGI:1309706|PMID:9784490), (MGI:MGI:1327513|PMID:9916808), (MGI:MGI:3578606|PMID:15800000), (MGI:MGI:3609523|PMID:16169547), (MGI:MGI:3613102|PMID:16375885), (MGI:MGI:3716020|PMID:17560563) RGD PMID:9428423, PMID:9784490, PMID:9916808, PMID:15800000, PMID:16169547, PMID:16375885, PMID:17560563 MGI:MGI:1101385, MGI:MGI:1309706, MGI:MGI:1327513, MGI:MGI:3578606, MGI:MGI:3609523, MGI:MGI:3613102, MGI:MGI:3716020 NCBI chr 2:51,673,480...51,747,533
Ensembl chr 2:51,672,722...51,750,369
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 ISO MGI:MGI:3044679 (MGI:MGI:5523405|PMID:24058167) RGD PMID:24058167 MGI:MGI:5523405 NCBI chr 1:200,590,951...200,696,946
Ensembl chr 1:200,590,953...200,696,928
JBrowse link
G Foxa1 forkhead box A1 ISO
IEA
MGI:MGI:1347476 (MGI:MGI:3579763|PMID:15668254)
GO_REF:0000107
RGD
Ensembl
PMID:15668254 GO_REF:0000107, MGI:MGI:3579763 NCBI chr 6:78,516,579...78,549,669
Ensembl chr 6:78,545,804...78,549,669
JBrowse link
G Foxa2 forkhead box A2 ISO MGI:MGI:1347472 (MGI:MGI:3579763|PMID:15668254) RGD PMID:15668254 MGI:MGI:3579763 NCBI chr 3:142,383,084...142,387,493
Ensembl chr 3:142,383,278...142,387,481
JBrowse link
G Foxf1 forkhead box F1 ISO MGI:MGI:1929432 (MGI:MGI:2135612|PMID:11493558) RGD PMID:11493558 MGI:MGI:2135612 NCBI chr19:53,012,306...53,016,100
Ensembl chr19:53,012,332...53,016,086
JBrowse link
G Hhip Hedgehog-interacting protein ISO MGI:MGI:2450891 (MGI:MGI:2450020|PMID:12569124) RGD PMID:12569124 MGI:MGI:2450020 NCBI chr19:31,525,134...31,614,487
Ensembl chr19:31,524,671...31,614,246
JBrowse link
G Hmga2 high mobility group AT-hook 2 ISO (MGI:MGI:5638831|PMID:24661562) RGD PMID:24661562 MGI:MGI:5638831 NCBI chr 7:65,159,944...65,275,408
Ensembl chr 7:65,159,944...65,275,408
JBrowse link
G Hoxa5 homeo box A5 ISO MGI:MGI:2150397 (MGI:MGI:1195049|PMID:9441679) RGD PMID:9441679 MGI:MGI:1195049
G Kras KRAS proto-oncogene, GTPase ISO MGI:MGI:98371 (MGI:MGI:5523405|PMID:24058167) RGD PMID:24058167 MGI:MGI:5523405 NCBI chr 4:179,482,562...179,515,483
Ensembl chr 4:179,486,105...179,515,558
JBrowse link
G Lama1 laminin subunit alpha 1 ISO (MGI:MGI:2156962|PMID:11798066), (MGI:MGI:80991|PMID:1907584) RGD PMID:1907584, PMID:11798066 MGI:MGI:2156962, MGI:MGI:80991 NCBI chr 9:115,916,907...116,042,123
Ensembl chr 9:115,916,907...116,042,123
JBrowse link
G Nkx2-1 NK2 homeobox 1 IEA
ISO
GO_REF:0000107
(PMID:8675988)
Ensembl
RGD
PMID:8675988 GO_REF:0000107 NCBI chr 6:77,418,096...77,423,383
Ensembl chr 6:77,418,096...77,421,286
JBrowse link
G Rspo2 R-spondin 2 ISO MGI:MGI:3045965 (MGI:MGI:3774879|PMID:18256198) RGD PMID:18256198 MGI:MGI:3774879 NCBI chr 7:81,919,911...82,059,659
Ensembl chr 7:81,924,050...82,059,789
JBrowse link
G Shh sonic hedgehog signaling molecule IEP
ISO
MGI:MGI:1857796 (MGI:MGI:1277744|PMID:9731532), (MGI:MGI:1346236|PMID:10500184) RGD PMID:9731532, PMID:10500184, PMID:8769111 MGI:MGI:1277744, MGI:MGI:1346236, RGD:2306315 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
G Sox2 SRY-box transcription factor 2 ISO (MGI:MGI:3795352|PMID:18374910) RGD PMID:18374910 MGI:MGI:3795352 NCBI chr 2:121,165,137...121,167,545
Ensembl chr 2:121,165,137...121,167,545
JBrowse link
G Sox9 SRY-box transcription factor 9 ISO MGI:MGI:2385468|MGI:MGI:96680 (MGI:MGI:5523405|PMID:24058167) RGD PMID:24058167 MGI:MGI:5523405 NCBI chr10:101,288,528...101,294,030
Ensembl chr10:101,288,489...101,293,379
JBrowse link
lateral sprouting involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Celsr1 cadherin, EGF LAG seven-pass G-type receptor 1 ISO MGI:MGI:2668337 (MGI:MGI:4452277|PMID:20223754) RGD PMID:20223754 MGI:MGI:4452277 NCBI chr 7:126,774,010...126,914,085
Ensembl chr 7:126,775,516...126,913,585
JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 ISO MGI:MGI:1857642 (MGI:MGI:4452277|PMID:20223754) RGD PMID:20223754 MGI:MGI:4452277 NCBI chr13:90,379,203...90,405,627
Ensembl chr13:90,380,632...90,405,591
JBrowse link
lateral sprouting involved in mammary gland duct morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ar androgen receptor ISO
IEA
MGI:MGI:2687199 (MGI:MGI:2683859|PMID:14676301)
GO_REF:0000107
RGD
Ensembl
PMID:14676301 GO_REF:0000107, MGI:MGI:2683859 NCBI chr  X:67,656,253...67,828,998
Ensembl chr  X:67,656,253...67,829,026
JBrowse link
G Wnt5a Wnt family member 5A ISO
IEA
(MGI:MGI:3761053|PMID:17898001)
GO_REF:0000107
RGD
Ensembl
PMID:17898001 GO_REF:0000107, MGI:MGI:3761053 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
JBrowse link
lung induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 IEA
ISO
GO_REF:0000107
MGI:MGI:2148567|MGI:MGI:2148569 (MGI:MGI:4360856|PMID:19686689), (MGI:MGI:4361775|PMID:19805295)
Ensembl
RGD
PMID:19686689, PMID:19805295 GO_REF:0000107, MGI:MGI:4360856, MGI:MGI:4361775 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Wnt2 Wnt family member 2 ISO MGI:MGI:1261834 (MGI:MGI:4360856|PMID:19686689) RGD PMID:19686689 MGI:MGI:4360856 NCBI chr 4:45,286,845...45,332,899
Ensembl chr 4:45,292,437...45,332,420
JBrowse link
G Wnt2b Wnt family member 2B ISO MGI:MGI:98954 (MGI:MGI:4360856|PMID:19686689) RGD PMID:19686689 MGI:MGI:4360856 NCBI chr 2:207,433,771...207,457,094
Ensembl chr 2:207,440,886...207,455,258
JBrowse link
mammary gland branching involved in pregnancy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Csmd1 CUB and Sushi multiple domains 1 ISO MGI:MGI:5473214 (MGI:MGI:6369467|PMID:31604923) RGD PMID:31604923 MGI:MGI:6369467 NCBI chr16:77,152,823...78,850,222
Ensembl chr16:78,539,489...78,850,222
JBrowse link
G Esr1 estrogen receptor 1 ISO
IEA
MGI:MGI:2150897 (MGI:MGI:1926565|PMID:10919287)
GO_REF:0000107
RGD
Ensembl
PMID:10919287 GO_REF:0000107, MGI:MGI:1926565 NCBI chr 1:41,192,029...41,594,799
Ensembl chr 1:41,192,824...41,594,796
JBrowse link
G Med1 mediator complex subunit 1 ISO MGI:MGI:3511276 (MGI:MGI:3576991|PMID:15647257) RGD PMID:15647257 MGI:MGI:3576991 NCBI chr10:86,101,560...86,145,271
Ensembl chr10:86,103,600...86,144,880
JBrowse link
G Vdr vitamin D receptor ISO
IEA
MGI:MGI:2183404 (MGI:MGI:3051725|PMID:15178742)
GO_REF:0000107
RGD
Ensembl
PMID:15178742 GO_REF:0000107, MGI:MGI:3051725 NCBI chr 7:139,344,452...139,394,138
Ensembl chr 7:139,342,063...139,394,166
JBrowse link
mammary gland branching involved in thelarche term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Areg amphiregulin ISO MGI:MGI:2176531 (MGI:MGI:1336843|PMID:10331984), (MGI:MGI:3703920|PMID:17369357) RGD PMID:10331984, PMID:17369357 MGI:MGI:1336843, MGI:MGI:3703920 NCBI chr14:18,521,921...18,531,179
Ensembl chr14:18,521,930...18,531,179
JBrowse link
G Med1 mediator complex subunit 1 ISO MGI:MGI:3511276 (MGI:MGI:3576991|PMID:15647257) RGD PMID:15647257 MGI:MGI:3576991 NCBI chr10:86,101,560...86,145,271
Ensembl chr10:86,103,600...86,144,880
JBrowse link
G Ncoa3 nuclear receptor coactivator 3 ISO MGI:MGI:1931860 (MGI:MGI:1859522|PMID:11015591) RGD PMID:11015591 MGI:MGI:1859522 NCBI chr 3:162,692,176...162,788,582
Ensembl chr 3:162,692,185...162,787,548
JBrowse link
G Phb2 prohibitin 2 ISO MGI:MGI:3574361 (MGI:MGI:3695669|PMID:17065319) RGD PMID:17065319 MGI:MGI:3695669 NCBI chr 4:157,230,769...157,235,375
Ensembl chr 4:157,230,769...157,235,367
JBrowse link
G Tgfb1 transforming growth factor, beta 1 ISO MGI:MGI:1857258 (MGI:MGI:3814777|PMID:18614704) RGD PMID:18614704 MGI:MGI:3814777 NCBI chr 1:82,480,875...82,497,196
Ensembl chr 1:82,480,195...82,497,199
JBrowse link
G Wnt5a Wnt family member 5A ISO
IEA
(MGI:MGI:3761053|PMID:17898001)
GO_REF:0000107
RGD
Ensembl
PMID:17898001 GO_REF:0000107, MGI:MGI:3761053 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
JBrowse link
negative regulation of branch elongation involved in ureteric bud branching by BMP signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 IEA
ISO
ISS
GO_REF:0000107
(PMID:10706139), (PMID:17118062)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:10706139, PMID:17118062 GO_REF:0000024, GO_REF:0000107 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
negative regulation of branching involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tnf tumor necrosis factor ISO (PMID:17350185) RGD PMID:17350185 NCBI chr20:5,189,382...5,192,000
Ensembl chr20:5,189,390...5,192,000
JBrowse link
negative regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 ISS
ISO
GO_REF:0000024
MGI:MGI:102780 (MGI:MGI:3525902|PMID:15634693), (MGI:MGI:4949995|PMID:21281623)
(PMID:12141440), (PMID:17118062)
UniProt
RGD
PMID:12141440, PMID:15634693, PMID:17118062, PMID:21281623 GO_REF:0000024, MGI:MGI:3525902, MGI:MGI:4949995 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Tacstd2 tumor-associated calcium signal transducer 2 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:5315060|PMID:22194864)
Ensembl
UniProt
RGD
PMID:22194864 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5315060 NCBI chr 4:98,341,187...98,342,887
Ensembl chr 4:98,341,188...98,342,887
JBrowse link
orthogonal dichotomous subdivision of terminal units involved in lung branching morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Celsr1 cadherin, EGF LAG seven-pass G-type receptor 1 ISO MGI:MGI:2668337 (MGI:MGI:4452277|PMID:20223754) RGD PMID:20223754 MGI:MGI:4452277 NCBI chr 7:126,774,010...126,914,085
Ensembl chr 7:126,775,516...126,913,585
JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 ISO MGI:MGI:1857642 (MGI:MGI:4452277|PMID:20223754) RGD PMID:20223754 MGI:MGI:4452277 NCBI chr13:90,379,203...90,405,627
Ensembl chr13:90,380,632...90,405,591
JBrowse link
planar dichotomous subdivision of terminal units involved in lung branching morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Celsr1 cadherin, EGF LAG seven-pass G-type receptor 1 ISO MGI:MGI:2668337 (MGI:MGI:4452277|PMID:20223754) RGD PMID:20223754 MGI:MGI:4452277 NCBI chr 7:126,774,010...126,914,085
Ensembl chr 7:126,775,516...126,913,585
JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 ISO MGI:MGI:1857642 (MGI:MGI:4452277|PMID:20223754) RGD PMID:20223754 MGI:MGI:4452277 NCBI chr13:90,379,203...90,405,627
Ensembl chr13:90,380,632...90,405,591
JBrowse link
positive regulation blood vessel branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase ISO (MGI:MGI:5588737|PMID:24863063) RGD PMID:24863063 MGI:MGI:5588737 NCBI chr 3:10,041,820...10,145,076
Ensembl chr 3:10,041,826...10,144,388
JBrowse link
G Mdk midkine ISS
ISO
GO_REF:0000024
(PMID:19060126)
UniProt
RGD
PMID:19060126 GO_REF:0000024 NCBI chr 3:80,841,003...80,843,895
Ensembl chr 3:80,841,005...80,842,916
JBrowse link
G Sirt6 sirtuin 6 ISO (PMID:23201774) RGD PMID:23201774 NCBI chr 7:10,937,622...10,943,048
Ensembl chr 7:10,937,599...10,943,063
JBrowse link
positive regulation of branching involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:4456940|PMID:17350185)
Ensembl
UniProt
RGD
PMID:17350185 GO_REF:0000024, GO_REF:0000107, MGI:MGI:4456940 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Ctnnb1 catenin beta 1 ISO MGI:MGI:2148567 (MGI:MGI:3801531|PMID:18533146) RGD PMID:18533146 MGI:MGI:3801531 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Pdgfra platelet derived growth factor receptor alpha IMP RGD PMID:8879189 RGD:11087558 NCBI chr14:35,527,926...35,581,130
Ensembl chr14:35,527,927...35,581,031
JBrowse link
positive regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen ISO (PMID:18607644) RGD PMID:18607644 NCBI chr19:57,321,594...57,333,460
Ensembl chr19:57,321,640...57,333,433
JBrowse link
G Agtr1a angiotensin II receptor, type 1a IMP PMID:17537984 UniProt PMID:17537984 RGD:1643596 NCBI chr17:35,907,102...35,958,136
Ensembl chr17:35,907,108...35,958,077
JBrowse link
G Agtr1b angiotensin II receptor, type 1b IMP PMID:17537984 UniProt PMID:17537984 RGD:1643596 NCBI chr 2:105,149,020...105,224,335
Ensembl chr 2:105,149,020...105,224,295
JBrowse link
G Agtr2 angiotensin II receptor, type 2 IMP
ISO
PMID:17537984
(MGI:MGI:3808848|PMID:18607644)
RGD PMID:18607644, PMID:17537984 MGI:MGI:3808848, RGD:1643596 NCBI chr  X:119,389,480...119,393,845
Ensembl chr  X:119,390,013...119,393,842
JBrowse link
G Bmp4 bone morphogenetic protein 4 IMP PMID:17537984 UniProt PMID:17537984 RGD:1643596 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Gdnf glial cell derived neurotrophic factor IMP
IBA
ISO
IEA
IDA
PMID:17537984
PMID:21873635
(PMID:17229286), (PMID:8657307)
(MGI:MGI:5284782|PMID:17229286)
GO_REF:0000107
PMID:17522159
RGD
Ensembl
PMID:8657307, PMID:17229286, PMID:17537984, PMID:21873635, PMID:17522159 GO_REF:0000107, MGI:MGI:5284782, RGD:1643596, RGD:13792537, RGD:8656002 NCBI chr 2:56,884,181...56,912,964
Ensembl chr 2:56,887,987...56,910,238
JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist ISO MGI:MGI:88180 (MGI:MGI:3714585|PMID:17522159), (MGI:MGI:4949995|PMID:21281623) RGD PMID:17522159, PMID:21281623 MGI:MGI:3714585, MGI:MGI:4949995 NCBI chr 3:105,203,309...105,214,989
Ensembl chr 3:105,203,309...105,214,989
JBrowse link
G Hoxb7 homeo box B7 ISO (MGI:MGI:3833510|PMID:17881463) RGD PMID:17881463 MGI:MGI:3833510 NCBI chr10:84,135,224...84,138,642
Ensembl chr10:84,135,116...84,138,637
JBrowse link
G Lgr4 leucine-rich repeat-containing G protein-coupled receptor 4 ISO (MGI:MGI:5006869|PMID:21523854) RGD PMID:21523854 MGI:MGI:5006869 NCBI chr 3:101,051,960...101,152,119
Ensembl chr 3:101,051,955...101,152,119
JBrowse link
G Lhx1 LIM homeobox 1 ISO
ISS
(MGI:MGI:3613206|PMID:16216236)
GO_REF:0000024
RGD
UniProt
PMID:16216236 GO_REF:0000024, MGI:MGI:3613206 NCBI chr10:71,843,991...71,849,293
Ensembl chr10:71,843,991...71,849,293
JBrowse link
G Maged1 MAGE family member D1 ISO (MGI:MGI:3848096|PMID:19268530) RGD PMID:19268530 MGI:MGI:3848096 NCBI chr  X:63,803,194...63,809,715
Ensembl chr  X:63,803,189...63,809,861
JBrowse link
G Nog noggin IEA
ISO
ISS
GO_REF:0000107
(MGI:MGI:2446986|PMID:12141440), (MGI:MGI:3714585|PMID:17522159)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:12141440, PMID:17522159 GO_REF:0000024, GO_REF:0000107, MGI:MGI:2446986, MGI:MGI:3714585 NCBI chr10:76,811,759...76,813,386
Ensembl chr10:76,811,759...76,813,386
JBrowse link
G Pax2 paired box 2 ISS
ISO
GO_REF:0000024
(MGI:MGI:3704067|PMID:17314325), (MGI:MGI:3833510|PMID:17881463), (MGI:MGI:5009394|PMID:17538188)
UniProt
RGD
PMID:17314325, PMID:17538188, PMID:17881463 GO_REF:0000024, MGI:MGI:3704067, MGI:MGI:3833510, MGI:MGI:5009394 NCBI chr 1:264,493,579...264,585,073
Ensembl chr 1:264,504,591...264,583,329
JBrowse link
G Pax8 paired box 8 ISO
ISS
(MGI:MGI:3704067|PMID:17314325)
GO_REF:0000024
RGD
UniProt
PMID:17314325 GO_REF:0000024, MGI:MGI:3704067 NCBI chr 3:1,527,316...1,586,019
Ensembl chr 3:1,527,279...1,584,946
JBrowse link
G Sall1 spalt-like transcription factor 1 ISO MGI:MGI:3603818 (MGI:MGI:5563280|PMID:24550112) RGD PMID:24550112 MGI:MGI:5563280 NCBI chr19:23,387,737...23,405,025
Ensembl chr19:23,389,375...23,405,039
JBrowse link
G Six1 SIX homeobox 1 ISO MGI:MGI:88180 (MGI:MGI:4949995|PMID:21281623), (MGI:MGI:5009396|PMID:17300925) RGD PMID:17300925, PMID:21281623 MGI:MGI:4949995, MGI:MGI:5009396 NCBI chr 6:95,929,060...95,934,296
Ensembl chr 6:95,929,060...95,934,296
JBrowse link
G Six4 SIX homeobox 4 ISO (MGI:MGI:5009396|PMID:17300925) RGD PMID:17300925 MGI:MGI:5009396 NCBI chr 6:95,984,868...95,999,709
Ensembl chr 6:95,984,868...95,998,529
JBrowse link
G Smo smoothened, frizzled class receptor IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:3611729|PMID:16396903)
Ensembl
UniProt
RGD
PMID:16396903 GO_REF:0000024, GO_REF:0000107, MGI:MGI:3611729 NCBI chr 4:57,019,941...57,041,779
Ensembl chr 4:57,019,941...57,042,770
JBrowse link
G Sox8 SRY-box transcription factor 8 ISO
ISS
(MGI:MGI:4939090|PMID:21212101)
GO_REF:0000024
RGD
UniProt
PMID:21212101 GO_REF:0000024, MGI:MGI:4939090 NCBI chr10:14,932,348...14,937,336
Ensembl chr10:14,932,348...14,937,336
JBrowse link
G Sox9 SRY-box transcription factor 9 ISO
ISS
(MGI:MGI:4939090|PMID:21212101)
GO_REF:0000024
RGD
UniProt
PMID:21212101 GO_REF:0000024, MGI:MGI:4939090 NCBI chr10:101,288,528...101,294,030
Ensembl chr10:101,288,489...101,293,379
JBrowse link
G Tgfb1 transforming growth factor, beta 1 IMP PMID:17537984 UniProt PMID:17537984 RGD:1643596 NCBI chr 1:82,480,875...82,497,196
Ensembl chr 1:82,480,195...82,497,199
JBrowse link
G Vegfa vascular endothelial growth factor A ISO (MGI:MGI:3611700|PMID:16291795) RGD PMID:16291795 MGI:MGI:3611700 NCBI chr 9:17,340,341...17,355,681
Ensembl chr 9:17,340,341...17,355,681
JBrowse link
G Wnt2b Wnt family member 2B ISO (MGI:MGI:2150217|PMID:11507767) RGD PMID:11507767 MGI:MGI:2150217 NCBI chr 2:207,433,771...207,457,094
Ensembl chr 2:207,440,886...207,455,258
JBrowse link
primary lung bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hhex hematopoietically expressed homeobox ISO MGI:MGI:2177762 (MGI:MGI:3703395|PMID:16364283) RGD PMID:16364283 MGI:MGI:3703395 NCBI chr 1:256,101,994...256,107,581
Ensembl chr 1:256,101,903...256,107,649
JBrowse link
G Rdh10 retinol dehydrogenase 10 ISO (MGI:MGI:3709664|PMID:17473173) RGD PMID:17473173 MGI:MGI:3709664 NCBI chr 5:2,605,265...2,631,905
Ensembl chr 5:2,603,505...2,632,030
JBrowse link
regulation of blood vessel branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fkbpl FKBP prolyl isomerase like ISO MGI:MGI:4431442|MGI:MGI:5558157 (MGI:MGI:5699248|PMID:25767277) RGD PMID:25767277 MGI:MGI:5699248 NCBI chr20:4,411,890...4,413,360
Ensembl chr20:4,411,876...4,413,366
JBrowse link
regulation of branch elongation involved in ureteric bud branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnf1b HNF1 homeobox B ISO MGI:MGI:1857856 (MGI:MGI:4430439|PMID:20040500) RGD PMID:20040500 MGI:MGI:4430439 NCBI chr10:71,159,863...71,218,902
Ensembl chr10:71,159,869...71,218,902
JBrowse link
G Six1 SIX homeobox 1 ISO (MGI:MGI:5009396|PMID:17300925) RGD PMID:17300925 MGI:MGI:5009396 NCBI chr 6:95,929,060...95,934,296
Ensembl chr 6:95,929,060...95,934,296
JBrowse link
G Six4 SIX homeobox 4 ISO (MGI:MGI:5009396|PMID:17300925) RGD PMID:17300925 MGI:MGI:5009396 NCBI chr 6:95,984,868...95,999,709
Ensembl chr 6:95,984,868...95,998,529
JBrowse link
regulation of branching involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sox9 SRY-box transcription factor 9 ISO (MGI:MGI:5523731|PMID:24191021) RGD PMID:24191021 MGI:MGI:5523731 NCBI chr10:101,288,528...101,294,030
Ensembl chr10:101,288,489...101,293,379
JBrowse link
regulation of branching involved in mammary gland duct morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cav3 caveolin 3 ISO MGI:MGI:2180558 (MGI:MGI:3830397|PMID:19164602) RGD PMID:19164602 MGI:MGI:3830397 NCBI chr 4:144,382,945...144,398,919
Ensembl chr 4:144,382,945...144,398,917
JBrowse link
G Etv5 ETS variant transcription factor 5 ISO (MGI:MGI:2667785|PMID:12871699) RGD PMID:12871699 MGI:MGI:2667785 NCBI chr11:82,194,657...82,252,145
Ensembl chr11:82,194,657...82,252,139
JBrowse link
G Phb2 prohibitin 2 ISO MGI:MGI:3574361 (MGI:MGI:3695669|PMID:17065319) RGD PMID:17065319 MGI:MGI:3695669 NCBI chr 4:157,230,769...157,235,375
Ensembl chr 4:157,230,769...157,235,367
JBrowse link
G Tgfb1 transforming growth factor, beta 1 ISO MGI:MGI:98958 (MGI:MGI:3761053|PMID:17898001) RGD PMID:17898001 MGI:MGI:3761053 NCBI chr 1:82,480,875...82,497,196
Ensembl chr 1:82,480,195...82,497,199
JBrowse link
G Wnt5a Wnt family member 5A ISO
IEA
MGI:MGI:96079|MGI:MGI:98725 (MGI:MGI:3761053|PMID:17898001)
GO_REF:0000107
RGD
Ensembl
PMID:17898001 GO_REF:0000107, MGI:MGI:3761053 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
JBrowse link
regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Six2 SIX homeobox 2 ISO (MGI:MGI:3691408|PMID:17036046) RGD PMID:17036046 MGI:MGI:3691408 NCBI chr 6:8,952,572...8,955,893
Ensembl chr 6:8,952,572...8,956,276
JBrowse link
tertiary branching involved in mammary gland duct morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ar androgen receptor ISO
IEA
MGI:MGI:2687199 (MGI:MGI:2683859|PMID:14676301)
GO_REF:0000107
RGD
Ensembl
PMID:14676301 GO_REF:0000107, MGI:MGI:2683859 NCBI chr  X:67,656,253...67,828,998
Ensembl chr  X:67,656,253...67,829,026
JBrowse link
G Pgr progesterone receptor ISO
IEA
MGI:MGI:1857933 (MGI:MGI:1354852|PMID:10733525)
GO_REF:0000107
RGD
Ensembl
PMID:10733525 GO_REF:0000107, MGI:MGI:1354852 NCBI chr 8:7,128,656...7,187,796
Ensembl chr 8:7,128,656...7,187,796
JBrowse link
G Wnt4 Wnt family member 4 ISO
IEA
MGI:MGI:1857453 (MGI:MGI:1354852|PMID:10733525)
GO_REF:0000107
RGD
Ensembl
PMID:10733525 GO_REF:0000107, MGI:MGI:1354852 NCBI chr 5:155,649,238...155,668,065
Ensembl chr 5:155,649,217...155,672,579
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20014
    developmental process 6812
      anatomical structure morphogenesis 2872
        tube morphogenesis 932
          branching morphogenesis of an epithelial tube 192
            branching involved in blood vessel morphogenesis + 41
            branching involved in lymph vessel morphogenesis 1
            branching involved in mammary gland duct morphogenesis + 32
            branching involved in open tracheal system development + 0
            branching involved in ureteric bud morphogenesis + 67
            epithelial tube branching involved in lung morphogenesis + 39
            tube fusion + 0
Path 2
Term Annotations click to browse term
  biological_process 20014
    developmental process 6812
      anatomical structure development 6256
        tissue development 2094
          epithelium development 1257
            morphogenesis of an epithelium 582
              epithelial tube morphogenesis 397
                branching morphogenesis of an epithelial tube 192
                  branching involved in blood vessel morphogenesis + 41
                  branching involved in lymph vessel morphogenesis 1
                  branching involved in mammary gland duct morphogenesis + 32
                  branching involved in open tracheal system development + 0
                  branching involved in ureteric bud morphogenesis + 67
                  epithelial tube branching involved in lung morphogenesis + 39
                  tube fusion + 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.