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ONTOLOGY REPORT - ANNOTATIONS


Term:otolith development
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Accession:GO:0048840 term browser browse the term
Definition:The process whose specific outcome is the progression of the otolith over time, from its formation to the mature structure.
Synonyms:only_in_taxon: NCBITaxon:7742 ! Vertebrata


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otolith development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATG5 autophagy related 5 IEA Ensembl GO_REF:0000107 NCBI chr 6:106,184,476...106,325,789
Ensembl chr 6:106,045,423...106,325,791
JBrowse link
G NOX3 NADPH oxidase 3 IEA Ensembl GO_REF:0000107 NCBI chr 6:155,395,368...155,455,839
Ensembl chr 6:155,395,368...155,455,839
JBrowse link
otolith formation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLC44A4 solute carrier family 44 member 4 ISS UniProtKB GO_REF:0000024 NCBI chr 6:31,863,192...31,878,997
Ensembl chr 6:31,863,192...31,879,046
JBrowse link
otolith mineralization term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP2B2 ATPase plasma membrane Ca2+ transporting 2 ISO (MGI:MGI:1275896|PMID:9668038) MGI PMID:9668038 MGI:MGI:1275896 NCBI chr 3:10,324,023...10,707,962
Ensembl chr 3:10,324,023...10,708,007
JBrowse link
G OC90 otoconin 90 ISS UniProtKB GO_REF:0000024 NCBI chr 8:132,024,216...132,059,382
Ensembl chr 8:132,024,216...132,059,382
JBrowse link
G OTOL1 otolin 1 ISS UniProtKB GO_REF:0000024 NCBI chr 3:161,496,808...161,503,942
Ensembl chr 3:161,496,808...161,503,942
JBrowse link
otolith morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BLOC1S5 biogenesis of lysosomal organelles complex 1 subunit 5 ISO (MGI:MGI:53623|PMID:5367369) MGI PMID:5367369 MGI:MGI:53623 NCBI chr 6:8,013,567...8,064,414
Ensembl chr 6:8,013,567...8,064,396
JBrowse link
G LRIG1 leucine rich repeats and immunoglobulin like domains 1 IEA Ensembl GO_REF:0000107 NCBI chr 3:66,378,797...66,501,121
Ensembl chr 3:66,378,797...66,501,263
JBrowse link
G LRIG3 leucine rich repeats and immunoglobulin like domains 3 IEA Ensembl GO_REF:0000107 NCBI chr12:58,872,155...58,920,519
Ensembl chr12:58,872,149...58,920,504
Ensembl chr12:58,872,149...58,920,504
JBrowse link
G TTC39C tetratricopeptide repeat domain 39C IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr18:23,992,843...24,135,970
Ensembl chr18:23,992,773...24,135,610
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18670
    developmental process 7464
      anatomical structure development 6871
        otolith development 10
          otolith mineralization + 3
          otolith morphogenesis + 5
          otolith tethering 0
Path 2
Term Annotations click to browse term
  biological_process 18670
    developmental process 7464
      anatomical structure development 6871
        multicellular organism development 6344
          system development 5748
            animal organ development 4414
              sensory organ development 712
                ear development 270
                  inner ear development 242
                    otolith development 10
                      otolith mineralization + 3
                      otolith morphogenesis + 5
                      otolith tethering 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.