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ONTOLOGY REPORT - ANNOTATIONS


Term:defense response to Gram-positive bacterium
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Accession:GO:0050830 term browser browse the term
Definition:Reactions triggered in response to the presence of a Gram-positive bacterium that act to protect the cell or organism.
Synonyms:exact_synonym: defence response to Gram-positive bacteria;   defence response to Gram-positive bacterium;   defense response to Gram-positive bacteria
 related_synonym: Gram-positive antibacterial peptide activity


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defense response to Gram-positive bacterium term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acp5 acid phosphatase 5, tartrate resistant JBrowse link 8 23,142,733 23,149,067 RGD:1624291
RGD:1600115
G Adam17 ADAM metallopeptidase domain 17 JBrowse link 6 43,400,525 43,448,280 RGD:1624291
RGD:1600115
G Adm adrenomedullin JBrowse link 1 175,443,189 175,447,260 RGD:1624291
G Ang angiogenin JBrowse link 15 28,022,926 28,028,636 RGD:1624291
G App amyloid beta precursor protein JBrowse link 11 24,425,013 24,641,872 RGD:10400853
RGD:1624291
G B2m beta-2 microglobulin JBrowse link 3 114,087,287 114,093,311 RGD:1624291
G C5ar1 complement C5a receptor 1 JBrowse link 1 78,186,777 78,195,132 RGD:1624291
G Camp cathelicidin antimicrobial peptide JBrowse link 8 117,930,557 117,932,371 RGD:2316243
RGD:1624291
RGD:13792537
G Card9 caspase recruitment domain family, member 9 JBrowse link 3 3,798,346 3,806,841 RGD:1624291
RGD:1600115
G Cd36 CD36 molecule JBrowse link 4 14,150,309 14,191,498 RGD:1624291
G Chga chromogranin A JBrowse link 6 126,434,226 126,445,569 RGD:1600115
RGD:1624291
G Ctsg cathepsin G JBrowse link 15 35,107,333 35,113,678 RGD:1624291
G Defa10 defensin alpha 10 JBrowse link 16 75,498,236 75,499,012 RGD:1624291
G Defa11 defensin alpha 11 JBrowse link 16 75,517,421 75,519,605 RGD:13792537
G Defa24 defensin alpha 24 JBrowse link 16 75,345,086 75,346,122 RGD:13792537
G Defa5 defensin alpha 5 JBrowse link 16 75,338,050 75,340,401 RGD:1624291
RGD:13792537
G Defa6 defensin alpha 6 JBrowse link 16 75,400,781 75,401,655 RGD:1624291
RGD:13792537
G Defa8 defensin alpha 8 JBrowse link 16 75,428,675 75,429,568 RGD:13792537
G Defa9 defensin alpha 9 JBrowse link 16 75,465,710 75,466,604 RGD:13792537
G Defal1 defensin alpha-like 1 JBrowse link 16 75,366,925 75,367,985 RGD:13792537
G Defb1 defensin beta 1 JBrowse link 16 75,294,385 75,309,127 RGD:1600115
RGD:1624291
G Defb13 defensin beta 13 JBrowse link 16 75,027,131 75,028,977 RGD:1624291
G Defb14 defensin beta 14 JBrowse link 16 75,647,523 75,650,913 RGD:1624291
G Defb15 defensin beta 15 JBrowse link 16 75,105,290 75,107,931 RGD:1624291
G Defb20 defensin beta 20 JBrowse link 3 147,952,879 147,955,502 RGD:1624291
G Defb24 defensin beta 24 JBrowse link 3 148,051,364 148,057,497 RGD:1600115
RGD:1624291
G Defb4 defensin beta 4 JBrowse link 16 75,634,598 75,637,789 RGD:1624291
RGD:1600115
G Defb5 defensin beta 5 JBrowse link 16 75,597,323 75,599,483 RGD:1624291
G Dmbt1 deleted in malignant brain tumors 1 JBrowse link 1
1
201,620,642
203,149,414
201,689,905
203,228,705
RGD:1624291
RGD:1600115
G Drosha drosha ribonuclease III JBrowse link 2 62,887,267 63,000,307 RGD:1624291
RGD:1600115
G Epha2 Eph receptor A2 JBrowse link 5 159,845,773 159,874,203 RGD:1624291
RGD:1600115
G Fau FAU, ubiquitin like and ribosomal protein S30 fusion JBrowse link 1 221,420,312 221,421,827 RGD:1624291
G Fgr FGR proto-oncogene, Src family tyrosine kinase JBrowse link 5 151,172,189 151,199,746 RGD:1624291
RGD:1600115
G Gbp1 guanylate binding protein 1 JBrowse link 2 248,343,334 248,423,402 RGD:1624291
G Gbp2 guanylate binding protein 2 JBrowse link 2 248,276,795 248,293,784 RGD:1624291
RGD:13792537
RGD:1600115
G Gbp4 guanylate binding protein 4 JBrowse link 2 248,249,232 248,263,104 RGD:1624291
RGD:13792537
G Gbp6 guanylate binding protein family member 6 JBrowse link 14 5,927,568 5,954,923 RGD:13792537
G Gsdmd gasdermin D JBrowse link 7 116,889,147 116,894,134 RGD:1624291
RGD:1600115
G Hamp hepcidin antimicrobial peptide JBrowse link 1 89,368,021 89,369,960 RGD:1624291
G Havcr2 hepatitis A virus cellular receptor 2 JBrowse link 10 31,561,838 31,590,624 RGD:1624291
RGD:1600115
G Hck HCK proto-oncogene, Src family tyrosine kinase JBrowse link 3 148,579,917 148,623,026 RGD:1624291
G Hist1h2bd histone cluster 1 H2B family member D JBrowse link 17 44,833,924 44,834,305 RGD:1624291
G Hist1h2bk histone cluster 1 H2B family member k JBrowse link 17 44,527,421 44,527,801 RGD:1624291
G Hist1h2bl histone cluster 1 H2B family member l JBrowse link 17 44,748,445 44,748,910 RGD:1624291
G Hist1h2bq histone cluster 1 H2B family member Q JBrowse link 17 43,679,925 43,689,311 RGD:1624291
G Hist2h2be histone cluster 2 H2B family member E JBrowse link 2 198,360,837 198,363,399 RGD:1624291
G Hmgb2 high mobility group box 2 JBrowse link 16 36,077,615 36,080,191 RGD:1624291
RGD:1600115
G Hmgb2l1 high mobility group box 2-like 1 JBrowse link 11 49,708,038 49,709,128 RGD:1600115
G Il12a interleukin 12A JBrowse link 2 165,076,945 165,083,996 RGD:1624291
RGD:1600115
G Il27ra interleukin 27 receptor subunit alpha JBrowse link 19 25,151,835 25,163,995 RGD:1624291
RGD:1600115
G Kb15 type II keratin Kb15 JBrowse link 7 143,208,034 143,217,771 RGD:1624291
G Klrk1 killer cell lectin like receptor K1 JBrowse link 4 163,392,652 163,403,735 RGD:1624291
RGD:1600115
G Lalba lactalbumin, alpha JBrowse link 7 140,088,420 140,096,347 RGD:13792537
G Lbp lipopolysaccharide binding protein JBrowse link 3 154,786,232 154,812,910 RGD:1624291
RGD:13792537
RGD:1600115
G Lce3e late cornified envelope 3E JBrowse link 2 193,275,472 193,276,006 RGD:1624291
G LOC100364500 RT1 class I, locus CE11-like JBrowse link 20 2,704,153 2,707,111 RGD:1624291
G LOC100910070 lysozyme g-like protein 1-like JBrowse link 9 44,605,306 44,611,810 RGD:13792537
G LOC103690086 uncharacterized LOC103690086 JBrowse link 14 5,642,357 5,646,406 RGD:1624291
G LOC103693222 lysozyme g-like protein 2 JBrowse link 9 44,574,626 44,590,028 RGD:13792537
G LOC103694852 ribonuclease K6-like RGD:1624291
G LOC290595 hypothetical gene supported by AF152002 JBrowse link 16 14,352,998 14,360,604 RGD:1624291
G Lta lymphotoxin alpha JBrowse link 20 4,851,889 4,854,677 RGD:1624291
RGD:1600115
G Ltf lactotransferrin JBrowse link 8 119,290,416 119,313,261 RGD:1624291
G Lyc2 lysozyme C type 2 JBrowse link 7 60,316,045 60,323,610 RGD:13792537
G Lyg1 lysozyme G1 JBrowse link 9 44,527,596 44,539,320 RGD:13792537
G Lyg2 lysozyme G2 JBrowse link 9 44,497,508 44,509,921 RGD:1624291
RGD:13792537
G Lyz2 lysozyme 2 JBrowse link 7 60,335,968 60,341,264 RGD:1599862
RGD:13792537
RGD:1624291
G Lyzl1 lysozyme-like 1 JBrowse link 17 56,255,613 56,269,245 RGD:13792537
G Lyzl4 lysozyme-like 4 JBrowse link 8 130,219,984 130,228,066 RGD:13792537
G Lyzl6 lysozyme-like 6 JBrowse link 10 91,694,547 91,701,428 RGD:13792537
G Mbl1 mannose-binding lectin (protein A) 1 JBrowse link 16 18,736,154 18,742,193 RGD:1624291
RGD:1600115
G Mbl2 mannose binding lectin 2 JBrowse link 1 248,435,069 248,442,669 RGD:1624291
G Mmp7 matrix metallopeptidase 7 JBrowse link 8 5,893,253 5,900,965 RGD:1624291
G Mpeg1 macrophage expressed 1 JBrowse link 1 228,724,559 228,729,054 RGD:1600115
RGD:1624291
G Mpo myeloperoxidase JBrowse link 10 75,087,892 75,098,260 RGD:1624291
G Myd88 MYD88, innate immune signal transduction adaptor JBrowse link 8 128,022,512 128,027,462 RGD:1600115
RGD:13792537
RGD:1624291
G Myo1f myosin IF JBrowse link 7 18,440,742 18,491,448 RGD:1624291
G Ncf1 neutrophil cytosolic factor 1 JBrowse link 12 25,497,104 25,506,300 RGD:1624291
G Nlrp3 NLR family, pyrin domain containing 3 JBrowse link 10 45,884,324 45,918,290 RGD:1624291
RGD:1600115
G Nod1 nucleotide-binding oligomerization domain containing 1 JBrowse link 4 85,123,965 85,175,206 RGD:1624291
RGD:1600115
G Nod2 nucleotide-binding oligomerization domain containing 2 JBrowse link 19 19,342,061 19,389,366 RGD:1624291
G Np4 defensin NP-4 precursor JBrowse link 16 75,478,548 75,481,146 RGD:1624291
RGD:13792537
G Npy neuropeptide Y JBrowse link 4 79,557,856 79,565,059 RGD:1624291
G P2rx7 purinergic receptor P2X 7 JBrowse link 12 39,353,613 39,396,042 RGD:1624291
G Pglyrp1 peptidoglycan recognition protein 1 JBrowse link 1 79,790,879 79,796,064 RGD:1600115
RGD:13792537
RGD:1624291
G Pglyrp2 peptidoglycan recognition protein 2 JBrowse link 7 14,426,481 14,435,987 RGD:1624291
RGD:13792537
G Pglyrp3 peptidoglycan recognition protein 3 JBrowse link 2 191,903,626 192,264,872 RGD:1624291
RGD:13792537
G Pglyrp3b peptidoglycan recognition protein 3b JBrowse link 2 191,900,147 191,916,863 RGD:13792537
G Pglyrp4 peptidoglycan recognition protein 4 JBrowse link 2 190,125,655 190,204,230 RGD:1624291
RGD:13792537
G Pla2g1b phospholipase A2 group IB JBrowse link 12 46,879,346 46,890,234 RGD:1624291
RGD:1600115
G Pld1 phospholipase D1 JBrowse link 2 113,651,967 113,849,403 RGD:1624291
G Ppp1r11 protein phosphatase 1, regulatory (inhibitor) subunit 11 JBrowse link 20 2,094,931 2,098,438 RGD:1624291
RGD:1600115
G Rarres2 retinoic acid receptor responder 2 JBrowse link 4 78,205,809 78,208,956 RGD:1624291
RGD:1600115
G RatNP-3b defensin RatNP-3 precursor JBrowse link 16 75,528,348 75,530,511 RGD:13792537
G Reg3b regenerating family member 3 beta JBrowse link 4 109,467,272 109,470,510 RGD:1600115
RGD:1624291
G Reg3g regenerating family member 3 gamma JBrowse link 4 109,529,679 109,532,234 RGD:1600115
RGD:1624291
G RGD1306474 similar to RIKEN cDNA 9530003J23 JBrowse link 7 60,305,006 60,309,878 RGD:13792537
G RGD1559962 similar to High mobility group protein 2 (HMG-2) JBrowse link 1 20,416,735 20,417,959 RGD:1600115
G Ripk2 receptor-interacting serine-threonine kinase 2 JBrowse link 5 29,838,713 29,870,390 RGD:1624291
RGD:1600115
G Rnase2 ribonuclease A family member 2 JBrowse link 15 28,154,482 28,155,291 RGD:1624291
G Rnase3 ribonuclease A family member 3 JBrowse link 15 28,216,744 28,217,614 RGD:1624291
G Rnase6 ribonuclease A family member k6 JBrowse link 15 28,080,307 28,084,269 RGD:1624291
G Romo1 reactive oxygen species modulator 1 JBrowse link 3 151,688,213 151,689,813 RGD:1624291
G Rpl39 ribosomal protein L39 JBrowse link X 123,705,241 123,707,257 RGD:1624291
G RT1-S3 RT1 class Ib, locus S3 JBrowse link 20 3,176,124 3,180,825 RGD:1624291
G Scd stearoyl-CoA desaturase JBrowse link 1 264,159,966 264,173,061 RGD:1624291
RGD:1600115
G Seh1l SEH1-like nucleoporin JBrowse link 18 63,545,150 63,568,101 RGD:1624291
G Spaca3 sperm acrosome associated 3 JBrowse link 10 68,227,736 68,235,295 RGD:13792537
G Spaca5 sperm acrosome associated 5 JBrowse link X 912,770 915,953 RGD:13792537
G Ssc5d scavenger receptor cysteine rich family member with 5 domains JBrowse link 1 72,443,750 72,462,293 RGD:1624291
RGD:1600115
G Stab2 stabilin 2 JBrowse link 7 27,369,853 27,552,078 RGD:1600115
RGD:1624291
G Tac1 tachykinin, precursor 1 JBrowse link 4 33,638,853 33,646,819 RGD:1624291
G Tbk1 TANK-binding kinase 1 JBrowse link 7 63,655,247 63,687,978 RGD:1624291
RGD:1600115
G Tirap TIR domain containing adaptor protein JBrowse link 8 36,382,029 36,399,625 RGD:1624291
G Tlr2 toll-like receptor 2 JBrowse link 2 182,840,171 182,846,061 RGD:1624291
RGD:1600115
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:1624291
G Tnfaip8 TNF alpha induced protein 8 JBrowse link 18 44,664,310 44,779,914 RGD:1624291
G Tnfrsf14 TNF receptor superfamily member 14 JBrowse link 5 172,328,259 172,337,221 RGD:1624291
RGD:13792537
G Tnfsf8 TNF superfamily member 8 JBrowse link 5 79,664,779 79,691,547 RGD:1624291
RGD:1600115
G Vip vasoactive intestinal peptide JBrowse link 1 42,169,307 42,177,582 RGD:1624291
neutrophil mediated killing of gram-positive bacterium term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ctsg cathepsin G JBrowse link 15 35,107,333 35,113,678 RGD:1624291
RGD:1600115
G Ncf1 neutrophil cytosolic factor 1 JBrowse link 12 25,497,104 25,506,300 RGD:1624291
positive regulation of biosynthetic process of antibacterial peptides active against Gram-positive bacteria term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nod2 nucleotide-binding oligomerization domain containing 2 JBrowse link 19 19,342,061 19,389,366 RGD:1624291

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18007
    multi-organism process 2689
      response to other organism 1465
        defense response to other organism 903
          defense response to bacterium 273
            defense response to Gram-positive bacterium 120
              biosynthetic process of antibacterial peptides active against Gram-positive bacteria + 1
              neutrophil mediated killing of gram-positive bacterium + 2
Path 2
Term Annotations click to browse term
  biological_process 18007
    response to stimulus 9858
      response to external stimulus 2924
        response to external biotic stimulus 1469
          response to other organism 1465
            response to bacterium 875
              defense response to bacterium 273
                defense response to Gram-positive bacterium 120
                  biosynthetic process of antibacterial peptides active against Gram-positive bacteria + 1
                  neutrophil mediated killing of gram-positive bacterium + 2
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.