Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of smooth muscle cell differentiation
go back to main search page
Accession:GO:0051150 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of smooth muscle cell differentiation.


show annotations for term's descendants           Sort by:
 
regulation of smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 ISO
IEA
MGI:MGI:1347470 (MGI:MGI:3766861|PMID:17881493)
GO_REF:0000107
RGD
Ensembl
PMID:17881493 GO_REF:0000107, MGI:MGI:3766861 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Enpp3 ectonucleotide pyrophosphatase/phosphodiesterase 3 NAS RGD PMID:9642040 RGD:1299488 NCBI chr 1:21,613,148...21,684,483
Ensembl chr 1:21,613,148...21,684,480
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 ISO MGI:MGI:3629660 (MGI:MGI:3688953|PMID:16989802) RGD PMID:16989802 MGI:MGI:3688953 NCBI chr 1:200,590,951...200,696,946
Ensembl chr 1:200,590,953...200,696,928
JBrowse link
G Myocd myocardin IMP RGD PMID:12756293 RGD:1299358 NCBI chr10:51,682,053...51,781,458
Ensembl chr10:51,683,540...51,778,986
JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 ISO
IEA
(MGI:MGI:3641341|PMID:16824956)
GO_REF:0000107
RGD
Ensembl
PMID:16824956 GO_REF:0000107, MGI:MGI:3641341 NCBI chr17:54,656,627...54,714,920
Ensembl chr17:54,658,463...54,714,914
JBrowse link
negative regulation of cardiac vascular smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Klf5 Kruppel-like factor 5 IDA PMID:19542014 BHF-UCL PMID:19542014 RGD:13210556 NCBI chr15:83,703,796...83,722,921
Ensembl chr15:83,703,791...83,722,921
JBrowse link
negative regulation of kidney smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog signaling molecule IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:2388350|PMID:12399320)
Ensembl
UniProt
RGD
PMID:12399320 GO_REF:0000024, GO_REF:0000107, MGI:MGI:2388350 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
negative regulation of smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankrd17 ankyrin repeat domain 17 ISO MGI:MGI:4360512 (MGI:MGI:4360129|PMID:19619540) RGD PMID:19619540 MGI:MGI:4360129 NCBI chr14:19,291,025...19,431,521
Ensembl chr14:19,318,565...19,431,515
JBrowse link
G Ereg epiregulin ISO
ISS
(PMID:14581411)
GO_REF:0000024
RGD
UniProt
PMID:14581411 GO_REF:0000024 NCBI chr14:18,577,620...18,591,395
Ensembl chr14:18,576,355...18,591,394
JBrowse link
G Foxo4 forkhead box O4 ISO (PMID:16054032) RGD PMID:16054032 NCBI chr  X:71,155,284...71,162,158
Ensembl chr  X:71,155,601...71,162,158
JBrowse link
G Mecp2 methyl CpG binding protein 2 ISO (MGI:MGI:5811980|PMID:25722434) RGD PMID:25722434 MGI:MGI:5811980 NCBI chr  X:156,650,389...156,713,813
Ensembl chr  X:156,655,960...156,705,233
JBrowse link
G Med28 mediator complex subunit 28 ISO (MGI:MGI:3762062|PMID:17848560) RGD PMID:17848560 MGI:MGI:3762062 NCBI chr14:70,089,225...70,098,021
Ensembl chr14:70,089,225...70,098,021
JBrowse link
G Prdm6 PR/SET domain 6 ISO (MGI:MGI:3619789|PMID:16537907) RGD PMID:16537907 MGI:MGI:3619789 NCBI chr18:48,433,747...48,538,834
Ensembl chr18:48,434,652...48,538,023
JBrowse link
G Rbpms2 RNA binding protein, mRNA processing factor 2 ISO
IBA
(PMID:25064856)
PMID:21873635
RGD PMID:25064856, PMID:21873635 RGD:13792537 NCBI chr 8:71,165,375...71,200,299
Ensembl chr 8:71,167,305...71,200,536
JBrowse link
G Rcan1 regulator of calcineurin 1 IDA RGD PMID:15148306 RGD:1581653 NCBI chr11:32,539,689...32,620,274
Ensembl chr11:32,539,683...32,550,539
JBrowse link
negative regulation of ureter smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog signaling molecule IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:2388350|PMID:12399320)
Ensembl
UniProt
RGD
PMID:12399320 GO_REF:0000024, GO_REF:0000107, MGI:MGI:2388350 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
negative regulation of vascular associated smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nfatc1 nuclear factor of activated T-cells 1 ISO (PMID:23853098) RGD PMID:23853098 NCBI chr18:77,203,517...77,322,690
Ensembl chr18:77,203,525...77,322,690
JBrowse link
G Nfatc2 nuclear factor of activated T-cells 2 ISO (PMID:23853098) RGD PMID:23853098 NCBI chr 3:165,241,750...165,374,644
Ensembl chr 3:165,245,238...165,360,292
JBrowse link
G Nfatc3 nuclear factor of activated T-cells 3 ISO (PMID:23853098) RGD PMID:23853098 NCBI chr19:38,039,542...38,114,003
Ensembl chr19:38,039,564...38,114,003
JBrowse link
G Pdcd4 programmed cell death 4 ISO (PMID:18548003) RGD PMID:18548003 NCBI chr 1:274,616,625...274,648,204
Ensembl chr 1:274,625,224...274,648,204
JBrowse link
G Pdgfb platelet derived growth factor subunit B ISO
IEA
(PMID:19088079)
GO_REF:0000107
RGD
Ensembl
PMID:19088079 GO_REF:0000107 NCBI chr 7:121,215,458...121,233,092
Ensembl chr 7:121,214,628...121,232,741
JBrowse link
negative regulation of vascular associated smooth muscle cell differentiation involved in phenotypic switching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnmt1 DNA methyltransferase 1 IEA
ISO
GO_REF:0000107
(PMID:27021683)
Ensembl
RGD
PMID:27021683 GO_REF:0000107 NCBI chr 8:21,922,515...21,968,495
Ensembl chr 8:21,922,515...21,968,495
JBrowse link
G Fgf9 fibroblast growth factor 9 IMP PMID:28259995 BHF-UCL PMID:28259995 RGD:13601993 NCBI chr15:38,341,657...38,386,945
Ensembl chr15:38,341,089...38,387,316
JBrowse link
positive regulation of aortic smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cth cystathionine gamma-lyase ISO (PMID:21659522) RGD PMID:21659522 NCBI chr 2:264,266,959...264,293,040
Ensembl chr 2:264,266,984...264,293,046
JBrowse link
positive regulation of cardiac vascular smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gper1 G protein-coupled estrogen receptor 1 ISO
IEA
(PMID:23840305)
GO_REF:0000107
RGD
Ensembl
PMID:23840305 GO_REF:0000107 NCBI chr12:17,309,122...17,315,267
Ensembl chr12:17,309,834...17,311,112
JBrowse link
G Myocd myocardin IDA PMID:16151017 BHF-UCL PMID:16151017 RGD:8554320 NCBI chr10:51,682,053...51,781,458
Ensembl chr10:51,683,540...51,778,986
JBrowse link
positive regulation of kidney smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog signaling molecule IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:2388350|PMID:12399320)
Ensembl
UniProt
RGD
PMID:12399320 GO_REF:0000024, GO_REF:0000107, MGI:MGI:2388350 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
positive regulation of smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myocd myocardin ISO
IEA
(PMID:18451334)
GO_REF:0000107
RGD
Ensembl
PMID:18451334 GO_REF:0000107 NCBI chr10:51,682,053...51,781,458
Ensembl chr10:51,683,540...51,778,986
JBrowse link
G Olfm2 olfactomedin 2 ISO
ISS
(PMID:25298399)
GO_REF:0000024
RGD
UniProt
PMID:25298399 GO_REF:0000024 NCBI chr 8:21,684,307...21,762,000
Ensembl chr 8:21,681,266...21,743,338
JBrowse link
G Pias1 protein inhibitor of activated STAT, 1 IMP RGD PMID:16135793 RGD:2303115 NCBI chr 8:67,771,720...67,869,015
Ensembl chr 8:67,771,720...67,869,019
JBrowse link
G Sirt1 sirtuin 1 ISO (MGI:MGI:5810254|PMID:25526086) RGD PMID:25526086 MGI:MGI:5810254 NCBI chr20:26,831,971...26,851,587
Ensembl chr20:26,833,357...26,852,199
JBrowse link
G Smarcd3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 IDA RGD PMID:23110084 RGD:9586362 NCBI chr 4:7,076,710...7,108,334
Ensembl chr 4:7,076,759...7,108,328
JBrowse link
G Tgfb1 transforming growth factor, beta 1 IDA PMID:8616889 MGI PMID:8616889 RGD:8553354 NCBI chr 1:82,480,875...82,497,196
Ensembl chr 1:82,480,195...82,497,199
JBrowse link
G Tshz3 teashirt zinc finger homeobox 3 ISO MGI:MGI:3810527 (MGI:MGI:3806378|PMID:18776146) RGD PMID:18776146 MGI:MGI:3806378 NCBI chr 1:92,703,180...92,775,020
Ensembl chr 1:92,703,080...92,774,975
JBrowse link
positive regulation of ureter smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog signaling molecule IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:2388350|PMID:12399320)
Ensembl
UniProt
RGD
PMID:12399320 GO_REF:0000024, GO_REF:0000107, MGI:MGI:2388350 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
positive regulation of vascular associated smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eng endoglin ISO (MGI:MGI:3721185|PMID:17628518) RGD PMID:17628518 MGI:MGI:3721185 NCBI chr 3:11,679,530...11,717,486
Ensembl chr 3:11,679,530...11,717,485
JBrowse link
G Kit KIT proto-oncogene receptor tyrosine kinase ISO (PMID:19088079) RGD PMID:19088079 NCBI chr14:35,072,131...35,149,638
Ensembl chr14:35,072,108...35,149,610
JBrowse link
positive regulation of vascular associated smooth muscle cell differentiation involved in phenotypic switching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sod2 superoxide dismutase 2 ISO (PMID:27021683) RGD PMID:27021683 NCBI chr 1:47,914,757...47,921,587
Ensembl chr 1:47,914,759...47,921,587
JBrowse link
regulation of aortic smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sdc4 syndecan 4 NOT IDA PMID:25089138 BHF-UCL PMID:25089138 RGD:11079193 NCBI chr 3:160,872,503...160,891,190
Ensembl chr 3:160,872,503...160,891,190
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20028
    regulation of biological process 13075
      regulation of cellular process 12561
        regulation of cell differentiation 1683
          regulation of muscle cell differentiation 148
            regulation of smooth muscle cell differentiation 34
              negative regulation of smooth muscle cell differentiation + 17
              positive regulation of smooth muscle cell differentiation + 13
              regulation of kidney smooth muscle cell differentiation + 1
              regulation of ureter smooth muscle cell differentiation + 1
              regulation of vascular associated smooth muscle cell differentiation + 15
Path 2
Term Annotations click to browse term
  biological_process 20028
    cellular process 18800
      cellular developmental process 4459
        cell differentiation 4364
          muscle cell differentiation 419
            smooth muscle cell differentiation 77
              regulation of smooth muscle cell differentiation 34
                negative regulation of smooth muscle cell differentiation + 17
                positive regulation of smooth muscle cell differentiation + 13
                regulation of kidney smooth muscle cell differentiation + 1
                regulation of ureter smooth muscle cell differentiation + 1
                regulation of vascular associated smooth muscle cell differentiation + 15
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.