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ONTOLOGY REPORT - ANNOTATIONS


Term:otolith development
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Accession:GO:0048840 term browser browse the term
Definition:The process whose specific outcome is the progression of the otolith over time, from its formation to the mature structure.
Synonyms:only_in_taxon: NCBITaxon:7742 ! Vertebrata


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otolith development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg5 autophagy related 5 IMP (MGI:MGI:4829568|PMID:20577052) MGI PMID:20577052 MGI:MGI:4829568 NCBI chr10:44,268,322...44,364,299
Ensembl chr10:44,268,358...44,364,291
JBrowse link
G Nox3 NADPH oxidase 3 IMP (MGI:MGI:1351720|PMID:10491954) MGI PMID:10491954 MGI:MGI:1351720 NCBI chr17:3,635,240...3,696,261
Ensembl chr17:3,635,240...3,696,261
JBrowse link
otolith mineralization term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b2 ATPase, Ca++ transporting, plasma membrane 2 IMP (MGI:MGI:1275896|PMID:9668038) MGI PMID:9668038 MGI:MGI:1275896 NCBI chr 6:113,743,831...114,042,613
Ensembl chr 6:113,743,831...114,042,613
JBrowse link
G Oc90 otoconin 90 IDA (MGI:MGI:5896790|PMID:21655225), (MGI:MGI:6189500|PMID:24748133) UniProtKB PMID:21655225, PMID:24748133 MGI:MGI:5896790, MGI:MGI:6189500 NCBI chr15:65,876,050...65,912,411
Ensembl chr15:65,876,053...65,912,397
JBrowse link
G Otol1 otolin 1 IDA (MGI:MGI:5896790|PMID:21655225), (MGI:MGI:6189500|PMID:24748133), (MGI:MGI:6189669|PMID:29076638) UniProtKB PMID:21655225, PMID:24748133, PMID:29076638 MGI:MGI:5896790, MGI:MGI:6189500, MGI:MGI:6189669 NCBI chr 3:70,007,613...70,028,708
Ensembl chr 3:70,007,613...70,028,708
JBrowse link
otolith morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bloc1s5 biogenesis of lysosomal organelles complex-1, subunit 5, muted IMP (MGI:MGI:53623|PMID:5367369) MGI PMID:5367369 MGI:MGI:53623 NCBI chr13:38,602,698...38,637,117
Ensembl chr13:38,592,842...38,635,109
JBrowse link
G Lrig1 leucine-rich repeats and immunoglobulin-like domains 1 IGI (MGI:MGI:5519140|PMID:24086156) MGI PMID:24086156 MGI:MGI:5519140 NCBI chr 6:94,604,529...94,700,298
Ensembl chr 6:94,604,529...94,700,158
JBrowse link
G Lrig3 leucine-rich repeats and immunoglobulin-like domains 3 IGI (MGI:MGI:5519140|PMID:24086156) MGI PMID:24086156 MGI:MGI:5519140 NCBI chr10:125,966,219...126,015,359
Ensembl chr10:125,966,168...126,015,359
JBrowse link
G Ttc39c tetratricopeptide repeat domain 39C IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr18:12,583,103...12,739,404
Ensembl chr18:12,599,896...12,738,863
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 23392
    developmental process 7030
      anatomical structure development 6504
        otolith development 9
          otolith mineralization + 3
          otolith morphogenesis + 4
          otolith tethering 0
Path 2
Term Annotations click to browse term
  biological_process 23392
    developmental process 7030
      anatomical structure development 6504
        multicellular organism development 5967
          system development 5379
            animal organ development 4136
              sensory organ development 696
                ear development 268
                  inner ear development 240
                    otolith development 9
                      otolith mineralization + 3
                      otolith morphogenesis + 4
                      otolith tethering 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.