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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of viral process
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Accession:GO:0050792 term browser browse the term
Definition:Any process that modulates the rate or extent of the viral life cycle, the set of processes by which a virus reproduces and spreads among hosts.
Synonyms:narrow_synonym: regulation of viral reproduction


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regulation of viral process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Chmp2a charged multivesicular body protein 2A JBrowse link 1 65,540,808 65,543,708 RGD:1624291
G Chmp3 charged multivesicular body protein 3 JBrowse link 4 99,449,213 99,496,156 RGD:1624291
G Chmp4b charged multivesicular body protein 4B JBrowse link 3 150,188,275 150,227,453 RGD:1624291
G Chmp4c charged multivesicular body protein 4C JBrowse link 2 93,574,554 93,641,497 RGD:1624291
G Cxcr4 C-X-C motif chemokine receptor 4 JBrowse link 13 45,314,952 45,318,856 RGD:11352687
G Vps4b vacuolar protein sorting 4 homolog B JBrowse link 13 26,825,261 26,850,460 RGD:1624291
intracellular transport of viral protein in host cell term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dynlt1 dynein light chain Tctex-type 1 JBrowse link 1 47,206,892 47,213,785 RGD:1624291
modulation by host of viral genome replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ifi27 interferon, alpha-inducible protein 27 JBrowse link 6 127,327,959 127,334,430 RGD:1624291
modulation by host of viral RNA genome replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fbxl2 F-box and leucine-rich repeat protein 2 JBrowse link 8 122,240,393 122,290,439 RGD:1624291
G Fmr1 FMRP translational regulator 1 JBrowse link X 154,684,924 154,722,369 RGD:1600115
RGD:1624291
G Phb prohibitin JBrowse link 10 83,476,107 83,488,878 RGD:1624291
G Vapb VAMP associated protein B and C JBrowse link 3 171,832,558 171,871,042 RGD:1624291
modulation by host of viral RNA-binding transcription factor activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nucks1 nuclear casein kinase and cyclin-dependent kinase substrate 1 JBrowse link 13 48,679,726 48,709,663 RGD:1624291
modulation by host of viral transcription term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Psmc3 proteasome 26S subunit, ATPase 3 JBrowse link 3 79,876,938 79,882,319 RGD:1600115
RGD:1624291
negative regulation by host of viral genome replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccl12 chemokine (C-C motif) ligand 12 JBrowse link 10 69,476,866 69,478,416 RGD:1600115
G Ccnk cyclin K JBrowse link 6 132,090,235 132,113,560 RGD:1624291
G Ceacam1 CEA cell adhesion molecule 1 JBrowse link 1 82,327,955 82,344,345 RGD:1624291
G Ddx3x DEAD-box helicase 3, X-linked JBrowse link X 10,400,363 10,414,010 RGD:1624291
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 JBrowse link 3 110,159,624 110,245,382 RGD:1624291
RGD:1600115
G Prkn parkin RBR E3 ubiquitin protein ligase JBrowse link 1 48,880,015 50,069,998 RGD:1624291
G Vapa VAMP associated protein A JBrowse link 9 113,300,831 113,331,872 RGD:1624291
G Vapb VAMP associated protein B and C JBrowse link 3 171,832,558 171,871,042 RGD:1624291
G Zc3h12a zinc finger CCCH type containing 12A JBrowse link 5 143,111,342 143,120,131 RGD:1624291
negative regulation by host of viral glycoprotein metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apcs amyloid P component, serum JBrowse link 13 91,426,621 91,427,417 RGD:1624291
RGD:1600115
G Ptx3 pentraxin 3 JBrowse link 2 158,097,843 158,103,653 RGD:1624291
negative regulation by host of viral process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apcs amyloid P component, serum JBrowse link 13 91,426,621 91,427,417 RGD:13792537
G Ceacam1 CEA cell adhesion molecule 1 JBrowse link 1 82,327,955 82,344,345 RGD:1624291
G Crp C-reactive protein JBrowse link 13 91,080,448 91,081,358 RGD:13792537
G Ltf lactotransferrin JBrowse link 8 119,290,416 119,313,261 RGD:1624291
G Mptx1 mucosal pentraxin 1 JBrowse link 13 91,772,927 91,827,231 RGD:13792537
G Ptx3 pentraxin 3 JBrowse link 2 158,097,843 158,103,653 RGD:13792537
negative regulation by host of viral release from host cell term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Vapb VAMP associated protein B and C JBrowse link 3 171,832,558 171,871,042 RGD:1624291
negative regulation by host of viral transcription term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccl3 C-C motif chemokine ligand 3 JBrowse link 10 70,869,516 70,871,066 RGD:1624291
RGD:1600115
G Ccl4 C-C motif chemokine ligand 4 JBrowse link 10 70,870,926 70,886,357 RGD:1624291
G Ccl5 C-C motif chemokine ligand 5 JBrowse link 10 70,739,764 70,744,303 RGD:1624291
RGD:1600115
G Hdac1 histone deacetylase 1 JBrowse link 5 147,716,664 147,743,723 RGD:1624291
G Hmga2 high mobility group AT-hook 2 JBrowse link 7 65,159,944 65,275,408 RGD:1624291
RGD:1600115
G Hmox1 heme oxygenase 1 JBrowse link 19 14,508,634 14,515,455 RGD:1624291
G Inpp5k inositol polyphosphate-5-phosphatase K JBrowse link 10 63,775,639 63,796,879 RGD:1624291
G Jun Jun proto-oncogene, AP-1 transcription factor subunit JBrowse link 5 114,011,184 114,014,277 RGD:1624291
G Pou2f3 POU class 2 homeobox 3 JBrowse link 8 47,412,063 47,495,042 RGD:1600115
RGD:1624291
G Rest RE1-silencing transcription factor JBrowse link 14 33,131,985 33,152,019 RGD:1600115
RGD:1624291
G Tardbp TAR DNA binding protein JBrowse link 5 165,432,089 165,442,232 RGD:1624291
G Tfap4 transcription factor AP-4 JBrowse link 10 11,204,616 11,222,975 RGD:1624291
G Zfp639 zinc finger protein 639 JBrowse link 2 118,906,479 118,917,491 RGD:1624291
RGD:1600115
negative regulation by virus of viral protein levels in host cell term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Stat1 signal transducer and activator of transcription 1 JBrowse link 9 54,287,540 54,327,958 RGD:1624291
G Vapb VAMP associated protein B and C JBrowse link 3 171,832,558 171,871,042 RGD:1624291
negative regulation of intracellular transport of viral material term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bst2 bone marrow stromal cell antigen 2 JBrowse link 16 19,938,781 19,942,353 RGD:1600115
RGD:1624291
G Mx2 MX dynamin like GTPase 2 JBrowse link 11 38,035,306 38,066,185 RGD:1624291
G Trim15 tripartite motif containing 15 JBrowse link 20 2,194,293 2,203,636 RGD:1624291
negative regulation of single stranded viral RNA replication via double stranded DNA intermediate term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aicda activation-induced cytidine deaminase JBrowse link 4 155,359,909 155,371,104 RGD:13792537
G Apobec3 apolipoprotein B mRNA editing enzyme catalytic subunit 3 JBrowse link 7 121,108,108 121,128,346 RGD:1624291
RGD:13792537
G Hmga2 high mobility group AT-hook 2 JBrowse link 7 65,159,944 65,275,408 RGD:1624291
RGD:1600115
G Inpp5k inositol polyphosphate-5-phosphatase K JBrowse link 10 63,775,639 63,796,879 RGD:1624291
G Morc2 MORC family CW-type zinc finger 2 JBrowse link 14 83,889,138 83,930,263 RGD:1624291
G Mphosph8 M-phase phosphoprotein 8 JBrowse link 15 36,918,843 36,946,712 RGD:1600115
RGD:1624291
G Resf1 retroelement silencing factor 1 JBrowse link 4 183,879,177 183,905,807 RGD:1624291
G Setdb1 SET domain bifurcated histone lysine methyltransferase 1 JBrowse link 2 196,495,867 196,527,412 RGD:1624291
G Tasor transcription activation suppressor JBrowse link 16 3,050,506 3,108,168 RGD:1624291
G Trim28 tripartite motif-containing 28 JBrowse link 1 65,544,369 65,551,043 RGD:1624291
negative regulation of transformation of host cell by virus term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fbln1 fibulin 1 JBrowse link 7 126,096,793 126,176,468 RGD:1624291
negative regulation of viral entry into host cell term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07015596.1 RGD:13792537
G AABR07021463.1 RGD:13792537
G Apcs amyloid P component, serum JBrowse link 13 91,426,621 91,427,417 RGD:1624291
RGD:1600115
G Fcna ficolin A JBrowse link 3 2,850,006 2,853,230 RGD:1624291
G Fcnb ficolin B JBrowse link 3 6,617,816 6,626,193 RGD:1624291
G Gsn gelsolin JBrowse link 3 14,456,106 14,508,922 RGD:1624291
G Ifitm1 interferon induced transmembrane protein 1 JBrowse link 1 213,765,825 213,767,841 RGD:1624291
RGD:13792537
G Ifitm2 interferon induced transmembrane protein 2 JBrowse link 1 213,750,219 213,751,399 RGD:1624291
RGD:13792537
G Ifitm3 interferon induced transmembrane protein 3 JBrowse link 1 213,810,712 213,811,821 RGD:1624291
RGD:13792537
G Ifitm6 interferon induced transmembrane protein 6 JBrowse link 1 213,816,966 213,856,570 RGD:13792537
G Mid2 midline 2 JBrowse link X 112,019,897 112,121,980 RGD:1624291
G Mre11 MRE11 homolog, double strand break repair nuclease JBrowse link 8 13,304,355 13,350,329 RGD:8693392
G Nbn nibrin JBrowse link 5 29,622,347 29,656,877 RGD:8693392
G Ptx3 pentraxin 3 JBrowse link 2 158,097,843 158,103,653 RGD:1624291
G Rad50 RAD50 double strand break repair protein JBrowse link 10 39,002,130 39,054,042 RGD:8693392
G RGD1561738 similar to interferon induced transmembrane protein 2 (1-8D) JBrowse link 13 73,661,005 73,661,699 RGD:13792537
G RGD1565332 similar to interferon induced transmembrane protein 3 JBrowse link 14 65,152,594 65,153,013 RGD:13792537
G Snx3 sorting nexin 3 JBrowse link 20 47,225,382 47,263,390 RGD:1624291
G Trim10 tripartite motif-containing 10 JBrowse link 20 2,182,945 2,191,640 RGD:1624291
G Trim11 tripartite motif-containing 11 JBrowse link 10 45,322,199 45,335,030 RGD:1624291
G Trim25 tripartite motif-containing 25 JBrowse link 10 76,343,847 76,362,159 RGD:1624291
G Trim26 tripartite motif-containing 26 JBrowse link 20 2,201,685 2,224,481 RGD:1600115
RGD:1624291
G Trim31 tripartite motif-containing 31 JBrowse link 20 2,146,245 2,159,875 RGD:1624291
G Trim5 tripartite motif-containing 5 JBrowse link 1 169,446,774 169,463,760 RGD:1624291
G Trim59 tripartite motif-containing 59 JBrowse link 2 165,629,903 165,641,751 RGD:1624291
G Trim8 tripartite motif-containing 8 JBrowse link 1 266,255,797 266,270,694 RGD:1624291
negative regulation of viral genome replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07015596.1 RGD:13792537
G AABR07021463.1 RGD:13792537
G Adar adenosine deaminase, RNA-specific JBrowse link 2 189,045,551 189,085,448 RGD:1624291
G Apobec3 apolipoprotein B mRNA editing enzyme catalytic subunit 3 JBrowse link 7 121,108,108 121,128,346 RGD:1624291
G Banf1 BAF nuclear assembly factor 1 JBrowse link 1 220,744,195 220,746,224 RGD:1624291
G Bst2 bone marrow stromal cell antigen 2 JBrowse link 16 19,938,781 19,942,353 RGD:1624291
RGD:1600115
G Ccl5 C-C motif chemokine ligand 5 JBrowse link 10 70,739,764 70,744,303 RGD:1624291
RGD:1600115
G Eif2ak2 eukaryotic translation initiation factor 2-alpha kinase 2 JBrowse link 6 1,428,845 1,466,193 RGD:1600115
RGD:1624291
G Fam111a family with sequence similarity 111, member A JBrowse link 1 229,003,778 229,019,532 RGD:1624291
G Ifitm1 interferon induced transmembrane protein 1 JBrowse link 1 213,765,825 213,767,841 RGD:13792537
G Ifitm2 interferon induced transmembrane protein 2 JBrowse link 1 213,750,219 213,751,399 RGD:1624291
RGD:13792537
G Ifitm3 interferon induced transmembrane protein 3 JBrowse link 1 213,810,712 213,811,821 RGD:1624291
RGD:13792537
G Ifitm6 interferon induced transmembrane protein 6 JBrowse link 1 213,816,966 213,856,570 RGD:13792537
G Ifnb1 interferon beta 1 JBrowse link 5 106,865,192 106,865,746 RGD:1624291
G Ilf3 interleukin enhancer binding factor 3 JBrowse link 8 22,402,877 22,440,984 RGD:1600115
RGD:1624291
G Isg15 ISG15 ubiquitin-like modifier JBrowse link 5 173,624,862 173,629,124 RGD:1624291
G Isg20 interferon stimulated exonuclease gene 20 JBrowse link 1 140,602,553 140,608,892 RGD:1624291
RGD:13792537
G LOC103689988 2'-5'-oligoadenylate synthase 1A-like JBrowse link 12 42,367,110 42,376,531 RGD:13792537
G Ltf lactotransferrin JBrowse link 8 119,290,416 119,313,261 RGD:1624291
G Mavs mitochondrial antiviral signaling protein JBrowse link 3 123,776,147 123,790,572 RGD:1624291
G Mx2 MX dynamin like GTPase 2 JBrowse link 11 38,035,306 38,066,185 RGD:1600115
RGD:1624291
G Oas1a 2'-5' oligoadenylate synthetase 1A JBrowse link 12 41,200,680 41,211,393 RGD:1624291
RGD:13792537
G Oas1b 2-5 oligoadenylate synthetase 1B JBrowse link 12 41,255,762 41,266,430 RGD:1600115
RGD:13792537
G Oas1e 2'-5' oligoadenylate synthetase 1E JBrowse link 12 41,281,479 41,290,500 RGD:13792537
G Oas1g 2'-5' oligoadenylate synthetase 1G JBrowse link 12 42,343,103 42,355,139 RGD:13792537
G Oas1h 2 ' -5 ' oligoadenylate synthetase 1H JBrowse link 12 41,214,587 41,224,254 RGD:13792537
G Oas1i 2 ' -5 ' oligoadenylate synthetase 1I JBrowse link 12 41,155,489 41,167,501 RGD:13792537
G Oas2 2'-5' oligoadenylate synthetase 2 JBrowse link 12 41,341,417 41,363,124 RGD:13792537
G Oas3 2'-5'-oligoadenylate synthetase 3 JBrowse link 12 41,313,081 41,368,217 RGD:1624291
RGD:13792537
RGD:1600115
G Oasl 2'-5'-oligoadenylate synthetase-like JBrowse link 12 47,444,138 47,456,680 RGD:1624291
RGD:13792537
G Oasl2 2'-5' oligoadenylate synthetase-like 2 JBrowse link 12 47,470,074 47,483,131 RGD:13792537
G Parp10 poly (ADP-ribose) polymerase family, member 10 JBrowse link 7 117,291,592 117,300,878 RGD:1624291
G Plscr1 phospholipid scramblase 1 JBrowse link 8 99,625,523 99,645,882 RGD:1600115
RGD:1624291
G Prox1 prospero homeobox 1 JBrowse link 13 108,382,536 108,444,107 RGD:1624291
G RGD1561738 similar to interferon induced transmembrane protein 2 (1-8D) JBrowse link 13 73,661,005 73,661,699 RGD:13792537
G RGD1565332 similar to interferon induced transmembrane protein 3 JBrowse link 14 65,152,594 65,153,013 RGD:13792537
G Rnasel ribonuclease L JBrowse link 13 71,188,712 71,202,636 RGD:1624291
RGD:13792537
G Rsad2 radical S-adenosyl methionine domain containing 2 JBrowse link 6 45,655,947 45,669,083 RGD:1600115
RGD:1624291
G Shfl shiftless antiviral inhibitor of ribosomal frameshifting JBrowse link 8 21,890,214 21,896,045 RGD:1600115
RGD:1624291
G Slpi secretory leukocyte peptidase inhibitor JBrowse link 3 160,799,979 160,802,228 RGD:1624291
G Srpk1 SRSF protein kinase 1 JBrowse link 20 5,829,412 5,865,877 RGD:1624291
G Srpk2 SRSF protein kinase 2 JBrowse link 4 7,994,025 8,187,455 RGD:1624291
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:1624291
G Trim6 tripartite motif containing 6 JBrowse link 1 169,410,084 169,423,305 RGD:1624291
G Zc3hav1 zinc finger CCCH-type containing, antiviral 1 JBrowse link 4 66,012,111 66,062,160 RGD:8554819
RGD:1624291
RGD:1600115
negative regulation of viral life cycle term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hmox1 heme oxygenase 1 JBrowse link 19 14,508,634 14,515,455 RGD:1624291
negative regulation of viral process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apcs amyloid P component, serum JBrowse link 13 91,426,621 91,427,417 RGD:1624291
G Apobec3 apolipoprotein B mRNA editing enzyme catalytic subunit 3 JBrowse link 7 121,108,108 121,128,346 RGD:1624291
G Crebbp CREB binding protein JBrowse link 10 11,590,994 11,721,039 RGD:1624291
G Ltf lactotransferrin JBrowse link 8 119,290,416 119,313,261 RGD:1624291
G Mbl2 mannose binding lectin 2 JBrowse link 1 248,435,069 248,442,669 RGD:1624291
negative regulation of viral release from host cell term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Chmp3 charged multivesicular body protein 3 JBrowse link 4 99,449,213 99,496,156 RGD:1624291
G Mid2 midline 2 JBrowse link X 112,019,897 112,121,980 RGD:1624291
G Pml PML nuclear body scaffold JBrowse link 8 63,002,515 63,034,310 RGD:1624291
G Trim11 tripartite motif-containing 11 JBrowse link 10 45,322,199 45,335,030 RGD:1624291
G Trim13 tripartite motif-containing 13 JBrowse link 15 41,897,191 41,936,545 RGD:1624291
G Trim15 tripartite motif containing 15 JBrowse link 20 2,194,293 2,203,636 RGD:1624291
G Trim21 tripartite motif-containing 21 JBrowse link 1 167,686,148 167,708,735 RGD:1624291
G Trim25 tripartite motif-containing 25 JBrowse link 10 76,343,847 76,362,159 RGD:1624291
G Trim26 tripartite motif-containing 26 JBrowse link 20 2,201,685 2,224,481 RGD:1600115
RGD:1624291
G Trim27 tripartite motif-containing 27 JBrowse link 17 45,613,863 45,626,212 RGD:1624291
G Trim28 tripartite motif-containing 28 JBrowse link 1 65,544,369 65,551,043 RGD:1624291
G Trim32 tripartite motif-containing 32 JBrowse link 5 81,431,554 81,449,023 RGD:1624291
G Trim35 tripartite motif-containing 35 JBrowse link 15 42,960,255 42,976,798 RGD:1600115
RGD:1624291
G Trim5 tripartite motif-containing 5 JBrowse link 1 169,446,774 169,463,760 RGD:1624291
G Trim8 tripartite motif-containing 8 JBrowse link 1 266,255,797 266,270,694 RGD:1624291
negative regulation of viral transcription term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ifitm3 interferon induced transmembrane protein 3 JBrowse link 1 213,810,712 213,811,821 RGD:1624291
G Mid2 midline 2 JBrowse link X 112,019,897 112,121,980 RGD:1624291
G Sp100 SP100 nuclear antigen JBrowse link 9 92,675,103 92,718,489 RGD:1624291
G Trim11 tripartite motif-containing 11 JBrowse link 10 45,322,199 45,335,030 RGD:1624291
G Trim13 tripartite motif-containing 13 JBrowse link 15 41,897,191 41,936,545 RGD:1624291
G Trim14 tripartite motif-containing 14 JBrowse link 5 62,128,941 62,154,424 RGD:1624291
G Trim21 tripartite motif-containing 21 JBrowse link 1 167,686,148 167,708,735 RGD:1624291
G Trim27 tripartite motif-containing 27 JBrowse link 17 45,613,863 45,626,212 RGD:1624291
RGD:13792537
G Trim31 tripartite motif-containing 31 JBrowse link 20 2,146,245 2,159,875 RGD:1624291
G Trim32 tripartite motif-containing 32 JBrowse link 5 81,431,554 81,449,023 RGD:1624291
G Trim62 tripartite motif-containing 62 JBrowse link 5 147,068,725 147,099,024 RGD:1624291
G Trim8 tripartite motif-containing 8 JBrowse link 1 266,255,797 266,270,694 RGD:1624291
G Ubp1 upstream binding protein 1 JBrowse link 8 122,196,576 122,241,368 RGD:1624291
G Zfp36 zinc finger protein 36 JBrowse link 1 85,380,088 85,382,565 RGD:1624291
RGD:1600115
positive regulation by host of viral genome replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hspa8 heat shock protein family A (Hsp70) member 8 JBrowse link 8 44,989,401 44,993,261 RGD:1624291
G Nucks1 nuclear casein kinase and cyclin-dependent kinase substrate 1 JBrowse link 13 48,679,726 48,709,663 RGD:1624291
G Ppib peptidylprolyl isomerase B JBrowse link 8 71,719,681 71,725,538 RGD:1624291
G Stom stomatin JBrowse link 3 14,515,576 14,538,199 RGD:1624291
G Tbc1d20 TBC1 domain family, member 20 JBrowse link 3 147,772,006 147,790,946 RGD:1624291
G Vapa VAMP associated protein A JBrowse link 9 113,300,831 113,331,872 RGD:1624291
G Vapb VAMP associated protein B and C JBrowse link 3 171,832,558 171,871,042 RGD:1624291
G Ythdc2 YTH domain containing 2 JBrowse link 1 182,072,386 182,141,399 RGD:1624291
positive regulation by host of viral process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Anxa2 annexin A2 JBrowse link 8 75,687,134 75,723,589 RGD:1624291
G Apoe apolipoprotein E JBrowse link 1 80,612,894 80,616,820 RGD:1624291
RGD:1600115
G Cav2 caveolin 2 JBrowse link 4 44,573,264 44,580,640 RGD:1624291
G Ceacam1 CEA cell adhesion molecule 1 JBrowse link 1 82,327,955 82,344,345 RGD:1624291
G Cfl1 cofilin 1 JBrowse link 1 220,869,805 220,873,337 RGD:1624291
G Csf1r colony stimulating factor 1 receptor JBrowse link 18 56,414,493 56,458,300 RGD:1600115
RGD:1624291
G Ifng interferon gamma JBrowse link 7 61,337,383 61,341,419 RGD:1624291
G Igf2r insulin-like growth factor 2 receptor JBrowse link 1 48,176,095 48,264,482 RGD:1624291
G LOC100911237 zinc finger protein 420-like JBrowse link 1 31,494,043 31,519,034 RGD:1624291
G Pc pyruvate carboxylase JBrowse link 1 219,759,157 219,859,854 RGD:1624291
G Ppib peptidylprolyl isomerase B JBrowse link 8 71,719,681 71,725,538 RGD:1624291
positive regulation by host of viral release from host cell term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cav2 caveolin 2 JBrowse link 4 44,573,264 44,580,640 RGD:1624291
RGD:1600115
G LOC100911237 zinc finger protein 420-like JBrowse link 1 31,494,043 31,519,034 RGD:1624291
G Pc pyruvate carboxylase JBrowse link 1 219,759,157 219,859,854 RGD:1624291
RGD:1600115
G Vapa VAMP associated protein A JBrowse link 9 113,300,831 113,331,872 RGD:1624291
G Vapb VAMP associated protein B and C JBrowse link 3 171,832,558 171,871,042 RGD:1624291
positive regulation by host of viral transcription term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Chd1 chromodomain helicase DNA binding protein 1 JBrowse link 1 57,692,828 57,756,762 RGD:1624291
G Ctdp1 CTD phosphatase subunit 1 JBrowse link 18 76,922,913 76,985,095 RGD:1624291
G Ep300 E1A binding protein p300 JBrowse link 7 122,818,194 122,889,055 RGD:1624291
G Fkbp8 FKBP prolyl isomerase 8 JBrowse link 16 20,645,956 20,652,890 RGD:1624291
G Gtf2b general transcription factor IIB JBrowse link 2 248,709,433 248,727,741 RGD:1600115
RGD:1624291
G Hpn hepsin JBrowse link 1 89,534,112 89,549,575 RGD:1600115
RGD:1624291
G Jun Jun proto-oncogene, AP-1 transcription factor subunit JBrowse link 5 114,011,184 114,014,277 RGD:1624291
G Lef1 lymphoid enhancer binding factor 1 JBrowse link 2 236,232,115 236,345,061 RGD:1600115
RGD:1624291
G Nucks1 nuclear casein kinase and cyclin-dependent kinase substrate 1 JBrowse link 13 48,679,726 48,709,663 RGD:1624291
G Rrp1b ribosomal RNA processing 1B JBrowse link 20 10,844,234 10,869,830 RGD:1624291
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 JBrowse link 8 22,648,323 22,739,468 RGD:1624291
RGD:1600115
G Smarcb1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 JBrowse link 20 13,679,955 13,702,821 RGD:1624291
G Snw1 SNW domain containing 1 JBrowse link 6 111,483,698 111,507,782 RGD:1624291
G Sp1 Sp1 transcription factor JBrowse link 7 144,014,173 144,044,635 RGD:1624291
G Taf11 TATA-box binding protein associated factor 11 JBrowse link 20 7,476,648 7,484,417 RGD:1624291
G Tfap4 transcription factor AP-4 JBrowse link 10 11,204,616 11,222,975 RGD:1624291
G Zfp639 zinc finger protein 639 JBrowse link 2 118,906,479 118,917,491 RGD:1624291
RGD:1600115
positive regulation by virus of viral protein levels in host cell term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ddb1 damage-specific DNA binding protein 1 JBrowse link 1 226,657,561 226,683,356 RGD:1624291
RGD:1600115
G Hacd3 3-hydroxyacyl-CoA dehydratase 3 JBrowse link 8 70,471,572 70,509,874 RGD:1624291
G Stau1 staufen double-stranded RNA binding protein 1 JBrowse link 3 163,703,204 163,748,996 RGD:1624291
G Tbc1d20 TBC1 domain family, member 20 JBrowse link 3 147,772,006 147,790,946 RGD:1624291
positive regulation of intracellular transport of viral material term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fmr1 FMRP translational regulator 1 JBrowse link X 154,684,924 154,722,369 RGD:1600115
RGD:1624291
positive regulation of single stranded viral RNA replication via double stranded DNA intermediate term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Top2a DNA topoisomerase II alpha JBrowse link 10 86,901,467 86,930,947 RGD:1600115
RGD:1624291
G Top2b DNA topoisomerase II beta JBrowse link 15 10,262,972 10,319,741 RGD:1624291
positive regulation of viral budding via host ESCRT complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tsg101 tumor susceptibility 101 JBrowse link 1 102,941,151 102,971,017 RGD:1624291
G Vps37b VPS37B subunit of ESCRT-I JBrowse link 12 37,984,790 38,023,369 RGD:1624291
G Vps4a vacuolar protein sorting 4 homolog A JBrowse link 19 39,230,050 39,243,298 RGD:1624291
positive regulation of viral entry into host cell term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bsg basigin (Ok blood group) JBrowse link 7 12,875,536 12,882,753 RGD:1624291
G Cd4 Cd4 molecule JBrowse link 4 157,381,862 157,408,357 RGD:1624291
G Cd74 CD74 molecule JBrowse link 18 56,071,420 56,080,851 RGD:1624291
G Lgals1 galectin 1 JBrowse link 7 120,153,184 120,156,290 RGD:1624291
G Lgals9 galectin 9 JBrowse link 10 64,737,022 64,760,195 RGD:1624291
G Nectin1 nectin cell adhesion molecule 1 JBrowse link 8 48,094,233 48,198,499 RGD:1624291
G P4hb prolyl 4-hydroxylase subunit beta JBrowse link 10 109,736,459 109,748,070 RGD:1624291
G RT1-Db1 RT1 class II, locus Db1 JBrowse link 20 4,087,621 4,097,190 RGD:1624291
G Tmprss2 transmembrane serine protease 2 JBrowse link 11 38,063,914 38,103,406 RGD:1624291
G Trim11 tripartite motif-containing 11 JBrowse link 10 45,322,199 45,335,030 RGD:1624291
G Trim21 tripartite motif-containing 21 JBrowse link 1 167,686,148 167,708,735 RGD:1624291
G Trim38 tripartite motif containing 38 JBrowse link 17 43,600,006 43,607,879 RGD:1624291
positive regulation of viral genome replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adar adenosine deaminase, RNA-specific JBrowse link 2 189,045,551 189,085,448 RGD:1600115
RGD:1624291
G Adarb1 adenosine deaminase, RNA-specific, B1 JBrowse link 20 11,972,352 12,101,022 RGD:1600115
RGD:1624291
G Cnot7 CCR4-NOT transcription complex, subunit 7 JBrowse link 16 54,899,452 54,918,616 RGD:1624291
G Ddb1 damage-specific DNA binding protein 1 JBrowse link 1 226,657,561 226,683,356 RGD:1624291
RGD:1600115
G Ddx3x DEAD-box helicase 3, X-linked JBrowse link X 10,400,363 10,414,010 RGD:1624291
G Fkbp6 FKBP prolyl isomerase 6 JBrowse link 12 24,365,941 24,438,088 RGD:1624291
G Hacd3 3-hydroxyacyl-CoA dehydratase 3 JBrowse link 8 70,471,572 70,509,874 RGD:1624291
G Larp1 La ribonucleoprotein 1, translational regulator JBrowse link 10 43,435,738 43,501,186 RGD:1624291
G Notch1 notch receptor 1 JBrowse link 3 3,905,562 3,951,015 RGD:1624291
G Nr5a2 nuclear receptor subfamily 5, group A, member 2 JBrowse link 13 53,750,470 53,870,288 RGD:1624291
G Pabpc1 poly(A) binding protein, cytoplasmic 1 JBrowse link 7 75,409,581 75,421,874 RGD:1624291
G Pde12 phosphodiesterase 12 JBrowse link 16 2,357,028 2,367,069 RGD:1600115
RGD:1624291
G Pkn2 protein kinase N2 JBrowse link 2 248,735,699 248,840,735 RGD:1624291
RGD:1600115
G Ppia peptidylprolyl isomerase A JBrowse link 14 86,673,775 86,677,443 RGD:1624291
G Ppid peptidylprolyl isomerase D JBrowse link 2 178,354,830 178,366,843 RGD:1624291
G Ppie peptidylprolyl isomerase E JBrowse link 5 140,822,141 140,835,244 RGD:1624291
G Ppih peptidylprolyl isomerase H JBrowse link 5 138,343,934 138,361,743 RGD:1624291
G Rad23a RAD23 homolog A, nucleotide excision repair protein JBrowse link 19 25,949,488 25,956,677 RGD:1624291
G Srpk1 SRSF protein kinase 1 JBrowse link 20 5,829,412 5,865,877 RGD:1624291
G Srpk2 SRSF protein kinase 2 JBrowse link 4 7,994,025 8,187,455 RGD:1624291
G Stau1 staufen double-stranded RNA binding protein 1 JBrowse link 3 163,703,204 163,748,996 RGD:1624291
G Tarbp2 TARBP2 subunit of RISC loading complex JBrowse link 7 144,121,688 144,126,860 RGD:1624291
RGD:1600115
G Tmem39a transmembrane protein 39a JBrowse link 11 64,723,181 64,752,514 RGD:1624291
G Trim38 tripartite motif containing 38 JBrowse link 17 43,600,006 43,607,879 RGD:1624291
G Vapb VAMP associated protein B and C JBrowse link 3 171,832,558 171,871,042 RGD:1624291
RGD:1600115
positive regulation of viral life cycle term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Anxa2 annexin A2 JBrowse link 8 75,687,134 75,723,589 RGD:1624291
G Kpna2 karyopherin subunit alpha 2 JBrowse link 10 95,200,029 95,212,111 RGD:1624291
G Kpna6 karyopherin subunit alpha 6 JBrowse link 5 147,852,738 147,867,600 RGD:1624291
G Vps4a vacuolar protein sorting 4 homolog A JBrowse link 19 39,230,050 39,243,298 RGD:1624291
G Vps4b vacuolar protein sorting 4 homolog B JBrowse link 13 26,825,261 26,850,460 RGD:1624291
positive regulation of viral process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rab7a RAB7A, member RAS oncogene family JBrowse link 4 119,910,461 119,963,065 RGD:1624291
G Stom stomatin JBrowse link 3 14,515,576 14,538,199 RGD:1624291
G Tmem250 transmembrane protein 250 JBrowse link 3 3,590,783 3,594,475 RGD:1624291
G Vps4a vacuolar protein sorting 4 homolog A JBrowse link 19 39,230,050 39,243,298 RGD:1600115
RGD:1624291
G Vps4b vacuolar protein sorting 4 homolog B JBrowse link 13 26,825,261 26,850,460 RGD:1624291
positive regulation of viral release from host cell term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Chmp2a charged multivesicular body protein 2A JBrowse link 1 65,540,808 65,543,708 RGD:1624291
G Chmp2b charged multivesicular body protein 2B JBrowse link 11 2,666,405 2,692,213 RGD:1624291
G Chmp3 charged multivesicular body protein 3 JBrowse link 4 99,449,213 99,496,156 RGD:1624291
G Chmp4b charged multivesicular body protein 4B JBrowse link 3 150,188,275 150,227,453 RGD:1624291
G Chmp4c charged multivesicular body protein 4C JBrowse link 2 93,574,554 93,641,497 RGD:1600115
RGD:1624291
G Ddb1 damage-specific DNA binding protein 1 JBrowse link 1 226,657,561 226,683,356 RGD:1624291
RGD:1600115
G Tsg101 tumor susceptibility 101 JBrowse link 1 102,941,151 102,971,017 RGD:1624291
G Vps37b VPS37B subunit of ESCRT-I JBrowse link 12 37,984,790 38,023,369 RGD:1624291
G Vps4a vacuolar protein sorting 4 homolog A JBrowse link 19 39,230,050 39,243,298 RGD:1624291
G Vps4b vacuolar protein sorting 4 homolog B JBrowse link 13 26,825,261 26,850,460 RGD:1624291
positive regulation of viral transcription term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dhx9 DExH-box helicase 9 JBrowse link 13 70,885,503 70,922,278 RGD:1624291
G Gtf2b general transcription factor IIB JBrowse link 2 248,709,433 248,727,741 RGD:1624291
G Map3k1 mitogen-activated protein kinase kinase kinase 1 JBrowse link 2 43,329,516 43,393,203 RGD:2293493
G Mdfic MyoD family inhibitor domain containing JBrowse link 4 42,202,546 42,282,499 RGD:1624291
RGD:13792537
G Notch1 notch receptor 1 JBrowse link 3 3,905,562 3,951,015 RGD:1624291
G Pfn1 profilin 1 JBrowse link 10 57,273,003 57,275,708 RGD:2324854
G Rsf1 remodeling and spacing factor 1 JBrowse link 1 162,549,222 162,671,962 RGD:1624291
positive regulation of viral translation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dhx9 DExH-box helicase 9 JBrowse link 13 70,885,503 70,922,278 RGD:1624291
regulation of viral budding via host ESCRT complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Snf8 SNF8 subunit of ESCRT-II JBrowse link 10 83,856,331 83,868,621 RGD:1624291
regulation of viral entry into host cell term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hs3st5 heparan sulfate-glucosamine 3-sulfotransferase 5 JBrowse link 20 40,236,437 40,545,502 RGD:1624291
G Nectin2 nectin cell adhesion molecule 2 JBrowse link 1 80,631,449 80,666,617 RGD:1624291
RGD:13792537
G Trim14 tripartite motif-containing 14 JBrowse link 5 62,128,941 62,154,424 RGD:13792537
G Trim21 tripartite motif-containing 21 JBrowse link 1 167,686,148 167,708,735 RGD:13792537
G Trim25 tripartite motif-containing 25 JBrowse link 10 76,343,847 76,362,159 RGD:1624291
G Trim27 tripartite motif-containing 27 JBrowse link 17 45,613,863 45,626,212 RGD:13792537
G Trim30c tripartite motif-containing 30C JBrowse link 1 169,492,786 169,514,195 RGD:13792537
G Trim34 tripartite motif-containing 34 JBrowse link 1 169,433,539 169,445,041 RGD:13792537
G Trim5 tripartite motif-containing 5 JBrowse link 1 169,446,774 169,463,760 RGD:13792537
G Trim6 tripartite motif containing 6 JBrowse link 1 169,410,084 169,423,305 RGD:13792537
G Trim62 tripartite motif-containing 62 JBrowse link 5 147,068,725 147,099,024 RGD:1624291
G Trim68 tripartite motif containing 68 JBrowse link 1 167,835,773 167,849,880 RGD:13792537
G Triml1 tripartite motif family-like 1 JBrowse link 16 52,169,426 52,177,548 RGD:13792537
G Triml2 tripartite motif family-like 2 JBrowse link 16 52,116,975 52,127,591 RGD:13792537
regulation of viral genome replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bcl2 BCL2, apoptosis regulator JBrowse link 13 26,605,426 26,769,374 RGD:1600115
RGD:1624291
G Ddx5 DEAD-box helicase 5 JBrowse link 10 94,979,759 94,988,461 RGD:5128521
G Dicer1 dicer 1 ribonuclease III JBrowse link 6 128,388,084 128,453,234 RGD:1624291
G Mir24-2 microRNA 24-2 JBrowse link 19 25,318,863 25,318,970 RGD:1624291
G Mir93 microRNA 93 JBrowse link 12 19,307,543 19,307,629 RGD:1624291
G Ppia peptidylprolyl isomerase A JBrowse link 14 86,673,775 86,677,443 RGD:1624291
RGD:1600115
G Ppial4d peptidylprolyl isomerase A (cyclophilin A)-like 4D JBrowse link 14 22,706,906 22,707,648 RGD:1600115
regulation of viral life cycle term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apobec3 apolipoprotein B mRNA editing enzyme catalytic subunit 3 JBrowse link 7 121,108,108 121,128,346 RGD:1624291
G Lamp3 lysosomal-associated membrane protein 3 JBrowse link 11 84,930,965 85,000,694 RGD:1624291
regulation of viral release from host cell term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Trim25 tripartite motif-containing 25 JBrowse link 10 76,343,847 76,362,159 RGD:1624291
G Trim31 tripartite motif-containing 31 JBrowse link 20 2,146,245 2,159,875 RGD:1624291
G Trim62 tripartite motif-containing 62 JBrowse link 5 147,068,725 147,099,024 RGD:1624291
G Tsg101 tumor susceptibility 101 JBrowse link 1 102,941,151 102,971,017 RGD:1624291
regulation of viral transcription term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tarbp2 TARBP2 subunit of RISC loading complex JBrowse link 7 144,121,688 144,126,860 RGD:1624291
RGD:1600115

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19858
    regulation of biological process 12959
      regulation of symbiotic process 225
        regulation of viral process 208
          latency-replication decision 0
          negative regulation of viral process + 112
          positive regulation of viral process + 90
          regulation by virus of viral protein levels in host cell + 7
          regulation of transformation of host cell by virus + 1
          regulation of viral life cycle + 162
          regulation of viral transcription + 49
          regulation of viral translation + 1
Path 2
Term Annotations click to browse term
  biological_process 19858
    interspecies interaction between organisms 1887
      symbiotic process 395
        viral process 329
          regulation of viral process 208
            latency-replication decision 0
            negative regulation of viral process + 112
            positive regulation of viral process + 90
            regulation by virus of viral protein levels in host cell + 7
            regulation of transformation of host cell by virus + 1
            regulation of viral life cycle + 162
            regulation of viral transcription + 49
            regulation of viral translation + 1
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.