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ONTOLOGY REPORT - ANNOTATIONS


Term:branching morphogenesis of an epithelial tube
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Accession:GO:0048754 term browser browse the term
Definition:The process in which the anatomical structures of branches in an epithelial tube are generated and organized. A tube is a long hollow cylinder.
Synonyms:related_synonym: tubulogenesis


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branching morphogenesis of an epithelial tube term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4galt1 beta-1,4-galactosyltransferase 1 ISO (MGI:MGI:2178150|PMID:11900463)
(MGI:MGI:3052392|PMID:15282149)
MGI PMID:11900463, PMID:15282149 MGI:MGI:2178150, MGI:MGI:3052392 NCBI chrNW_004936524:1,659,791...1,713,971 JBrowse link
G Bmp4 bone morphogenetic protein 4 ISO (PMID:10706139) UniProtKB PMID:10706139 NCBI chrNW_004936697:1,054,237...1,061,468 JBrowse link
G Bmp7 bone morphogenetic protein 7 ISO (MGI:MGI:3575981|PMID:15831470) MGI PMID:15831470 MGI:MGI:3575981 NCBI chrNW_004936530:71,965...143,940 JBrowse link
G Casr calcium sensing receptor ISO positive regulation RGD PMID:20117086 RGD:7206840 NCBI chrNW_004936536:8,574,064...8,599,446 JBrowse link
G Clic4 chloride intracellular channel 4 ISO (MGI:MGI:3837628|PMID:19197003) MGI PMID:19197003 MGI:MGI:3837628 NCBI chrNW_004936474:9,664,872...9,711,036 JBrowse link
G Dicer1 dicer 1, ribonuclease III ISO (MGI:MGI:3617296|PMID:16452165) MGI PMID:16452165 MGI:MGI:3617296 NCBI chrNW_004936846:528,768...584,599 JBrowse link
G Egf epidermal growth factor ISO (MGI:MGI:3575981|PMID:15831470) MGI PMID:15831470 MGI:MGI:3575981 NCBI chrNW_004936563:1,058,803...1,181,393 JBrowse link
G Fgf10 fibroblast growth factor 10 ISO (PMID:17959718) UniProtKB PMID:17959718 NCBI chrNW_004936480:18,114,231...18,195,884 JBrowse link
G Gdf7 growth differentiation factor 7 ISO (MGI:MGI:1934988|PMID:11356025) MGI PMID:11356025 MGI:MGI:1934988 NCBI chrNW_004936493:10,808,714...10,812,761 JBrowse link
G Gli2 GLI family zinc finger 2 ISO (MGI:MGI:1277743|PMID:9731531) MGI PMID:9731531 MGI:MGI:1277743 NCBI chrNW_004936469:49,616,552...49,788,760 JBrowse link
G Gli3 GLI family zinc finger 3 ISO (MGI:MGI:3608164|PMID:16247775) MGI PMID:16247775 MGI:MGI:3608164 NCBI chrNW_004936478:17,129,922...17,403,630 JBrowse link
G Hnf1b HNF1 homeobox B ISO (MGI:MGI:4430439|PMID:20040500) MGI PMID:20040500 MGI:MGI:4430439 NCBI chrNW_004936490:649,551...702,448 JBrowse link
G Igf1 insulin like growth factor 1 ISO (MGI:MGI:3616136|PMID:15059953) MGI PMID:15059953 MGI:MGI:3616136 NCBI chrNW_004936492:11,709,623...11,784,028 JBrowse link
G Kdr kinase insert domain receptor ISO (MGI:MGI:3613102|PMID:16375885) MGI PMID:16375885 MGI:MGI:3613102 NCBI chrNW_004936482:17,537,697...17,581,320 JBrowse link
G Lama5 laminin subunit alpha 5 ISO (MGI:MGI:2678847|PMID:14568553) MGI PMID:14568553 MGI:MGI:2678847 NCBI chrNW_004936514:9,928,234...9,973,425 JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase ISO (PMID:16153003) UniProtKB PMID:16153003 NCBI chrNW_004936589:2,280,803...2,390,179 JBrowse link
G Mgp matrix Gla protein ISO fetal lung RGD PMID:15136295 RGD:1582506 NCBI chrNW_004936587:2,601,419...2,605,848 JBrowse link
G Mks1 MKS transition zone complex subunit 1 ISO (MGI:MGI:4441259|PMID:17185389) UniProtKB PMID:17185389 MGI:MGI:4441259 NCBI chrNW_004936490:4,865,243...4,876,601 JBrowse link
G Mmp14 matrix metallopeptidase 14 ISO (MGI:MGI:3527919|PMID:15572153) MGI PMID:15572153 MGI:MGI:3527919 NCBI chrNW_004936722:1,447,189...1,457,632 JBrowse link
G Mycn MYCN proto-oncogene, bHLH transcription factor ISO (MGI:MGI:3574742|PMID:15716345) MGI PMID:15716345 MGI:MGI:3574742 NCBI chrNW_004936493:14,618,176...14,624,201 JBrowse link
G Nkx3-1 NK3 homeobox 1 ISO (MGI:MGI:1891543|PMID:11002344) MGI PMID:11002344 MGI:MGI:1891543 NCBI chrNW_004936555:7,087,677...7,091,334 JBrowse link
G Notch1 notch receptor 1 ISO (MGI:MGI:3529381|PMID:15064243) MGI PMID:15064243 MGI:MGI:3529381 NCBI chrNW_004936669:1,292,016...1,334,061 JBrowse link
G Pak1 p21 (RAC1) activated kinase 1 ISO (PMID:20457839) UniProtKB PMID:20457839 NCBI chrNW_004936498:6,001,126...6,135,663 JBrowse link
G Pkd1 polycystin 1, transient receptor potential channel interacting ISO (PMID:12482949)
(MGI:MGI:5603942|PMID:24939912)
UniProtKB PMID:12482949, PMID:24939912 MGI:MGI:5603942 NCBI chrNW_004936694:1,923,383...1,958,160 JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha ISO (MGI:MGI:3039057|PMID:15042703) MGI PMID:15042703 MGI:MGI:3039057 NCBI chrNW_004936599:2,345,982...2,348,494 JBrowse link
G Pxn paxillin ISO (MGI:MGI:2680875|PMID:14636584) MGI PMID:14636584 MGI:MGI:2680875 NCBI chrNW_004936668:660,415...709,282 JBrowse link
G Rasip1 Ras interacting protein 1 ISO (MGI:MGI:5052000|PMID:21396893) UniProtKB PMID:21396893 MGI:MGI:5052000 NCBI chrNW_004936664:2,743,568...2,754,618 JBrowse link
G Sema5a semaphorin 5A ISO (MGI:MGI:3575993|PMID:15743826) MGI PMID:15743826 MGI:MGI:3575993 NCBI chrNW_004936643:1,352,401...1,803,553 JBrowse link
G Shh sonic hedgehog signaling molecule ISO (MGI:MGI:3039063|PMID:15042696)
(MGI:MGI:3050270|PMID:15305287)
(MGI:MGI:1289788|PMID:9768363)
MGI PMID:9768363, PMID:15042696, PMID:15305287 MGI:MGI:1289788, MGI:MGI:3039063, MGI:MGI:3050270 NCBI chrNW_004936527:10,033,095...10,042,713 JBrowse link
G Slit2 slit guidance ligand 2 ISO (PMID:19005219)
(PMID:18345009)
UniProtKB PMID:18345009, PMID:19005219 NCBI chrNW_004936477:8,111,212...8,448,567 JBrowse link
G Spry2 sprouty RTK signaling antagonist 2 ISO (MGI:MGI:1331548|PMID:10074434) MGI PMID:10074434 MGI:MGI:1331548 NCBI chrNW_004936511:1,452,421...1,458,031 JBrowse link
G Timeless timeless circadian regulator ISO (MGI:MGI:2675515|PMID:12950082) MGI PMID:12950082 MGI:MGI:2675515 NCBI chrNW_004936646:780,021...792,856 JBrowse link
G Tmem67 transmembrane protein 67 ISO (MGI:MGI:4441259|PMID:17185389) UniProtKB PMID:17185389 MGI:MGI:4441259 NCBI chrNW_004936544:6,887,867...6,931,669 JBrowse link
G Vegfa vascular endothelial growth factor A ISO (MGI:MGI:3613102|PMID:16375885) MGI PMID:16375885 MGI:MGI:3613102 NCBI chrNW_004936476:16,245,134...16,261,180 JBrowse link
G Wnt4 Wnt family member 4 ISO (MGI:MGI:2178881|PMID:11948913) MGI PMID:11948913 MGI:MGI:2178881 NCBI chrNW_004936474:7,623,462...7,635,416 JBrowse link
G Wnt9b Wnt family member 9B ISO (MGI:MGI:3588895|PMID:16054034) MGI PMID:16054034 MGI:MGI:3588895 NCBI chrNW_004936541:1,899,039...1,939,561 JBrowse link
branch elongation involved in mammary gland duct branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tgfb1 transforming growth factor beta 1 ISO (MGI:MGI:3814777|PMID:18614704) MGI PMID:18614704 MGI:MGI:3814777 NCBI chrNW_004936661:3,742,080...3,758,266 JBrowse link
branch elongation involved in ureteric bud branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf1 fibroblast growth factor 1 ISO (PMID:11731227) UniProtKB PMID:11731227 NCBI chrNW_004936504:11,590,687...11,684,410 JBrowse link
branching involved in blood vessel morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor type 1 ISO (MGI:MGI:3703113|PMID:17078885) MGI PMID:17078885 MGI:MGI:3703113 NCBI chrNW_004936469:20,743,195...20,811,567 JBrowse link
G Ahr aryl hydrocarbon receptor ISO (MGI:MGI:1889403|PMID:10973493) DFLAT PMID:10973493 MGI:MGI:1889403 NCBI chrNW_004936546:3,737,908...3,783,492 JBrowse link
G Col4a1 collagen type IV alpha 1 chain ISO (PMID:20818663) BHF-UCL PMID:20818663 NCBI chrNW_004936472:2,416,043...2,543,561 JBrowse link
G Ctnnb1 catenin beta 1 ISO (MGI:MGI:3833040|PMID:19154719)
(MGI:MGI:2675534|PMID:12975353)
MGI PMID:12975353, PMID:19154719 MGI:MGI:2675534, MGI:MGI:3833040 NCBI chrNW_004936473:29,999,542...30,034,610 JBrowse link
G Cxcl12 C-X-C motif chemokine ligand 12 ISO (MGI:MGI:3578491|PMID:15626744) MGI PMID:15626744 MGI:MGI:3578491 NCBI chrNW_004936617:4,224,131...4,239,080 JBrowse link
G Cxcr4 C-X-C motif chemokine receptor 4 ISO (MGI:MGI:3578491|PMID:15626744) MGI PMID:15626744 MGI:MGI:3578491 NCBI chrNW_004936469:39,794,613...39,798,448 JBrowse link
G Dll4 delta like canonical Notch ligand 4 ISO (MGI:MGI:3056036|PMID:15466159) BHF-UCL PMID:15466159 MGI:MGI:3056036 NCBI chrNW_004936471:4,320,235...4,330,251 JBrowse link
G Edn1 endothelin 1 ISO (MGI:MGI:74210|PMID:7615798) MGI PMID:7615798 MGI:MGI:74210 NCBI chrNW_004936534:885,489...892,292 JBrowse link
G Ednra endothelin receptor type A ISO (MGI:MGI:3606840|PMID:15664398) MGI PMID:15664398 MGI:MGI:3606840 NCBI chrNW_004936535:1,950,117...2,005,786 JBrowse link
G Eng endoglin ISO (MGI:MGI:1337912|PMID:10348742) BHF-UCL PMID:10348742 MGI:MGI:1337912 NCBI chrNW_004936487:15,467,165...15,499,180 JBrowse link
G Fgf8 fibroblast growth factor 8 ISO (MGI:MGI:3588904|PMID:15996652) MGI PMID:15996652 MGI:MGI:3588904 NCBI chrNW_004936600:4,004,847...4,010,626 JBrowse link
G Flt1 fms related receptor tyrosine kinase 1 ISO (MGI:MGI:3045573|PMID:14982871) MGI PMID:14982871 MGI:MGI:3045573 NCBI chrNW_004936472:23,442,946...23,617,523 JBrowse link
G Foxc2 forkhead box C2 ISO (MGI:MGI:3606840|PMID:15664398) MGI PMID:15664398 MGI:MGI:3606840 NCBI chrNW_004936641:2,236,224...2,238,501 JBrowse link
G Gbx2 gastrulation brain homeobox 2 ISO (MGI:MGI:3588904|PMID:15996652) MGI PMID:15996652 MGI:MGI:3588904 NCBI chrNW_004936525:1,870,211...1,873,536 JBrowse link
G Gdf2 growth differentiation factor 2 ISO (PMID:20406889)
(MGI:MGI:4830635|PMID:20406889)
DFLAT PMID:20406889 MGI:MGI:4830635 NCBI chrNW_004936554:7,307,461...7,322,048 JBrowse link
G Gna13 G protein subunit alpha 13 ISO (MGI:MGI:3583513|PMID:15919816) MGI PMID:15919816 MGI:MGI:3583513 NCBI chrNW_004936541:7,583,911...7,623,485 JBrowse link
G Ihh Indian hedgehog signaling molecule ISO (MGI:MGI:3574706|PMID:15689378) MGI PMID:15689378 MGI:MGI:3574706 NCBI chrNW_004936569:1,474,693...1,480,562 JBrowse link
G Kdr kinase insert domain receptor ISO (PMID:23688497) BHF-UCL PMID:23688497 NCBI chrNW_004936482:17,537,697...17,581,320 JBrowse link
G Lef1 lymphoid enhancer binding factor 1 ISO (MGI:MGI:3833040|PMID:19154719) MGI PMID:19154719 MGI:MGI:3833040 NCBI chrNW_004936818:453,635...569,194 JBrowse link
G Nfatc3 nuclear factor of activated T cells 3 ISO (MGI:MGI:2136698|PMID:11439183) MGI PMID:11439183 MGI:MGI:2136698 NCBI chrNW_004936475:18,462,424...18,557,832 JBrowse link
G Nfatc4 nuclear factor of activated T cells 4 ISO (MGI:MGI:2136698|PMID:11439183) MGI PMID:11439183 MGI:MGI:2136698 NCBI chrNW_004936722:178,866...187,847 JBrowse link
G Notch4 notch receptor 4 ISO (MGI:MGI:1934537|PMID:11344305) UniProtKB PMID:11344305 MGI:MGI:1934537 NCBI chrNW_004936727:1,386,842...1,409,823 JBrowse link
G Nrarp NOTCH regulated ankyrin repeat protein ISO (MGI:MGI:3833040|PMID:19154719) MGI PMID:19154719 MGI:MGI:3833040 NCBI chrNW_004936669:702,825...705,009 JBrowse link
G Nrp1 neuropilin 1 ISO (MGI:MGI:5288256|PMID:21852397), (MGI:MGI:5484470|PMID:23315162), (MGI:MGI:5562961|PMID:24401374)
(MGI:MGI:3710026|PMID:17428830)
BHF-UCL
MGI
PMID:17428830, PMID:21852397, PMID:23315162, PMID:24401374 MGI:MGI:3710026, MGI:MGI:5288256, MGI:MGI:5484470, MGI:MGI:5562961 NCBI chrNW_004936574:1,694,433...1,834,720 JBrowse link
G Pitx2 paired like homeodomain 2 ISO (MGI:MGI:2389284|PMID:12397115) MGI PMID:12397115 MGI:MGI:2389284 NCBI chrNW_004936563:1,713,294...1,732,431 JBrowse link
G Plxnd1 plexin D1 ISO (MGI:MGI:5509072|PMID:23918385)
(MGI:MGI:3050159|PMID:15239958)
MGI PMID:15239958, PMID:23918385 MGI:MGI:3050159, MGI:MGI:5509072 NCBI chrNW_004936602:848,130...882,195 JBrowse link
G Ppp3r1 protein phosphatase 3 regulatory subunit B, alpha ISO (MGI:MGI:2136698|PMID:11439183) MGI PMID:11439183 MGI:MGI:2136698 NCBI chrNW_004936491:12,623,931...12,654,463 JBrowse link
G Rbm15 RNA binding motif protein 15 ISO (MGI:MGI:3833189|PMID:18981216) MGI PMID:18981216 MGI:MGI:3833189 NCBI chrNW_004936704:1,779,981...1,787,339 JBrowse link
G Sema3e semaphorin 3E ISO (MGI:MGI:3526793|PMID:15550623) UniProtKB PMID:15550623 MGI:MGI:3526793 NCBI chrNW_004936734:1,850,709...2,085,541 JBrowse link
G Sema5a semaphorin 5A ISO (MGI:MGI:3575993|PMID:15743826) MGI PMID:15743826 MGI:MGI:3575993 NCBI chrNW_004936643:1,352,401...1,803,553 JBrowse link
G Sfrp2 secreted frizzled related protein 2 ISO (MGI:MGI:4835126|PMID:19458075) BHF-UCL PMID:19458075 MGI:MGI:4835126 NCBI chrNW_004936576:604,174...612,440 JBrowse link
G Shh sonic hedgehog signaling molecule ISO (MGI:MGI:3583396|PMID:15936751) MGI PMID:15936751 MGI:MGI:3583396 NCBI chrNW_004936527:10,033,095...10,042,713 JBrowse link
G Srf serum response factor ISO (MGI:MGI:3811944|PMID:18804439) MGI PMID:18804439 MGI:MGI:3811944 NCBI chrNW_004936476:16,779,941...16,789,499 JBrowse link
G Stk4 serine/threonine kinase 4 ISO (MGI:MGI:4412133|PMID:19786569) MGI PMID:19786569 MGI:MGI:4412133 NCBI chrNW_004936514:7,686,760...7,784,948 JBrowse link
G Tbx20 T-box transcription factor 20 ISO (MGI:MGI:3578574|PMID:15843414) MGI PMID:15843414 MGI:MGI:3578574 NCBI chrNW_004936478:10,887,900...10,939,510 JBrowse link
G Tgfbr2 transforming growth factor beta receptor 2 ISO (MGI:MGI:3703113|PMID:17078885) MGI PMID:17078885 MGI:MGI:3703113 NCBI chrNW_004936473:21,324,669...21,409,430 JBrowse link
G Vegfa vascular endothelial growth factor A ISO (PMID:23083510), (PMID:23688497)
(MGI:MGI:3710026|PMID:17428830)
BHF-UCL
MGI
PMID:17428830, PMID:23083510, PMID:23688497 MGI:MGI:3710026 NCBI chrNW_004936476:16,245,134...16,261,180 JBrowse link
branching involved in lymph vessel morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nfatc1 nuclear factor of activated T cells 1 ISO (MGI:MGI:3848105|PMID:19233265) MGI PMID:19233265 MGI:MGI:3848105 NCBI chrNW_004936616:484,062...584,950 JBrowse link
branching involved in mammary gland duct morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Btrc beta-transducin repeat containing E3 ubiquitin protein ligase ISO (MGI:MGI:3054694|PMID:15340078) MGI PMID:15340078 MGI:MGI:3054694 NCBI chrNW_004936600:4,215,219...4,424,498 JBrowse link
G Ccl11 C-C motif chemokine ligand 11 ISO (MGI:MGI:3640884|PMID:10804170) MGI PMID:10804170 MGI:MGI:3640884 NCBI chrNW_004936538:835,436...848,907 JBrowse link
G Csf1 colony stimulating factor 1 ISO (MGI:MGI:3640884|PMID:10804170) MGI PMID:10804170 MGI:MGI:3640884 NCBI chrNW_004936704:1,372,137...1,393,355 JBrowse link
G Ddr1 discoidin domain receptor tyrosine kinase 1 ISO (MGI:MGI:1932625|PMID:11283268) MGI PMID:11283268 MGI:MGI:1932625 NCBI chrNW_004936837:523,227...538,799 JBrowse link
G Epha2 EPH receptor A2 ISO (MGI:MGI:5284750|PMID:19321667) UniProtKB PMID:19321667 MGI:MGI:5284750 NCBI chrNW_004936474:3,648,395...3,673,856 JBrowse link
G Etv4 ETS variant transcription factor 4 ISO (MGI:MGI:2667785|PMID:12871699)
(MGI:MGI:3828920|PMID:18977342)
MGI PMID:12871699, PMID:18977342 MGI:MGI:2667785, MGI:MGI:3828920 NCBI chrNW_004936541:120,533...138,463 JBrowse link
G Kdm5b lysine demethylase 5B ISO (MGI:MGI:5619178|PMID:24802759) MGI PMID:24802759 MGI:MGI:5619178 NCBI chrNW_004936567:1,782,056...1,860,861 JBrowse link
G Lrp5 LDL receptor related protein 5 ISO (MGI:MGI:3692480|PMID:16973609) MGI PMID:16973609 MGI:MGI:3692480 NCBI chrNW_004936599:1,746,309...1,814,471 JBrowse link
G Lrp6 LDL receptor related protein 6 ISO (MGI:MGI:3849913|PMID:19503830) MGI PMID:19503830 MGI:MGI:3849913 NCBI chrNW_004936587:5,065,200...5,143,029 JBrowse link
G Msx2 msh homeobox 2 ISO (MGI:MGI:1355063|PMID:10742104) MGI PMID:10742104 MGI:MGI:1355063 NCBI chrNW_004936609:1,216,436...1,221,528 JBrowse link
G Pml PML nuclear body scaffold ISO (MGI:MGI:3839212|PMID:19261859) MGI PMID:19261859 MGI:MGI:3839212 NCBI chrNW_004936471:33,135,186...33,173,218 JBrowse link
G Slc12a2 solute carrier family 12 member 2 ISO (MGI:MGI:2180693|PMID:8864124) MGI PMID:8864124 MGI:MGI:2180693 NCBI chrNW_004936504:1,378,812...1,465,463 JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase ISO (MGI:MGI:3589531|PMID:16007215) MGI PMID:16007215 MGI:MGI:3589531 NCBI chrNW_004936561:3,826,802...3,844,406 JBrowse link
G Tbx3 T-box transcription factor 3 ISO (MGI:MGI:3608166|PMID:16222716) MGI PMID:16222716 MGI:MGI:3608166 NCBI chrNW_004936558:7,230,361...7,243,651 JBrowse link
branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts16 ADAM metallopeptidase with thrombospondin type 1 motif 16 ISO (MGI:MGI:5504318|PMID:23661704) MGI PMID:23661704 MGI:MGI:5504318 NCBI chrNW_004936634:1,830,252...1,925,622 JBrowse link
G Agt angiotensinogen NOT ISO (MGI:MGI:2655949|PMID:12657564)
(MGI:MGI:77583|PMID:8675666)
MGI PMID:8675666, PMID:12657564 MGI:MGI:2655949, MGI:MGI:77583 NCBI chrNW_004936484:19,713,299...19,721,144 JBrowse link
G Bcl2 BCL2 apoptosis regulator ISO (MGI:MGI:3036971|PMID:14699151)
(MGI:MGI:3768986|PMID:16672320)
MGI PMID:14699151, PMID:16672320 MGI:MGI:3036971, MGI:MGI:3768986 NCBI chrNW_004936497:2,209,136...2,373,580 JBrowse link
G Bmp2 bone morphogenetic protein 2 ISO (MGI:MGI:3583399|PMID:15925496) MGI PMID:15925496 MGI:MGI:3583399 NCBI chrNW_004936485:12,428,765...12,439,570 JBrowse link
G Bmp4 bone morphogenetic protein 4 ISO (PMID:12631064)
(MGI:MGI:3714585|PMID:17522159)
UniProtKB
MGI
PMID:12631064, PMID:17522159 MGI:MGI:3714585 NCBI chrNW_004936697:1,054,237...1,061,468 JBrowse link
G Cd44 CD44 molecule (Indian blood group) ISO (MGI:MGI:2449954|PMID:10926769) MGI PMID:10926769 MGI:MGI:2449954 NCBI chrNW_004936533:2,949,026...3,033,166 JBrowse link
G Cited1 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1 NOT ISO PMID:15843474
(MGI:MGI:3717986|PMID:17615577)
UniProt
UniProtKB
PMID:15843474, PMID:17615577 MGI:MGI:3717986, RGD:8554075 NCBI chrNW_004936762:1,387,354...1,392,955 JBrowse link
G Cited2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 NOT ISO (MGI:MGI:3717986|PMID:17615577) UniProtKB PMID:17615577 MGI:MGI:3717986 NCBI chrNW_004936560:6,353,901...6,356,749 JBrowse link
G Ctnnb1 catenin beta 1 ISO (MGI:MGI:3714576|PMID:17537789) MGI PMID:17537789 MGI:MGI:3714576 NCBI chrNW_004936473:29,999,542...30,034,610 JBrowse link
G Ctnnbip1 catenin beta interacting protein 1 ISO (MGI:MGI:3757813|PMID:17803964) MGI PMID:17803964 MGI:MGI:3757813 NCBI chrNW_004936623:3,782,005...3,806,616 JBrowse link
G Dchs1 dachsous cadherin-related 1 ISO (MGI:MGI:4939936|PMID:21303848) MGI PMID:21303848 MGI:MGI:4939936 NCBI chrNW_004936842:677,416...697,013 JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 ISO (MGI:MGI:3709697|PMID:17435047)
(MGI:MGI:3688770|PMID:16105026)
(MGI:MGI:3699022|PMID:17172448)
MGI PMID:16105026, PMID:17172448, PMID:17435047 MGI:MGI:3688770, MGI:MGI:3699022, MGI:MGI:3709697 NCBI chrNW_004936833:551,989...843,064 JBrowse link
G Dspp dentin sialophosphoprotein ISO (MGI:MGI:3686561|PMID:16937369) MGI PMID:16937369 MGI:MGI:3686561 NCBI chrNW_004936905:458,062...463,359 JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 ISO (MGI:MGI:2662002|PMID:12783782) MGI PMID:12783782 MGI:MGI:2662002 NCBI chrNW_004936648:395,526...546,705 JBrowse link
G Fat4 FAT atypical cadherin 4 ISO (MGI:MGI:4939936|PMID:21303848) MGI PMID:21303848 MGI:MGI:4939936 NCBI chrNW_004936662:3,537,917...3,704,012 JBrowse link
G Fgf2 fibroblast growth factor 2 ISO (PMID:12631064) UniProtKB PMID:12631064 NCBI chrNW_004936662:1,886,176...1,928,998 JBrowse link
G Fgf8 fibroblast growth factor 8 ISO (MGI:MGI:3603080|PMID:16049111) MGI PMID:16049111 MGI:MGI:3603080 NCBI chrNW_004936600:4,004,847...4,010,626 JBrowse link
G Gdnf glial cell derived neurotrophic factor ISO (MGI:MGI:81287|PMID:8657307)
(MGI:MGI:2675756|PMID:13678594), (MGI:MGI:4949995|PMID:21281623)
UniProtKB
MGI
PMID:8657307, PMID:13678594, PMID:21281623 MGI:MGI:2675756, MGI:MGI:4949995, MGI:MGI:81287 NCBI chrNW_004936518:4,291,391...4,310,752 JBrowse link
G Gli3 GLI family zinc finger 3 ISO (MGI:MGI:3611729|PMID:16396903) MGI PMID:16396903 MGI:MGI:3611729 NCBI chrNW_004936478:17,129,922...17,403,630 JBrowse link
G Gpc3 glypican 3 ISO (MGI:MGI:3583399|PMID:15925496) MGI PMID:15925496 MGI:MGI:3583399 NCBI chrNW_004936691:1,060,013...1,459,736 JBrowse link
G Greb1l GREB1 like retinoic acid receptor coactivator ISO (MGI:MGI:6094060|PMID:29100091) MGI PMID:29100091 MGI:MGI:6094060 NCBI chrNW_004936550:1,110,679...1,240,463 JBrowse link
G Gzf1 GDNF inducible zinc finger protein 1 ISO (MGI:MGI:2683817|PMID:14522971) MGI PMID:14522971 MGI:MGI:2683817 NCBI chrNW_004936620:2,208,185...2,223,651 JBrowse link
G Hoxa11 homeobox A11 ISO (MGI:MGI:2135652|PMID:11493536) MGI PMID:11493536 MGI:MGI:2135652 NCBI chrNW_004936478:3,809,288...3,813,014 JBrowse link
G Ilk integrin linked kinase ISO (MGI:MGI:3575981|PMID:15831470) MGI PMID:15831470 MGI:MGI:3575981 NCBI chrNW_004936842:661,961...667,993 JBrowse link
G Lama5 laminin subunit alpha 5 ISO (MGI:MGI:2678847|PMID:14568553) MGI PMID:14568553 MGI:MGI:2678847 NCBI chrNW_004936514:9,928,234...9,973,425 JBrowse link
G Lhx1 LIM homeobox 1 ISO (PMID:7909549) UniProtKB PMID:7909549 NCBI chrNW_004936490:1,324,378...1,332,177 JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor ISO (MGI:MGI:3830398|PMID:19161241) UniProtKB PMID:19161241 MGI:MGI:3830398 NCBI chrNW_004936470:20,480,844...20,485,955 JBrowse link
G Npnt nephronectin ISO (MGI:MGI:3714574|PMID:17537792) MGI PMID:17537792 MGI:MGI:3714574 NCBI chrNW_004936814:1,096,604...1,165,755 JBrowse link
G Pax2 paired box 2 ISO (PMID:1337742)
(MGI:MGI:3768986|PMID:16672320)
UniProtKB
MGI
PMID:1337742, PMID:16672320 MGI:MGI:3768986 NCBI chrNW_004936600:4,850,594...4,939,010 JBrowse link
G Pax8 paired box 8 ISO (PMID:1337742) UniProtKB PMID:1337742 NCBI chrNW_004936783:1,523,658...1,553,464 JBrowse link
G Pbx1 PBX homeobox 1 ISO (MGI:MGI:2451200|PMID:12591246) MGI PMID:12591246 MGI:MGI:2451200 NCBI chrNW_004936481:20,200,236...20,440,623 JBrowse link
G Pgf placental growth factor ISO (MGI:MGI:2675756|PMID:13678594) MGI PMID:13678594 MGI:MGI:2675756 NCBI chrNW_004936488:4,098,187...4,111,108 JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel ISO (PMID:11891195) UniProtKB PMID:11891195 NCBI chrNW_004936905:76,781...128,995 JBrowse link
G Pspn persephin ISO (MGI:MGI:1196665|PMID:9491986) MGI PMID:9491986 MGI:MGI:1196665 NCBI chrNW_004936588:3,734,821...3,735,766 JBrowse link
G Ptch1 patched 1 ISO (MGI:MGI:4367286|PMID:19809516) MGI PMID:19809516 MGI:MGI:4367286 NCBI chrNW_004936626:4,241,993...4,301,919 JBrowse link
G Sall1 spalt like transcription factor 1 ISO (MGI:MGI:2447943|PMID:12482961) UniProtKB PMID:12482961 MGI:MGI:2447943 NCBI chrNW_004936475:4,106,663...4,121,356 JBrowse link
G Shh sonic hedgehog signaling molecule ISO (MGI:MGI:3611729|PMID:16396903) MGI PMID:16396903 MGI:MGI:3611729 NCBI chrNW_004936527:10,033,095...10,042,713 JBrowse link
G Six1 SIX homeobox 1 ISO (MGI:MGI:2662002|PMID:12783782) MGI PMID:12783782 MGI:MGI:2662002 NCBI chrNW_004936495:4,839,496...4,842,906 JBrowse link
G Smad4 SMAD family member 4 ISO (MGI:MGI:3583399|PMID:15925496) MGI PMID:15925496 MGI:MGI:3583399 NCBI chrNW_004936497:12,242,869...12,278,012 JBrowse link
G Sox9 SRY-box transcription factor 9 ISO (PMID:8787755) UniProtKB PMID:8787755 NCBI chrNW_004936655:1,849,044...1,852,648 JBrowse link
G Tcf21 transcription factor 21 ISO (MGI:MGI:1202620|PMID:9507058)
(MGI:MGI:1347485|PMID:10572052)
MGI PMID:9507058, PMID:10572052 MGI:MGI:1202620, MGI:MGI:1347485 NCBI chrNW_004936560:1,733,903...1,736,895 JBrowse link
G Timeless timeless circadian regulator ISO RGD PMID:10963667 RGD:2308864 NCBI chrNW_004936646:780,021...792,856 JBrowse link
G Wnt1 Wnt family member 1 ISO (MGI:MGI:3588895|PMID:16054034) MGI PMID:16054034 MGI:MGI:3588895 NCBI chrNW_004936512:6,781,001...6,785,358 JBrowse link
G Wnt4 Wnt family member 4 ISO (MGI:MGI:3588895|PMID:16054034) MGI PMID:16054034 MGI:MGI:3588895 NCBI chrNW_004936474:7,623,462...7,635,416 JBrowse link
G Wnt6 Wnt family member 6 ISO (MGI:MGI:2178881|PMID:11948913) MGI PMID:11948913 MGI:MGI:2178881 NCBI chrNW_004936569:1,290,061...1,302,672 JBrowse link
G Wnt9b Wnt family member 9B ISO (MGI:MGI:3588895|PMID:16054034) MGI PMID:16054034 MGI:MGI:3588895 NCBI chrNW_004936541:1,899,039...1,939,561 JBrowse link
G Wt1 WT1 transcription factor ISO (MGI:MGI:1333093|PMID:10101119)
(PMID:10101119)
UniProtKB PMID:10101119 MGI:MGI:1333093 NCBI chrNW_004936533:5,411,949...5,459,693 JBrowse link
bud dilation involved in lung branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 ISO (PMID:8674409) MGI PMID:8674409 NCBI chrNW_004936697:1,054,237...1,061,468 JBrowse link
bud elongation involved in lung branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 ISO (MGI:MGI:3788965|PMID:18367557) MGI PMID:18367557 MGI:MGI:3788965 NCBI chrNW_004936697:1,054,237...1,061,468 JBrowse link
G Fgf10 fibroblast growth factor 10 ISO (MGI:MGI:5052190|PMID:21764747) MGI PMID:21764747 MGI:MGI:5052190 NCBI chrNW_004936480:18,114,231...18,195,884 JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 ISO (MGI:MGI:3688953|PMID:16989802) MGI PMID:16989802 MGI:MGI:3688953 NCBI chrNW_004936486:10,506,680...10,606,272 JBrowse link
G Rdh10 retinol dehydrogenase 10 ISO (MGI:MGI:3709664|PMID:17473173) MGI PMID:17473173 MGI:MGI:3709664 NCBI chrNW_004936648:2,060,131...2,088,021 JBrowse link
G Spry1 sprouty RTK signaling antagonist 1 ISO (MGI:MGI:5052190|PMID:21764747) MGI PMID:21764747 MGI:MGI:5052190 NCBI chrNW_004936662:2,241,928...2,245,616 JBrowse link
G Spry2 sprouty RTK signaling antagonist 2 ISO (MGI:MGI:5052190|PMID:21764747) MGI PMID:21764747 MGI:MGI:5052190 NCBI chrNW_004936511:1,452,421...1,458,031 JBrowse link
G Yap1 Yes1 associated transcriptional regulator ISO (MGI:MGI:5586932|PMID:25043473) MGI PMID:25043473 MGI:MGI:5586932 NCBI chrNW_004936551:5,638,383...5,740,523 JBrowse link
bud outgrowth involved in lung branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 ISO (PMID:9740653) MGI PMID:9740653 NCBI chrNW_004936480:18,114,231...18,195,884 JBrowse link
G Shh sonic hedgehog signaling molecule ISO (MGI:MGI:1277744|PMID:9731532) MGI PMID:9731532 MGI:MGI:1277744 NCBI chrNW_004936527:10,033,095...10,042,713 JBrowse link
G Tmtc3 transmembrane O-mannosyltransferase targeting cadherins 3 ISO (MGI:MGI:5300435|PMID:21956870) MGI PMID:21956870 MGI:MGI:5300435 NCBI chrNW_004936507:5,305,489...5,349,828 JBrowse link
G Tnc tenascin C ISO RGD PMID:16928692 RGD:4889612 NCBI chrNW_004936487:4,172,263...4,256,780 JBrowse link
dichotomous subdivision of terminal units involved in lung branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctsh cathepsin H ISO (MGI:MGI:3722010|PMID:17500053) UniProtKB PMID:17500053 MGI:MGI:3722010 NCBI chrNW_004936471:37,135,200...37,156,081 JBrowse link
dichotomous subdivision of terminal units involved in mammary gland duct morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Areg amphiregulin ISO (MGI:MGI:3703920|PMID:17369357) MGI PMID:17369357 MGI:MGI:3703920 NCBI chrNW_004936598:1,276,599...1,283,612 JBrowse link
G Tfap2c transcription factor AP-2 gamma ISO (MGI:MGI:4422106|PMID:20131354) MGI PMID:20131354 MGI:MGI:4422106 NCBI chrNW_004936875:491,032...498,732 JBrowse link
epithelial cell proliferation involved in mammary gland duct elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Areg amphiregulin ISO (MGI:MGI:3703920|PMID:17369357) MGI PMID:17369357 MGI:MGI:3703920 NCBI chrNW_004936598:1,276,599...1,283,612 JBrowse link
G Esr1 estrogen receptor 1 ISO (MGI:MGI:3629536|PMID:12021201) MGI PMID:12021201 MGI:MGI:3629536 NCBI chrNW_004936489:4,616,839...4,887,179 JBrowse link
G Med1 mediator complex subunit 1 ISO (MGI:MGI:3576991|PMID:15647257) MGI PMID:15647257 MGI:MGI:3576991 NCBI chrNW_004936490:14,625,201...14,663,184 JBrowse link
G Tfap2c transcription factor AP-2 gamma ISO (MGI:MGI:4422106|PMID:20131354) MGI PMID:20131354 MGI:MGI:4422106 NCBI chrNW_004936875:491,032...498,732 JBrowse link
G Wnt5a Wnt family member 5A ISO (MGI:MGI:3761053|PMID:17898001) MGI PMID:17898001 MGI:MGI:3761053 NCBI chrNW_004936473:6,031,627...6,052,211 JBrowse link
epithelial tube branching involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 ISO (PMID:8674409) MGI
RGD
PMID:8674409, PMID:8769111 RGD:2306315 NCBI chrNW_004936697:1,054,237...1,061,468 JBrowse link
G Ctnnb1 catenin beta 1 ISO (MGI:MGI:3773938|PMID:18231602) MGI PMID:18231602 MGI:MGI:3773938 NCBI chrNW_004936473:29,999,542...30,034,610 JBrowse link
G Ctsd cathepsin D NOT ISO (MGI:MGI:3722010|PMID:17500053) UniProtKB PMID:17500053 MGI:MGI:3722010 NCBI chrNW_004936816:680,798...690,959 JBrowse link
G Ctsl cathepsin L NOT ISO (MGI:MGI:3722010|PMID:17500053) UniProtKB PMID:17500053 MGI:MGI:3722010 NCBI chrNW_004936680:3,047,355...3,050,640 JBrowse link
G Ctsz cathepsin Z ISO (PMID:17500053) UniProtKB PMID:17500053 NCBI chrNW_004936530:1,482,007...1,490,685 JBrowse link
G Dag1 dystroglycan 1 ISO (MGI:MGI:2156962|PMID:11798066) MGI PMID:11798066 MGI:MGI:2156962 NCBI chrNW_004936529:1,099,510...1,171,587 JBrowse link
G Dlg5 discs large MAGUK scaffold protein 5 ISO (MGI:MGI:5487693|PMID:23466739) MGI PMID:23466739 MGI:MGI:5487693 NCBI chrNW_004936521:1,649,557...1,753,149 JBrowse link
G Esrp1 epithelial splicing regulatory protein 1 ISO (MGI:MGI:5699497|PMID:26371508) MGI PMID:26371508 MGI:MGI:5699497 NCBI chrNW_004936544:7,633,266...7,690,624 JBrowse link
G Esrp2 epithelial splicing regulatory protein 2 ISO (MGI:MGI:5699497|PMID:26371508) MGI PMID:26371508 MGI:MGI:5699497 NCBI chrNW_004936475:18,557,840...18,564,461 JBrowse link
G Ext1 exostosin glycosyltransferase 1 ISO (MGI:MGI:5912649|PMID:28859094) MGI PMID:28859094 MGI:MGI:5912649 NCBI chrNW_004936470:28,303,213...28,566,470 JBrowse link
G Fgf10 fibroblast growth factor 10 ISO (MGI:MGI:1101385|PMID:9428423), (MGI:MGI:3609523|PMID:16169547), (MGI:MGI:3613102|PMID:16375885)
(MGI:MGI:3716020|PMID:17560563)
(MGI:MGI:1327513|PMID:9916808)
(MGI:MGI:3578606|PMID:15800000)
(MGI:MGI:1309706|PMID:9784490)
MGI PMID:9428423, PMID:9784490, PMID:9916808, PMID:15800000, PMID:16169547, PMID:16375885, PMID:17560563 MGI:MGI:1101385, MGI:MGI:1309706, MGI:MGI:1327513, MGI:MGI:3578606, MGI:MGI:3609523, MGI:MGI:3613102, MGI:MGI:3716020 NCBI chrNW_004936480:18,114,231...18,195,884 JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 ISO (MGI:MGI:5523405|PMID:24058167) MGI PMID:24058167 MGI:MGI:5523405 NCBI chrNW_004936486:10,506,680...10,606,272 JBrowse link
G Foxa1 forkhead box A1 ISO (MGI:MGI:3579763|PMID:15668254) MGI PMID:15668254 MGI:MGI:3579763 NCBI chrNW_004936494:11,529,546...11,535,224 JBrowse link
G Foxa2 forkhead box A2 ISO (MGI:MGI:3579763|PMID:15668254) MGI PMID:15668254 MGI:MGI:3579763 NCBI chrNW_004936620:2,966,341...2,969,349 JBrowse link
G Foxf1 forkhead box F1 ISO (MGI:MGI:2135612|PMID:11493558) MGI PMID:11493558 MGI:MGI:2135612 NCBI chrNW_004943883:4...1,756 JBrowse link
G Hhip hedgehog interacting protein ISO (MGI:MGI:2450020|PMID:12569124) MGI PMID:12569124 MGI:MGI:2450020 NCBI chrNW_004936535:4,210,305...4,305,930 JBrowse link
G Hmga2 high mobility group AT-hook 2 ISO (MGI:MGI:5638831|PMID:24661562) MGI PMID:24661562 MGI:MGI:5638831 NCBI chrNW_004936545:3,944,419...3,958,289 JBrowse link
G Hoxa5 homeobox A5 ISO (MGI:MGI:1195049|PMID:9441679) MGI PMID:9441679 MGI:MGI:1195049 NCBI chrNW_004936478:3,768,757...3,771,850 JBrowse link
G Kras KRAS proto-oncogene, GTPase ISO (MGI:MGI:5523405|PMID:24058167) MGI PMID:24058167 MGI:MGI:5523405 NCBI chrNW_004936548:2,078,568...2,113,877 JBrowse link
G Lama1 laminin subunit alpha 1 ISO (MGI:MGI:2156962|PMID:11798066), (MGI:MGI:80991|PMID:1907584) MGI PMID:1907584, PMID:11798066 MGI:MGI:2156962, MGI:MGI:80991 NCBI chrNW_004936670:359,343...511,126 JBrowse link
G Nkx2-1 NK2 homeobox 1 ISO (PMID:8675988) UniProtKB PMID:8675988 NCBI chrNW_004936494:10,517,488...10,520,567 JBrowse link
G Rspo2 R-spondin 2 ISO (MGI:MGI:3774879|PMID:18256198) MGI PMID:18256198 MGI:MGI:3774879 NCBI chrNW_004936470:36,680,716...36,815,347 JBrowse link
G Shh sonic hedgehog signaling molecule ISO (MGI:MGI:1277744|PMID:9731532), (MGI:MGI:1346236|PMID:10500184) RGD
MGI
PMID:8769111, PMID:9731532, PMID:10500184 MGI:MGI:1277744, MGI:MGI:1346236, RGD:2306315 NCBI chrNW_004936527:10,033,095...10,042,713 JBrowse link
G Sox2 SRY-box transcription factor 2 ISO (MGI:MGI:3795352|PMID:18374910) MGI PMID:18374910 MGI:MGI:3795352 NCBI chrNW_004936566:1,630,698...1,632,607 JBrowse link
G Sox9 SRY-box transcription factor 9 ISO (MGI:MGI:5523405|PMID:24058167) MGI PMID:24058167 MGI:MGI:5523405 NCBI chrNW_004936655:1,849,044...1,852,648 JBrowse link
lateral sprouting involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Celsr1 cadherin EGF LAG seven-pass G-type receptor 1 ISO (MGI:MGI:4452277|PMID:20223754) MGI PMID:20223754 MGI:MGI:4452277 NCBI chrNW_004936629:3,453,384...3,570,250 JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 ISO (MGI:MGI:4452277|PMID:20223754) MGI PMID:20223754 MGI:MGI:4452277 NCBI chrNW_004936740:228,377...242,318 JBrowse link
lateral sprouting involved in mammary gland duct morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ar androgen receptor ISO (MGI:MGI:2683859|PMID:14676301) MGI PMID:14676301 MGI:MGI:2683859 NCBI chrNW_004936635:485,903...647,820 JBrowse link
G Wnt5a Wnt family member 5A ISO (MGI:MGI:3761053|PMID:17898001) MGI PMID:17898001 MGI:MGI:3761053 NCBI chrNW_004936473:6,031,627...6,052,211 JBrowse link
lung induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 ISO (MGI:MGI:4360856|PMID:19686689)
(MGI:MGI:4361775|PMID:19805295)
MGI PMID:19686689, PMID:19805295 MGI:MGI:4360856, MGI:MGI:4361775 NCBI chrNW_004936473:29,999,542...30,034,610 JBrowse link
G Wnt2 Wnt family member 2 ISO (MGI:MGI:4360856|PMID:19686689) MGI PMID:19686689 MGI:MGI:4360856 NCBI chrNW_004936589:1,825,209...1,866,898 JBrowse link
G Wnt2b Wnt family member 2B ISO (MGI:MGI:4360856|PMID:19686689) MGI PMID:19686689 MGI:MGI:4360856 NCBI chrNW_004936690:1,077,538...1,094,005 JBrowse link
mammary gland branching involved in pregnancy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Csmd1 CUB and Sushi multiple domains 1 ISO (MGI:MGI:6369467|PMID:31604923) MGI PMID:31604923 MGI:MGI:6369467 NCBI chrNW_004936615:1,677,845...2,063,781 JBrowse link
G Esr1 estrogen receptor 1 ISO (MGI:MGI:1926565|PMID:10919287) MGI PMID:10919287 MGI:MGI:1926565 NCBI chrNW_004936489:4,616,839...4,887,179 JBrowse link
G Med1 mediator complex subunit 1 ISO (MGI:MGI:3576991|PMID:15647257) MGI PMID:15647257 MGI:MGI:3576991 NCBI chrNW_004936490:14,625,201...14,663,184 JBrowse link
G Vdr vitamin D receptor ISO (MGI:MGI:3051725|PMID:15178742) MGI PMID:15178742 MGI:MGI:3051725 NCBI chrNW_004936512:5,741,836...5,800,999 JBrowse link
mammary gland branching involved in thelarche term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Areg amphiregulin ISO (MGI:MGI:1336843|PMID:10331984), (MGI:MGI:3703920|PMID:17369357) MGI PMID:10331984, PMID:17369357 MGI:MGI:1336843, MGI:MGI:3703920 NCBI chrNW_004936598:1,276,599...1,283,612 JBrowse link
G Med1 mediator complex subunit 1 ISO (MGI:MGI:3576991|PMID:15647257) MGI PMID:15647257 MGI:MGI:3576991 NCBI chrNW_004936490:14,625,201...14,663,184 JBrowse link
G Ncoa3 nuclear receptor coactivator 3 ISO (MGI:MGI:1859522|PMID:11015591) MGI PMID:11015591 MGI:MGI:1859522 NCBI chrNW_004936514:5,900,135...5,967,862 JBrowse link
G Phb2 prohibitin 2 ISO (MGI:MGI:3695669|PMID:17065319) MGI PMID:17065319 MGI:MGI:3695669 NCBI chrNW_004936709:854,493...859,182 JBrowse link
G Tgfb1 transforming growth factor beta 1 ISO (MGI:MGI:3814777|PMID:18614704) MGI PMID:18614704 MGI:MGI:3814777 NCBI chrNW_004936661:3,742,080...3,758,266 JBrowse link
G Wnt5a Wnt family member 5A ISO (MGI:MGI:3761053|PMID:17898001) MGI PMID:17898001 MGI:MGI:3761053 NCBI chrNW_004936473:6,031,627...6,052,211 JBrowse link
negative regulation of branch elongation involved in ureteric bud branching by BMP signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 ISO (PMID:10706139), (PMID:17118062) UniProtKB PMID:10706139, PMID:17118062 NCBI chrNW_004936697:1,054,237...1,061,468 JBrowse link
negative regulation of branching involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tnf tumor necrosis factor ISO (PMID:17350185) UniProtKB PMID:17350185 NCBI chrNW_004936727:1,936,066...1,937,766 JBrowse link
negative regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 ISO (MGI:MGI:3525902|PMID:15634693)
(MGI:MGI:4949995|PMID:21281623)
(PMID:12141440), (PMID:17118062)
UniProtKB
MGI
PMID:12141440, PMID:15634693, PMID:17118062, PMID:21281623 MGI:MGI:3525902, MGI:MGI:4949995 NCBI chrNW_004936697:1,054,237...1,061,468 JBrowse link
G Tacstd2 tumor associated calcium signal transducer 2 ISO (MGI:MGI:5315060|PMID:22194864) UniProtKB PMID:22194864 MGI:MGI:5315060 NCBI chrNW_004936522:3,206,826...3,208,675 JBrowse link
orthogonal dichotomous subdivision of terminal units involved in lung branching morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Celsr1 cadherin EGF LAG seven-pass G-type receptor 1 ISO (MGI:MGI:4452277|PMID:20223754) MGI PMID:20223754 MGI:MGI:4452277 NCBI chrNW_004936629:3,453,384...3,570,250 JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 ISO (MGI:MGI:4452277|PMID:20223754) MGI PMID:20223754 MGI:MGI:4452277 NCBI chrNW_004936740:228,377...242,318 JBrowse link
planar dichotomous subdivision of terminal units involved in lung branching morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Celsr1 cadherin EGF LAG seven-pass G-type receptor 1 ISO (MGI:MGI:4452277|PMID:20223754) MGI PMID:20223754 MGI:MGI:4452277 NCBI chrNW_004936629:3,453,384...3,570,250 JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 ISO (MGI:MGI:4452277|PMID:20223754) MGI PMID:20223754 MGI:MGI:4452277 NCBI chrNW_004936740:228,377...242,318 JBrowse link
positive regulation blood vessel branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase ISO (MGI:MGI:5588737|PMID:24863063) BHF-UCL PMID:24863063 MGI:MGI:5588737 NCBI chrNW_004936487:17,690,206...17,819,619 JBrowse link
G Mdk midkine ISO (PMID:19060126) UniProt PMID:19060126 NCBI chrNW_004936562:2,687,825...2,690,292 JBrowse link
G Sirt6 sirtuin 6 ISO (PMID:23201774) BHF-UCL PMID:23201774 NCBI chrNW_004936588:2,387,162...2,394,066 JBrowse link
positive regulation of branching involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 ISO (MGI:MGI:4456940|PMID:17350185) UniProtKB PMID:17350185 MGI:MGI:4456940 NCBI chrNW_004936697:1,054,237...1,061,468 JBrowse link
G Ctnnb1 catenin beta 1 ISO (MGI:MGI:3801531|PMID:18533146) MGI PMID:18533146 MGI:MGI:3801531 NCBI chrNW_004936473:29,999,542...30,034,610 JBrowse link
G Pdgfra platelet derived growth factor receptor alpha ISO RGD PMID:8879189 RGD:11087558 NCBI chrNW_004936482:16,804,129...16,853,539 JBrowse link
positive regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen ISO (PMID:18607644) UniProtKB PMID:18607644 NCBI chrNW_004936484:19,713,299...19,721,144 JBrowse link
G Agtr1 angiotensin II receptor type 1 ISO PMID:17537984 UniProt PMID:17537984 RGD:1643596 NCBI chrNW_004936519:6,831,096...6,873,977 JBrowse link
G Agtr2 angiotensin II receptor type 2 ISO (MGI:MGI:3808848|PMID:18607644)
PMID:17537984
UniProtKB
UniProt
PMID:17537984, PMID:18607644 MGI:MGI:3808848, RGD:1643596 NCBI chrNW_004936479:13,252,678...13,255,570 JBrowse link
G Bmp4 bone morphogenetic protein 4 ISO PMID:17537984 UniProt PMID:17537984 RGD:1643596 NCBI chrNW_004936697:1,054,237...1,061,468 JBrowse link
G Gdnf glial cell derived neurotrophic factor ISO PMID:17537984
(MGI:MGI:5284782|PMID:17229286)
PMID:17522159
(PMID:17229286), (PMID:8657307)
UniProt
UniProtKB
PMID:8657307, PMID:17229286, PMID:17522159, PMID:17537984 MGI:MGI:5284782, RGD:1643596, RGD:8656002 NCBI chrNW_004936518:4,291,391...4,310,752 JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist ISO (MGI:MGI:3714585|PMID:17522159), (MGI:MGI:4949995|PMID:21281623) UniProt
MGI
PMID:17522159, PMID:21281623 MGI:MGI:3714585, MGI:MGI:4949995 NCBI chrNW_004936673:1,394,743...1,399,726 JBrowse link
G Hoxb7 homeobox B7 ISO (MGI:MGI:3833510|PMID:17881463) UniProtKB PMID:17881463 MGI:MGI:3833510 NCBI chrNW_004936490:12,777,005...12,780,515 JBrowse link
G Lgr4 leucine rich repeat containing G protein-coupled receptor 4 ISO (MGI:MGI:5006869|PMID:21523854) UniProtKB PMID:21523854 MGI:MGI:5006869 NCBI chrNW_004936540:5,752,319...5,846,074 JBrowse link
G Lhx1 LIM homeobox 1 ISO (MGI:MGI:3613206|PMID:16216236) UniProtKB PMID:16216236 MGI:MGI:3613206 NCBI chrNW_004936490:1,324,378...1,332,177 JBrowse link
G Maged1 MAGE family member D1 ISO (MGI:MGI:3848096|PMID:19268530) UniProtKB PMID:19268530 MGI:MGI:3848096 NCBI chrNW_004936909:493,998...592,649 JBrowse link
G Nog noggin ISO (MGI:MGI:2446986|PMID:12141440), (MGI:MGI:3714585|PMID:17522159) UniProtKB PMID:12141440, PMID:17522159 MGI:MGI:2446986, MGI:MGI:3714585 NCBI chrNW_004936490:6,262,651...6,264,069 JBrowse link
G Pax2 paired box 2 ISO (MGI:MGI:3704067|PMID:17314325), (MGI:MGI:3833510|PMID:17881463), (MGI:MGI:5009394|PMID:17538188) UniProtKB PMID:17314325, PMID:17538188, PMID:17881463 MGI:MGI:3704067, MGI:MGI:3833510, MGI:MGI:5009394 NCBI chrNW_004936600:4,850,594...4,939,010 JBrowse link
G Pax8 paired box 8 ISO (MGI:MGI:3704067|PMID:17314325) UniProtKB PMID:17314325 MGI:MGI:3704067 NCBI chrNW_004936783:1,523,658...1,553,464 JBrowse link
G Sall1 spalt like transcription factor 1 ISO (MGI:MGI:5563280|PMID:24550112) MGI PMID:24550112 MGI:MGI:5563280 NCBI chrNW_004936475:4,106,663...4,121,356 JBrowse link
G Six1 SIX homeobox 1 ISO (MGI:MGI:5009396|PMID:17300925)
(MGI:MGI:4949995|PMID:21281623)
UniProtKB
MGI
PMID:17300925, PMID:21281623 MGI:MGI:4949995, MGI:MGI:5009396 NCBI chrNW_004936495:4,839,496...4,842,906 JBrowse link
G Six4 SIX homeobox 4 ISO (MGI:MGI:5009396|PMID:17300925) UniProtKB PMID:17300925 MGI:MGI:5009396 NCBI chrNW_004936495:4,887,718...4,900,198 JBrowse link
G Smo smoothened, frizzled class receptor ISO (MGI:MGI:3611729|PMID:16396903) UniProtKB PMID:16396903 MGI:MGI:3611729 NCBI chrNW_004936579:5,893,064...5,917,021 JBrowse link
G Sox8 SRY-box transcription factor 8 ISO (MGI:MGI:4939090|PMID:21212101) UniProtKB PMID:21212101 MGI:MGI:4939090 NCBI chrNW_004936501:128,386...132,648 JBrowse link
G Sox9 SRY-box transcription factor 9 ISO (MGI:MGI:4939090|PMID:21212101) UniProtKB PMID:21212101 MGI:MGI:4939090 NCBI chrNW_004936655:1,849,044...1,852,648 JBrowse link
G Tgfb1 transforming growth factor beta 1 ISO PMID:17537984 UniProt PMID:17537984 RGD:1643596 NCBI chrNW_004936661:3,742,080...3,758,266 JBrowse link
G Vegfa vascular endothelial growth factor A ISO (MGI:MGI:3611700|PMID:16291795) UniProtKB PMID:16291795 MGI:MGI:3611700 NCBI chrNW_004936476:16,245,134...16,261,180 JBrowse link
G Wnt2b Wnt family member 2B ISO (MGI:MGI:2150217|PMID:11507767) MGI PMID:11507767 MGI:MGI:2150217 NCBI chrNW_004936690:1,077,538...1,094,005 JBrowse link
primary lung bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hhex hematopoietically expressed homeobox ISO (MGI:MGI:3703395|PMID:16364283) MGI PMID:16364283 MGI:MGI:3703395 NCBI chrNW_004936601:2,137,490...2,143,797 JBrowse link
G Rdh10 retinol dehydrogenase 10 ISO (MGI:MGI:3709664|PMID:17473173) MGI PMID:17473173 MGI:MGI:3709664 NCBI chrNW_004936648:2,060,131...2,088,021 JBrowse link
regulation of blood vessel branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fkbpl FKBP prolyl isomerase like ISO (MGI:MGI:5699248|PMID:25767277) MGI PMID:25767277 MGI:MGI:5699248 NCBI chrNW_004936727:1,474,052...1,475,602 JBrowse link
regulation of branch elongation involved in ureteric bud branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnf1b HNF1 homeobox B ISO (MGI:MGI:4430439|PMID:20040500) MGI PMID:20040500 MGI:MGI:4430439 NCBI chrNW_004936490:649,551...702,448 JBrowse link
G Six1 SIX homeobox 1 ISO (MGI:MGI:5009396|PMID:17300925) UniProtKB PMID:17300925 MGI:MGI:5009396 NCBI chrNW_004936495:4,839,496...4,842,906 JBrowse link
G Six4 SIX homeobox 4 ISO (MGI:MGI:5009396|PMID:17300925) UniProtKB PMID:17300925 MGI:MGI:5009396 NCBI chrNW_004936495:4,887,718...4,900,198 JBrowse link
regulation of branching involved in lung morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sox9 SRY-box transcription factor 9 ISO (MGI:MGI:5523731|PMID:24191021) MGI PMID:24191021 MGI:MGI:5523731 NCBI chrNW_004936655:1,849,044...1,852,648 JBrowse link
regulation of branching involved in mammary gland duct morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cav3 caveolin 3 ISO (MGI:MGI:3830397|PMID:19164602) MGI PMID:19164602 MGI:MGI:3830397 NCBI chrNW_004936602:4,264,896...4,278,160 JBrowse link
G Etv5 ETS variant transcription factor 5 ISO (MGI:MGI:2667785|PMID:12871699) MGI PMID:12871699 MGI:MGI:2667785 NCBI chrNW_004936578:3,795,000...3,854,269 JBrowse link
G Phb2 prohibitin 2 ISO (MGI:MGI:3695669|PMID:17065319) MGI PMID:17065319 MGI:MGI:3695669 NCBI chrNW_004936709:854,493...859,182 JBrowse link
G Tgfb1 transforming growth factor beta 1 ISO (MGI:MGI:3761053|PMID:17898001) MGI PMID:17898001 MGI:MGI:3761053 NCBI chrNW_004936661:3,742,080...3,758,266 JBrowse link
G Wnt5a Wnt family member 5A ISO (MGI:MGI:3761053|PMID:17898001) MGI PMID:17898001 MGI:MGI:3761053 NCBI chrNW_004936473:6,031,627...6,052,211 JBrowse link
regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Six2 SIX homeobox 2 ISO (MGI:MGI:3691408|PMID:17036046) UniProtKB PMID:17036046 MGI:MGI:3691408 NCBI chrNW_004936508:7,047,563...7,051,129 JBrowse link
tertiary branching involved in mammary gland duct morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ar androgen receptor ISO (MGI:MGI:2683859|PMID:14676301) MGI PMID:14676301 MGI:MGI:2683859 NCBI chrNW_004936635:485,903...647,820 JBrowse link
G Pgr progesterone receptor ISO (MGI:MGI:1354852|PMID:10733525) MGI PMID:10733525 MGI:MGI:1354852 NCBI chrNW_004936551:6,498,553...6,573,212 JBrowse link
G Wnt4 Wnt family member 4 ISO (MGI:MGI:1354852|PMID:10733525) MGI PMID:10733525 MGI:MGI:1354852 NCBI chrNW_004936474:7,623,462...7,635,416 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 11968
    developmental process 5628
      anatomical structure morphogenesis 2512
        tube morphogenesis 849
          branching morphogenesis of an epithelial tube 186
            branching involved in blood vessel morphogenesis + 41
            branching involved in lymph vessel morphogenesis 1
            branching involved in mammary gland duct morphogenesis + 29
            branching involved in open tracheal system development + 0
            branching involved in ureteric bud morphogenesis + 64
            epithelial tube branching involved in lung morphogenesis + 39
            tube fusion + 0
Path 2
Term Annotations click to browse term
  biological_process 11968
    developmental process 5628
      anatomical structure development 5266
        tissue development 1864
          epithelium development 1134
            morphogenesis of an epithelium 546
              epithelial tube morphogenesis 378
                branching morphogenesis of an epithelial tube 186
                  branching involved in blood vessel morphogenesis + 41
                  branching involved in lymph vessel morphogenesis 1
                  branching involved in mammary gland duct morphogenesis + 29
                  branching involved in open tracheal system development + 0
                  branching involved in ureteric bud morphogenesis + 64
                  epithelial tube branching involved in lung morphogenesis + 39
                  tube fusion + 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.