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ONTOLOGY REPORT - ANNOTATIONS


Term:otolith development
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Accession:GO:0048840 term browser browse the term
Definition:The process whose specific outcome is the progression of the otolith over time, from its formation to the mature structure.
Synonyms:only_in_taxon: NCBITaxon:7742 ! Vertebrata


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otolith development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATG5 autophagy related 5 ISO (MGI:MGI:4829568|PMID:20577052) MGI PMID:20577052 MGI:MGI:4829568 NCBI chr 6:103,997,824...104,140,931
Ensembl chr 6:107,871,208...108,013,807
JBrowse link
G NOX3 NADPH oxidase 3 ISO (MGI:MGI:1351720|PMID:10491954) MGI PMID:10491954 MGI:MGI:1351720 NCBI chr 6:153,210,190...153,270,955
Ensembl chr 6:159,174,261...159,234,642
JBrowse link
otolith mineralization term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP2B2 ATPase plasma membrane Ca2+ transporting 2 ISO (MGI:MGI:1275896|PMID:9668038) MGI PMID:9668038 MGI:MGI:1275896 NCBI chr 3:10,260,556...10,643,346
Ensembl chr 3:10,611,619...10,738,006
JBrowse link
G OC90 otoconin 90 ISO (MGI:MGI:5896790|PMID:21655225), (MGI:MGI:6189500|PMID:24748133) UniProtKB PMID:21655225, PMID:24748133 MGI:MGI:5896790, MGI:MGI:6189500 NCBI chr 8:128,672,427...128,708,307 JBrowse link
G OTOL1 otolin 1 ISO (MGI:MGI:5896790|PMID:21655225), (MGI:MGI:6189500|PMID:24748133), (MGI:MGI:6189669|PMID:29076638) UniProtKB PMID:21655225, PMID:24748133, PMID:29076638 MGI:MGI:5896790, MGI:MGI:6189500, MGI:MGI:6189669 NCBI chr 3:158,439,309...158,518,591
Ensembl chr 3:166,488,898...166,566,031
JBrowse link
otolith morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BLOC1S5 biogenesis of lysosomal organelles complex 1 subunit 5 ISO (MGI:MGI:53623|PMID:5367369) MGI PMID:5367369 MGI:MGI:53623 NCBI chr 6:7,852,340...7,902,880
Ensembl chr 6:8,133,721...8,184,194
JBrowse link
G LRIG1 leucine rich repeats and immunoglobulin like domains 1 ISO (MGI:MGI:5519140|PMID:24086156) MGI PMID:24086156 MGI:MGI:5519140 NCBI chr 3:66,271,849...66,394,056
Ensembl chr 3:67,644,289...67,765,194
JBrowse link
G LRIG3 leucine rich repeats and immunoglobulin like domains 3 ISO (MGI:MGI:5519140|PMID:24086156) MGI PMID:24086156 MGI:MGI:5519140 NCBI chr12:30,012,251...30,060,570
Ensembl chr12:30,275,498...30,323,358
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12564
    developmental process 5839
      anatomical structure development 5452
        otolith development 8
          otolith mineralization + 3
          otolith morphogenesis + 3
          otolith tethering 0
Path 2
Term Annotations click to browse term
  biological_process 12564
    developmental process 5839
      anatomical structure development 5452
        multicellular organism development 4984
          system development 4688
            animal organ development 3618
              sensory organ development 645
                ear development 259
                  inner ear development 233
                    otolith development 8
                      otolith mineralization + 3
                      otolith morphogenesis + 3
                      otolith tethering 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.