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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of DNA ligation
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Accession:GO:0051105 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of DNA ligation, the re-formation of a broken phosphodiester bond in the DNA backbone, carried out by DNA ligase.


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positive regulation of DNA ligase activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hmgb1 high mobility group box 1 JBrowse link 12 7,082,529 7,090,246 RGD:1624291
G Xrcc1 X-ray repair cross complementing 1 JBrowse link 1 81,412,635 81,441,680 RGD:1624291
positive regulation of DNA ligation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aplf aprataxin and PNKP like factor JBrowse link 4 119,514,822 119,568,764 RGD:1624291
G Hmgb1 high mobility group box 1 JBrowse link 12 7,082,529 7,090,246 RGD:10449519
G Parp3 poly (ADP-ribose) polymerase family, member 3 JBrowse link 8 115,173,440 115,179,543 RGD:1624291
G Rad51 RAD51 recombinase JBrowse link 3 110,918,240 110,942,920 RGD:1624291

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19439
    metabolic process 11641
      regulation of metabolic process 6582
        regulation of macromolecule metabolic process 6057
          regulation of DNA metabolic process 384
            regulation of DNA ligation 5
              negative regulation of DNA ligation + 0
              positive regulation of DNA ligation + 5
              regulation of DNA ligase activity + 2
Path 2
Term Annotations click to browse term
  biological_process 19439
    metabolic process 11641
      cellular metabolic process 10644
        cellular aromatic compound metabolic process 5507
          nucleobase-containing compound metabolic process 5278
            nucleic acid metabolic process 4788
              DNA metabolic process 885
                regulation of DNA metabolic process 384
                  regulation of DNA ligation 5
                    negative regulation of DNA ligation + 0
                    positive regulation of DNA ligation + 5
                    regulation of DNA ligase activity + 2
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.