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ONTOLOGY REPORT - ANNOTATIONS


Term:artery morphogenesis
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Accession:GO:0048844 term browser browse the term
Definition:The process in which the anatomical structures of arterial blood vessels are generated and organized. Arteries are blood vessels that transport blood from the heart to the body and its organs.
Synonyms:exact_synonym: arterial morphogenesis;   arteriogenesis


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artery morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Angptl3 angiopoietin-like 3 ISO (MGI:2664626|PMID:12671033) RGD PMID:12671033 MGI:2664626 NCBI chr 5:117,698,590...117,706,729
Ensembl chr 5:117,698,764...117,705,808
JBrowse link
G Apob apolipoprotein B ISO MGI:88057 (MGI:3695082|PMID:16230502) RGD PMID:16230502 MGI:3695082 NCBI chr 6:33,176,826...33,216,381
Ensembl chr 6:33,176,778...33,224,997
JBrowse link
G Apoe apolipoprotein E ISO MGI:88052 (MGI:3695082|PMID:16230502) RGD PMID:16230502 MGI:3695082 NCBI chr 1:80,612,894...80,616,820
Ensembl chr 1:80,612,895...80,617,057
JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 ISO MGI:98493 (MGI:4397600|PMID:19855134) RGD PMID:19855134 MGI:4397600 NCBI chr 5:21,769,087...21,952,036
Ensembl chr 5:21,830,882...21,950,696
JBrowse link
G Comp cartilage oligomeric matrix protein IEA
ISO
GO_REF:0000107
(MGI:6100855|PMID:27151399)
Ensembl
RGD
PMID:27151399 GO_REF:0000107, MGI:6100855 NCBI chr16:20,798,437...20,807,070
Ensembl chr16:20,798,437...20,807,070
JBrowse link
G Eng endoglin ISO (MGI:1337912|PMID:10348742) RGD PMID:10348742 MGI:1337912 NCBI chr 3:11,679,530...11,717,486
Ensembl chr 3:11,679,530...11,717,485
JBrowse link
G Foxc1 forkhead box C1 ISO MGI:1857869 (MGI:1345536|PMID:10479458) RGD PMID:10479458 MGI:1345536 NCBI chr17:33,947,501...33,951,484
Ensembl chr17:33,947,506...33,951,484
JBrowse link
G Foxc2 forkhead box C2 ISO MGI:1857740|MGI:1857865 (MGI:1339313|PMID:9409679), (MGI:1345536|PMID:10479458) RGD PMID:9409679, PMID:10479458 MGI:1339313, MGI:1345536 NCBI chr19:53,044,379...53,047,081
Ensembl chr19:53,044,379...53,047,081
JBrowse link
G Gja5 gap junction protein, alpha 5 ISO (MGI:4462093|PMID:20530546) RGD PMID:20530546 MGI:4462093 NCBI chr 2:199,162,745...199,184,942
Ensembl chr 2:199,162,745...199,184,939
JBrowse link
G Hes1 hes family bHLH transcription factor 1 ISO (MGI:4453944|PMID:20122914) RGD PMID:20122914 MGI:4453944 NCBI chr11:74,312,837...74,315,249
Ensembl chr11:74,312,806...74,315,248
JBrowse link
G Hoxa1 homeobox A1 ISO (PMID:16155570) RGD PMID:16155570 NCBI chr 4:82,124,358...82,127,182
Ensembl chr 4:82,125,406...82,127,066
JBrowse link
G Hoxa13 homeo box A13 ISO MGI:2152356 (MGI:3797428|PMID:18483557) RGD PMID:18483557 MGI:3797428 Ensembl chr 4:82,228,017...82,229,397 JBrowse link
G Ldlr low density lipoprotein receptor IEA
ISO
GO_REF:0000107
(MGI:5581894|PMID:22927332)
Ensembl
RGD
PMID:22927332 GO_REF:0000107, MGI:5581894 NCBI chr 8:22,750,425...22,773,305
Ensembl chr 8:22,750,336...22,774,903
JBrowse link
G Nf1 neurofibromin 1 IEA
ISO
ISS
GO_REF:0000107
MGI:1857444 (MGI:66069|PMID:7926784)
GO_REF:0000024
Ensembl
RGD
HGNC
PMID:7926784 GO_REF:0000024, GO_REF:0000107, MGI:66069 NCBI chr10:66,732,460...66,928,706
Ensembl chr10:66,690,133...66,928,903
JBrowse link
G Notch3 notch receptor 3 IEA
ISO
GO_REF:0000107
MGI:2687010 (MGI:5609934|PMID:23117660)
Ensembl
RGD
PMID:23117660 GO_REF:0000107, MGI:5609934 NCBI chr 7:14,138,495...14,189,688
Ensembl chr 7:14,138,495...14,189,688
JBrowse link
G Nrp1 neuropilin 1 ISO (MGI:5490930|PMID:23639442), (MGI:5562961|PMID:24401374) RGD PMID:23639442, PMID:24401374 MGI:5490930, MGI:5562961 NCBI chr19:61,332,351...61,486,166
Ensembl chr19:61,332,351...61,485,858
JBrowse link
G Prdm1 PR/SET domain 1 ISO MGI:3605483|MGI:3605621|MGI:98493 (MGI:5585355|PMID:24821700) RGD PMID:24821700 MGI:5585355 NCBI chr20:49,464,921...49,556,623
Ensembl chr20:49,464,919...49,556,518
JBrowse link
G Prrx1 paired related homeobox 1 ISO MGI:1857640|MGI:98218 (MGI:1353388|PMID:10664157) RGD PMID:10664157 MGI:1353388 NCBI chr13:81,147,038...81,215,559
Ensembl chr13:81,147,348...81,214,546
JBrowse link
G Prrx2 paired related homeobox 2 ISO MGI:97712 (MGI:1353388|PMID:10664157) RGD PMID:10664157 MGI:1353388 NCBI chr 3:9,681,871...9,718,051
Ensembl chr 3:9,681,871...9,718,051
JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region ISO MGI:3583755 (MGI:5609934|PMID:23117660) RGD PMID:23117660 MGI:5609934 NCBI chr14:59,657,738...59,865,427
Ensembl chr14:59,658,935...59,735,450
JBrowse link
G Smad7 SMAD family member 7 IEA
ISO
GO_REF:0000107
(MGI:3836072|PMID:18952608)
Ensembl
RGD
PMID:18952608 GO_REF:0000107, MGI:3836072 NCBI chr18:71,395,830...71,424,164
Ensembl chr18:71,395,830...71,424,157
JBrowse link
G Stra6 signaling receptor and transporter of retinol STRA6 ISO (PMID:17273977) RGD PMID:17273977 NCBI chr 8:62,925,364...62,944,438
Ensembl chr 8:62,925,357...62,944,437
JBrowse link
G Tbx1 T-box transcription factor 1 ISS
ISO
GO_REF:0000024
MGI:2179190|MGI:2444748|MGI:95668|MGI:99655 (MGI:2138050|PMID:11242110), (MGI:4358009|PMID:19700621), (MGI:4397600|PMID:19855134), (MGI:5585355|PMID:24821700)
UniProt
RGD
PMID:11242110, PMID:19700621, PMID:19855134, PMID:24821700 GO_REF:0000024, MGI:2138050, MGI:4358009, MGI:4397600, MGI:5585355 NCBI chr11:86,552,022...86,561,647
Ensembl chr11:86,552,022...86,560,969
JBrowse link
G Tgfbr1 transforming growth factor, beta receptor 1 ISO MGI:2386570|MGI:2388050 (MGI:3703113|PMID:17078885) RGD PMID:17078885 MGI:3703113 NCBI chr 5:63,056,071...63,119,635
Ensembl chr 5:63,050,758...63,119,635
JBrowse link
G Vegfa vascular endothelial growth factor A ISO MGI:1931047 (MGI:1339868|PMID:10229225) RGD PMID:10229225 MGI:1339868 NCBI chr 9:17,340,341...17,355,681
Ensembl chr 9:17,340,341...17,355,681
JBrowse link
G Wnt11 Wnt family member 11 ISO MGI:2665014 (MGI:3759355|PMID:17767158) RGD PMID:17767158 MGI:3759355 NCBI chr 1:163,794,136...163,813,756
Ensembl chr 1:163,797,660...163,813,756
JBrowse link
G Zmiz1 zinc finger, MIZ-type containing 1 ISO MGI:3769389 (MGI:3768282|PMID:17967885) RGD PMID:17967885 MGI:3768282 NCBI chr16:1,749,191...1,954,633
Ensembl chr16:1,749,191...1,954,614
JBrowse link
aorta morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts9 ADAM metallopeptidase with thrombospondin type 1 motif, 9 ISO (MGI:4452308|PMID:20096780) RGD PMID:20096780 MGI:4452308 NCBI chr 4:124,660,254...124,860,997
Ensembl chr 4:124,660,262...124,858,250
JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 ISO MGI:2176467|MGI:4433295 (MGI:5694290|PMID:26102480) RGD PMID:26102480 MGI:5694290 NCBI chr 5:21,769,087...21,952,036
Ensembl chr 5:21,830,882...21,950,696
JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 ISO MGI:102780|MGI:98493|MGI:99604 (MGI:5002778|PMID:21364285) RGD PMID:21364285 MGI:5002778 NCBI chr 5:4,275,728...4,495,525
Ensembl chr 5:4,373,626...4,513,142
JBrowse link
G Fgf8 fibroblast growth factor 8 ISO MGI:102780|MGI:109344|MGI:98493 (MGI:5002778|PMID:21364285) RGD PMID:21364285 MGI:5002778 NCBI chr 1:265,492,949...265,498,965
Ensembl chr 1:265,493,124...265,498,831
JBrowse link
G Fkbp10 FKBP prolyl isomerase 10 ISO MGI:5432211 (MGI:5585367|PMID:24777781) RGD PMID:24777781 MGI:5585367 NCBI chr10:88,326,337...88,338,199
Ensembl chr10:88,326,080...88,338,207
JBrowse link
G Foxh1 forkhead box H1 ISO (MGI:3055632|PMID:15363409) RGD PMID:15363409 MGI:3055632 NCBI chr 7:117,730,307...117,733,076
Ensembl chr 7:117,730,307...117,732,387
JBrowse link
G Hes1 hes family bHLH transcription factor 1 ISO (MGI:4453944|PMID:20122914) RGD PMID:20122914 MGI:4453944 NCBI chr11:74,312,837...74,315,249
Ensembl chr11:74,312,806...74,315,248
JBrowse link
G Jag1 jagged canonical Notch ligand 1 IEA
ISO
GO_REF:0000107
(MGI:4359139|PMID:19509466)
Ensembl
RGD
PMID:19509466 GO_REF:0000107, MGI:4359139 NCBI chr 3:130,079,361...130,114,781
Ensembl chr 3:130,079,361...130,114,770
JBrowse link
G Kat6a lysine acetyltransferase 6A ISO MGI:4418468|MGI:98493 (MGI:5442217|PMID:22921202) RGD PMID:22921202 MGI:5442217 NCBI chr16:73,942,669...74,020,750
Ensembl chr16:73,943,455...74,023,005
JBrowse link
G Lrp1 LDL receptor related protein 1 ISO (MGI:4365879|PMID:19742316) RGD PMID:19742316 MGI:4365879 NCBI chr 7:70,846,313...70,927,028
Ensembl chr 7:70,846,344...70,926,903
JBrowse link
G Nprl3 NPR3-like, GATOR1 complex subunit ISO MGI:5426855 (MGI:5319707|PMID:22538705) RGD PMID:22538705 MGI:5319707 NCBI chr10:15,620,824...15,661,332
Ensembl chr10:15,620,871...15,661,331
JBrowse link
G Pdgfrb platelet derived growth factor receptor beta ISO UniProtKB:Q91ZX7 (MGI:4365879|PMID:19742316) RGD PMID:19742316 MGI:4365879 NCBI chr18:56,364,586...56,406,381
Ensembl chr18:56,364,620...56,406,381
JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component ISO MGI:4440621 (MGI:4439427|PMID:20215345) RGD PMID:20215345 MGI:4439427 NCBI chr 2:230,286,886...230,356,887
Ensembl chr 2:230,287,296...230,356,919
JBrowse link
G Six1 SIX homeobox 1 ISO MGI:109344|MGI:98493|MGI:99604 (MGI:5002778|PMID:21364285) RGD PMID:21364285 MGI:5002778 NCBI chr 6:95,929,060...95,934,296
Ensembl chr 6:95,929,060...95,934,296
JBrowse link
G Tbx1 T-box transcription factor 1 ISS
ISO
GO_REF:0000024
MGI:102780|MGI:109344|MGI:3664784|MGI:99604 (MGI:3770747|PMID:17916582), (MGI:5002778|PMID:21364285)
UniProt
RGD
PMID:17916582, PMID:21364285 GO_REF:0000024, MGI:3770747, MGI:5002778 NCBI chr11:86,552,022...86,561,647
Ensembl chr11:86,552,022...86,560,969
JBrowse link
G Tbx2 T-box transcription factor 2 ISO (MGI:3487212|PMID:15459098) RGD PMID:15459098 MGI:3487212 NCBI chr10:73,278,932...73,290,764
Ensembl chr10:73,279,119...73,289,921
JBrowse link
G Tfap2b transcription factor AP-2 beta ISS
ISO
GO_REF:0000024
(MGI:5287515|PMID:21829553)
UniProt
RGD
PMID:21829553 GO_REF:0000024, MGI:5287515 NCBI chr 9:25,410,669...25,440,568
Ensembl chr 9:25,410,669...25,440,411
JBrowse link
aorta smooth muscle tissue morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col3a1 collagen type III alpha 1 chain ISO (MGI:5307011|PMID:21071432) RGD PMID:21071432 MGI:5307011 NCBI chr 9:52,023,295...52,059,221
Ensembl chr 9:52,023,295...52,059,217
JBrowse link
G Mir143 microRNA 143 ISO MGI:2676830 (MGI:4443305|PMID:19816508) RGD PMID:19816508 MGI:4443305 NCBI chr18:56,971,273...56,971,377
Ensembl chr18:56,971,273...56,971,377
JBrowse link
G Mir145 microRNA 145 ISO MGI:2676828 (MGI:4443305|PMID:19816508) RGD PMID:19816508 MGI:4443305 NCBI chr18:56,969,907...56,969,994
Ensembl chr18:56,969,907...56,969,994
JBrowse link
G Mylk myosin light chain kinase ISO (PMID:21055718) RGD PMID:21055718 NCBI chr11:69,013,060...69,260,039
Ensembl chr11:69,013,050...69,223,158
JBrowse link
G Prox1 prospero homeobox 1 ISO (MGI:3830437|PMID:19091769) RGD PMID:19091769 MGI:3830437 NCBI chr13:108,382,536...108,444,107
Ensembl chr13:108,382,399...108,443,294
JBrowse link
ascending aorta morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hes1 hes family bHLH transcription factor 1 IEA
ISO
GO_REF:0000107
(MGI:4354447|PMID:19609448)
Ensembl
RGD
PMID:19609448 GO_REF:0000107, MGI:4354447 NCBI chr11:74,312,837...74,315,249
Ensembl chr11:74,312,806...74,315,248
JBrowse link
G Hey2 hes-related family bHLH transcription factor with YRPW motif 2 ISO (MGI:2386835|PMID:12372254) RGD PMID:12372254 MGI:2386835 NCBI chr 1:29,191,170...29,201,257
Ensembl chr 1:29,191,192...29,201,531
JBrowse link
G Sox4 SRY-box transcription factor 4 ISO (MGI:3603061|PMID:16109771) RGD PMID:16109771 MGI:3603061 NCBI chr17:37,615,022...37,619,728 JBrowse link
G Tgfb2 transforming growth factor, beta 2 ISO (MGI:894212|PMID:9217007) RGD PMID:9217007 MGI:894212 NCBI chr13:105,039,639...105,142,010
Ensembl chr13:105,039,853...105,141,030
JBrowse link
coronary artery morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arid2 AT-rich interaction domain 2 ISO MGI:4433303 (MGI:5649178|PMID:25299188) RGD PMID:25299188 MGI:5649178 NCBI chr 7:137,680,564...137,798,329
Ensembl chr 7:137,680,530...137,795,655
JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 IEA
ISO
GO_REF:0000107
MGI:3715149|MGI:4838016 (MGI:4948416|PMID:21350214)
Ensembl
RGD
PMID:21350214 GO_REF:0000107, MGI:4948416 NCBI chr16:36,371,489...36,373,551
Ensembl chr16:36,371,489...36,373,546
JBrowse link
G Lrp2 LDL receptor related protein 2 IEA
ISO
ISS
GO_REF:0000107
(MGI:5770180|PMID:26822476)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:26822476 GO_REF:0000024, GO_REF:0000107, MGI:5770180 NCBI chr 3:55,665,153...55,822,484
Ensembl chr 3:55,665,145...55,822,551
JBrowse link
G Notch1 notch receptor 1 ISO (MGI:5298073|PMID:21311046) RGD PMID:21311046 MGI:5298073 NCBI chr 3:3,905,562...3,951,015
Ensembl chr 3:3,905,453...3,951,025
JBrowse link
G Nrp1 neuropilin 1 ISO (MGI:5490930|PMID:23639442) RGD PMID:23639442 MGI:5490930 NCBI chr19:61,332,351...61,486,166
Ensembl chr19:61,332,351...61,485,858
JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component ISO MGI:4440621 (MGI:4439427|PMID:20215345) RGD PMID:20215345 MGI:4439427 NCBI chr 2:230,286,886...230,356,887
Ensembl chr 2:230,287,296...230,356,919
JBrowse link
G Tbx1 T-box transcription factor 1 ISS
ISO
GO_REF:0000024
MGI:2179190 (MGI:4353596|PMID:18583714)
UniProt
RGD
PMID:18583714 GO_REF:0000024, MGI:4353596 NCBI chr11:86,552,022...86,561,647
Ensembl chr11:86,552,022...86,560,969
JBrowse link
G Tgfbr1 transforming growth factor, beta receptor 1 ISO (MGI:3820811|PMID:18718461) RGD PMID:18718461 MGI:3820811 NCBI chr 5:63,056,071...63,119,635
Ensembl chr 5:63,050,758...63,119,635
JBrowse link
G Vegfa vascular endothelial growth factor A ISO (MGI:4461879|PMID:18093989) RGD PMID:18093989 MGI:4461879 NCBI chr 9:17,340,341...17,355,681
Ensembl chr 9:17,340,341...17,355,681
JBrowse link
dorsal aorta morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvrl1 activin A receptor like type 1 ISO (MGI:2674189|PMID:12941632) RGD PMID:12941632 MGI:2674189 NCBI chr 7:142,769,942...142,787,336
Ensembl chr 7:142,776,252...142,787,335
JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A ISO (MGI:3810850|PMID:18667463) RGD PMID:18667463 MGI:3810850 NCBI chr16:10,758,278...10,852,170
Ensembl chr16:10,758,527...10,802,512
JBrowse link
G Dll4 delta like canonical Notch ligand 4 ISO (MGI:3056004|PMID:15466160), (MGI:3056036|PMID:15466159) RGD PMID:15466159, PMID:15466160 MGI:3056004, MGI:3056036 NCBI chr 3:111,135,011...111,146,746
Ensembl chr 3:111,135,021...111,145,986
JBrowse link
G Eng endoglin ISO (MGI:2674189|PMID:12941632) RGD PMID:12941632 MGI:2674189 NCBI chr 3:11,679,530...11,717,486
Ensembl chr 3:11,679,530...11,717,485
JBrowse link
G Hey1 hes-related family bHLH transcription factor with YRPW motif 1 ISO UniProtKB:Q9QUS4 (MGI:3040159|PMID:15107403) RGD PMID:15107403 MGI:3040159 NCBI chr 2:95,320,147...95,322,701
Ensembl chr 2:95,320,283...95,322,696
JBrowse link
G Hey2 hes-related family bHLH transcription factor with YRPW motif 2 ISO UniProtKB:Q9WV93 (MGI:3040159|PMID:15107403) RGD PMID:15107403 MGI:3040159 NCBI chr 1:29,191,170...29,201,257
Ensembl chr 1:29,191,192...29,201,531
JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region ISO (MGI:3056004|PMID:15466160) RGD PMID:15466160 MGI:3056004 NCBI chr14:59,657,738...59,865,427
Ensembl chr14:59,658,935...59,735,450
JBrowse link
G Srf serum response factor ISO MGI:3522206|MGI:3522214 (MGI:3513738|PMID:15569937) RGD PMID:15569937 MGI:3513738 NCBI chr 9:16,737,637...16,747,226
Ensembl chr 9:16,737,642...16,747,225
JBrowse link
ductus arteriosus closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxf1 forkhead box F1 ISO (PMID:19500772) RGD PMID:19500772 NCBI chr19:53,012,306...53,016,100
Ensembl chr19:53,012,332...53,016,086
JBrowse link
G Hpgd 15-hydroxyprostaglandin dehydrogenase ISS
ISO
GO_REF:0000024
(MGI:2158520|PMID:11821873)
UniProt
RGD
PMID:11821873 GO_REF:0000024, MGI:2158520 NCBI chr16:37,457,134...37,495,758
Ensembl chr16:37,457,135...37,495,758
JBrowse link
G Myocd myocardin IEA
ISO
GO_REF:0000107
MGI:3773718 (MGI:3773460|PMID:18188448)
Ensembl
RGD
PMID:18188448 GO_REF:0000107, MGI:3773460 NCBI chr10:51,682,053...51,781,458
Ensembl chr10:51,683,540...51,778,986
JBrowse link
G Ptger4 prostaglandin E receptor 4 IMP RGD PMID:16303610 RGD:10003042 NCBI chr 2:54,951,625...54,966,470
Ensembl chr 2:54,952,821...54,963,448
JBrowse link
G Stra6 signaling receptor and transporter of retinol STRA6 ISO
IEA
(PMID:19500772)
GO_REF:0000107
RGD
Ensembl
PMID:19500772 GO_REF:0000107 NCBI chr 8:62,925,364...62,944,438
Ensembl chr 8:62,925,357...62,944,437
JBrowse link
G Tfap2b transcription factor AP-2 beta ISS
ISO
GO_REF:0000024
(MGI:5287515|PMID:21829553)
UniProt
RGD
PMID:21829553 GO_REF:0000024, MGI:5287515 NCBI chr 9:25,410,669...25,440,568
Ensembl chr 9:25,410,669...25,440,411
JBrowse link
negative regulation of ductus arteriosus closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptger4 prostaglandin E receptor 4 IMP RGD PMID:16303610 RGD:10003042 NCBI chr 2:54,951,625...54,966,470
Ensembl chr 2:54,952,821...54,963,448
JBrowse link
pharyngeal arch artery morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrf4 adhesion G protein-coupled receptor F4 ISO MGI:2182928 (MGI:5919853|PMID:28806758) RGD PMID:28806758 MGI:5919853 NCBI chr 9:20,951,249...20,982,493
Ensembl chr 9:20,951,260...20,982,487
JBrowse link
G Adgrf5 adhesion G protein-coupled receptor F5 IEA
ISO
GO_REF:0000107
MGI:1925499 (MGI:5919853|PMID:28806758)
Ensembl
RGD
PMID:28806758 GO_REF:0000107, MGI:5919853 NCBI chr 9:20,091,121...20,195,706
Ensembl chr 9:20,091,099...20,195,566
JBrowse link
G Bmp4 bone morphogenetic protein 4 IEA
ISO
GO_REF:0000107
(MGI:3039210|PMID:15070745)
Ensembl
RGD
PMID:15070745 GO_REF:0000107, MGI:3039210 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A ISO (MGI:3040576|PMID:15073157) RGD PMID:15073157 MGI:3040576 NCBI chr16:10,758,278...10,852,170
Ensembl chr16:10,758,527...10,802,512
JBrowse link
G Bmpr2 bone morphogenetic protein receptor type 2 NOT ISO (MGI:2429424|PMID:12441304)
(MGI:3851675|PMID:19409885)
RGD PMID:12441304, PMID:19409885 MGI:2429424, MGI:3851675 NCBI chr 9:66,568,074...66,683,019
Ensembl chr 9:66,568,074...66,676,494
JBrowse link
G Folr1 folate receptor alpha ISO (MGI:3721767|PMID:17286298) RGD PMID:17286298 MGI:3721767 NCBI chr 1:166,934,457...166,945,864
Ensembl chr 1:166,934,460...166,943,592
JBrowse link
G Hes1 hes family bHLH transcription factor 1 IEA
ISO
GO_REF:0000107
(MGI:4453944|PMID:20122914)
Ensembl
RGD
PMID:20122914 GO_REF:0000107, MGI:4453944 NCBI chr11:74,312,837...74,315,249
Ensembl chr11:74,312,806...74,315,248
JBrowse link
G Nog noggin IEA
ISO
GO_REF:0000107
(MGI:3783944|PMID:17218603)
Ensembl
RGD
PMID:17218603 GO_REF:0000107, MGI:3783944 NCBI chr10:76,811,759...76,813,386
Ensembl chr10:76,811,759...76,813,386
JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 ISO MGI:3605892 (MGI:5469230|PMID:23319608) RGD PMID:23319608 MGI:5469230 NCBI chr 8:22,648,323...22,739,468
Ensembl chr 8:22,648,323...22,739,468
JBrowse link
G Tgfb2 transforming growth factor, beta 2 ISO (MGI:3609313|PMID:11390347) RGD PMID:11390347 MGI:3609313 NCBI chr13:105,039,639...105,142,010
Ensembl chr13:105,039,853...105,141,030
JBrowse link
positive regulation of aorta morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Efnb2 ephrin B2 ISO MGI:2176476|MGI:3526818 (MGI:3832108|PMID:18952909) RGD PMID:18952909 MGI:3832108 NCBI chr16:86,631,151...86,672,050
Ensembl chr16:86,631,064...86,675,049
JBrowse link
G Ephb4 EPH receptor B4 ISO MGI:2183162 (MGI:3832108|PMID:18952909) RGD PMID:18952909 MGI:3832108 NCBI chr12:22,393,338...22,418,332
Ensembl chr12:22,393,330...22,417,980
JBrowse link
G Notch1 notch receptor 1 ISO (MGI:3832108|PMID:18952909) RGD PMID:18952909 MGI:3832108 NCBI chr 3:3,905,562...3,951,015
Ensembl chr 3:3,905,453...3,951,025
JBrowse link
G Notch4 notch receptor 4 ISO (MGI:3832108|PMID:18952909) RGD PMID:18952909 MGI:3832108 NCBI chr20:4,329,794...4,353,868
Ensembl chr20:4,329,811...4,353,785
JBrowse link
positive regulation of artery morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt3 AKT serine/threonine kinase 3 IEA
ISO
GO_REF:0000107
(MGI:6115146|PMID:28254819)
Ensembl
RGD
PMID:28254819 GO_REF:0000107, MGI:6115146 NCBI chr13:95,076,308...95,348,913
Ensembl chr13:95,081,390...95,348,913
JBrowse link
G Mdk midkine ISS
ISO
GO_REF:0000024
(MGI:6269002|PMID:29233575)
UniProt
RGD
PMID:29233575 GO_REF:0000024, MGI:6269002 NCBI chr 3:80,841,003...80,843,895
Ensembl chr 3:80,841,005...80,842,916
JBrowse link
G Rtn4 reticulon 4 ISS
ISO
GO_REF:0000024
(MGI:4366092|PMID:19805174)
UniProt
RGD
PMID:19805174 GO_REF:0000024, MGI:4366092 NCBI chr14:114,126,931...114,174,459
Ensembl chr14:114,126,943...114,174,458
JBrowse link
pulmonary artery endothelial tube morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:17992660)
Ensembl
UniProt
RGD
PMID:17992660 GO_REF:0000024, GO_REF:0000107 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
pulmonary artery morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 ISO MGI:2385355 (MGI:2384266|PMID:12149478) RGD PMID:12149478 MGI:2384266 NCBI chr 1:12,823,363...12,825,806
Ensembl chr 1:12,823,363...12,825,786
JBrowse link
G Hey2 hes-related family bHLH transcription factor with YRPW motif 2 ISO (MGI:2386835|PMID:12372254) RGD PMID:12372254 MGI:2386835 NCBI chr 1:29,191,170...29,201,257
Ensembl chr 1:29,191,192...29,201,531
JBrowse link
G Jag1 jagged canonical Notch ligand 1 ISO
IEA
(PMID:9207787)
GO_REF:0000107
RGD
Ensembl
PMID:9207787 GO_REF:0000107 NCBI chr 3:130,079,361...130,114,781
Ensembl chr 3:130,079,361...130,114,770
JBrowse link
G Lrp2 LDL receptor related protein 2 IEA
ISO
ISS
GO_REF:0000107
(MGI:5770180|PMID:26822476)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:26822476 GO_REF:0000024, GO_REF:0000107, MGI:5770180 NCBI chr 3:55,665,153...55,822,484
Ensembl chr 3:55,665,145...55,822,551
JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component ISO MGI:4440621 (MGI:4439427|PMID:20215345) RGD PMID:20215345 MGI:4439427 NCBI chr 2:230,286,886...230,356,887
Ensembl chr 2:230,287,296...230,356,919
JBrowse link
G Stra6 signaling receptor and transporter of retinol STRA6 ISO
IEA
(PMID:17273977)
GO_REF:0000107
RGD
Ensembl
PMID:17273977 GO_REF:0000107 NCBI chr 8:62,925,364...62,944,438
Ensembl chr 8:62,925,357...62,944,437
JBrowse link
renal artery morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nrp1 neuropilin 1 ISO (MGI:5490930|PMID:23639442) RGD PMID:23639442 MGI:5490930 NCBI chr19:61,332,351...61,486,166
Ensembl chr19:61,332,351...61,485,858
JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel ISO (PMID:11891195) RGD PMID:11891195 NCBI chr14:6,602,004...6,645,257
Ensembl chr14:6,602,004...6,645,257
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20030
    developmental process 6828
      anatomical structure development 6270
        blood vessel development 736
          artery development 111
            artery morphogenesis 77
              aorta morphogenesis + 36
              coronary artery morphogenesis 9
              ductus arteriosus closure + 6
              negative regulation of artery morphogenesis + 1
              pharyngeal arch artery morphogenesis 10
              positive regulation of artery morphogenesis + 7
              pulmonary artery morphogenesis + 7
              regulation of artery morphogenesis + 8
              renal artery morphogenesis 2
Path 2
Term Annotations click to browse term
  biological_process 20030
    developmental process 6828
      anatomical structure development 6270
        multicellular organism development 5744
          system development 5280
            circulatory system development 1225
              vasculature development 773
                blood vessel development 736
                  artery development 111
                    artery morphogenesis 77
                      aorta morphogenesis + 36
                      coronary artery morphogenesis 9
                      ductus arteriosus closure + 6
                      negative regulation of artery morphogenesis + 1
                      pharyngeal arch artery morphogenesis 10
                      positive regulation of artery morphogenesis + 7
                      pulmonary artery morphogenesis + 7
                      regulation of artery morphogenesis + 8
                      renal artery morphogenesis 2
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.