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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of calcium-mediated signaling
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Accession:GO:0050848 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of calcium-mediated signaling, the process in which a cell uses calcium ions to convert an extracellular signal into a response.
Synonyms:exact_synonym: regulation of calcium-mediated signalling


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regulation of calcium-mediated signaling term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bst1 bone marrow stromal cell antigen 1 JBrowse link NW_004936477 12,195,323 12,218,261 RGD:9068941
G Cmklr1 chemerin chemokine-like receptor 1 JBrowse link NW_004936769 302,391 304,166 RGD:9068941
G Drd4 dopamine receptor D4 JBrowse link NW_004936888 468,334 471,254 RGD:9068941
G Gpr143 G protein-coupled receptor 143 JBrowse link NW_004936644 196,344 236,659 RGD:9068941
G Mapt microtubule associated protein tau JBrowse link NW_004936541 2,381,411 2,479,984 RGD:9068941
G Pdk2 pyruvate dehydrogenase kinase 2 JBrowse link NW_004936490 11,534,412 11,549,128 RGD:9068941
G Ptk2b protein tyrosine kinase 2 beta JBrowse link NW_004936675 216,970 325,670 RGD:9068941
G Rgn regucalcin JBrowse link NW_004936502 12,872,938 12,891,270 RGD:9068941
G Rit2 Ras like without CAAX 2 JBrowse link NW_004936517 3,145,761 3,535,014 RGD:9068941
G Selenok selenoprotein K JBrowse link NW_004936473 4,546,186 4,552,764 RGD:9068941
G Tmbim4 transmembrane BAX inhibitor motif containing 4 JBrowse link NW_004936545 4,207,344 4,225,071 RGD:9068941
G Tmem100 transmembrane protein 100 JBrowse link NW_004936490 6,958,064 6,963,888 RGD:9068941
negative regulation of calcineurin-NFAT signaling cascade term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Actn3 actinin alpha 3 JBrowse link NW_004936599 3,033,854 3,046,364 RGD:9068941
G Atp2b4 ATPase plasma membrane Ca2+ transporting 4 JBrowse link NW_004936567 944,825 1,039,920 RGD:9068941
G Chp1 calcineurin like EF-hand protein 1 JBrowse link NW_004936471 4,611,980 4,660,320 RGD:9068941
G Cmya5 cardiomyopathy associated 5 JBrowse link NW_004936549 7,468,393 7,555,433 RGD:9068941
G Dyrk2 dual specificity tyrosine phosphorylation regulated kinase 2 JBrowse link NW_004936545 5,542,873 5,555,469 RGD:9068941
G Fhl2 four and a half LIM domains 2 JBrowse link NW_004936764 613,863 656,220 RGD:9068941
G Gsk3b glycogen synthase kinase 3 beta JBrowse link NW_004936536 6,730,070 6,893,818 RGD:9068941
G Homer2 homer scaffold protein 2 JBrowse link NW_004936483 17,500,962 17,634,804 RGD:9068941
G Homer3 homer scaffold protein 3 JBrowse link NW_004936596 2,406,427 2,413,651 RGD:9068941
G Mapk7 mitogen-activated protein kinase 7 JBrowse link NW_004936881 372,713 377,655 RGD:9068941
G Mtor mechanistic target of rapamycin kinase JBrowse link NW_004936474 158,376 282,310 RGD:9068941
G Myoz1 myozenin 1 JBrowse link NW_004936521 5,420,553 5,428,470 RGD:9068941
G Myoz2 myozenin 2 JBrowse link NW_004936869 244,599 284,228 RGD:9068941
G Prnp prion protein JBrowse link NW_004936485 14,104,829 14,118,614 RGD:9068941
G Rcan1 regulator of calcineurin 1 JBrowse link NW_004936500 7,942,099 7,950,256 RGD:9068941
G Tbc1d10c TBC1 domain family member 10C JBrowse link NW_004936599 2,338,131 2,344,134 RGD:9068941
negative regulation of calcium-mediated signaling term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cd22 CD22 molecule JBrowse link NW_004936570 960,592 971,688 RGD:9068941
G Itpr1 inositol 1,4,5-trisphosphate receptor type 1 JBrowse link NW_004936577 3,896,455 4,198,396 RGD:9068941
G Sla2 Src like adaptor 2 JBrowse link NW_004936561 4,408,531 4,427,476 RGD:9068941
negative regulation of CAMKK-AMPK signaling cascade term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Egln1 egl-9 family hypoxia inducible factor 1 JBrowse link NW_004936484 19,343,770 19,386,087 RGD:9068941
negative regulation of ryanodine-sensitive calcium-release channel activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Calm2 calmodulin 2 JBrowse link NW_004936508 5,207,909 5,223,780 RGD:9068941
G Calm3 calmodulin 3 JBrowse link NW_004936664 471,446 480,858 RGD:9068941
G Casq2 calsequestrin 2 JBrowse link NW_004936627 1,001,681 1,069,377 RGD:9068941
G Clic2 chloride intracellular channel 2 JBrowse link NW_004936927 514,989 543,691 RGD:9068941
G Fkbp1a FKBP prolyl isomerase 1A JBrowse link NW_004936485 17,305,376 17,311,797 RGD:9068941
G Fkbp1b FKBP prolyl isomerase 1B JBrowse link NW_004936493 7,916,002 7,922,747 RGD:9068941
G Gsto1 glutathione S-transferase omega 1 JBrowse link NW_004936600 1,932,152 1,943,342 RGD:9068941
G LOC101967074 calmodulin JBrowse link NW_004936488 17,580,425 17,588,480 RGD:9068941
G Pkd2 polycystin 2, transient receptor potential cation channel JBrowse link NW_004936905 76,781 128,995 RGD:9068941
G Sri sorcin JBrowse link NW_004936763 715,884 728,548 RGD:9068941
positive regulation of calcineurin-NFAT signaling cascade term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Akap5 A-kinase anchoring protein 5 JBrowse link NW_004936495 8,173,521 8,179,249 RGD:9068941
G Akap6 A-kinase anchoring protein 6 JBrowse link NW_004936494 6,744,923 7,228,670 RGD:9068941
G Camta1 calmodulin binding transcription activator 1 JBrowse link NW_004936623 1,759,052 2,265,466 RGD:9068941
G Ceacam1 CEA cell adhesion molecule 1 JBrowse link NW_004936706 37,480 53,306 RGD:9068941
G Cherp calcium homeostasis endoplasmic reticulum protein JBrowse link NW_004936596 4,084,091 4,102,096 RGD:9068941
G Chp2 calcineurin like EF-hand protein 2 JBrowse link NW_004936501 8,374,323 8,377,195 RGD:9068941
G Cib1 calcium and integrin binding 1 JBrowse link NW_004936483 15,963,863 15,967,458 RGD:9068941
G CUNH10orf71 chromosome unknown C10orf71 homolog JBrowse link NW_004936728 958,481 982,624 RGD:9068941
G Erbb3 erb-b2 receptor tyrosine kinase 3 JBrowse link NW_004936646 497,783 515,247 RGD:9068941
G Igf1 insulin like growth factor 1 JBrowse link NW_004936492 11,709,623 11,784,028 RGD:9068941
G Lmcd1 LIM and cysteine rich domains 1 JBrowse link NW_004936602 4,420,600 4,478,384 RGD:9068941
G Nrg1 neuregulin 1 JBrowse link NW_004936766 1,104,841 1,306,368 RGD:9068941
G Ptbp1 polypyrimidine tract binding protein 1 JBrowse link NW_004936588 316,348 326,895 RGD:9068941
G Slc12a1 solute carrier family 12 member 1 JBrowse link NW_004936471 10,564,530 10,648,124 RGD:9068941
G Slc9a1 solute carrier family 9 member A1 JBrowse link NW_004936474 11,460,266 11,517,420 RGD:9068941
G Sppl3 signal peptide peptidase like 3 JBrowse link NW_004936668 193,753 229,859 RGD:9068941
G Stimate STIM activating enhancer JBrowse link NW_004936473 3,595,669 3,647,971 RGD:9068941
G Tnf tumor necrosis factor JBrowse link NW_004936727 1,936,066 1,937,766 RGD:9068941
positive regulation of calcium-mediated signaling term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cd3e CD3e molecule JBrowse link NW_004936542 3,379,361 3,390,677 RGD:9068941
G Cd4 CD4 molecule JBrowse link NW_004936709 997,776 1,022,791 RGD:9068941
G Cd8a CD8a molecule JBrowse link NW_004936712 885,301 891,247 RGD:9068941
G Cdh13 cadherin 13 JBrowse link NW_004936641 3,925,185 4,223,421 RGD:9068941
G Fcer1a Fc fragment of IgE receptor Ia JBrowse link NW_004936740 1,201,370 1,206,871 RGD:9068941
G Hint1 histidine triad nucleotide binding protein 1 JBrowse link NW_004936647 3,843,544 3,849,428 RGD:9068941
G Itgal integrin subunit alpha L JBrowse link NW_004936501 12,921,509 12,966,791 RGD:9068941
G Kdr kinase insert domain receptor JBrowse link NW_004936482 17,537,697 17,581,320 RGD:9068941
G L1cam L1 cell adhesion molecule JBrowse link NW_004936809 736,385 768,822 RGD:9068941
G Lhcgr luteinizing hormone/choriogonadotropin receptor JBrowse link NW_004936508 3,928,467 3,983,481 RGD:9068941
G LOC101968601 signal transducer CD24 JBrowse link NW_004936491 16,706,745 16,707,010 RGD:9068941
G LOC101971458 tyrosine-protein kinase ZAP-70 JBrowse link NW_004936744 1,000,105 1,012,712 RGD:9068941
G LOC101972231 T-cell receptor-associated transmembrane adapter 1 JBrowse link NW_004936645 2,459,524 2,491,016 RGD:9068941
G LOC101973578 adenosine receptor A3 JBrowse link NW_004936690 152,777 168,411 RGD:9068941
G Ncam1 neural cell adhesion molecule 1 JBrowse link NW_004936612 1,262,557 1,556,281 RGD:9068941
G Neurod2 neuronal differentiation 2 JBrowse link NW_004936490 14,801,636 14,803,437 RGD:9068941
G P2rx4 purinergic receptor P2X 4 JBrowse link NW_004936558 3,062,279 3,077,493 RGD:9068941
G Syk spleen associated tyrosine kinase JBrowse link NW_004936780 1,553,605 1,601,036 RGD:9068941
G Trem2 triggering receptor expressed on myeloid cells 2 JBrowse link NW_004936476 18,659,725 18,665,406 RGD:9068941
positive regulation of CAMKK-AMPK signaling cascade term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Trem2 triggering receptor expressed on myeloid cells 2 JBrowse link NW_004936476 18,659,725 18,665,406 RGD:9068941
positive regulation of inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hap1 huntingtin associated protein 1 JBrowse link NW_004936490 16,645,116 16,652,310 RGD:9068941
G Htt huntingtin JBrowse link NW_004936477 20,443,101 20,577,167 RGD:9068941
G P2ry6 pyrimidinergic receptor P2Y6 JBrowse link NW_004936498 2,468,020 2,501,344 RGD:9068941
G Pkd2 polycystin 2, transient receptor potential cation channel JBrowse link NW_004936905 76,781 128,995 RGD:9068941
positive regulation of ryanodine-sensitive calcium-release channel activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Akap6 A-kinase anchoring protein 6 JBrowse link NW_004936494 6,744,923 7,228,670 RGD:9068941
G Calm2 calmodulin 2 JBrowse link NW_004936508 5,207,909 5,223,780 RGD:9068941
G Calm3 calmodulin 3 JBrowse link NW_004936664 471,446 480,858 RGD:9068941
G Gsto1 glutathione S-transferase omega 1 JBrowse link NW_004936600 1,932,152 1,943,342 RGD:9068941
G LOC101967074 calmodulin JBrowse link NW_004936488 17,580,425 17,588,480 RGD:9068941
G Trdn triadin JBrowse link NW_004936802 389,653 637,372 RGD:9068941
regulation of calcineurin-mediated signaling term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Slc8a2 solute carrier family 8 member A2 JBrowse link NW_004936664 1,116,543 1,139,586 RGD:9068941
regulation of calcineurin-NFAT signaling cascade term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Efhb EF-hand domain family member B JBrowse link NW_004936473 12,179,950 12,232,093 RGD:9068941
G Nfat5 nuclear factor of activated T cells 5 JBrowse link NW_004936475 19,658,917 19,758,936 RGD:9068941
regulation of CAMKK-AMPK signaling cascade term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Htt huntingtin JBrowse link NW_004936477 20,443,101 20,577,167 RGD:9068941
G Lrrk2 leucine rich repeat kinase 2 JBrowse link NW_004936607 628,469 761,117 RGD:9068941
regulation of inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Asph aspartate beta-hydroxylase JBrowse link NW_004936496 11,604,992 11,815,680 RGD:9068941
G Myo5a myosin VA JBrowse link NW_004936471 14,105,832 14,257,386 RGD:9068941
regulation of ryanodine-sensitive calcium-release channel activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Calm2 calmodulin 2 JBrowse link NW_004936508 5,207,909 5,223,780 RGD:9068941
G Calm3 calmodulin 3 JBrowse link NW_004936664 471,446 480,858 RGD:9068941
G Dmd dystrophin JBrowse link NW_004936553 7,157,526 7,943,703 RGD:9068941
G Fkbp1a FKBP prolyl isomerase 1A JBrowse link NW_004936485 17,305,376 17,311,797 RGD:9068941
G Fkbp1b FKBP prolyl isomerase 1B JBrowse link NW_004936493 7,916,002 7,922,747 RGD:9068941
G Hrc histidine rich calcium binding protein JBrowse link NW_004936664 3,088,072 3,092,034 RGD:9068941
G Jph3 junctophilin 3 JBrowse link NW_004936641 1,619,640 1,668,480 RGD:9068941
G Jsrp1 junctional sarcoplasmic reticulum protein 1 JBrowse link NW_004936588 1,345,880 1,349,583 RGD:9068941
G LOC101967074 calmodulin JBrowse link NW_004936488 17,580,425 17,588,480 RGD:9068941
G Pde4d phosphodiesterase 4D JBrowse link NW_004936480 8,123,437 9,235,586 RGD:9068941
G Pln phospholamban JBrowse link NW_004936658 1,443,626 1,453,770 RGD:9068941
G Selenon selenoprotein N JBrowse link NW_004936474 10,381,646 10,396,638 RGD:9068941

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 11930
    response to stimulus 6376
      regulation of response to stimulus 3291
        regulation of signal transduction 2509
          regulation of intracellular signal transduction 1437
            regulation of calcium-mediated signaling 96
              modulation by symbiont of defense-related host calcium ion flux + 0
              negative regulation of calcium-mediated signaling + 30
              positive regulation of calcium-mediated signaling + 46
              regulation of CAMKK-AMPK signaling cascade + 4
              regulation of calcineurin-mediated signaling + 37
              regulation of inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity + 6
              regulation of light-activated voltage-gated calcium channel activity 0
              regulation of ryanodine-sensitive calcium-release channel activity + 19
Path 2
Term Annotations click to browse term
  biological_process 11930
    biological regulation 8730
      regulation of biological process 8292
        regulation of cellular process 7873
          signal transduction 3675
            intracellular signal transduction 1972
              second-messenger-mediated signaling 360
                calcium-mediated signaling 179
                  regulation of calcium-mediated signaling 96
                    modulation by symbiont of defense-related host calcium ion flux + 0
                    negative regulation of calcium-mediated signaling + 30
                    positive regulation of calcium-mediated signaling + 46
                    regulation of CAMKK-AMPK signaling cascade + 4
                    regulation of calcineurin-mediated signaling + 37
                    regulation of inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity + 6
                    regulation of light-activated voltage-gated calcium channel activity 0
                    regulation of ryanodine-sensitive calcium-release channel activity + 19
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.