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ONTOLOGY REPORT - ANNOTATIONS


Term:animal organ maturation
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Accession:GO:0048799 term browser browse the term
Definition:A developmental process, independent of morphogenetic (shape) change, that is required for an animal organ to attain its fully functional state. An organ is a tissue or set of tissues that work together to perform a specific function or functions.


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bone maturation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgfr3 fibroblast growth factor receptor 3 ISO (MGI:MGI:4457789|PMID:20582225) RGD PMID:20582225 MGI:MGI:4457789 NCBI chr14:82,272,322...82,287,739
Ensembl chr14:82,273,070...82,287,706
JBrowse link
G Gh1 growth hormone 1 ISO (PMID:20110402) RGD PMID:20110402 NCBI chr10:94,486,204...94,488,181
Ensembl chr10:94,486,205...94,488,180
JBrowse link
G Mbtps2 membrane-bound transcription factor peptidase, site 2 ISO (PMID:27380894) RGD PMID:27380894 NCBI chr  X:40,258,933...40,309,047
Ensembl chr  X:40,258,493...40,310,563
JBrowse link
bone mineralization involved in bone maturation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ano6 anoctamin 6 ISO MGI:MGI:4127698 (MGI:MGI:5486117|PMID:22936354) RGD PMID:22936354 MGI:MGI:5486117 NCBI chr 7:137,142,063...137,335,208
Ensembl chr 7:137,142,170...137,335,208
JBrowse link
G Bmp2 bone morphogenetic protein 2 ISO
ISS
(PMID:16433617)
GO_REF:0000024
RGD
UniProt
PMID:16433617 GO_REF:0000024 NCBI chr 3:126,335,963...126,346,771
Ensembl chr 3:126,335,863...126,346,318
JBrowse link
G Ccdc154 coiled-coil domain containing 154 ISO MGI:MGI:5702426 (MGI:MGI:5697796|PMID:20121924) RGD PMID:20121924 MGI:MGI:5697796 NCBI chr10:14,518,240...14,529,920
Ensembl chr10:14,519,164...14,528,277
JBrowse link
G Ift80 intraflagellar transport 80 ISO MGI:MGI:3689350|MGI:MGI:5818514 (MGI:MGI:5807019|PMID:26996322) RGD PMID:26996322 MGI:MGI:5807019 NCBI chr 2:165,506,878...165,600,748
Ensembl chr 2:165,505,810...165,600,748
JBrowse link
G Igf1 insulin-like growth factor 1 ISO
IEA
(PMID:16433617)
GO_REF:0000107
RGD
Ensembl
PMID:16433617 GO_REF:0000107 NCBI chr 7:28,412,123...28,491,815
Ensembl chr 7:28,412,198...28,486,609
JBrowse link
G Lep leptin IDA RGD PMID:21353474 RGD:5128507 NCBI chr 4:56,337,695...56,351,818
Ensembl chr 4:56,337,695...56,351,818
JBrowse link
G Phospho1 phosphoethanolamine/phosphocholine phosphatase 1 ISO
IBA
MGI:MGI:5049904 (MGI:MGI:5008224|PMID:21272676)
PMID:21873635
RGD PMID:21272676, PMID:21873635 MGI:MGI:5008224, RGD:13792537 NCBI chr10:83,635,557...83,643,862
Ensembl chr10:83,636,518...83,643,859
JBrowse link
G Snx10 sorting nexin 10 ISO MGI:MGI:5690193 (MGI:MGI:5688814|PMID:25811986) RGD PMID:25811986 MGI:MGI:5688814 NCBI chr 4:81,311,490...81,375,248
Ensembl chr 4:81,311,490...81,374,158
JBrowse link
negative regulation of bone mineralization involved in bone maturation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Grem1 gremlin 1, DAN family BMP antagonist ISO (PMID:15539560) RGD PMID:15539560 NCBI chr 3:105,203,309...105,214,989
Ensembl chr 3:105,203,309...105,214,989
JBrowse link
G Pth parathyroid hormone IMP PMID:11604398 CAFA PMID:11604398 RGD:12793028 NCBI chr 1:178,215,829...178,218,761
Ensembl chr 1:178,215,829...178,218,761
JBrowse link
G Rflna refilin A ISO
IBA
MGI:MGI:1923816 (MGI:MGI:5570967|PMID:24436304)
PMID:21873635
RGD PMID:24436304, PMID:21873635 MGI:MGI:5570967, RGD:13792537 NCBI chr12:37,038,732...37,047,628
Ensembl chr12:37,038,733...37,047,628
JBrowse link
G Rflnb refilin B ISO
IBA
MGI:MGI:1920371 (MGI:MGI:5570967|PMID:24436304)
PMID:21873635
RGD PMID:24436304, PMID:21873635 MGI:MGI:5570967, RGD:13792537 NCBI chr10:64,196,103...64,202,380
Ensembl chr10:64,196,127...64,202,380
JBrowse link
ossification involved in bone maturation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dchs1 dachsous cadherin-related 1 ISO MGI:MGI:4867020 (MGI:MGI:4939936|PMID:21303848) RGD PMID:21303848 MGI:MGI:4939936 NCBI chr 1:170,594,981...170,629,062
Ensembl chr 1:170,594,822...170,628,915
JBrowse link
G Fat4 FAT atypical cadherin 4 ISO MGI:MGI:3846573 (MGI:MGI:4939936|PMID:21303848) RGD PMID:21303848 MGI:MGI:4939936 NCBI chr 2:125,751,818...125,879,398
Ensembl chr 2:125,752,130...125,879,387
JBrowse link
G Plxnb1 plexin B1 ISO (MGI:MGI:5297297|PMID:22019888) RGD PMID:22019888 MGI:MGI:5297297 NCBI chr 8:117,832,826...117,858,515
Ensembl chr 8:117,836,701...117,856,689
JBrowse link
G Rhoa ras homolog family member A ISO (MGI:MGI:5297297|PMID:22019888) RGD PMID:22019888 MGI:MGI:5297297 NCBI chr 8:117,082,440...117,116,244
Ensembl chr 8:117,106,576...117,116,167
JBrowse link
G Ryr1 ryanodine receptor 1 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:3764002|PMID:18003898)
Ensembl
UniProt
RGD
PMID:18003898 GO_REF:0000024, GO_REF:0000107, MGI:MGI:3764002 NCBI chr 1:87,959,596...88,066,252
Ensembl chr 1:87,959,712...88,066,101
JBrowse link
G Sema4d semaphorin 4D ISO
IBA
(PMID:22019888)
PMID:21873635
(MGI:MGI:5297297|PMID:22019888)
RGD PMID:22019888, PMID:21873635 MGI:MGI:5297297, RGD:13792537 NCBI chr17:13,516,276...13,538,513
Ensembl chr17:13,488,376...13,553,974
JBrowse link
G Thbs3 thrombospondin 3 ISO MGI:MGI:3581964 (MGI:MGI:3581317|PMID:15964815) RGD PMID:15964815 MGI:MGI:3581317 NCBI chr 2:188,528,979...188,540,738
Ensembl chr 2:188,528,979...188,540,736
JBrowse link
G Xylt1 xylosyltransferase 1 ISS
ISO
GO_REF:0000024
(MGI:MGI:5544658|PMID:24161523)
UniProt
RGD
PMID:24161523 GO_REF:0000024, MGI:MGI:5544658 NCBI chr 1:186,939,698...187,264,758
Ensembl chr 1:187,149,453...187,261,632
JBrowse link
positive regulation of bone mineralization involved in bone maturation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn3 actinin alpha 3 ISO (MGI:MGI:5291888|PMID:21784188) RGD PMID:21784188 MGI:MGI:5291888 NCBI chr 1:220,120,532...220,136,460
Ensembl chr 1:220,120,533...220,136,470
JBrowse link
G Asxl2 ASXL transcriptional regulator 2 ISO MGI:MGI:3840841 (MGI:MGI:5514358|PMID:21490954) RGD PMID:21490954 MGI:MGI:5514358 NCBI chr 6:27,835,346...27,919,285
Ensembl chr 6:27,887,797...27,915,563
JBrowse link
ureter maturation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a2 aldehyde dehydrogenase 1 family, member A2 ISO MGI:MGI:1857891 (MGI:MGI:4949948|PMID:21521737) RGD PMID:21521737 MGI:MGI:4949948 NCBI chr 8:77,640,234...77,719,488
Ensembl chr 8:77,640,222...77,719,489
JBrowse link
G Gata3 GATA binding protein 3 ISO MGI:MGI:3719568 (MGI:MGI:4949948|PMID:21521737) RGD PMID:21521737 MGI:MGI:4949948 NCBI chr17:72,419,752...72,452,043
Ensembl chr17:72,429,618...72,450,681
JBrowse link
G Pax2 paired box 2 ISO
ISS
(MGI:MGI:3833510|PMID:17881463)
GO_REF:0000024
RGD
UniProt
PMID:17881463 GO_REF:0000024, MGI:MGI:3833510 NCBI chr 1:264,493,579...264,585,073
Ensembl chr 1:264,504,591...264,583,329
JBrowse link
G Ret ret proto-oncogene ISO MGI:MGI:2136894 (MGI:MGI:4949948|PMID:21521737) RGD PMID:21521737 MGI:MGI:4949948 NCBI chr 4:150,202,170...150,249,196
Ensembl chr 4:150,202,058...150,244,372
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20028
    developmental process 6827
      anatomical structure development 6269
        animal organ development 4035
          animal organ maturation 29
            bone maturation + 25
            ganglion maturation + 0
            pronephros maturation + 0
            swim bladder maturation + 0
            ureter maturation 4
Path 2
Term Annotations click to browse term
  biological_process 20028
    developmental process 6827
      anatomical structure development 6269
        multicellular organism development 5744
          system development 5280
            animal organ development 4035
              animal organ maturation 29
                bone maturation + 25
                ganglion maturation + 0
                pronephros maturation + 0
                swim bladder maturation + 0
                ureter maturation 4
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.