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ONTOLOGY REPORT - ANNOTATIONS


Term:formation of anatomical boundary
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Accession:GO:0048859 term browser browse the term
Definition:The process in which the limits of an anatomical structure are generated. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome.


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formation of anatomical boundary term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gdf3 growth differentiation factor 3 ISO MGI:3612535 (MGI:3611720|PMID:16368929) RGD PMID:16368929 MGI:3611720 NCBI chr 4:155,417,667...155,422,014
Ensembl chr 4:155,417,004...155,421,998
JBrowse link
G Nodal nodal growth differentiation factor ISO MGI:2158732 (MGI:2155575|PMID:11311163) RGD PMID:11311163 MGI:2155575 NCBI chr20:31,035,729...31,044,096
Ensembl chr20:31,035,729...31,044,096
JBrowse link
G Shh sonic hedgehog signaling molecule IEA
ISO
GO_REF:0000107
MGI:1857796 (MGI:1277744|PMID:9731532)
Ensembl
RGD
PMID:9731532 GO_REF:0000107, MGI:1277744 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
G Smad4 SMAD family member 4 IEA
ISO
GO_REF:0000107
MGI:1858049 (MGI:1195384|PMID:9420335)
Ensembl
RGD
PMID:9420335 GO_REF:0000107, MGI:1195384 NCBI chr18:69,626,682...69,657,373
Ensembl chr18:69,627,757...69,671,199
JBrowse link
sensory organ boundary specification term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ntf4 neurotrophin 4 ISS
ISO
PMID:10479455
MGI:1933845 (MGI:1345538|PMID:10479455)
RGD PMID:10479455, PMID:10479455 MGI:1345538, RGD:8554019 NCBI chr 1:101,405,314...101,408,145
Ensembl chr 1:101,405,314...101,408,145
JBrowse link
zona limitans intrathalamica formation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog signaling molecule IDA RGD PMID:25281935 RGD:12832757 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20020
    developmental process 6826
      anatomical structure formation involved in morphogenesis 1214
        formation of anatomical boundary 5
          equator specification 0
          establishment of central gap gene boundaries 0
          establishment of posterior gap gene boundaries 0
          establishment of terminal gap gene boundary 0
          formation of a compartment boundary 0
          formation of animal organ boundary + 1
          formation of plant organ boundary + 0
          hindbrain-spinal cord boundary formation 0
          rhombomere boundary formation 0
          zona limitans intrathalamica formation 1
Path 2
Term Annotations click to browse term
  biological_process 20020
    developmental process 6826
      anatomical structure development 6268
        anatomical structure morphogenesis 2879
          anatomical structure formation involved in morphogenesis 1214
            formation of anatomical boundary 5
              equator specification 0
              establishment of central gap gene boundaries 0
              establishment of posterior gap gene boundaries 0
              establishment of terminal gap gene boundary 0
              formation of a compartment boundary 0
              formation of animal organ boundary + 1
              formation of plant organ boundary + 0
              hindbrain-spinal cord boundary formation 0
              rhombomere boundary formation 0
              zona limitans intrathalamica formation 1
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.