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ONTOLOGY REPORT - ANNOTATIONS


Term:otolith development
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Accession:GO:0048840 term browser browse the term
Definition:The process whose specific outcome is the progression of the otolith over time, from its formation to the mature structure.
Synonyms:only_in_taxon: NCBITaxon:7742 ! Vertebrata


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otolith development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATG5 autophagy related 5 IEA Ensembl GO_REF:0000107 NCBI chr12:63,565,859...63,692,383
Ensembl chr12:63,567,568...63,683,485
JBrowse link
G NOX3 NADPH oxidase 3 IEA Ensembl GO_REF:0000107 NCBI chr 1:45,129,112...45,186,510
Ensembl chr 1:45,128,958...45,186,510
JBrowse link
otolith mineralization term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP2B2 ATPase plasma membrane Ca2+ transporting 2 ISO (MGI:MGI:1275896|PMID:9668038) MGI PMID:9668038 MGI:MGI:1275896 NCBI chr20:7,665,468...8,037,407
Ensembl chr20:7,749,807...8,034,474
JBrowse link
G OC90 otoconin 90 ISO (MGI:MGI:5896790|PMID:21655225), (MGI:MGI:6189500|PMID:24748133) UniProtKB PMID:21655225, PMID:24748133 MGI:MGI:5896790, MGI:MGI:6189500 NCBI chr13:28,680,910...28,700,816 JBrowse link
G OTOL1 otolin 1 IEA Ensembl GO_REF:0000107 NCBI chr34:27,405,456...27,454,726
Ensembl chr34:27,413,694...27,455,023
JBrowse link
otolith morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BLOC1S5 biogenesis of lysosomal organelles complex 1 subunit 5 IEA Ensembl GO_REF:0000107 NCBI chr35:7,860,336...7,998,461
Ensembl chr35:7,955,923...7,998,505
JBrowse link
G LRIG1 leucine rich repeats and immunoglobulin like domains 1 IEA Ensembl GO_REF:0000107 NCBI chr20:24,907,904...25,033,841
Ensembl chr20:24,890,191...25,032,647
JBrowse link
G LRIG3 leucine rich repeats and immunoglobulin like domains 3 IEA Ensembl GO_REF:0000107 NCBI chr10:2,723,836...2,772,630
Ensembl chr10:2,724,951...2,772,636
JBrowse link
G TTC39C tetratricopeptide repeat domain 39C IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:64,242,157...64,306,963
Ensembl chr 7:64,244,716...64,306,941
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16187
    developmental process 6309
      anatomical structure development 5857
        otolith development 9
          otolith mineralization + 3
          otolith morphogenesis + 4
          otolith tethering 0
Path 2
Term Annotations click to browse term
  biological_process 16187
    developmental process 6309
      anatomical structure development 5857
        multicellular organism development 5350
          system development 4984
            animal organ development 3823
              sensory organ development 679
                ear development 259
                  inner ear development 233
                    otolith development 9
                      otolith mineralization + 3
                      otolith morphogenesis + 4
                      otolith tethering 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.