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ONTOLOGY REPORT - ANNOTATIONS


Term:positive regulation of binding
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Accession:GO:0051099 term browser browse the term
Definition:Any process that activates or increases the rate or extent of binding, the selective interaction of a molecule with one or more specific sites on another molecule.
Synonyms:exact_synonym: up regulation of binding;   upregulation of binding
 narrow_synonym: activation of binding;   stimulation of binding


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positive regulation of binding term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa2 annexin A2 ISO (MGI:MGI:3847621|PMID:17690254) RGD PMID:17690254 MGI:MGI:3847621 NCBI chr 8:75,687,134...75,723,589
Ensembl chr 8:75,687,100...75,723,594
JBrowse link
G Clic2 chloride intracellular channel 2 ISO (PMID:15916532) RGD PMID:15916532 NCBI chr20:295,338...310,363
Ensembl chr20:295,250...310,380
JBrowse link
G Dph3 diphthamide biosynthesis 3 ISO (PMID:14980502) RGD PMID:14980502 NCBI chr16:8,202,048...8,207,492
Ensembl chr16:8,202,048...8,207,464
JBrowse link
G Eno1 enolase 1 ISO (MGI:MGI:3847621|PMID:17690254) RGD PMID:17690254 MGI:MGI:3847621 NCBI chr 5:167,288,223...167,299,610
Ensembl chr 5:167,288,223...167,299,609
JBrowse link
G H2bc1 H2B clustered histone 1 ISO (MGI:MGI:3847621|PMID:17690254) RGD PMID:17690254 MGI:MGI:3847621 NCBI chr17:43,423,111...43,423,580
Ensembl chr17:43,423,111...43,423,580
JBrowse link
G Myod1 myogenic differentiation 1 ISO (MGI:MGI:5706660|PMID:26658965) RGD PMID:26658965 MGI:MGI:5706660 NCBI chr 1:102,396,538...102,399,248
Ensembl chr 1:102,396,538...102,399,248
JBrowse link
G Pon1 paraoxonase 1 ISO (PMID:15721011) RGD PMID:15721011 NCBI chr 4:30,249,749...30,276,297
Ensembl chr 4:30,249,742...30,276,372
JBrowse link
G Rara retinoic acid receptor, alpha ISO (PMID:20080953) RGD PMID:20080953 NCBI chr10:86,838,819...86,884,224
Ensembl chr10:86,860,685...86,884,210
JBrowse link
G S100a10 S100 calcium binding protein A10 ISO (MGI:MGI:3847621|PMID:17690254) RGD PMID:17690254 MGI:MGI:3847621 NCBI chr 2:193,892,589...193,901,236
Ensembl chr 2:193,892,589...193,901,236
JBrowse link
cohesin loading term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mau2 MAU2 sister chromatid cohesion factor ISO (PMID:22628566) RGD PMID:22628566 NCBI chr16:21,132,115...21,163,257
Ensembl chr16:21,132,147...21,163,257
JBrowse link
G Nipbl NIPBL, cohesin loading factor ISO (PMID:22628566)
(MGI:MGI:6102971|PMID:29094699)
RGD PMID:22628566, PMID:29094699 MGI:MGI:6102971 NCBI chr 2:57,508,830...57,676,197
Ensembl chr 2:57,509,428...57,600,820
JBrowse link
negative regulation of guanyl-nucleotide exchange factor activity term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif2b1 eukaryotic translation initiation factor 2B subunit alpha IDA RGD PMID:9582312 RGD:1581075 NCBI chr12:37,444,136...37,452,391
Ensembl chr12:37,444,072...37,465,398
JBrowse link
G Eif2b4 eukaryotic translation initiation factor 2B subunit delta IDA RGD PMID:9582312 RGD:1581075 NCBI chr 6:26,546,917...26,552,474
Ensembl chr 6:26,546,924...26,552,430
JBrowse link
G Eif2s1 eukaryotic translation initiation factor 2 subunit alpha IDA RGD PMID:9582312 RGD:1581075 NCBI chr 6:102,048,372...102,073,041
Ensembl chr 6:102,048,372...102,073,041
JBrowse link
G Gpsm1 G-protein signaling modulator 1 ISO (PMID:11024022) RGD PMID:11024022 NCBI chr 3:3,767,394...3,794,360
Ensembl chr 3:3,767,394...3,794,359
JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase IEA
ISO
GO_REF:0000107
(PMID:25198505)
Ensembl
RGD
PMID:25198505 GO_REF:0000107 NCBI chr 4:44,747,467...44,854,628
Ensembl chr 4:44,774,741...44,852,665
JBrowse link
G Stmn1 stathmin 1 ISO (PMID:25198505) RGD PMID:25198505 NCBI chr 5:152,680,412...152,686,807
Ensembl chr 5:152,680,407...152,686,806
JBrowse link
negative regulation of Rho guanyl-nucleotide exchange factor activity term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ripor1 RHO family interacting cell polarization regulator 1 ISO (PMID:25588844) RGD PMID:25588844 NCBI chr19:37,555,940...37,584,842
Ensembl chr19:37,568,113...37,587,294
JBrowse link
G Ripor2 RHO family interacting cell polarization regulator 2 ISO
ISS
(PMID:23241886)
GO_REF:0000024
(MGI:MGI:5887189|PMID:25588844)
RGD
UniProt
PMID:23241886, PMID:25588844 GO_REF:0000024, MGI:MGI:5887189 NCBI chr17:42,324,594...42,549,907
Ensembl chr17:42,324,594...42,422,053
JBrowse link
positive regulation of actin filament binding term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase ISO (PMID:24520051) RGD PMID:24520051 NCBI chr 3:10,041,820...10,145,076
Ensembl chr 3:10,041,826...10,144,388
JBrowse link
positive regulation of chromatin binding term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdt1 chromatin licensing and DNA replication factor 1 ISO (PMID:11125146) RGD PMID:11125146 NCBI chr19:55,381,565...55,386,511
Ensembl chr19:55,381,565...55,386,511
JBrowse link
G Ctbp2 C-terminal binding protein 2 ISO (MGI:MGI:5538466|PMID:23775127) RGD PMID:23775127 MGI:MGI:5538466 NCBI chr 1:205,001,354...205,030,565
Ensembl chr 1:205,001,396...205,040,755
JBrowse link
G Ddx11 DEAD/H-box helicase 11 ISO (PMID:26089203) RGD PMID:26089203 NCBI chr 9:114,113,642...114,133,908
Ensembl chr 9:114,111,580...114,132,492
JBrowse link
G Dtx3l deltex E3 ubiquitin ligase 3L ISO UniProtKB:Q8IXQ6 (PMID:26479788) RGD PMID:26479788 NCBI chr11:67,758,093...67,767,623
NCBI chr11:67,768,542...67,772,428
Ensembl chr11:67,757,928...67,767,622
JBrowse link
G Ebf2 EBF transcription factor 2 ISO (MGI:MGI:5495569|PMID:23499423) RGD PMID:23499423 MGI:MGI:5495569 NCBI chr15:43,905,099...44,103,742
Ensembl chr15:43,905,099...44,103,742
JBrowse link
G Gmnn geminin, DNA replication inhibitor ISO (PMID:11125146) RGD PMID:11125146 NCBI chr17:42,302,523...42,310,783
Ensembl chr17:42,302,540...42,310,783
JBrowse link
G Hmbox1 homeobox containing 1 ISO (MGI:MGI:5500098|PMID:23685356) RGD PMID:23685356 MGI:MGI:5500098 NCBI chr15:48,194,709...48,326,310
Ensembl chr15:48,199,995...48,284,548
JBrowse link
G Kat2b lysine acetyltransferase 2B IMP Ep300 RGD PMID:20870727 RGD:9590266 NCBI chr 9:4,440,982...4,492,949 JBrowse link
G Kdm1a lysine demethylase 1A IMP RGD PMID:20418916 RGD:9588315 NCBI chr 5:154,909,003...154,965,171
Ensembl chr 5:154,909,003...154,965,171
JBrowse link
G Kdm4d lysine demethylase 4D ISO (PMID:24550317) RGD PMID:24550317 NCBI chr 8:12,968,192...12,993,651
Ensembl chr 8:13,511,805...13,513,337
JBrowse link
G Mbd2 methyl-CpG binding domain protein 2 IMP RGD PMID:25135974 RGD:9589119 NCBI chr18:65,814,026...65,885,115
Ensembl chr18:65,814,026...65,885,114
JBrowse link
G Med25 mediator complex subunit 25 ISO (PMID:17641689) RGD PMID:17641689 NCBI chr 1:100,872,240...100,887,864
Ensembl chr 1:100,874,976...100,887,853
JBrowse link
G Mfn2 mitofusin 2 IMP Tfap2a RGD PMID:27997345 RGD:12910740 NCBI chr 5:164,684,244...164,715,414
Ensembl chr 5:164,684,509...164,714,145
JBrowse link
G Parp9 poly (ADP-ribose) polymerase family, member 9 ISO UniProtKB:Q8TDB6 (PMID:26479788) RGD PMID:26479788 NCBI chr11:67,724,071...67,758,027
Ensembl chr11:67,724,076...67,756,799
JBrowse link
G Pygo2 pygopus family PHD finger 2 ISO MGI:MGI:5518423 (MGI:MGI:5498404|PMID:23637336) RGD PMID:23637336 MGI:MGI:5498404 NCBI chr 2:188,757,167...188,762,285
Ensembl chr 2:188,757,489...188,762,282
JBrowse link
positive regulation of collagen binding term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Itga2 integrin subunit alpha 2 IMP epithelial cell binding mediated by syndecan-2 RGD PMID:19394307 RGD:2307393 NCBI chr 2:46,996,904...47,097,011
Ensembl chr 2:47,000,323...47,096,961
JBrowse link
positive regulation of core promoter binding term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 IEA
ISO
GO_REF:0000107
(PMID:22723415)
(MGI:MGI:5428344|PMID:22723415)
Ensembl
RGD
PMID:22723415 GO_REF:0000107, MGI:MGI:5428344 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Foxc1 forkhead box C1 ISO (MGI:MGI:5641778|PMID:25808752) RGD PMID:25808752 MGI:MGI:5641778 NCBI chr17:33,947,501...33,951,484
Ensembl chr17:33,947,506...33,951,484
JBrowse link
G Gtf2b general transcription factor IIB IEA
ISO
GO_REF:0000107
(PMID:9841876)
Ensembl
RGD
PMID:9841876 GO_REF:0000107 NCBI chr 2:248,709,433...248,727,741
Ensembl chr 2:248,715,281...248,727,741
JBrowse link
G Ifng interferon gamma ISO (PMID:23629966) RGD PMID:23629966 NCBI chr 7:61,337,383...61,341,419
Ensembl chr 7:61,337,381...61,341,419
JBrowse link
G Klf4 Kruppel like factor 4 ISO (MGI:MGI:5428344|PMID:22723415) RGD PMID:22723415 MGI:MGI:5428344 NCBI chr 5:72,283,311...72,287,669
Ensembl chr 5:72,283,313...72,287,669
JBrowse link
G Pax6 paired box 6 ISS
ISO
IEA
GO_REF:0000024
(PMID:20725088)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:20725088 GO_REF:0000024, GO_REF:0000107 NCBI chr 3:95,700,241...95,728,682
Ensembl chr 3:95,707,386...95,728,624
JBrowse link
G Wnt3a Wnt family member 3A ISO (MGI:MGI:5428344|PMID:22723415) RGD PMID:22723415 MGI:MGI:5428344 NCBI chr10:45,598,898...45,643,151
Ensembl chr10:45,598,912...45,638,035
JBrowse link
positive regulation of DNA binding term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brd4 bromodomain containing 4 ISO (MGI:MGI:3590381|PMID:16109376) RGD PMID:16109376 MGI:MGI:3590381 NCBI chr 7:14,222,101...14,303,055
Ensembl chr 7:14,222,101...14,303,055
JBrowse link
G Calm1 calmodulin 1 ISO
IEA
(MGI:MGI:1331310|PMID:10049721)
GO_REF:0000107
RGD
Ensembl
PMID:10049721 GO_REF:0000107, MGI:MGI:1331310 NCBI chr 6:124,217,241...124,225,292
Ensembl chr 6:124,217,241...124,225,292
JBrowse link
G Calm2 calmodulin 2 IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 6:11,067,675...11,080,078
Ensembl chr15:65,506,874...65,507,968
JBrowse link
G Calm3 calmodulin 3 IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:78,844,520...78,851,628
Ensembl chr 1:78,843,080...78,851,719
JBrowse link
G Edf1 endothelial differentiation-related factor 1 ISO (PMID:10567391) RGD PMID:10567391 NCBI chr 3:2,781,169...2,785,474
Ensembl chr 3:2,781,169...2,785,474
JBrowse link
G Egf epidermal growth factor ISO
ISS
(MGI:MGI:5284803|PMID:15156153)
GO_REF:0000024
RGD
UniProt
PMID:15156153 GO_REF:0000024, MGI:MGI:5284803 NCBI chr 2:68,820,616...68,895,537 JBrowse link
G Ep300 E1A binding protein p300 IMP RGD PMID:19057620 RGD:2311715 NCBI chr 7:122,818,194...122,889,055
Ensembl chr 7:122,818,975...122,861,296
JBrowse link
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit ISO MGI:MGI:2183949 (MGI:MGI:3771455|PMID:17952069) RGD PMID:17952069 MGI:MGI:3771455 NCBI chr 1:80,293,574...80,307,334
Ensembl chr 1:80,293,566...80,307,344
JBrowse link
G Foxc1 forkhead box C1 ISO (PMID:26565916) RGD PMID:26565916 NCBI chr17:33,947,501...33,951,484
Ensembl chr17:33,947,506...33,951,484
JBrowse link
G Hes1 hes family bHLH transcription factor 1 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:5284803|PMID:15156153)
Ensembl
UniProt
RGD
PMID:15156153 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5284803 NCBI chr11:74,312,837...74,315,249
Ensembl chr11:74,312,806...74,315,248
JBrowse link
G Hipk2 homeodomain interacting protein kinase 2 ISO (MGI:MGI:1303245|PMID:9748262) RGD PMID:9748262 MGI:MGI:1303245 NCBI chr 4:66,438,390...66,625,183
Ensembl chr 4:66,445,266...66,624,912
JBrowse link
G Hmgb1 high mobility group box 1 ISO (PMID:11748232), (PMID:19223331) RGD PMID:11748232, PMID:19223331 NCBI chr12:7,082,529...7,090,246
Ensembl chr16:37,500,017...37,502,237
JBrowse link
G Hmgb2 high mobility group box 2 ISO (MGI:MGI:72108|PMID:7720710)
(PMID:19965638)
RGD PMID:7720710, PMID:19965638 MGI:MGI:72108 NCBI chr16:36,077,615...36,080,191
Ensembl chr16:36,077,617...36,080,191
Ensembl chr11:36,077,617...36,080,191
JBrowse link
G Igf1 insulin-like growth factor 1 ISO (PMID:19654000) RGD PMID:19654000 NCBI chr 7:28,412,123...28,491,815
Ensembl chr 7:28,412,198...28,486,609
JBrowse link
G Irf4 interferon regulatory factor 4 ISO (MGI:MGI:3615721|PMID:16428437) RGD PMID:16428437 MGI:MGI:3615721 NCBI chr17:34,886,746...34,905,191
Ensembl chr17:34,886,739...34,905,117
JBrowse link
G Isl1 ISL LIM homeobox 1 ISO (MGI:MGI:3581490|PMID:15659653) RGD PMID:15659653 MGI:MGI:3581490 NCBI chr 2:48,488,911...48,501,217
Ensembl chr 2:48,487,736...48,501,436
JBrowse link
G Itga2 integrin subunit alpha 2 IMP DNA binding by NF-kappaB RGD PMID:19239475 RGD:2307394 NCBI chr 2:46,996,904...47,097,011
Ensembl chr 2:47,000,323...47,096,961
JBrowse link
G Jak2 Janus kinase 2 IMP Stat3 RGD PMID:15322111 RGD:1641932 NCBI chr 1:247,398,667...247,457,521
Ensembl chr 1:247,398,598...247,458,509
JBrowse link
G Mmp8 matrix metallopeptidase 8 IEA
ISO
GO_REF:0000107
(MGI:MGI:6201889|PMID:25049354)
Ensembl
RGD
PMID:25049354 GO_REF:0000107, MGI:MGI:6201889 NCBI chr 8:5,768,808...5,777,741
Ensembl chr 8:5,768,811...5,778,702
JBrowse link
G Mmp9 matrix metallopeptidase 9 ISO
IEA
(PMID:22984561)
GO_REF:0000107
RGD
Ensembl
PMID:22984561 GO_REF:0000107 NCBI chr 3:161,413,410...161,421,473
Ensembl chr 3:161,413,298...161,421,520
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor IMP RGD PMID:12873812 RGD:10059626 NCBI chr 7:102,586,313...102,591,240
Ensembl chr 7:102,586,313...102,591,240
JBrowse link
G Myocd myocardin ISO
IEA
MGI:MGI:88192 (MGI:MGI:5007924|PMID:19342595)
GO_REF:0000107
RGD
Ensembl
PMID:19342595 GO_REF:0000107, MGI:MGI:5007924 NCBI chr10:51,682,053...51,781,458
Ensembl chr10:51,683,540...51,778,986
JBrowse link
G Ngf nerve growth factor ISO (MGI:MGI:6115179|PMID:10362258) RGD PMID:10362258 MGI:MGI:6115179 NCBI chr 2:204,886,158...204,939,523
Ensembl chr 2:204,886,202...204,940,453
JBrowse link
G Nme1 NME/NM23 nucleoside diphosphate kinase 1 ISO (PMID:17975005) RGD PMID:17975005 NCBI chr10:81,657,152...81,666,542
Ensembl chr10:81,657,153...81,666,523
JBrowse link
G Pdx1 pancreatic and duodenal homeobox 1 IMP RGD PMID:11181516 RGD:2311195 NCBI chr12:9,496,044...9,501,211
Ensembl chr12:9,496,044...9,501,213
JBrowse link
G Pitx2 paired-like homeodomain 2 ISO (MGI:MGI:3796777|PMID:18458156), (MGI:MGI:4881620|PMID:21035439) RGD PMID:18458156, PMID:21035439 MGI:MGI:3796777, MGI:MGI:4881620 NCBI chr 2:233,602,732...233,621,059
Ensembl chr 2:233,602,732...233,621,129
JBrowse link
G Plaur plasminogen activator, urokinase receptor ISO
IEA
(PMID:22984561)
GO_REF:0000107
RGD
Ensembl
PMID:22984561 GO_REF:0000107 NCBI chr 1:81,328,171...81,344,954
Ensembl chr 1:81,328,183...81,344,708
JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma ISO UniProtKB:P19793 (PMID:19043829) RGD PMID:19043829 NCBI chr 4:147,274,055...147,399,383
Ensembl chr 4:147,274,107...147,399,380
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase ISO
ISS
(PMID:17314283)
GO_REF:0000024
RGD
ParkinsonsUK-UCL
PMID:17314283 GO_REF:0000024 NCBI chr 1:48,880,015...50,069,998 JBrowse link
G Sirt2 sirtuin 2 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:5572869|PMID:17521387)
Ensembl
UniProt
RGD
PMID:17521387 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5572869 NCBI chr 1:86,948,866...86,971,954
Ensembl chr 1:86,948,918...86,971,952
JBrowse link
G Ski SKI proto-oncogene ISO (PMID:15107821) RGD PMID:15107821 NCBI chr 5:172,556,196...172,623,878
Ensembl chr 5:172,559,135...172,623,899
JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 ISO MGI:MGI:2137495 (MGI:MGI:5007924|PMID:19342595) RGD PMID:19342595 MGI:MGI:5007924 NCBI chr 8:22,648,323...22,739,468
Ensembl chr 8:22,648,323...22,739,468
JBrowse link
G Sumo4 small ubiquitin-like modifier 4 ISO (PMID:16236267) RGD PMID:16236267 NCBI chr 5:14,983,382...14,984,134
Ensembl chr 5:14,983,371...14,984,364
JBrowse link
G Tlr4 toll-like receptor 4 IMP RGD PMID:16272348 RGD:1598594 NCBI chr 5:82,587,424...82,601,056
Ensembl chr 5:82,587,420...82,601,052
JBrowse link
G Trim28 tripartite motif-containing 28 ISO (MGI:MGI:3842857|PMID:19270682) RGD PMID:19270682 MGI:MGI:3842857 NCBI chr 1:65,544,369...65,551,043
Ensembl chr 1:65,544,373...65,551,043
JBrowse link
G Txn1 thioredoxin 1 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:11118054)
Ensembl
UniProt
RGD
PMID:11118054 GO_REF:0000024, GO_REF:0000107 NCBI chr 5:75,049,735...75,057,731
Ensembl chr 5:75,049,747...75,057,752
JBrowse link
positive regulation of ferrous iron binding term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B2m beta-2 microglobulin ISO UniProtKB:P02786|UniProtKB:P02787|UniProtKB:Q30201|UniProtKB:Q9UP52 (PMID:18353247) RGD PMID:18353247 NCBI chr 3:114,087,287...114,093,311
Ensembl chr 3:114,087,287...114,093,309
JBrowse link
G Hfe homeostatic iron regulator ISO UniProtKB:P02786|UniProtKB:P02787|UniProtKB:P61769|UniProtKB:Q9UP52 (PMID:18353247) RGD PMID:18353247 NCBI chr17:43,661,276...43,669,327
Ensembl chr17:43,661,222...43,669,985
JBrowse link
positive regulation of GTP binding term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cln5 CLN5, intracellular trafficking protein ISO (PMID:22431521) RGD PMID:22431521 NCBI chr15:93,634,815...93,644,146 JBrowse link
G Rapgef3 Rap guanine nucleotide exchange factor 3 IMP Ran-GTP RGD PMID:18689492 RGD:9835375 NCBI chr 7:139,232,263...139,254,668
Ensembl chr 7:139,232,251...139,254,551
JBrowse link
G Tgfb2 transforming growth factor, beta 2 ISO (MGI:MGI:5688835|PMID:21984612) RGD PMID:21984612 MGI:MGI:5688835 NCBI chr13:105,039,639...105,142,010
Ensembl chr13:105,039,853...105,141,030
JBrowse link
positive regulation of heparan sulfate binding term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoe apolipoprotein E ISO
IEA
(PMID:7683668)
GO_REF:0000107
RGD
Ensembl
PMID:7683668 GO_REF:0000107 NCBI chr 1:80,612,894...80,616,820
Ensembl chr 1:80,612,895...80,617,057
JBrowse link
positive regulation of heparan sulfate proteoglycan binding term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoe apolipoprotein E ISO
IEA
(PMID:8300609)
GO_REF:0000107
RGD
Ensembl
PMID:8300609 GO_REF:0000107 NCBI chr 1:80,612,894...80,616,820
Ensembl chr 1:80,612,895...80,617,057
JBrowse link
positive regulation of low-density lipoprotein particle receptor binding term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa2 annexin A2 ISO (MGI:MGI:5446858|PMID:22848640)
(PMID:22848640)
RGD PMID:22848640 MGI:MGI:5446858 NCBI chr 8:75,687,134...75,723,589
Ensembl chr 8:75,687,100...75,723,594
JBrowse link
positive regulation of microtubule binding term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase ISO (PMID:24520051) RGD PMID:24520051 NCBI chr 3:10,041,820...10,145,076
Ensembl chr 3:10,041,826...10,144,388
JBrowse link
G Hsf1 heat shock transcription factor 1 IMP RGD PMID:21229611 RGD:10403032 NCBI chr 7:117,538,523...117,565,478
Ensembl chr 7:117,538,523...117,565,478
JBrowse link
G Ppp2ca protein phosphatase 2 catalytic subunit alpha IMP PMID:10640627 ARUK-UCL PMID:10640627 RGD:13464259 NCBI chr10:37,534,449...37,554,861
Ensembl chr10:37,535,871...37,554,664
JBrowse link
G Ppp2cb protein phosphatase 2 catalytic subunit beta IMP PMID:10640627 ARUK-UCL PMID:10640627 RGD:13464259 NCBI chr16:62,273,276...62,294,767
Ensembl chr16:62,273,276...62,294,769
JBrowse link
positive regulation of microtubule plus-end binding term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mapre1 microtubule-associated protein, RP/EB family, member 1 ISO MGI:MGI:2140967 (MGI:MGI:3620309|PMID:16148041) RGD PMID:16148041 MGI:MGI:3620309 NCBI chr 3:149,221,346...149,249,469
Ensembl chr 3:149,221,377...149,249,273
JBrowse link
G Mapre3 microtubule-associated protein, RP/EB family, member 3 ISO MGI:MGI:891995 (MGI:MGI:3620309|PMID:16148041) RGD PMID:16148041 MGI:MGI:3620309 NCBI chr 6:26,878,738...26,923,459
Ensembl chr 6:26,878,744...26,889,882
JBrowse link
positive regulation of mitotic cohesin loading term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nipbl NIPBL, cohesin loading factor IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:57,508,830...57,676,197
Ensembl chr 2:57,509,428...57,600,820
JBrowse link
positive regulation of mRNA 3'-UTR binding term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk9 cyclin-dependent kinase 9 ISO (PMID:19575011) RGD PMID:19575011 NCBI chr 3:11,742,269...11,747,117
Ensembl chr 3:11,742,266...11,747,113
JBrowse link
positive regulation of mRNA binding term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif3c eukaryotic translation initiation factor 3, subunit C ISO UniProtKB:O15371|UniProtKB:P60228|UniProtKB:Q04637 (PMID:24092755) RGD PMID:24092755 NCBI chr 1:197,964,406...197,982,917
Ensembl chr 1:197,964,407...197,982,601
JBrowse link
G Eif3d eukaryotic translation initiation factor 3, subunit D ISO UniProtKB:P60228|UniProtKB:Q04637|UniProtKB:Q99613 (PMID:24092755) RGD PMID:24092755 NCBI chr 7:119,188,189...119,200,578
Ensembl chr 7:119,188,185...119,200,623
JBrowse link
G Eif3e eukaryotic translation initiation factor 3 subunit E ISO UniProtKB:O15371|UniProtKB:Q04637|UniProtKB:Q99613 (PMID:24092755) RGD PMID:24092755 NCBI chr 7:82,997,694...83,037,231 JBrowse link
G Fmr1 FMRP translational regulator 1 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:25464849)
Ensembl
UniProt
RGD
PMID:25464849 GO_REF:0000024, GO_REF:0000107 NCBI chr  X:154,684,924...154,722,369
Ensembl chr  X:154,684,935...154,722,314
JBrowse link
G Hnrnpl heterogeneous nuclear ribonucleoprotein L IMP RGD PMID:19273590 RGD:9999430 NCBI chr 1:86,994,090...87,006,776
Ensembl chr 1:86,996,093...87,006,776
JBrowse link
G Larp6 La ribonucleoprotein 6, translational regulator ISO (PMID:21746880), (PMID:22190748) RGD PMID:21746880, PMID:22190748 NCBI chr 8:65,611,570...65,632,706
Ensembl chr 8:65,611,570...65,632,706
JBrowse link
positive regulation of mRNA cap binding term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif4g1 eukaryotic translation initiation factor 4 gamma, 1 ISO (PMID:23409027) RGD PMID:23409027 NCBI chr11:83,907,659...83,927,683
Ensembl chr11:83,908,109...83,926,524
JBrowse link
positive regulation of polysome binding term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhx9 DExH-box helicase 9 ISO (PMID:22190748) RGD PMID:22190748 NCBI chr13:70,885,503...70,922,278
Ensembl chr13:70,885,504...70,922,245
JBrowse link
positive regulation of protein binding term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl2 ABL proto-oncogene 2, non-receptor tyrosine kinase ISO MGI:MGI:2153719 (MGI:MGI:3042486|PMID:15084284) RGD PMID:15084284 MGI:MGI:3042486 NCBI chr13:74,154,533...74,333,244
Ensembl chr13:74,154,835...74,333,244
JBrowse link
G Ace angiotensin I converting enzyme ISO
IEA
(MGI:MGI:5607357|PMID:25017399)
GO_REF:0000107
RGD
Ensembl
PMID:25017399 GO_REF:0000107, MGI:MGI:5607357 NCBI chr10:94,170,766...94,213,831
Ensembl chr10:94,170,766...94,187,822
JBrowse link
G Actr3 actin related protein 3 IMP Npc1l1, Rab11a, Myo5b RGD PMID:21844200 RGD:5688279 NCBI chr13:41,695,520...41,738,622
Ensembl chr13:41,695,183...41,738,658
JBrowse link
G Add1 adducin 1 IEA
ISO
GO_REF:0000107
(PMID:3693401), (PMID:7642559)
Ensembl
RGD
PMID:3693401, PMID:7642559 GO_REF:0000107 NCBI chr14:81,367,466...81,426,610
Ensembl chr14:81,367,468...81,426,496
JBrowse link
G Add2 adducin 2 IEA
ISO
GO_REF:0000107
(PMID:3693401), (PMID:7642559)
Ensembl
RGD
PMID:3693401, PMID:7642559 GO_REF:0000107 NCBI chr 4:117,691,294...117,887,556
Ensembl chr 4:117,743,710...117,882,464
JBrowse link
G Agrn agrin ISO (MGI:MGI:5545965|PMID:21969364) RGD PMID:21969364 MGI:MGI:5545965 NCBI chr 5:173,589,910...173,622,813
Ensembl chr 5:173,589,819...173,622,645
JBrowse link
G Aktip AKT interacting protein ISO (PMID:14749367) RGD PMID:14749367 NCBI chr19:17,290,048...17,300,054
Ensembl chr19:17,290,178...17,300,050
JBrowse link
G Amfr autocrine motility factor receptor ISO (PMID:24424410) RGD PMID:24424410 NCBI chr19:11,473,538...11,509,500
Ensembl chr19:11,473,541...11,508,102
JBrowse link
G App amyloid beta precursor protein ISO UniProtKB:P49768|UniProtKB:P97484 (PMID:24052308), (PMID:26005850) RGD PMID:24052308, PMID:26005850 NCBI chr11:24,425,013...24,641,872
Ensembl chr11:24,425,005...24,641,858
JBrowse link
G Arhgef7 Rho guanine nucleotide exchange factor 7 ISO
IEA
(MGI:MGI:5314863|PMID:21828338)
GO_REF:0000107
RGD
Ensembl
PMID:21828338 GO_REF:0000107, MGI:MGI:5314863 NCBI chr16:83,006,732...83,117,065
Ensembl chr16:83,006,718...83,132,785
JBrowse link
G Arrb1 arrestin, beta 1 ISO (MGI:MGI:4453294|PMID:19915011) RGD PMID:19915011 MGI:MGI:4453294 NCBI chr 1:164,502,099...164,573,947
Ensembl chr 1:164,502,389...164,593,139
JBrowse link
G B2m beta-2 microglobulin ISO UniProtKB:P02787|UniProtKB:Q07891|UniProtKB:Q30201|UniProtKB:Q9UP52 (PMID:18353247) RGD PMID:18353247 NCBI chr 3:114,087,287...114,093,311
Ensembl chr 3:114,087,287...114,093,309
JBrowse link
G Bambi BMP and activin membrane-bound inhibitor ISO (PMID:18838381) RGD PMID:18838381 NCBI chr17:56,905,419...56,909,675
Ensembl chr17:56,905,112...56,909,992
JBrowse link
G Bmp2 bone morphogenetic protein 2 ISO
IEA
(PMID:16604073)
GO_REF:0000107
RGD
Ensembl
PMID:16604073 GO_REF:0000107 NCBI chr 3:126,335,963...126,346,771
Ensembl chr 3:126,335,863...126,346,318
JBrowse link
G Bmp4 bone morphogenetic protein 4 ISO
IEA
(PMID:23610558)
GO_REF:0000107
RGD
Ensembl
PMID:23610558 GO_REF:0000107 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Cald1 caldesmon 1 IDA RGD PMID:3384851 RGD:2303065 NCBI chr 4:62,103,948...62,291,375
Ensembl chr 4:62,220,736...62,291,489
JBrowse link
G Caprin2 caprin family member 2 ISO
IEA
(PMID:18762581)
GO_REF:0000107
RGD
Ensembl
PMID:18762581 GO_REF:0000107 NCBI chr 4:183,304,993...183,374,195
Ensembl chr 4:183,305,813...183,374,195
JBrowse link
G Cav1 caveolin 1 ISO
IEA
(PMID:24089527)
GO_REF:0000107
RGD
Ensembl
PMID:24089527 GO_REF:0000107 NCBI chr 4:44,597,123...44,630,206
Ensembl chr 4:44,597,123...44,630,200
JBrowse link
G Cdk5 cyclin-dependent kinase 5 ISO MGI:MGI:4941830 (MGI:MGI:4941854|PMID:18054859) RGD PMID:18054859 MGI:MGI:4941854 NCBI chr 4:7,282,945...7,287,427
Ensembl chr 4:7,282,948...7,288,383
JBrowse link
G Cldn5 claudin 5 ISO (PMID:25323998) RGD PMID:25323998 NCBI chr11:86,356,292...86,357,718
Ensembl chr11:86,356,294...86,357,718
JBrowse link
G Csf3 colony stimulating factor 3 ISO (PMID:23001182) RGD PMID:23001182 NCBI chr10:86,616,785...86,619,160
Ensembl chr10:86,616,785...86,619,157
JBrowse link
G Cthrc1 collagen triple helix repeat containing 1 ISO (MGI:MGI:3814781|PMID:18606138) RGD PMID:18606138 MGI:MGI:3814781 NCBI chr 7:77,966,722...77,977,004
Ensembl chr 7:77,966,722...77,977,004
JBrowse link
G Dact1 dishevelled-binding antagonist of beta-catenin 1 ISO UniProtKB:Q13547|UniProtKB:Q9UJU2 (PMID:18936100) RGD PMID:18936100 NCBI chr 6:93,740,440...93,751,003
Ensembl chr 6:93,740,586...93,749,809
JBrowse link
G Derl1 derlin 1 ISO (PMID:24089527) RGD PMID:24089527 NCBI chr 7:97,737,176...97,759,852
Ensembl chr 7:97,737,178...97,759,852
JBrowse link
G Dtx3l deltex E3 ubiquitin ligase 3L ISO (PMID:26479788) RGD PMID:26479788 NCBI chr11:67,758,093...67,767,623
NCBI chr11:67,768,542...67,772,428
Ensembl chr11:67,757,928...67,767,622
JBrowse link
G Eif2ak3 eukaryotic translation initiation factor 2 alpha kinase 3 ISO MGI:MGI:2177666 (MGI:MGI:3614746|PMID:16352659) RGD PMID:16352659 MGI:MGI:3614746 NCBI chr 4:98,648,513...98,709,695
Ensembl chr 4:98,648,545...98,709,694
JBrowse link
G Ep300 E1A binding protein p300 ISO (MGI:MGI:3690196|PMID:16619037) RGD PMID:16619037 MGI:MGI:3690196 NCBI chr 7:122,818,194...122,889,055
Ensembl chr 7:122,818,975...122,861,296
JBrowse link
G Epb41 erythrocyte membrane protein band 4.1 ISO (PMID:3693401)
MGI:MGI:98385|MGI:MGI:98387 (MGI:MGI:4838723|PMID:20585040)
RGD PMID:3693401, PMID:20585040 MGI:MGI:4838723 NCBI chr 5:150,081,727...150,243,186
Ensembl chr 5:150,084,611...150,167,077
JBrowse link
G Epb41l5 erythrocyte membrane protein band 4.1 like 5 ISO (MGI:MGI:3821807|PMID:18794329) RGD PMID:18794329 MGI:MGI:3821807 NCBI chr13:35,622,472...35,673,449
Ensembl chr13:35,580,098...35,668,968
JBrowse link
G Ephb6 Eph receptor B6 ISO MGI:MGI:3522020 (MGI:MGI:3513714|PMID:15599401) RGD PMID:15599401 MGI:MGI:3513714 NCBI chr 4:70,903,253...70,918,514
Ensembl chr 4:70,903,253...70,918,514
JBrowse link
G Fam220a family with sequence similarity 220, member A ISO (MGI:MGI:5648764|PMID:26026268) RGD PMID:26026268 MGI:MGI:5648764 NCBI chr12:13,043,038...13,067,043
Ensembl chr12:13,043,038...13,067,341
JBrowse link
G Fkbp1a FKBP prolyl isomerase 1A ISO (PMID:18346205) RGD PMID:18346205 NCBI chr 3:147,042,944...147,062,725
Ensembl chr 3:147,042,944...147,062,724
JBrowse link
G Flot1 flotillin 1 ISO (PMID:24046456)
(MGI:MGI:5634880|PMID:24046456)
RGD PMID:24046456 MGI:MGI:5634880 NCBI chr20:3,427,890...3,438,418
Ensembl chr20:3,427,880...3,438,396
JBrowse link
G Gcg glucagon IEA
ISO
GO_REF:0000107
(MGI:MGI:4453294|PMID:19915011)
Ensembl
RGD
PMID:19915011 GO_REF:0000107, MGI:MGI:4453294 NCBI chr 3:48,442,635...48,451,650
Ensembl chr 3:48,442,635...48,451,650
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta ISO
ISS
(MGI:MGI:3844787|PMID:19141611)
GO_REF:0000024
RGD
UniProt
PMID:19141611 GO_REF:0000024, MGI:MGI:3844787 NCBI chr11:65,060,884...65,208,842
Ensembl chr11:65,066,235...65,209,268
JBrowse link
G Hfe homeostatic iron regulator ISO UniProtKB:P02787|UniProtKB:P61769|UniProtKB:Q07891|UniProtKB:Q9UP52 (PMID:18353247) RGD PMID:18353247 NCBI chr17:43,661,276...43,669,327
Ensembl chr17:43,661,222...43,669,985
JBrowse link
G Hip1r huntingtin interacting protein 1 related ISO (PMID:19255499) RGD PMID:19255499 NCBI chr12:38,024,517...38,053,184
Ensembl chr12:38,024,519...38,053,085
JBrowse link
G Hipk2 homeodomain interacting protein kinase 2 ISO (MGI:MGI:5306308|PMID:16407227) RGD PMID:16407227 MGI:MGI:5306308 NCBI chr 4:66,438,390...66,625,183
Ensembl chr 4:66,445,266...66,624,912
JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 IMP Akt1-Hsp90 RGD PMID:18443201 RGD:4108490 NCBI chr 9:17,817,791...17,823,163
Ensembl chr 9:17,817,721...17,823,243
JBrowse link
G Hspa4 heat shock protein family A (Hsp70) member 4 IDA RGD PMID:11415446 RGD:4892111 NCBI chr10:38,601,624...38,642,397
Ensembl chr10:38,601,624...38,642,397
JBrowse link
G Ide insulin degrading enzyme ISO (PMID:9830016) RGD PMID:9830016 NCBI chr 1:255,914,465...256,014,168
Ensembl chr 1:255,914,447...256,013,495
JBrowse link
G Krit1 KRIT1, ankyrin repeat containing ISO (MGI:MGI:3837878|PMID:19151727) RGD PMID:19151727 MGI:MGI:3837878 NCBI chr 4:27,438,609...27,473,150
Ensembl chr 4:27,438,609...27,473,150
JBrowse link
G Lfng LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase ISO (MGI:MGI:3575230|PMID:15574878) RGD PMID:15574878 MGI:MGI:3575230 NCBI chr12:16,117,767...16,126,211
Ensembl chr12:16,118,634...16,126,953
JBrowse link
G Lrp1 LDL receptor related protein 1 ISO UniProtKB:P04925 (PMID:23386614) RGD PMID:23386614 NCBI chr 7:70,846,313...70,927,028
Ensembl chr 7:70,846,344...70,926,903
JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 ISO (PMID:21370995) RGD PMID:21370995 NCBI chr 7:132,857,311...133,018,549
Ensembl chr 7:132,857,628...133,018,584
JBrowse link
G Map1lc3b microtubule-associated protein 1 light chain 3 beta IDA RGD PMID:7908909 RGD:633201 NCBI chr19:53,635,449...53,643,970
Ensembl chr19:53,629,779...53,646,058
JBrowse link
G Mark3 microtubule affinity regulating kinase 3 ISS
IEA
ISO
PMID:9543386
GO_REF:0000107
(PMID:9543386)
Ensembl
RGD
PMID:9543386, PMID:9543386 GO_REF:0000107, RGD:13524615 NCBI chr 6:136,040,957...136,129,780
Ensembl chr 6:136,041,777...136,129,661
JBrowse link
G Men1 menin 1 ISO (PMID:20484083) RGD PMID:20484083 NCBI chr 1:221,704,394...221,710,343
Ensembl chr 1:221,704,493...221,710,331
JBrowse link
G Mfng MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase ISO (MGI:MGI:3575230|PMID:15574878) RGD PMID:15574878 MGI:MGI:3575230 NCBI chr 7:119,978,981...119,996,824
Ensembl chr 7:119,978,983...119,996,824
JBrowse link
G Ngf nerve growth factor IMP PMID:20605787 UniProt PMID:20605787 RGD:10402036 NCBI chr 2:204,886,158...204,939,523
Ensembl chr 2:204,886,202...204,940,453
JBrowse link
G Nmd3 NMD3 ribosome export adaptor ISO (PMID:12724356) RGD PMID:12724356 NCBI chr 2:166,402,838...166,428,331
Ensembl chr 2:166,402,838...166,428,331
JBrowse link
G Nphp3 nephrocystin 3 ISO MGI:MGI:6159873 (MGI:MGI:6159309|PMID:29395339) RGD PMID:29395339 MGI:MGI:6159309 NCBI chr 8:112,526,553...112,575,745
Ensembl chr 8:112,526,553...112,575,745
JBrowse link
G Nvl nuclear VCP-like ISO (PMID:29107693) RGD PMID:29107693 NCBI chr13:99,410,026...99,468,783
Ensembl chr13:99,410,026...99,468,778
JBrowse link
G Pacs1 phosphofurin acidic cluster sorting protein 1 IMP RGD PMID:9695949 RGD:633354 NCBI chr 1:220,515,117...220,645,611
Ensembl chr 1:220,516,316...220,644,636
JBrowse link
G Pin1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 ISO (PMID:24964035) RGD PMID:24964035 NCBI chr 8:21,669,236...21,680,615
Ensembl chr 8:21,669,236...21,680,615
JBrowse link
G Pkd1 polycystin 1, transient receptor potential channel interacting ISO (MGI:MGI:5315699|PMID:16311606) RGD PMID:16311606 MGI:MGI:5315699 NCBI chr10:13,914,057...13,962,008
Ensembl chr10:13,915,214...13,962,008
JBrowse link
G Plk2 polo-like kinase 2 IDA Sipa1l1 binding to Btcr and Fbxw11 RGD PMID:18723513 RGD:7241135 NCBI chr 2:41,911,143...41,916,901
Ensembl chr 2:41,911,131...41,916,901
JBrowse link
G Plxnd1 plexin D1 ISO (MGI:MGI:3050159|PMID:15239958) RGD PMID:15239958 MGI:MGI:3050159 NCBI chr 4:147,854,309...147,894,170
Ensembl chr 4:147,854,309...147,893,992
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase ISO (PMID:26911690) RGD PMID:26911690 NCBI chr 1:48,880,015...50,069,998 JBrowse link
G Psen1 presenilin 1 ISO UniProtKB:P49768|UniProtKB:P97484 (PMID:24052308) RGD PMID:24052308 NCBI chr 6:107,169,514...107,221,000
Ensembl chr 6:107,169,528...107,216,798
JBrowse link
G Ralb RAS like proto-oncogene B IEA
ISO
GO_REF:0000107
(PMID:24056301)
Ensembl
RGD
PMID:24056301 GO_REF:0000107 NCBI chr13:35,494,716...35,531,503
Ensembl chr13:35,494,721...35,511,020
JBrowse link
G Ramp1 receptor activity modifying protein 1 IDA RGD PMID:11556887 RGD:1299115 NCBI chr 9:98,313,632...98,364,206
Ensembl chr 9:98,313,632...98,364,205
JBrowse link
G Ramp2 receptor activity modifying protein 2 IDA RGD PMID:11556887 RGD:1299115 NCBI chr10:89,166,170...89,168,962
Ensembl chr10:89,166,890...89,168,965
JBrowse link
G Ran RAN, member RAS oncogene family ISO (PMID:16449645) RGD PMID:16449645 NCBI chr12:31,319,556...31,324,105
Ensembl chr12:31,320,624...31,323,810
JBrowse link
G Rapgef2 Rap guanine nucleotide exchange factor 2 ISO
ISS
(MGI:MGI:5514088|PMID:23800469)
GO_REF:0000024
RGD
UniProt
PMID:23800469 GO_REF:0000024, MGI:MGI:5514088 NCBI chr 2:177,836,191...178,057,378
Ensembl chr 2:177,836,202...178,057,157
JBrowse link
G Rfng RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase ISO
IEA
(MGI:MGI:3575230|PMID:15574878)
GO_REF:0000107
RGD
Ensembl
PMID:15574878 GO_REF:0000107, MGI:MGI:3575230 NCBI chr10:109,963,726...109,966,821
Ensembl chr10:109,943,817...109,966,826
JBrowse link
G Ripk2 receptor-interacting serine-threonine kinase 2 ISO (PMID:11432859) RGD PMID:11432859 NCBI chr 5:29,838,713...29,870,390
Ensembl chr 5:29,838,747...29,870,735
JBrowse link
G Rpl11 ribosomal protein L11 ISO (PMID:18560357) RGD PMID:18560357 NCBI chr 5:154,390,809...154,394,412
Ensembl chr 5:154,388,140...154,394,328
JBrowse link
G Spag8 sperm associated antigen 8 ISO (MGI:MGI:4457979|PMID:20488182) RGD PMID:20488182 MGI:MGI:4457979 NCBI chr 5:59,147,412...59,149,625
Ensembl chr 5:59,147,337...59,149,699
JBrowse link
G Spon1 spondin 1 ISO
IEA
(MGI:MGI:3607023|PMID:16227578)
GO_REF:0000107
RGD
Ensembl
PMID:16227578 GO_REF:0000107, MGI:MGI:3607023 NCBI chr 1:178,568,777...178,935,715
Ensembl chr 1:178,636,544...178,935,051
JBrowse link
G Sppl3 signal peptide peptidase like 3 ISO (MGI:MGI:5640905|PMID:25384971) RGD PMID:25384971 MGI:MGI:5640905 NCBI chr12:47,276,485...47,360,552
Ensembl chr12:47,276,476...47,360,507
JBrowse link
G Spta1 spectrin, alpha, erythrocytic 1 ISO MGI:MGI:95401|MGI:MGI:98387 (MGI:MGI:4838723|PMID:20585040) RGD PMID:20585040 MGI:MGI:4838723 NCBI chr13:92,264,231...92,340,091
Ensembl chr13:92,264,231...92,340,083
JBrowse link
G Sting1 stimulator of interferon response cGAMP interactor 1 ISO (PMID:18818105) RGD PMID:18818105 NCBI chr18:28,529,537...28,535,828
Ensembl chr18:28,529,576...28,535,828
JBrowse link
G Stk3 serine/threonine kinase 3 ISO
IEA
(PMID:22292086)
GO_REF:0000107
RGD
Ensembl
PMID:22292086 GO_REF:0000107 NCBI chr 7:73,617,926...73,883,896
Ensembl chr 7:73,618,644...73,883,812
JBrowse link
G Stk4 serine/threonine kinase 4 ISO (PMID:22292086) RGD PMID:22292086 NCBI chr 3:160,467,552...160,546,540
Ensembl chr 3:160,467,552...160,546,540
JBrowse link
G Taf1 TATA-box binding protein associated factor 1 ISO (PMID:17237821) RGD PMID:17237821 NCBI chr  X:71,412,291...71,486,456
Ensembl chr  X:71,412,289...71,485,085
JBrowse link
G Tcf7l2 transcription factor 7 like 2 ISO (PMID:12799378) RGD PMID:12799378 NCBI chr 1:276,686,911...276,730,517
Ensembl chr 1:276,659,542...276,730,514
Ensembl chr 1:276,659,542...276,730,514
JBrowse link
G Tert telomerase reverse transcriptase ISO (PMID:24415760) RGD PMID:24415760 NCBI chr 1:32,250,876...32,275,330
Ensembl chr 1:32,251,714...32,272,476
JBrowse link
G Tiam1 TIAM Rac1 associated GEF 1 ISO (PMID:23109420) RGD PMID:23109420 NCBI chr11:29,931,083...30,061,173
Ensembl chr11:29,933,163...30,051,103
JBrowse link
G Ticam1 toll-like receptor adaptor molecule 1 ISO (MGI:MGI:4359971|PMID:19734906) RGD PMID:19734906 MGI:MGI:4359971 NCBI chr 9:10,780,185...10,790,280 JBrowse link
G Trib3 tribbles pseudokinase 3 ISO (MGI:MGI:3630230|PMID:16794074) RGD PMID:16794074 MGI:MGI:3630230 NCBI chr 3:147,814,056...147,819,650
Ensembl chr 3:147,813,473...147,819,571
JBrowse link
G Usp33 ubiquitin specific peptidase 33 ISO (PMID:24056301) RGD PMID:24056301 NCBI chr 2:257,567,179...257,602,817
Ensembl chr 2:257,568,613...257,602,810
JBrowse link
G Vtn vitronectin ISO (PMID:1695900) RGD PMID:1695900 NCBI chr10:65,767,960...65,771,040
Ensembl chr10:65,767,053...65,771,038
JBrowse link
G Wnt3a Wnt family member 3A ISO (PMID:16890161) RGD PMID:16890161 NCBI chr10:45,598,898...45,643,151
Ensembl chr10:45,598,912...45,638,035
JBrowse link
G Wnt5a Wnt family member 5A ISO
IEA
(MGI:MGI:5466648|PMID:23109420)
GO_REF:0000107
RGD
Ensembl
PMID:23109420 GO_REF:0000107, MGI:MGI:5466648 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
JBrowse link
positive regulation of receptor binding term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G App amyloid beta precursor protein ISO (PMID:20037584), (PMID:20141570) RGD PMID:20037584, PMID:20141570 NCBI chr11:24,425,013...24,641,872
Ensembl chr11:24,425,005...24,641,858
JBrowse link
G B2m beta-2 microglobulin ISO UniProtKB:P02787|UniProtKB:Q07891|UniProtKB:Q30201|UniProtKB:Q9UP52 (PMID:18353247) RGD PMID:18353247 NCBI chr 3:114,087,287...114,093,311
Ensembl chr 3:114,087,287...114,093,309
JBrowse link
G Bdnf brain-derived neurotrophic factor IDA
ISO
IEA
PMID:12130635
(PMID:12130635)
GO_REF:0000107
RGD
Ensembl
PMID:12130635, PMID:12130635 GO_REF:0000107, RGD:11558005 NCBI chr 3:100,768,637...100,819,216
Ensembl chr 3:100,768,637...100,819,210
JBrowse link
G Gcm2 glial cells missing transcription factor 2 ISO MGI:MGI:1889069 (MGI:MGI:5780847|PMID:19968565) RGD PMID:19968565 MGI:MGI:5780847 NCBI chr17:21,490,402...21,499,516
Ensembl chr17:21,490,402...21,499,516
JBrowse link
G Hfe homeostatic iron regulator ISO UniProtKB:P02787|UniProtKB:P61769|UniProtKB:Q07891|UniProtKB:Q9UP52 (PMID:18353247) RGD PMID:18353247 NCBI chr17:43,661,276...43,669,327
Ensembl chr17:43,661,222...43,669,985
JBrowse link
G Hoxa3 homeobox A3 ISO MGI:MGI:1889069 (MGI:MGI:5780847|PMID:19968565) RGD PMID:19968565 MGI:MGI:5780847 NCBI chr 4:82,137,802...82,181,836
Ensembl chr 4:82,138,683...82,141,385
JBrowse link
G Mmp9 matrix metallopeptidase 9 IEA
ISO
GO_REF:0000107
(PMID:24164424)
Ensembl
RGD
PMID:24164424 GO_REF:0000107 NCBI chr 3:161,413,410...161,421,473
Ensembl chr 3:161,413,298...161,421,520
JBrowse link
G Plcl1 phospholipase C-like 1 ISO
IEA
MGI:MGI:1352756 (MGI:MGI:3694324|PMID:16754670)
GO_REF:0000107
RGD
Ensembl
PMID:16754670 GO_REF:0000107, MGI:MGI:3694324 NCBI chr 9:62,016,112...62,349,244
Ensembl chr 9:62,291,405...62,349,309
JBrowse link
G Plcl2 phospholipase C-like 2 ISO MGI:MGI:3036262 (MGI:MGI:3694324|PMID:16754670) RGD PMID:16754670 MGI:MGI:3694324 NCBI chr 9:1,782,536...1,984,654
Ensembl chr 9:1,782,536...1,984,654
JBrowse link
positive regulation of Rho guanyl-nucleotide exchange factor activity term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epha4 Eph receptor A4 ISO
ISS
(PMID:12775584)
GO_REF:0000024
RGD
UniProt
PMID:12775584 GO_REF:0000024 NCBI chr 9:83,111,222...83,253,486
Ensembl chr 9:83,111,222...83,253,458
JBrowse link
positive regulation of RNA binding term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ncbp1 nuclear cap binding protein subunit 1 ISO (PMID:23793891) RGD PMID:23793891 NCBI chr 5:61,734,118...61,767,098
Ensembl chr 5:61,734,118...61,766,481
JBrowse link
positive regulation of RNA polymerase II regulatory region sequence-specific DNA binding term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddrgk1 DDRGK domain containing 1 ISO (PMID:23675531) RGD PMID:23675531 NCBI chr 3:123,195,580...123,206,828
Ensembl chr 3:123,195,580...123,206,828
JBrowse link
G Ep300 E1A binding protein p300 ISO (PMID:23811396) RGD PMID:23811396 NCBI chr 7:122,818,194...122,889,055
Ensembl chr 7:122,818,975...122,861,296
JBrowse link
G Lamtor5 late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 ISO (PMID:21343296) RGD PMID:21343296 NCBI chr 2:210,034,095...210,039,451
Ensembl chr 2:210,034,095...210,039,451
JBrowse link
positive regulation of single-stranded telomeric DNA binding term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acd ACD, shelterin complex subunit and telomerase recruitment factor ISO (PMID:17237767) RGD PMID:17237767 NCBI chr19:37,665,289...37,668,043
Ensembl chr19:37,665,296...37,667,987
JBrowse link
positive regulation of telomeric DNA binding term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pinx1 PIN2/TERF1 interacting, telomerase inhibitor 1 ISO (PMID:19265708), (PMID:24415760) RGD PMID:19265708, PMID:24415760 NCBI chr15:47,211,682...47,270,343
Ensembl chr15:47,211,583...47,270,317
JBrowse link
positive regulation of transcription regulatory region DNA binding term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata3 GATA binding protein 3 ISO
ISS
(PMID:20368097)
GO_REF:0000024
(MGI:MGI:4844227|PMID:20636338)
RGD
UniProt
PMID:20368097, PMID:20636338 GO_REF:0000024, MGI:MGI:4844227 NCBI chr17:72,419,752...72,452,043
Ensembl chr17:72,429,618...72,450,681
JBrowse link
G H1f0 H1 histone family, member 0 ISO (PMID:19158276) RGD PMID:19158276 NCBI chr 7:120,260,776...120,262,636 JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 ISO
IEA
(PMID:16280598)
GO_REF:0000107
RGD
Ensembl
PMID:16280598 GO_REF:0000107 NCBI chr16:36,371,489...36,373,551
Ensembl chr16:36,371,489...36,373,546
JBrowse link
G Igf1 insulin-like growth factor 1 ISO
IEA
(PMID:15059951)
GO_REF:0000107
RGD
Ensembl
PMID:15059951 GO_REF:0000107 NCBI chr 7:28,412,123...28,491,815
Ensembl chr 7:28,412,198...28,486,609
JBrowse link
G Lgals9 galectin 9 ISO (MGI:MGI:5688819|PMID:25065622) RGD PMID:25065622 MGI:MGI:5688819 NCBI chr10:64,737,022...64,760,195
Ensembl chr10:64,737,022...64,760,201
JBrowse link
G Neurod1 neuronal differentiation 1 ISO (PMID:19619559) RGD PMID:19619559 NCBI chr 3:66,414,314...66,417,617
Ensembl chr 3:66,414,308...66,417,741
JBrowse link
G Niban2 niban apoptosis regulator 2 ISO (PMID:17569660) RGD PMID:17569660 NCBI chr 3:11,921,715...11,971,327
Ensembl chr 3:11,921,715...11,971,327
JBrowse link
G Park7 Parkinsonism associated deglycase ISO
IEA
(PMID:22492997)
GO_REF:0000107
RGD
Ensembl
PMID:22492997 GO_REF:0000107 NCBI chr 5:167,982,438...168,004,724
Ensembl chr 5:167,982,439...168,004,724
JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 IMP PMID:22073128 BHF-UCL PMID:22073128 RGD:8554355 NCBI chr13:98,857,255...98,889,444
Ensembl chr13:98,857,177...98,889,716
JBrowse link
G Pou4f1 POU class 4 homeobox 1 ISO
IEA
ISS
(MGI:MGI:5825439|PMID:9448000)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:9448000 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5825439 NCBI chr15:88,618,255...88,622,712
Ensembl chr15:88,620,470...88,622,413
JBrowse link
G Pou4f2 POU class 4 homeobox 2 ISO
ISS
(MGI:MGI:5825439|PMID:9448000)
GO_REF:0000024
RGD
UniProt
PMID:9448000 GO_REF:0000024, MGI:MGI:5825439 NCBI chr19:33,160,180...33,163,821
Ensembl chr19:33,160,180...33,163,821
JBrowse link
G Rb1 RB transcriptional corepressor 1 ISO
IEA
(PMID:25100735)
GO_REF:0000107
RGD
Ensembl
PMID:25100735 GO_REF:0000107 NCBI chr15:55,081,582...55,209,060
Ensembl chr15:55,083,140...55,209,342
JBrowse link
G Tgfb1 transforming growth factor, beta 1 ISO
ISS
(PMID:22073128)
GO_REF:0000024
RGD
UniProt
PMID:22073128 GO_REF:0000024 NCBI chr 1:82,480,875...82,497,196
Ensembl chr 1:82,480,195...82,497,199
JBrowse link
G Traf6 TNF receptor associated factor 6 ISO (PMID:11751921) RGD PMID:11751921 NCBI chr 3:91,252,829...91,271,607
Ensembl chr 3:91,252,829...91,271,607
JBrowse link
G Trim6 tripartite motif containing 6 ISO (PMID:24882218) RGD PMID:24882218 NCBI chr 1:169,410,084...169,423,305
Ensembl chr 1:169,410,115...169,423,283
JBrowse link
G Twist1 twist family bHLH transcription factor 1 ISO (PMID:12270142) RGD PMID:12270142 NCBI chr 6:53,401,241...53,403,235
Ensembl chr 6:53,401,109...53,403,214
JBrowse link
positive regulation of transferrin receptor binding term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B2m beta-2 microglobulin ISO UniProtKB:P02786|UniProtKB:P02787|UniProtKB:Q30201|UniProtKB:Q9UP52 (PMID:18353247) RGD PMID:18353247 NCBI chr 3:114,087,287...114,093,311
Ensembl chr 3:114,087,287...114,093,309
JBrowse link
G Hfe homeostatic iron regulator ISO UniProtKB:P02786|UniProtKB:P02787|UniProtKB:P61769|UniProtKB:Q9UP52 (PMID:18353247) RGD PMID:18353247 NCBI chr17:43,661,276...43,669,327
Ensembl chr17:43,661,222...43,669,985
JBrowse link
regulation of cohesin loading term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdca5 cell division cycle associated 5 ISO
IBA
(PMID:17349791)
PMID:21873635
RGD PMID:17349791, PMID:21873635 RGD:13792537 NCBI chr 1:221,448,661...221,462,235
Ensembl chr 1:221,448,661...221,462,233
JBrowse link
G Hdac8 histone deacetylase 8 ISO
ISS
(PMID:22885700)
GO_REF:0000024
RGD
UniProt
PMID:22885700 GO_REF:0000024 NCBI chr  X:72,163,777...72,370,058
Ensembl chr  X:72,163,777...72,370,044
JBrowse link
G Rb1 RB transcriptional corepressor 1 ISO
IEA
(PMID:20551165)
GO_REF:0000107
RGD
Ensembl
PMID:20551165 GO_REF:0000107 NCBI chr15:55,081,582...55,209,060
Ensembl chr15:55,083,140...55,209,342
JBrowse link
G Wapl WAPL cohesin release factor ISO
IBA
MGI:MGI:5551791|MGI:MGI:5551807 (MGI:MGI:5544860|PMID:23975099)
PMID:21873635
(PMID:17113138)
RGD PMID:17113138, PMID:23975099, PMID:21873635 MGI:MGI:5544860, RGD:13792537 NCBI chr16:11,029,325...11,108,867
Ensembl chr16:11,032,531...11,106,589
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20017
    biological regulation 13767
      regulation of molecular function 3065
        regulation of binding 408
          positive regulation of binding 203
            negative regulation of guanyl-nucleotide exchange factor activity + 8
            positive regulation of DNA binding + 66
            positive regulation of GTP binding + 4
            positive regulation of RNA binding + 9
            positive regulation of calcium ion binding 0
            positive regulation of chromatin binding + 15
            positive regulation of collagen binding 1
            positive regulation of ferrous iron binding 2
            positive regulation of heparan sulfate binding 1
            positive regulation of lipid binding 0
            positive regulation of polysome binding 1
            positive regulation of protein binding + 100
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.