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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of calcium-mediated signaling
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Accession:GO:0050848 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of calcium-mediated signaling, the process in which a cell uses calcium ions to convert an extracellular signal into a response.
Synonyms:exact_synonym: regulation of calcium-mediated signalling


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regulation of calcium-mediated signaling term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BST1 bone marrow stromal cell antigen 1 JBrowse link 3 64,617,903 64,641,131 RGD:13508589
G CMKLR1 chemerin chemokine-like receptor 1 JBrowse link 26 18,487,700 18,539,678 RGD:13508589
G GBP1 guanylate binding protein 1 JBrowse link 6 59,378,069 59,393,388 RGD:13508589
G GPR143 G protein-coupled receptor 143 JBrowse link X 6,438,068 6,479,731 RGD:9068941
G MAPT microtubule associated protein tau JBrowse link 9 9,572,174 9,674,082 RGD:9068941
G PDK2 pyruvate dehydrogenase kinase 2 JBrowse link 9 26,099,457 26,116,094 RGD:13508589
G PTK2B protein tyrosine kinase 2 beta JBrowse link 25 30,137,546 30,264,221 RGD:13508589
G RGN regucalcin JBrowse link X 40,697,292 40,715,491 RGD:9068941
G RIT2 Ras like without CAAX 2 JBrowse link 7 47,597,746 48,064,202 RGD:9068941
G SELENOK selenoprotein K JBrowse link 20 36,109,095 36,115,792 RGD:9068941
G TMBIM4 transmembrane BAX inhibitor motif containing 4 JBrowse link 10 8,643,982 8,670,948 RGD:9068941
G TMEM100 transmembrane protein 100 JBrowse link 9 30,695,711 30,701,730 RGD:13508589
negative regulation of calcineurin-NFAT signaling cascade term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ACTN3 actinin alpha 3 JBrowse link 18 50,787,353 50,801,036 RGD:13508589
G ATP2B4 ATPase plasma membrane Ca2+ transporting 4 JBrowse link 38 321,246 420,262 RGD:13508589
G C3H15orf40 chromosome 3 C15orf40 homolog JBrowse link 3 54,788,092 54,793,197 RGD:13508589
G CHP1 calcineurin like EF-hand protein 1 JBrowse link 30 8,304,939 8,352,833 RGD:13508589
G CMYA5 cardiomyopathy associated 5 JBrowse link 3 27,181,502 27,271,718 RGD:9068941
G DYRK2 dual specificity tyrosine phosphorylation regulated kinase 2 JBrowse link 10 9,982,245 9,994,327 RGD:13508589
G FHL2 four and a half LIM domains 2 JBrowse link 10 37,997,912 38,065,633 RGD:13508589
G GSK3B glycogen synthase kinase 3 beta JBrowse link 33 23,458,369 23,659,878 RGD:13508589
G HOMER3 homer scaffold protein 3 JBrowse link 20 44,179,145 44,186,814 RGD:9068941
G MAPK7 mitogen-activated protein kinase 7 JBrowse link 5 40,831,949 40,836,990 RGD:13508589
G MTOR mechanistic target of rapamycin kinase JBrowse link 2 84,818,893 84,939,283 RGD:13508589
G MYOZ1 myozenin 1 JBrowse link 4 24,158,532 24,165,416 RGD:13508589
G MYOZ2 myozenin 2 JBrowse link 32 38,088,505 38,132,265 RGD:13508589
G PRNP prion protein JBrowse link 24 16,845,224 16,862,319 RGD:9068941
G RCAN1 regulator of calcineurin 1 JBrowse link 31 29,908,046 30,002,412 RGD:9068941
G TBC1D10C TBC1 domain family member 10C JBrowse link 18 50,055,376 50,062,166 RGD:13508589
negative regulation of calcium-mediated signaling term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CD22 CD22 molecule JBrowse link 1 117,261,730 117,285,775 RGD:9068941
G ITPR1 inositol 1,4,5-trisphosphate receptor type 1 JBrowse link 20 12,746,171 13,065,256 RGD:13508589
G LOC484343 sialic acid-binding Ig-like lectin 10 JBrowse link 1 105,532,181 105,575,278 RGD:9068941
G SLA2 Src like adaptor 2 JBrowse link 24 25,396,187 25,426,789 RGD:13508589
negative regulation of CAMKK-AMPK signaling cascade term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G EGLN1 egl-9 family hypoxia inducible factor 1 JBrowse link 4 8,053,486 8,110,791 RGD:9068941
negative regulation of ryanodine-sensitive calcium-release channel activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CALM1 calmodulin 1 JBrowse link 8 61,398,231 61,408,874 RGD:9068941
G CALM2 calmodulin 2 JBrowse link 10 49,299,698 49,314,533 RGD:9068941
G CALM3 calmodulin 3 JBrowse link 1 109,284,729 109,294,491 RGD:9068941
G CASQ2 calsequestrin 2 JBrowse link 17 53,233,966 53,299,093 RGD:13508589
G CLIC2 chloride intracellular channel 2 JBrowse link X 123,268,867 123,291,467 RGD:13508589
G FKBP1A FKBP prolyl isomerase 1A JBrowse link 24 19,618,581 19,643,685 RGD:9068941
G FKBP1B FKBP prolyl isomerase 1B JBrowse link 17 18,534,295 18,544,973 RGD:13508589
G GSTO1 glutathione S-transferase omega 1 JBrowse link 28 16,569,421 16,579,239 RGD:13508589
G PKD2 polycystin 2, transient receptor potential cation channel JBrowse link 32 11,383,441 11,437,603 RGD:13508589
G SRI sorcin JBrowse link 14 14,257,375 14,274,816 RGD:9068941
positive regulation of calcineurin-NFAT signaling cascade term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AKAP5 A-kinase anchoring protein 5 JBrowse link 8 38,891,637 38,902,390 RGD:9068941
G AKAP6 A-kinase anchoring protein 6 JBrowse link 8 11,403,655 11,882,684 RGD:9068941
G C28H10orf71 chromosome 28 C10orf71 homolog JBrowse link 28 1,221,423 1,250,122 RGD:13508589
G CAMTA1 calmodulin binding transcription activator 1 JBrowse link 5 60,566,136 61,429,092 RGD:9068941
G CEACAM1 CEA cell adhesion molecule 1 JBrowse link 1 111,902,429 111,919,191 RGD:9068941
G CHERP calcium homeostasis endoplasmic reticulum protein JBrowse link 20 46,002,532 46,020,445 RGD:13508589
G CHP2 calcineurin like EF-hand protein 2 JBrowse link 6 22,127,422 22,129,637 RGD:9068941
G CIB1 calcium and integrin binding 1 JBrowse link 3 53,184,713 53,209,195 RGD:13508589
G ERBB3 erb-b2 receptor tyrosine kinase 3 JBrowse link 10 406,856 424,746 RGD:13508589
G IGF1 insulin like growth factor 1 JBrowse link 15 41,203,320 41,275,964 RGD:9068941
G LACRT lacritin JBrowse link 27 735,639 738,355 RGD:9068941
G LMCD1 LIM and cysteine rich domains 1 JBrowse link 20 9,524,393 9,582,939 RGD:13508589
G NRG1 neuregulin 1 JBrowse link 16 31,697,958 32,771,888 RGD:13508589
G PTBP1 polypyrimidine tract binding protein 1 JBrowse link 20 57,806,450 57,818,435 RGD:13508589
G SLC12A1 solute carrier family 12 member 1 JBrowse link 30 14,458,373 14,548,870 RGD:9068941
G SLC9A1 solute carrier family 9 member A1 JBrowse link 2 73,054,742 73,103,364 RGD:13508589
G SPPL3 signal peptide peptidase like 3 JBrowse link 26 16,620,236 16,760,616 RGD:13508589
G TNF tumor necrosis factor JBrowse link 12 1,074,561 1,076,425 RGD:13508589
positive regulation of calcium-mediated signaling term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ADA adenosine deaminase JBrowse link 24 32,083,786 32,119,810 RGD:9068941
G ADORA3 adenosine A3 receptor JBrowse link 17 63,895,408 63,898,666 RGD:9068941
G CCL3 chemokine (C-C motif) ligand 3 JBrowse link 9 37,693,711 37,695,137 RGD:13508589
G CCL4 chemokine (C-C motif) ligand 4 JBrowse link 9 37,681,342 37,682,691 RGD:9068941
G CD3E CD3e molecule JBrowse link 5 15,403,724 15,415,259 RGD:13508589
G CD4 CD4 molecule JBrowse link 27 38,204,003 38,250,771 RGD:9068941
G CD8A CD8a molecule JBrowse link 17 38,396,022 38,400,508 RGD:9068941
G CDH13 cadherin 13 JBrowse link 5 68,491,156 69,586,119 RGD:9068941
G EXOC4 exocyst complex component 4 JBrowse link 14 3,334,286 4,077,478 RGD:9068941
G FCER1A Fc fragment of IgE receptor Ia JBrowse link 38 22,683,478 22,688,842 RGD:9068941
G HINT1 histidine triad nucleotide binding protein 1 JBrowse link 11 19,551,057 19,555,390 RGD:9068941
G ITGAL integrin subunit alpha L JBrowse link 6 17,605,611 17,645,134 RGD:9068941
G KDR kinase insert domain receptor JBrowse link 13 47,442,861 47,484,574 RGD:9068941
G L1CAM L1 cell adhesion molecule JBrowse link X 121,708,695 121,722,819 RGD:9068941
G LACRT lacritin JBrowse link 27 735,639 738,355 RGD:9068941
G LHCGR luteinizing hormone/choriogonadotropin receptor JBrowse link 10 50,540,706 50,594,336 RGD:9068941
G NCAM1 neural cell adhesion molecule 1 JBrowse link 5 19,895,587 20,192,334 RGD:9068941
G NEUROD2 neuronal differentiation 2 JBrowse link 9 22,864,708 22,869,044 RGD:13508589
G P2RX4 purinergic receptor P2X 4 JBrowse link 26 7,897,528 7,914,279 RGD:13508589
G SYK spleen associated tyrosine kinase JBrowse link 1 95,903,501 95,955,577 RGD:9068941
G TRAT1 T cell receptor associated transmembrane adaptor 1 JBrowse link 33 14,033,597 14,068,309 RGD:13508589
G TREM2 triggering receptor expressed on myeloid cells 2 JBrowse link 12 9,915,692 9,928,322 RGD:9068941
G ZAP70 zeta chain of T cell receptor associated protein kinase 70 JBrowse link 10 44,887,416 44,913,845 RGD:9068941
positive regulation of inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G HAP1 huntingtin associated protein 1 JBrowse link 9 21,065,770 21,074,462 RGD:9068941
G HTT huntingtin JBrowse link 3 61,076,934 61,221,462 RGD:13508589
G P2RY6 pyrimidinergic receptor P2Y6 JBrowse link 21 24,929,502 24,966,857 RGD:9068941
G PKD2 polycystin 2, transient receptor potential cation channel JBrowse link 32 11,383,441 11,437,603 RGD:13508589
positive regulation of ryanodine-sensitive calcium-release channel activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AKAP6 A-kinase anchoring protein 6 JBrowse link 8 11,403,655 11,882,684 RGD:9068941
G CALM1 calmodulin 1 JBrowse link 8 61,398,231 61,408,874 RGD:13508589
G CALM2 calmodulin 2 JBrowse link 10 49,299,698 49,314,533 RGD:13508589
G CALM3 calmodulin 3 JBrowse link 1 109,284,729 109,294,491 RGD:13508589
G GSTO1 glutathione S-transferase omega 1 JBrowse link 28 16,569,421 16,579,239 RGD:13508589
G JPH2 junctophilin 2 JBrowse link 24 31,664,106 31,674,487 RGD:9068941
G TRDN triadin JBrowse link 1 62,402,763 62,762,717 RGD:13508589
regulation of calcineurin-mediated signaling term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G SLC8A2 solute carrier family 8 member A2 JBrowse link 1 108,544,825 108,575,894 RGD:13508589
regulation of calcineurin-NFAT signaling cascade term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G EFHB EF-hand domain family member B JBrowse link 23 23,337,293 23,384,362 RGD:13508589
G MIR1-1 microRNA mir-1-1 JBrowse link 24 46,481,078 46,481,136 RGD:9068941
G MIR1-2 microRNA mir-1-2 JBrowse link 7 66,214,380 66,214,438 RGD:9068941
G NFAT5 nuclear factor of activated T cells 5 JBrowse link 5 79,995,292 80,115,116 RGD:13508589
G RCAN1 regulator of calcineurin 1 JBrowse link 31 29,908,046 30,002,412 RGD:13508589
G RCAN2 regulator of calcineurin 2 JBrowse link 12 14,427,095 14,647,327 RGD:13508589
G RCAN3 RCAN family member 3 JBrowse link 2 75,118,201 75,167,309 RGD:13508589
regulation of CAMKK-AMPK signaling cascade term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G HTT huntingtin JBrowse link 3 61,076,934 61,221,462 RGD:13508589
G LRRK2 leucine rich repeat kinase 2 JBrowse link 27 13,282,824 13,420,917 RGD:13508589
regulation of inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ASPH aspartate beta-hydroxylase JBrowse link 29 11,812,275 12,022,755 RGD:9068941
G MYO5A myosin VA JBrowse link 30 17,990,521 18,122,160 RGD:9068941
regulation of ryanodine-sensitive calcium-release channel activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CALM1 calmodulin 1 JBrowse link 8 61,398,231 61,408,874 RGD:9068941
G CALM2 calmodulin 2 JBrowse link 10 49,299,698 49,314,533 RGD:9068941
G CALM3 calmodulin 3 JBrowse link 1 109,284,729 109,294,491 RGD:9068941
G DMD dystrophin JBrowse link X 26,290,903 28,444,635 RGD:13508589
G FKBP1A FKBP prolyl isomerase 1A JBrowse link 24 19,618,581 19,643,685 RGD:13508589
G FKBP1B FKBP prolyl isomerase 1B JBrowse link 17 18,534,295 18,544,973 RGD:9068941
G HRC histidine rich calcium binding protein JBrowse link 1 107,304,718 107,308,741 RGD:13508589
G JPH3 junctophilin 3 JBrowse link 5 65,445,329 65,530,288 RGD:13508589
G JSRP1 junctional sarcoplasmic reticulum protein 1 JBrowse link 20 56,782,069 56,785,793 RGD:9068941
G PDE4D phosphodiesterase 4D JBrowse link 2 45,843,767 47,245,263 RGD:9068941
G PLN phospholamban JBrowse link 1 58,579,095 58,590,541 RGD:13508589
G SELENON selenoprotein N JBrowse link 2 74,134,448 74,149,585 RGD:9068941

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16042
    response to stimulus 8473
      regulation of response to stimulus 3693
        regulation of signal transduction 2795
          regulation of intracellular signal transduction 1615
            regulation of calcium-mediated signaling 105
              modulation by symbiont of defense-related host calcium ion flux + 0
              negative regulation of calcium-mediated signaling + 31
              positive regulation of calcium-mediated signaling + 50
              regulation of CAMKK-AMPK signaling cascade + 3
              regulation of calcineurin-mediated signaling + 41
              regulation of inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity + 6
              regulation of light-activated voltage-gated calcium channel activity 0
              regulation of ryanodine-sensitive calcium-release channel activity + 20
Path 2
Term Annotations click to browse term
  biological_process 16042
    biological regulation 11411
      regulation of biological process 10830
        regulation of cellular process 10368
          signal transduction 5381
            intracellular signal transduction 2458
              second-messenger-mediated signaling 447
                calcium-mediated signaling 215
                  regulation of calcium-mediated signaling 105
                    modulation by symbiont of defense-related host calcium ion flux + 0
                    negative regulation of calcium-mediated signaling + 31
                    positive regulation of calcium-mediated signaling + 50
                    regulation of CAMKK-AMPK signaling cascade + 3
                    regulation of calcineurin-mediated signaling + 41
                    regulation of inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity + 6
                    regulation of light-activated voltage-gated calcium channel activity 0
                    regulation of ryanodine-sensitive calcium-release channel activity + 20
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.