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ONTOLOGY REPORT - ANNOTATIONS


Term:chromosome organization
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Accession:GO:0051276 term browser browse the term
Definition:A process that is carried out at the cellular level that results in the assembly, arrangement of constituent parts, or disassembly of chromosomes, structures composed of a very long molecule of DNA and associated proteins that carries hereditary information. This term covers covalent modifications at the molecular level as well as spatial relationships among the major components of a chromosome.
Synonyms:exact_synonym: chromosome organisation
 related_synonym: chromosome organization and biogenesis;   maintenance of genome integrity;   nuclear genome maintenance
 alt_id: GO:0007001;   GO:0051277


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chromosome organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apc APC regulator of WNT signaling pathway ISO MGI:MGI:1857951|MGI:MGI:98834 (MGI:MGI:3695814|PMID:17200209) RGD PMID:17200209 MGI:MGI:3695814 NCBI chr18:27,011,710...27,106,323
Ensembl chr18:27,047,382...27,105,531
JBrowse link
G Atr ATR serine/threonine kinase ISO MGI:MGI:2176600 (MGI:MGI:1353879|PMID:10691732) RGD PMID:10691732 MGI:MGI:1353879 NCBI chr 8:103,673,578...103,770,886
Ensembl chr 8:103,673,411...103,770,947
JBrowse link
G Blm BLM RecQ like helicase ISO MGI:MGI:1857708|MGI:MGI:2158670 (MGI:MGI:1312959|PMID:9808625), (MGI:MGI:3505667|PMID:15450411) RGD PMID:9808625, PMID:15450411 MGI:MGI:1312959, MGI:MGI:3505667 NCBI chr 1:142,246,773...142,332,616
Ensembl chr 1:142,246,790...142,332,588
JBrowse link
G Bnc1 basonuclin 1 ISO (MGI:MGI:3624199|PMID:16624857) RGD PMID:16624857 MGI:MGI:3624199 NCBI chr 1:143,793,280...143,818,748
NCBI chr 1:143,869,440...143,878,077
Ensembl chr 1:143,793,064...143,818,706
JBrowse link
G Brca2 BRCA2, DNA repair associated ISO MGI:MGI:1930616|MGI:MGI:2448890 (MGI:MGI:1203345|PMID:9660919), (MGI:MGI:3833141|PMID:16859999) RGD PMID:9660919, PMID:16859999 MGI:MGI:1203345, MGI:MGI:3833141 NCBI chr12:503,660...544,754
Ensembl chr12:504,007...544,748
JBrowse link
G Cdca8 cell division cycle associated 8 ISO (PMID:15260989) RGD PMID:15260989 NCBI chr 5:142,911,310...142,933,536
Ensembl chr 5:142,911,305...142,933,526
JBrowse link
G Cenpt centromere protein T ISO
ISS
(PMID:21695110)
GO_REF:0000024
RGD
UniProt
PMID:21695110 GO_REF:0000024 NCBI chr19:37,813,284...37,819,782
Ensembl chr19:37,812,751...37,819,789
JBrowse link
G Cenpw centromere protein W ISO
ISS
(PMID:21695110)
GO_REF:0000024
RGD
UniProt
PMID:21695110 GO_REF:0000024 NCBI chr 1:29,915,443...29,920,598
Ensembl chr 1:29,915,443...29,920,598
JBrowse link
G Ctc1 CST telomere replication complex component 1 ISO MGI:MGI:5427642 (MGI:MGI:5426340|PMID:22531781) RGD PMID:22531781 MGI:MGI:5426340 NCBI chr10:55,596,172...55,616,873
Ensembl chr10:55,596,148...55,616,889
JBrowse link
G Dclre1c DNA cross-link repair 1C ISO MGI:MGI:2667614 (MGI:MGI:2447929|PMID:12504013), (MGI:MGI:3514096|PMID:12615897) RGD PMID:12504013, PMID:12615897 MGI:MGI:2447929, MGI:MGI:3514096 NCBI chr17:78,782,512...78,812,140
Ensembl chr17:78,783,437...78,812,111
JBrowse link
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit ISO MGI:MGI:2183944 (MGI:MGI:3047512|PMID:15199134) RGD PMID:15199134 MGI:MGI:3047512 NCBI chr 1:80,256,973...80,268,198
Ensembl chr 1:80,256,973...80,268,198
JBrowse link
G Gem GTP binding protein overexpressed in skeletal muscle ISO (PMID:22964304) RGD PMID:22964304 NCBI chr 5:25,339,479...25,353,661
Ensembl chr 5:25,349,928...25,353,661
JBrowse link
G Itpa inosine triphosphatase ISO MGI:MGI:4942407 (MGI:MGI:5009783|PMID:20081199) RGD PMID:20081199 MGI:MGI:5009783 NCBI chr 3:123,209,611...123,221,266
Ensembl chr 3:123,209,608...123,221,269
JBrowse link
G Lig4 DNA ligase 4 ISO MGI:MGI:894697 (MGI:MGI:3043875|PMID:15175260) RGD PMID:15175260 MGI:MGI:3043875 NCBI chr16:85,331,771...85,339,496
Ensembl chr16:85,331,866...85,337,769
JBrowse link
G Mre11 MRE11 homolog, double strand break repair nuclease ISO MGI:MGI:3027036 (MGI:MGI:2683367|PMID:14690604) RGD PMID:14690604 MGI:MGI:2683367 NCBI chr 8:13,304,355...13,350,329
Ensembl chr 8:13,305,152...13,352,489
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor ISO
ISS
(PMID:10962037)
GO_REF:0000024
RGD
UniProt
PMID:10962037 GO_REF:0000024 NCBI chr 7:102,586,313...102,591,240
Ensembl chr 7:102,586,313...102,591,240
JBrowse link
G Ncaph2 non-SMC condensin II complex, subunit H2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:130,326,597...130,343,655
Ensembl chr 7:130,326,600...130,342,493
JBrowse link
G Nudt16 nudix hydrolase 16 ISO MGI:MGI:96622 (MGI:MGI:5009783|PMID:20081199) RGD PMID:20081199 MGI:MGI:5009783 NCBI chr 8:113,673,069...113,675,124
Ensembl chr 8:113,672,758...113,675,128
JBrowse link
G Pelo pelota mRNA surveillance and ribosome rescue factor ISO MGI:MGI:2450933 (MGI:MGI:2450001|PMID:12556505) RGD PMID:12556505 MGI:MGI:2450001 NCBI chr 2:47,266,758...47,268,526
Ensembl chr 2:47,266,738...47,268,625
JBrowse link
G Pot1 protection of telomeres 1 ISO MGI:MGI:1920086|MGI:MGI:98834 (MGI:MGI:3692019|PMID:17053789) RGD PMID:17053789 MGI:MGI:3692019 NCBI chr 4:51,888,632...51,946,764
Ensembl chr 4:51,888,634...51,946,715
JBrowse link
G Rad50 RAD50 double strand break repair protein ISO MGI:MGI:2387852|MGI:MGI:3832533 (MGI:MGI:3831647|PMID:19001091) RGD PMID:19001091 MGI:MGI:3831647 NCBI chr10:39,002,130...39,054,042
Ensembl chr10:39,001,498...39,054,142
JBrowse link
G Rad51d RAD51 paralog D ISO MGI:MGI:2386281 (MGI:MGI:3574680|PMID:15781618), (MGI:MGI:5050390|PMID:20813759) RGD PMID:15781618, PMID:20813759 MGI:MGI:3574680, MGI:MGI:5050390 NCBI chr10:70,222,703...70,241,352
Ensembl chr10:70,227,163...70,241,254
JBrowse link
G Rad54l RAD54 like ISO MGI:MGI:1335098 (MGI:MGI:3043875|PMID:15175260) RGD PMID:15175260 MGI:MGI:3043875 NCBI chr 5:134,948,511...134,978,125
Ensembl chr 5:134,948,512...134,978,125
JBrowse link
G Rpa1 replication protein A1 ISO MGI:MGI:3582609 (MGI:MGI:3581950|PMID:15965476) RGD PMID:15965476 MGI:MGI:3581950 NCBI chr10:62,140,419...62,191,518
Ensembl chr10:62,140,419...62,191,512
JBrowse link
G Sfpq splicing factor proline and glutamine rich ISO (MGI:MGI:5050390|PMID:20813759) RGD PMID:20813759 MGI:MGI:5050390 NCBI chr 5:145,079,803...145,088,517
Ensembl chr 5:145,079,803...145,088,498
JBrowse link
G Smc3 structural maintenance of chromosomes 3 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:274,310,120...274,352,856
Ensembl chr 1:274,309,758...274,352,854
JBrowse link
G Tp53 tumor protein p53 ISO MGI:MGI:1920086|MGI:MGI:2141503|MGI:MGI:88039 (MGI:MGI:3692019|PMID:17053789), (MGI:MGI:3695814|PMID:17200209) RGD PMID:17053789, PMID:17200209 MGI:MGI:3692019, MGI:MGI:3695814 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
G Yy1 YY1 transcription factor ISO (MGI:MGI:5009388|PMID:18026119) RGD PMID:18026119 MGI:MGI:5009388 NCBI chr 6:132,702,443...132,726,848
Ensembl chr 6:132,702,448...132,727,046
JBrowse link
G Zfp830 zinc finger protein 830 ISO MGI:MGI:4950703 (MGI:MGI:5428139|PMID:23213458) RGD PMID:23213458 MGI:MGI:5428139 NCBI chr10:70,118,250...70,119,714
Ensembl chr10:70,118,250...70,119,716
JBrowse link
G Zmpste24 zinc metallopeptidase STE24 ISO MGI:MGI:2180033 (MGI:MGI:3583382|PMID:15980864) RGD PMID:15980864 MGI:MGI:3583382 NCBI chr 5:139,982,404...140,015,541
Ensembl chr 5:139,983,680...140,015,541
JBrowse link
apoptotic chromosome condensation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acin1 apoptotic chromatin condensation inducer 1 ISO (PMID:10490026) RGD PMID:10490026 NCBI chr15:33,288,369...33,333,256
Ensembl chr15:33,288,374...33,333,417
JBrowse link
G Dffb DNA fragmentation factor subunit beta ISO (PMID:10959840) RGD PMID:10959840 NCBI chr 5:171,250,559...171,261,875
Ensembl chr 5:171,249,633...171,262,119
JBrowse link
G Ern2 endoplasmic reticulum to nucleus signaling 2 ISO (PMID:11175748) RGD PMID:11175748 NCBI chr 1:192,126,023...192,142,865
Ensembl chr 1:192,126,023...192,142,854
JBrowse link
G Gper1 G protein-coupled estrogen receptor 1 IDA PMID:23907461 UniProt PMID:23907461 RGD:8553942 NCBI chr12:17,309,122...17,315,267
Ensembl chr12:17,309,834...17,311,112
JBrowse link
G Top2a DNA topoisomerase II alpha IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(PMID:10959840)
Ensembl
RGD
PMID:10959840, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr10:86,901,467...86,930,947
Ensembl chr10:86,901,007...86,932,154
JBrowse link
ATP-dependent chromatin remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07028349.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr17:66,238,947...66,241,440 JBrowse link
G Actl6a actin-like 6A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:119,112,776...119,128,870
Ensembl chr 2:119,112,513...119,129,751
JBrowse link
G Actl6b actin-like 6B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:22,194,595...22,211,107
Ensembl chr12:22,194,618...22,211,080
JBrowse link
G Actr5 actin related protein 5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:155,118,567...155,132,073
Ensembl chr 3:155,119,042...155,131,829
JBrowse link
G Actr8 actin related protein 8 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:6,047,977...6,062,586
Ensembl chr16:6,048,004...6,062,550
JBrowse link
G Arid1a AT-rich interaction domain 1A ISO
IBA
(MGI:MGI:5466629|PMID:23129809)
PMID:21873635
RGD PMID:23129809, PMID:21873635 MGI:MGI:5466629, RGD:13792537 NCBI chr 5:151,904,687...151,977,973
Ensembl chr 5:151,904,684...151,977,636
JBrowse link
G Arid1b AT-rich interaction domain 1B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:45,923,119...46,232,301
Ensembl chr 1:45,923,222...46,234,874
JBrowse link
G Cecr2 CECR2, histone acetyl-lysine reader ISO
IBA
(PMID:15640247)
PMID:21873635
RGD PMID:15640247, PMID:21873635 RGD:13792537 NCBI chr 4:153,217,521...153,327,153
Ensembl chr 4:153,217,782...153,322,564
JBrowse link
G Chd3 chromodomain helicase DNA binding protein 3 ISO (PMID:30397230) RGD PMID:30397230 NCBI chr10:55,943,467...55,970,417
Ensembl chr10:55,943,446...55,965,216
JBrowse link
G Chd8 chromodomain helicase DNA binding protein 8 ISO
ISS
(PMID:18378692)
GO_REF:0000024
RGD
UniProt
PMID:18378692 GO_REF:0000024 NCBI chr15:28,612,932...28,672,574
Ensembl chr15:28,612,932...28,672,569
JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor ISO (PMID:29203878) RGD PMID:29203878 NCBI chr16:8,734,028...8,804,610
Ensembl chr16:8,734,035...8,804,610
JBrowse link
G Ino80 INO80 complex ATPase subunit IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:111,186,371...111,266,542
Ensembl chr 3:111,187,711...111,266,542
JBrowse link
G Ino80b INO80 complex subunit B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:113,954,612...113,957,774
Ensembl chr 4:113,954,613...113,957,774
JBrowse link
G LOC103694314 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr19:29,798,912...29,803,955
Ensembl chr19:29,800,855...29,802,083
JBrowse link
G Pbrm1 polybromo 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:7,103,714...7,202,899
Ensembl chr16:7,103,998...7,200,362
JBrowse link
G Smarca1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 ISO (PMID:15640247) RGD PMID:15640247 NCBI chr  X:134,634,651...134,719,503
Ensembl chr  X:134,647,703...134,719,097
JBrowse link
G Smarca2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:244,615,811...244,783,736
Ensembl chr 1:244,615,821...244,782,706
JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 IDA
IBA
IEA
PMID:21873635
GO_REF:0000002
InterPro PMID:9001244, PMID:21873635 GO_REF:0000002, RGD:634124, RGD:13792537 NCBI chr 8:22,648,323...22,739,468
Ensembl chr 8:22,648,323...22,739,468
JBrowse link
G Smarca5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 ISO
IBA
(PMID:15543136)
PMID:21873635
RGD PMID:15543136, PMID:21873635 RGD:13792537 NCBI chr19:30,936,703...30,969,454
Ensembl chr19:30,936,703...30,969,454
JBrowse link
G Smarcad1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1` ISO
IBA
ISS
(PMID:22960744)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:22960744, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 4:95,884,020...95,945,248
Ensembl chr 4:95,884,743...95,945,248
JBrowse link
G Smarcc1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:118,206,678...118,326,264
Ensembl chr 8:118,206,698...118,325,537
JBrowse link
G Smarcc2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:2,875,898...2,905,463
Ensembl chr 7:2,875,909...2,904,453
JBrowse link
G Smarcd2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:94,451,866...94,460,732
Ensembl chr10:94,451,866...94,460,732
JBrowse link
G Smarce1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:87,116,827...87,138,890
Ensembl chr10:87,116,827...87,137,965
JBrowse link
G Srcap Snf2-related CREBBP activator protein IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:198,957,764...199,007,576
Ensembl chr 1:198,960,542...199,007,347
JBrowse link
attachment of mitotic spindle microtubules to kinetochore term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdt1 chromatin licensing and DNA replication factor 1 ISO (PMID:22581055) RGD PMID:22581055 NCBI chr19:55,381,565...55,386,511
Ensembl chr19:55,381,565...55,386,511
JBrowse link
G Cenpc centromere protein C IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:23,611,909...23,670,314
Ensembl chr14:23,611,735...23,670,475
JBrowse link
G Cenpe centromere protein E ISO (PMID:15843429) RGD PMID:15843429 NCBI chr 2:240,395,974...240,454,785
Ensembl chr 2:240,396,152...240,454,747
JBrowse link
G Champ1 chromosome alignment maintaining phosphoprotein 1 ISO
IBA
(PMID:21063390)
PMID:21873635
RGD PMID:21063390, PMID:21873635 RGD:13792537 NCBI chr16:80,839,373...80,850,340
Ensembl chr16:80,839,374...80,850,340
JBrowse link
G Kif2c kinesin family member 2C IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:23891108)
Ensembl
UniProt
RGD
PMID:23891108 GO_REF:0000024, GO_REF:0000107 NCBI chr 5:136,027,923...136,053,268
Ensembl chr 5:136,027,934...136,053,210
JBrowse link
G Mad1l1 mitotic arrest deficient 1 like 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:16,410,083...16,721,232
Ensembl chr12:16,410,083...16,719,824
JBrowse link
G Mis12 MIS12 kinetochore complex component ISO
IEA
ISS
(PMID:23891108)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:23891108 GO_REF:0000024, GO_REF:0000107 NCBI chr10:57,653,685...57,661,833
Ensembl chr10:57,660,067...57,660,687
JBrowse link
G Ndc80 NDC80 kinetochore complex component ISO
IBA
(PMID:23891108), (PMID:25743205)
PMID:21873635
RGD PMID:23891108, PMID:25743205, PMID:21873635 RGD:13792537 NCBI chr 9:119,837,857...119,871,435
Ensembl chr 9:119,839,016...119,871,382
JBrowse link
G Nuf2 NUF2 component of NDC80 kinetochore complex IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:87,818,456...87,847,223
Ensembl chr13:87,818,391...87,847,263
JBrowse link
G Seh1l SEH1-like nucleoporin ISO (PMID:17363900) RGD PMID:17363900 NCBI chr18:63,545,150...63,568,101 JBrowse link
CENP-A containing nucleosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cenpp centromere protein P IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr17:15,429,526...15,603,197
Ensembl chr17:15,429,708...15,603,199
JBrowse link
G Hjurp Holliday junction recognition protein ISO (PMID:19410544), (PMID:19410545) RGD PMID:19410544, PMID:19410545 NCBI chr 9:95,347,739...95,362,228
Ensembl chr 9:95,349,086...95,362,014
JBrowse link
G Itgb3bp integrin subunit beta 3 binding protein IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:118,476,410...118,541,928
Ensembl chr 5:118,476,430...118,673,780
JBrowse link
G Mis18a MIS18 kinetochore protein A ISO
IBA
MGI:MGI:5441069 (MGI:MGI:5438906|PMID:22516971)
PMID:21873635
RGD PMID:22516971, PMID:21873635 MGI:MGI:5438906, RGD:13792537 NCBI chr11:30,880,231...30,893,262
Ensembl chr11:30,879,887...30,893,310
JBrowse link
G Nasp nuclear autoantigenic sperm protein IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:135,446,485...135,472,113
Ensembl chr 5:135,446,962...135,472,116
JBrowse link
G Oip5 Opa interacting protein 5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:111,413,662...111,422,320
Ensembl chr 3:111,416,536...111,422,203
JBrowse link
centromere complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cenpi centromere protein I IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr  X:105,147,045...105,198,798
Ensembl chr  X:105,147,153...105,198,797
JBrowse link
G Cenpo centromere protein O IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 6:28,648,804...28,663,527
Ensembl chr 6:28,649,638...28,663,233
JBrowse link
G Cenpv centromere protein V ISO (PMID:18772885) RGD PMID:18772885 NCBI chr10:48,846,513...48,861,893
Ensembl chr10:48,846,728...48,860,902
JBrowse link
chiasma assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brip1 BRCA1 interacting protein C-terminal helicase 1 ISO MGI:MGI:4129733 (MGI:MGI:5700253|PMID:26490168) RGD PMID:26490168 MGI:MGI:5700253 NCBI chr10:73,507,009...73,632,742
Ensembl chr10:73,507,100...73,629,581
JBrowse link
G Ccnb1ip1 cyclin B1 interacting protein 1 ISO MGI:MGI:3050548 (MGI:MGI:3757893|PMID:17784788), (MGI:MGI:5545848|PMID:24390283) RGD PMID:17784788, PMID:24390283 MGI:MGI:3757893, MGI:MGI:5545848 NCBI chr15:27,720,220...27,736,528
Ensembl chr15:27,720,223...27,733,785
JBrowse link
G Rnf212 ring finger protein 212 ISO (MGI:MGI:5545848|PMID:24390283) RGD PMID:24390283 MGI:MGI:5545848 NCBI chr14:1,959,148...1,998,077
Ensembl chr14:1,959,610...1,998,102
JBrowse link
G Sycp1 synaptonemal complex protein 1 ISO
IBA
IEA
MGI:MGI:109542 (MGI:MGI:5315075|PMID:22164254)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:22164254, PMID:21873635 GO_REF:0000107, MGI:MGI:5315075, RGD:13792537 NCBI chr 2:205,274,766...205,426,869
Ensembl chr 2:205,274,769...205,426,869
JBrowse link
G Sycp3 synaptonemal complex protein 3 ISO MGI:MGI:105931 (MGI:MGI:2179610|PMID:12004129), (MGI:MGI:5315075|PMID:22164254) RGD PMID:12004129, PMID:22164254 MGI:MGI:2179610, MGI:MGI:5315075 NCBI chr 7:29,029,887...29,044,344
Ensembl chr 7:29,029,263...29,044,251
JBrowse link
G Tex11 testis expressed 11 ISO MGI:MGI:3526163 (MGI:MGI:3774244|PMID:18316482) RGD PMID:18316482 MGI:MGI:3774244 NCBI chr  X:70,670,212...70,946,621
Ensembl chr  X:70,670,322...70,946,565
JBrowse link
G Ube2b ubiquitin-conjugating enzyme E2B ISO MGI:MGI:2183933 (MGI:MGI:2450033|PMID:12556476) RGD PMID:12556476 MGI:MGI:2450033 NCBI chr10:37,439,947...37,454,867
Ensembl chr10:37,441,284...37,455,022
JBrowse link
chromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdan1 codanin 1 ISO (PMID:22407294) RGD PMID:22407294 NCBI chr 3:112,660,839...112,676,596
Ensembl chr 3:112,663,383...112,676,556
JBrowse link
G Chaf1a chromatin assembly factor 1 subunit A ISO (PMID:8858152) RGD PMID:8858152 NCBI chr 9:11,000,869...11,027,631
Ensembl chr 9:11,001,129...11,027,506
JBrowse link
G Chaf1b chromatin assembly factor 1 subunit B ISO (PMID:8858152) RGD PMID:8858152 NCBI chr11:34,101,248...34,121,371
Ensembl chr11:34,101,197...34,121,378
JBrowse link
G Hmgb1 high mobility group box 1 ISO (MGI:MGI:3807115|PMID:18650382) RGD PMID:18650382 MGI:MGI:3807115 NCBI chr12:7,082,529...7,090,246
Ensembl chr16:37,500,017...37,502,237
JBrowse link
G Noc2l NOC2-like nucleolar associated transcriptional repressor ISO (PMID:16322561) RGD PMID:16322561 NCBI chr 5:173,659,796...173,672,699
Ensembl chr 5:173,660,921...173,672,459
JBrowse link
G Rbbp4 RB binding protein 4, chromatin remodeling factor ISO (PMID:8858152) RGD PMID:8858152 NCBI chr 5:147,499,880...147,535,240
Ensembl chr 5:147,499,882...147,535,240
JBrowse link
G Tp53 tumor protein p53 ISO (PMID:16322561) RGD PMID:16322561 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
chromatin assembly or disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Baz1b bromodomain adjacent to zinc finger domain, 1B ISO (MGI:MGI:2179578|PMID:11980720) RGD PMID:11980720 MGI:MGI:2179578 NCBI chr12:24,478,882...24,536,851
Ensembl chr12:24,478,898...24,537,313
JBrowse link
G Chd3 chromodomain helicase DNA binding protein 3 ISO (MGI:MGI:1333986|PMID:10204490) RGD PMID:10204490 MGI:MGI:1333986 NCBI chr10:55,943,467...55,970,417
Ensembl chr10:55,943,446...55,965,216
JBrowse link
G Smarca5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 ISO (MGI:MGI:2179578|PMID:11980720) RGD PMID:11980720 MGI:MGI:2179578 NCBI chr19:30,936,703...30,969,454
Ensembl chr19:30,936,703...30,969,454
JBrowse link
G Suv39h2 suppressor of variegation 3-9 homolog 2 ISO (PMID:10949293) RGD PMID:10949293 NCBI chr17:78,762,897...78,782,016
Ensembl chr17:78,762,991...78,782,016
JBrowse link
chromatin maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Supt6h SPT6 homolog, histone chaperone and transcription elongation factor IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:65,470,470...65,507,581
Ensembl chr10:65,470,471...65,507,581
JBrowse link
G Supv3l1 Suv3 like RNA helicase IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:17352692)
Ensembl
UniProt
RGD
PMID:17352692 GO_REF:0000024, GO_REF:0000107 NCBI chr20:32,057,530...32,080,170
Ensembl chr20:32,057,454...32,080,088
JBrowse link
chromatin organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07062859.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:11,859,630...11,860,001 JBrowse link
G AABR07068728.1 IEA GO_REF:0000043 UniProt GO_REF:0000043 Ensembl chr 9:116,652,530...116,981,172 JBrowse link
G Abraxas1 abraxas 1, BRCA1 A complex subunit IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr14:10,424,674...10,439,010
Ensembl chr14:10,424,674...10,439,003
JBrowse link
G Arid1a AT-rich interaction domain 1A ISO PR:Q6DIC0 (MGI:MGI:1934781|PMID:11318604) RGD PMID:11318604 MGI:MGI:1934781 NCBI chr 5:151,904,687...151,977,973
Ensembl chr 5:151,904,684...151,977,636
JBrowse link
G Atad2 ATPase family, AAA domain containing 2 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:97,984,754...98,027,379
Ensembl chr 7:97,984,862...98,026,052
JBrowse link
G Babam1 BRISC and BRCA1 A complex member 1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr16:19,792,720...19,798,886
Ensembl chr16:19,792,838...19,798,894
JBrowse link
G Babam2 BRISC and BRCA1 A complex member 2 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 6:25,666,654...26,135,888
Ensembl chr 6:25,666,655...26,051,229
JBrowse link
G Bag6 BAG cochaperone 6 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr20:5,124,512...5,138,084
Ensembl chr20:5,125,349...5,138,084
JBrowse link
G Brd3 bromodomain containing 3 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:5,995,204...6,054,467
Ensembl chr 3:5,997,315...6,054,483
JBrowse link
G Brdt bromodomain testis associated IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr14:3,437,876...3,462,613
Ensembl chr14:3,405,995...3,462,629
JBrowse link
G Cbx7 chromobox 7 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:121,136,067...121,153,503
Ensembl chr 7:121,136,058...121,153,383
JBrowse link
G Cdan1 codanin 1 ISO (PMID:21364188) RGD PMID:21364188 NCBI chr 3:112,660,839...112,676,596
Ensembl chr 3:112,663,383...112,676,556
JBrowse link
G Chd2 chromodomain helicase DNA binding protein 2 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:134,757,934...134,873,053
Ensembl chr 1:134,757,934...134,871,167
JBrowse link
G Chd4 chromodomain helicase DNA binding protein 4 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:157,612,531...157,645,660
Ensembl chr 4:157,612,536...157,645,659
JBrowse link
G Chd5 chromodomain helicase DNA binding protein 5 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:169,519,212...169,572,059
Ensembl chr 5:169,519,212...169,567,107
JBrowse link
G Chd6 chromodomain helicase DNA binding protein 6 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:156,937,746...157,099,328
Ensembl chr 3:156,937,733...157,099,306
JBrowse link
G Chd9 chromodomain helicase DNA binding protein 9 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr19:17,364,969...17,517,757
Ensembl chr19:17,366,828...17,494,585
JBrowse link
G Dapk3 death-associated protein kinase 3 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:11,392,436...11,400,855
Ensembl chr 7:11,392,437...11,400,805
JBrowse link
G Daxx death-domain associated protein IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr20:5,480,103...5,485,962
Ensembl chr20:5,480,103...5,485,926
JBrowse link
G Dek DEK proto-oncogene IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:17,965,872...17,987,836
Ensembl chr17:17,965,881...17,987,834
JBrowse link
G Dnajc2 DnaJ heat shock protein family (Hsp40) member C2 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:9,881,505...9,908,693
Ensembl chr 4:9,882,904...9,908,689
JBrowse link
G Dnmt1 DNA methyltransferase 1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 8:21,922,515...21,968,495
Ensembl chr 8:21,922,515...21,968,495
JBrowse link
G Dppa3 developmental pluripotency-associated 3 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:155,437,675...155,441,059
Ensembl chr 3:111,298,713...111,299,189
Ensembl chr 4:111,298,713...111,299,189
JBrowse link
G Ehmt1 euchromatic histone lysine methyltransferase 1 ISO (PMID:12004135) RGD PMID:12004135 NCBI chr 3:1,966,974...2,123,858
Ensembl chr 3:1,960,957...2,123,820
JBrowse link
G Fam50a family with sequence similarity 50, member A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:156,392,646...156,399,763
Ensembl chr  X:156,392,630...156,399,760
JBrowse link
G Fam50b family with sequence similarity 50, member B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:30,864,189...30,883,427
Ensembl chr17:30,864,167...30,865,419
JBrowse link
G Foxa2 forkhead box A2 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:142,383,084...142,387,493
Ensembl chr 3:142,383,278...142,387,481
JBrowse link
G Foxa3 forkhead box A3 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:79,921,292...79,930,219
Ensembl chr 1:79,920,752...79,930,263
JBrowse link
G Ftx FTX transcript, XIST regulator ISO (MGI:MGI:4936795|PMID:21118898) RGD PMID:21118898 MGI:MGI:4936795 NCBI chr  X:74,440,265...74,484,164 JBrowse link
G Gatad1 GATA zinc finger domain containing 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:27,647,005...27,658,533
Ensembl chr 4:27,647,335...27,657,167
JBrowse link
G Gpx4 glutathione peroxidase 4 ISO
ISS
(MGI:MGI:1934492|PMID:11344099)
GO_REF:0000024
RGD
UniProt
PMID:11344099 GO_REF:0000024, MGI:MGI:1934492 NCBI chr 7:12,516,357...12,519,154
Ensembl chr 7:12,516,352...12,519,154
JBrowse link
G H1f5 H1.5 linker histone, cluster member ISO (PMID:22956909) RGD PMID:22956909 NCBI chr17:44,766,313...44,766,981
Ensembl chr17:44,766,313...44,766,981
JBrowse link
G H2ac1 H2A clustered histone 1 ISO
IBA
(MGI:MGI:5569674|PMID:24506885)
PMID:21873635
RGD PMID:24506885, PMID:21873635 MGI:MGI:5569674, RGD:13792537 NCBI chr17:43,422,454...43,422,846
Ensembl chr17:43,422,454...43,422,846
JBrowse link
G H2ac12 H2A clustered histone 12 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:44,527,990...44,528,557
Ensembl chr17:44,528,125...44,528,511
JBrowse link
G H2ac20 H2A clustered histone 20 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:198,360,271...198,360,735
Ensembl chr 2:198,360,301...198,360,678
JBrowse link
G H2ac21 H2A clustered histone 21 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:198,359,754...198,360,146
Ensembl chr 2:198,359,754...198,360,146
JBrowse link
G H2afb3 H2A histone family, member B3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:88,602,135...88,602,485
Ensembl chr  X:88,602,135...88,602,485
JBrowse link
G H2aj H2A.J histone IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:170,766,900...170,767,384
Ensembl chr 4:170,766,900...170,767,382
JBrowse link
G H2ax H2A.X variant histone IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:48,665,652...48,666,981
Ensembl chr 8:48,665,652...48,666,981
JBrowse link
G H2az1 H2A.Z variant histone 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:243,105,224...243,107,333
Ensembl chr 2:243,105,674...243,106,956
JBrowse link
G H2az2 H2A.Z variant histone 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:86,687,782...86,706,639
Ensembl chr14:86,687,782...86,706,626
JBrowse link
G H2bc1 H2B clustered histone 1 ISO (MGI:MGI:5569674|PMID:24506885) RGD PMID:24506885 MGI:MGI:5569674 NCBI chr17:43,423,111...43,423,580
Ensembl chr17:43,423,111...43,423,580
JBrowse link
G Hdac5 histone deacetylase 5 TAS RGD PMID:12896970 RGD:1304416 NCBI chr10:90,140,183...90,169,853
Ensembl chr10:90,140,183...90,151,042
JBrowse link
G Hdac7 histone deacetylase 7 TAS PMID:12711221 UniProt PMID:12711221 RGD:8553516 NCBI chr 7:139,280,396...139,319,108
Ensembl chr 7:139,281,187...139,318,455
JBrowse link
G Hist1h2ac histone cluster 1 H2A family member C IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:44,520,484...44,521,142
Ensembl chr17:44,520,537...44,520,929
Ensembl chr17:44,520,537...44,520,929
Ensembl chr17:44,520,537...44,520,929
JBrowse link
G Hist1h2af histone cluster 1 H2A family member F IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:43,627,237...43,627,629
Ensembl chr17:43,627,237...43,627,629
JBrowse link
G Hist1h2ah histone cluster 1 H2A family member H IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:43,632,354...43,632,851
Ensembl chr17:44,747,796...44,748,188
Ensembl chr17:44,747,796...44,748,188
JBrowse link
G Hist1h2ai histone cluster 1, H2ai IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:44,758,412...44,759,675
Ensembl chr17:44,520,537...44,520,929
Ensembl chr17:44,520,537...44,520,929
Ensembl chr17:44,520,537...44,520,929
JBrowse link
G hist1h2ail2 histone cluster 1, H2ai-like2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:44,794,087...44,794,563
Ensembl chr17:44,520,537...44,520,929
Ensembl chr17:44,520,537...44,520,929
Ensembl chr17:44,520,537...44,520,929
JBrowse link
G Hist1h2ak histone cluster 1, H2ak IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:44,840,990...44,841,382
Ensembl chr17:44,840,990...44,841,382
JBrowse link
G Hist1h2an histone cluster 1, H2an IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:43,779,174...43,779,775
Ensembl chr17:44,520,537...44,520,929
Ensembl chr17:44,520,537...44,520,929
Ensembl chr17:44,520,537...44,520,929
Ensembl chr17:44,520,537...44,520,929
JBrowse link
G Hist1h2ao histone cluster 1, H2ao IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:44,744,534...44,744,931
Ensembl chr17:43,770,250...43,770,561
Ensembl chr17:43,770,250...43,770,561
Ensembl chr17:43,770,250...43,770,561
Ensembl chr17:43,770,250...43,770,561
Ensembl chr 2:43,770,250...43,770,561
Ensembl chr17:43,770,250...43,770,561
Ensembl chr17:43,770,250...43,770,561
Ensembl chr17:43,770,250...43,770,561
Ensembl chr 4:43,770,250...43,770,561
Ensembl chr 4:43,770,250...43,770,561
Ensembl chr 4:43,770,250...43,770,561
Ensembl chr 4:43,770,250...43,770,561
JBrowse link
G Hist2h2aa2 histone cluster 2 H2A family member A2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:198,381,678...198,382,247
Ensembl chr 2:198,388,809...198,389,201
Ensembl chr 2:198,388,809...198,389,201
JBrowse link
G Hist2h2aa3 histone cluster 2 H2A family member A3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:198,388,766...198,389,293
Ensembl chr 2:198,388,809...198,389,201
Ensembl chr 2:198,388,809...198,389,201
JBrowse link
G Hist3h2a histone cluster 3, H2a IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:45,297,603...45,299,155 JBrowse link
G Hmgn1 high mobility group nucleosome binding domain 1 ISO MGI:MGI:3590648 (MGI:MGI:3590574|PMID:12660172) RGD PMID:12660172 MGI:MGI:3590574 NCBI chr11:36,474,028...36,479,947
Ensembl chr11:36,474,840...36,479,868
JBrowse link
G Hmgn3 high mobility group nucleosomal binding domain 3 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 8:90,628,203...90,665,055
Ensembl chr 8:90,628,209...90,664,554
JBrowse link
G Hmgn5 high mobility group nucleosome binding domain 5 ISO MGI:MGI:5588022 (MGI:MGI:5578301|PMID:24392144) RGD PMID:24392144 MGI:MGI:5578301 NCBI chr  X:80,134,557...80,142,902
Ensembl chr  X:80,134,557...80,142,902
JBrowse link
G Hmgn5b high mobility group nucleosome binding domain 5B IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:124,477,164...124,485,737
Ensembl chr 1:124,477,164...124,485,724
JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr13:96,222,093...96,238,845
Ensembl chr13:96,225,912...96,238,572
JBrowse link
G Hypm huntingtin interacting protein M IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:13,989,401...13,989,955
Ensembl chr  X:13,989,401...13,989,955
JBrowse link
G Ing1 inhibitor of growth family, member 1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr16:83,277,055...83,278,120
Ensembl chr16:83,276,273...83,278,119
JBrowse link
G Ing2 inhibitor of growth family, member 2 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr16:47,714,756...47,725,836
Ensembl chr16:47,717,951...47,725,836
JBrowse link
G L3mbtl1 L3MBTL histone methyl-lysine binding protein 1 ISO (PMID:17540172) RGD PMID:17540172 NCBI chr 3:159,316,580...159,348,914
Ensembl chr 3:159,321,310...159,347,631
JBrowse link
G L3mbtl2 L3MBTL histone methyl-lysine binding protein 2 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:122,896,860...122,918,025
Ensembl chr 7:122,896,871...122,918,036
JBrowse link
G L3mbtl3 L3MBTL histone methyl-lysine binding protein 3 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:19,998,776...20,097,298
Ensembl chr 1:20,022,793...20,097,099
JBrowse link
G LOC100363125 rCG42854-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:13,991,860...13,992,606
Ensembl chr  X:13,992,064...13,992,429
JBrowse link
G LOC100910130 protein FAM50A-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:104,949,605...104,956,709
Ensembl chr 4:104,949,597...104,956,714
JBrowse link
G LOC100910554 histone H2A type 1-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:44,738,552...44,739,195
Ensembl chr17:44,738,643...44,739,035
JBrowse link
G LOC103690002 histone H2A.J IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:170,148,955...170,149,479
Ensembl chr 4:170,149,029...170,149,418
JBrowse link
G LOC103690190 histone H2A type 1-E IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:44,747,686...44,748,229
Ensembl chr17:44,747,796...44,748,188
Ensembl chr17:44,747,796...44,748,188
JBrowse link
G LOC680063 similar to histone 2a IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G LOC684773 similar to histone 2a IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:43,777,353...43,777,827
Ensembl chr17:44,520,537...44,520,929
Ensembl chr17:44,520,537...44,520,929
Ensembl chr17:44,520,537...44,520,929
JBrowse link
G Lrwd1 leucine-rich repeats and WD repeat domain containing 1 ISO (PMID:20932478) RGD PMID:20932478 NCBI chr12:23,574,234...23,587,262
Ensembl chr12:23,574,187...23,587,276
JBrowse link
G Macroh2a1 macroH2A.1 histone IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:9,282,109...9,344,698
Ensembl chr17:9,282,675...9,344,678
JBrowse link
G Macroh2a2 macroH2A.2 histone IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:31,352,924...31,402,483
Ensembl chr20:31,352,960...31,402,483
JBrowse link
G Mbtd1 mbt domain containing 1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:81,588,233...81,645,532
Ensembl chr10:81,592,114...81,642,663
JBrowse link
G Mos MOS proto-oncogene, serine/threonine kinase ISS
ISO
IEA
GO_REF:0000024
(MGI:MGI:80462|PMID:8631259)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:8631259 GO_REF:0000024, GO_REF:0000107, MGI:MGI:80462 NCBI chr 5:16,746,085...16,747,392
Ensembl chr 5:16,746,197...16,747,222
JBrowse link
G Mtf2 metal response element binding transcription factor 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:2,656,776...2,701,027
Ensembl chr14:2,658,267...2,700,977
JBrowse link
G Ncor1 nuclear receptor co-repressor 1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:48,629,121...48,772,890
Ensembl chr10:48,629,121...48,772,890
JBrowse link
G NEWGENE_1306210 spindlin 1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:14,078,821...14,103,338
Ensembl chr16:884,861...930,527
JBrowse link
G Nucks1 nuclear casein kinase and cyclin-dependent kinase substrate 1 ISO (MGI:MGI:5576396|PMID:24931609), (MGI:MGI:5695791|PMID:26205492) RGD PMID:24931609, PMID:26205492 MGI:MGI:5576396, MGI:MGI:5695791 NCBI chr13:48,679,726...48,709,663
Ensembl chr13:48,679,774...48,705,575
JBrowse link
G Padi4 peptidyl arginine deiminase 4 ISO
ISS
(MGI:MGI:5545819|PMID:24463520)
GO_REF:0000024
RGD
UniProt
PMID:24463520 GO_REF:0000024, MGI:MGI:5545819 NCBI chr 5:159,260,675...159,293,906
Ensembl chr 5:159,260,675...159,293,673
JBrowse link
G Phf1 PHD finger protein 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:5,526,926...5,531,940
Ensembl chr20:5,526,961...5,531,941
JBrowse link
G Phf19 PHD finger protein 19 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:13,957,136...13,978,283
Ensembl chr 3:13,957,136...13,978,224
JBrowse link
G Pwwp3a PWWP domain containing 3A, DNA repair factor ISO
IBA
ISS
(PMID:20347427)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:20347427, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 7:12,331,288...12,348,263
Ensembl chr 7:12,331,416...12,346,475
JBrowse link
G Rb1 RB transcriptional corepressor 1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr15:55,081,582...55,209,060
Ensembl chr15:55,083,140...55,209,342
JBrowse link
G Rbbp7 RB binding protein 7, chromatin remodeling factor IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:33,648,682...33,665,821
Ensembl chr  X:33,648,682...33,665,821
JBrowse link
G Rbl1 RB transcriptional corepressor like 1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:153,263,692...153,321,351
Ensembl chr 3:153,263,692...153,321,352
JBrowse link
G Rbl2 RB transcriptional corepressor like 2 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr19:17,300,088...17,346,865
Ensembl chr19:17,300,089...17,346,808
JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit ISO (MGI:MGI:6161518|PMID:29813070) RGD PMID:29813070 MGI:MGI:6161518 NCBI chr 1:220,992,770...221,003,249
Ensembl chr 1:220,992,770...221,003,249
JBrowse link
G RGD1310212 similar to KIAA1111-like protein IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:15,360,000...15,366,120
Ensembl chr 7:15,360,700...15,364,203
JBrowse link
G RGD1562306 similar to H2A histone family, member Z IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:11,859,622...11,860,016 JBrowse link
G Satb1 SATB homeobox 1 ISO (MGI:MGI:2658695|PMID:12692553) RGD PMID:12692553 MGI:MGI:2658695 NCBI chr 9:2,181,135...2,277,949
Ensembl chr 9:2,190,915...2,274,629
JBrowse link
G Sfmbt1 Scm-like with four mbt domains 1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr16:6,775,648...6,896,155
Ensembl chr16:6,779,281...6,895,299
JBrowse link
G Sirt1 sirtuin 1 ISO (PMID:22956909) RGD PMID:22956909 NCBI chr20:26,831,971...26,851,587
Ensembl chr20:26,833,357...26,852,199
JBrowse link
G Spin1 spindlin 1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr16:884,854...930,527
Ensembl chr16:884,861...930,527
JBrowse link
G Ss18l1 SS18L1 subunit of BAF chromatin remodeling complex IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:175,426,754...175,445,222
Ensembl chr 3:175,426,752...175,445,222
JBrowse link
G Supt4h1 SPT4 homolog, DSIF elongation factor subunit IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:75,032,365...75,038,547
Ensembl chr10:75,032,365...75,038,547
JBrowse link
G Tdrd3 tudor domain containing 3 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr15:70,732,164...70,864,855
Ensembl chr15:70,790,125...70,859,185
JBrowse link
G Trim28 tripartite motif-containing 28 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:65,544,369...65,551,043
Ensembl chr 1:65,544,373...65,551,043
JBrowse link
G Utp3 UTP3, small subunit processome component IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr14:21,153,998...21,155,652
Ensembl chr14:21,154,000...21,155,652
JBrowse link
G Zbtb7a zinc finger and BTB domain containing 7a ISO (MGI:MGI:6161518|PMID:29813070) RGD PMID:29813070 MGI:MGI:6161518 NCBI chr 7:11,429,266...11,446,119
Ensembl chr 7:11,432,049...11,444,786
JBrowse link
G Zfp462 zinc finger protein 462 ISO (MGI:MGI:4440672|PMID:20219459) RGD PMID:20219459 MGI:MGI:4440672 NCBI chr 5:71,679,841...71,824,077
Ensembl chr 5:71,742,911...71,823,139
JBrowse link
G Zmpste24 zinc metallopeptidase STE24 ISO MGI:MGI:2180033 (MGI:MGI:3789238|PMID:16079796) RGD PMID:16079796 MGI:MGI:3789238 NCBI chr 5:139,982,404...140,015,541
Ensembl chr 5:139,983,680...140,015,541
JBrowse link
chromatin remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07007744.2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 2:26,869,828...26,870,421 JBrowse link
G AABR07009373.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 2:94,902,666...94,903,226 JBrowse link
G AABR07015743.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr14:73,674,753...73,675,382 JBrowse link
G AABR07019870.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr13:5,480,150...5,480,629 JBrowse link
G AABR07025074.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr16:27,472,051...27,472,687 JBrowse link
G AABR07025089.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr16:28,072,014...28,166,296 JBrowse link
G AABR07029613.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr10:40,994,237...40,994,872 JBrowse link
G AABR07030543.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr10:92,769,031...92,771,911 JBrowse link
G AABR07035218.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr12:7,081,895...7,094,002 JBrowse link
G AABR07040430.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr  X:100,206,243...100,207,974 JBrowse link
G AABR07040480.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr  X:102,031,984...102,039,530 JBrowse link
G AABR07041089.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr  X:118,996,333...118,998,300 JBrowse link
G AABR07041586.2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr  X:134,020,900...134,021,502 JBrowse link
G AABR07054355.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 3:149,741,312...149,741,953 JBrowse link
G AABR07054358.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 3:149,790,856...149,791,497 JBrowse link
G AABR07055527.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 7:4,951,747...4,952,584 JBrowse link
G AABR07060165.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 4:60,547,401...60,548,021 JBrowse link
G AABR07060287.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 4:66,091,641...66,092,259 JBrowse link
G AABR07067274.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 9:37,593,032...37,593,603 JBrowse link
G AC094217.2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 1:31,436,712...31,437,203 JBrowse link
G AC108595.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 7:132,983,472...132,984,110 JBrowse link
G Actl6a actin-like 6A ISO (PMID:11726552)
(MGI:MGI:1314932|PMID:9845365)
RGD PMID:9845365, PMID:11726552 MGI:MGI:1314932 NCBI chr 2:119,112,776...119,128,870
Ensembl chr 2:119,112,513...119,129,751
JBrowse link
G Actl6b actin-like 6B ISO (PMID:11726552) RGD PMID:11726552 NCBI chr12:22,194,595...22,211,107
Ensembl chr12:22,194,618...22,211,080
JBrowse link
G Arid1a AT-rich interaction domain 1A ISO (PMID:11726552)
MGI:MGI:3796520 (MGI:MGI:3789431|PMID:18448678)
RGD PMID:11726552, PMID:18448678 MGI:MGI:3789431 NCBI chr 5:151,904,687...151,977,973
Ensembl chr 5:151,904,684...151,977,636
JBrowse link
G Atrx ATRX, chromatin remodeler IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:20651253)
Ensembl
UniProt
RGD
PMID:20651253 GO_REF:0000024, GO_REF:0000107 NCBI chr  X:76,820,110...76,979,155
Ensembl chr  X:76,692,970...76,708,878
Ensembl chr  X:76,692,970...76,708,878
JBrowse link
G Baz1a bromodomain adjacent to zinc finger domain, 1A IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 6:75,793,223...75,873,854
Ensembl chr 6:75,793,960...75,874,235
JBrowse link
G Baz1b bromodomain adjacent to zinc finger domain, 1B ISO (MGI:MGI:2179578|PMID:11980720) RGD PMID:11980720 MGI:MGI:2179578 NCBI chr12:24,478,882...24,536,851
Ensembl chr12:24,478,898...24,537,313
JBrowse link
G Baz2a bromodomain adjacent to zinc finger domain, 2A ISO MGI:MGI:1935129 (MGI:MGI:2149896|PMID:11532953) RGD PMID:11532953 MGI:MGI:2149896 NCBI chr 7:2,518,267...2,548,840
Ensembl chr 7:2,529,077...2,547,062
JBrowse link
G Bptf bromodomain PHD finger transcription factor ISO (PMID:14609955) RGD PMID:14609955 NCBI chr10:95,248,573...95,350,162
Ensembl chr10:95,250,294...95,349,789
JBrowse link
G Brd4 bromodomain containing 4 ISO (PMID:23728299) RGD PMID:23728299 NCBI chr 7:14,222,101...14,303,055
Ensembl chr 7:14,222,101...14,303,055
JBrowse link
G Brdt bromodomain testis associated IDA
IEA
ISO
GO_REF:0000107
(MGI:MGI:2668282|PMID:12861021), (MGI:MGI:5430881|PMID:19794495)
Ensembl
RGD
PMID:12861021, PMID:19794495, PMID:22215678 GO_REF:0000107, MGI:MGI:2668282, MGI:MGI:5430881, RGD:9586361 NCBI chr14:3,437,876...3,462,613
Ensembl chr14:3,405,995...3,462,629
JBrowse link
G Chd1 chromodomain helicase DNA binding protein 1 ISO MGI:MGI:1316736 (MGI:MGI:3616364|PMID:16415155) RGD PMID:16415155 MGI:MGI:3616364 NCBI chr 1:57,692,828...57,756,762
Ensembl chr 1:57,692,836...57,755,485
JBrowse link
G Chd1l chromodomain helicase DNA binding protein 1-like ISO
IBA
(PMID:19661379)
PMID:21873635
RGD PMID:19661379, PMID:21873635 RGD:13792537 NCBI chr 2:199,714,044...199,792,270
Ensembl chr 2:199,716,713...199,771,896
JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 ISO MGI:MGI:2176467|MGI:MGI:4433295 (MGI:MGI:5694290|PMID:26102480) RGD PMID:26102480 MGI:MGI:5694290 NCBI chr 5:21,769,087...21,952,036
Ensembl chr 5:21,830,882...21,950,696
JBrowse link
G Daxx death-domain associated protein ISO
IEA
(PMID:20651253)
GO_REF:0000107
RGD
Ensembl
PMID:20651253 GO_REF:0000107 NCBI chr20:5,480,103...5,485,962
Ensembl chr20:5,480,103...5,485,926
JBrowse link
G Dr1 down-regulator of transcription 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:2,463,651...2,475,004
Ensembl chr14:2,463,643...2,474,780
JBrowse link
G Ezh1 enhancer of zeste 1 polycomb repressive complex 2 subunit ISO (MGI:MGI:3820717|PMID:19026781) RGD PMID:19026781 MGI:MGI:3820717 NCBI chr10:89,104,026...89,139,978
Ensembl chr10:89,104,027...89,130,339
JBrowse link
G Foxa1 forkhead box A1 ISO
IEA
(MGI:MGI:4456944|PMID:15748903)
GO_REF:0000107
RGD
Ensembl
PMID:15748903 GO_REF:0000107, MGI:MGI:4456944 NCBI chr 6:78,516,579...78,549,669
Ensembl chr 6:78,545,804...78,549,669
JBrowse link
G Gata3 GATA binding protein 3 ISO (MGI:MGI:3046385|PMID:15087456) RGD PMID:15087456 MGI:MGI:3046385 NCBI chr17:72,419,752...72,452,043
Ensembl chr17:72,429,618...72,450,681
JBrowse link
G Gatad1 GATA zinc finger domain containing 1 ISO (PMID:20850016) RGD PMID:20850016 NCBI chr 4:27,647,005...27,658,533
Ensembl chr 4:27,647,335...27,657,167
JBrowse link
G Hcfc1 host cell factor C1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:156,812,012...156,837,227
Ensembl chr  X:156,812,064...156,837,227
JBrowse link
G Hcfc2 host cell factor C2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:27,107,931...27,136,658
Ensembl chr 7:27,108,116...27,136,652
JBrowse link
G Hdac4 histone deacetylase 4 ISO (PMID:18850004) RGD PMID:18850004 NCBI chr 9:99,052,945...99,299,715
Ensembl chr 9:99,057,089...99,299,715
JBrowse link
G Hmg1l1 high-mobility group (nonhistone chromosomal) protein 1-like 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:59,984,234...59,985,494
Ensembl chr19:59,984,234...59,985,494
JBrowse link
G Hmgb1 high mobility group box 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:7,082,529...7,090,246
Ensembl chr16:37,500,017...37,502,237
JBrowse link
G Hmgb1-ps3 high mobility group box 1, pseudogene 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:132,982,959...132,984,167 JBrowse link
G Hmgb2 high mobility group box 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:36,077,615...36,080,191
Ensembl chr16:36,077,617...36,080,191
Ensembl chr11:36,077,617...36,080,191
JBrowse link
G Hmgb2l1 high mobility group box 2-like 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:49,708,038...49,709,128
Ensembl chr16:36,077,617...36,080,191
Ensembl chr11:36,077,617...36,080,191
JBrowse link
G Hmgb3 high mobility group box 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:36,690,190...36,694,329
Ensembl chr17:36,690,249...36,694,325
Ensembl chr14:36,690,249...36,694,325
JBrowse link
G Hmgb4 high-mobility group box 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:146,445,545...146,446,227
Ensembl chr 5:146,445,545...146,446,227
JBrowse link
G Hnf1a HNF1 homeobox A ISO MGI:MGI:2154359 (MGI:MGI:2388420|PMID:12367519), (MGI:MGI:3699537|PMID:11733582) RGD PMID:11733582, PMID:12367519 MGI:MGI:2388420, MGI:MGI:3699537 NCBI chr12:47,407,811...47,433,342
Ensembl chr12:47,407,811...47,433,342
JBrowse link
G Ino80 INO80 complex ATPase subunit IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:111,186,371...111,266,542
Ensembl chr 3:111,187,711...111,266,542
JBrowse link
G Ino80c INO80 complex subunit C IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:15,995,005...16,009,639
Ensembl chr18:15,995,000...16,009,710
JBrowse link
G Ino80e INO80 complex subunit E IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:198,287,489...198,298,076
Ensembl chr 1:198,287,490...198,298,076
JBrowse link
G Jarid2 jumonji and AT-rich interaction domain containing 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:20,183,440...20,365,219
Ensembl chr17:20,184,245...20,364,714
JBrowse link
G Kat2b lysine acetyltransferase 2B ISO (PMID:17707232) RGD PMID:17707232 NCBI chr 9:4,440,982...4,492,949 JBrowse link
G Kdm4a lysine demethylase 4A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:136,967,650...137,014,402
Ensembl chr 5:136,967,650...137,014,430
JBrowse link
G Kdm4b lysine demethylase 4B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:10,656,035...10,734,127
Ensembl chr 9:10,653,216...10,734,073
JBrowse link
G Kdm4c lysine demethylase 4C IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:90,800,139...91,012,662
Ensembl chr 5:90,800,082...91,012,659
JBrowse link
G Kdm4d lysine demethylase 4D IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:12,968,192...12,993,651
Ensembl chr 8:13,511,805...13,513,337
JBrowse link
G Kdm5a lysine demethylase 5A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:152,892,388...152,972,196
Ensembl chr 4:152,892,388...152,972,201
JBrowse link
G Kdm5b lysine demethylase 5B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:51,384,371...51,455,392
Ensembl chr13:51,384,389...51,455,357
JBrowse link
G Kdm5c lysine demethylase 5C IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:22,302,664...22,349,298
Ensembl chr  X:22,302,485...22,348,627
JBrowse link
G Kdm5d lysine demethylase 5D IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  Y:501,058...589,267
Ensembl chr  Y:505,996...589,267
JBrowse link
G Kdm6a lysine demethylase 6A ISO (MGI:MGI:4866963|PMID:21095589) RGD PMID:21095589 MGI:MGI:4866963 NCBI chr  X:4,805,493...4,945,788
Ensembl chr  X:4,806,277...4,945,944
JBrowse link
G Kdm6b lysine demethylase 6B ISO (MGI:MGI:4866963|PMID:21095589) RGD PMID:21095589 MGI:MGI:4866963 NCBI chr10:56,000,494...56,009,582
Ensembl chr10:56,001,799...56,008,885
JBrowse link
G Klf1 Kruppel like factor 1 ISO (MGI:MGI:3056025|PMID:15489291) RGD PMID:15489291 MGI:MGI:3056025 NCBI chr19:26,016,289...26,019,557
Ensembl chr19:26,016,382...26,019,553
JBrowse link
G LOC100910207 protein Dr1-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:1,621,021...1,632,432
Ensembl chr14:1,621,026...1,632,378
JBrowse link
G LOC100911637 high mobility group protein B1-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:149,741,055...149,741,953 JBrowse link
G LOC102548927 high mobility group protein B4-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:53,234,043...53,235,377
Ensembl chr  X:53,233,469...53,235,286
JBrowse link
G LOC103694516 high mobility group protein B4-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:134,389,281...134,389,978
Ensembl chr  X:134,389,417...134,389,911
JBrowse link
G LOC103694517 high mobility group protein B4-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:139,329,414...139,330,120
Ensembl chr  X:139,329,481...139,329,975
JBrowse link
G LOC108348070 lysine-specific demethylase 4D IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:13,511,349...13,513,661
Ensembl chr 8:12,968,193...12,993,651
Ensembl chr 8:12,968,193...12,993,651
JBrowse link
G LOC108349189 high mobility group protein B1 pseudogene IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:115,351,012...115,351,755
Ensembl chr  X:115,351,114...115,351,755
JBrowse link
G LOC108349258 high mobility group protein B4-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:142,344,626...142,345,439
Ensembl chr  X:142,344,878...142,345,372
JBrowse link
G LOC108350839 high mobility group protein B1-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:92,431,517...92,432,354
Ensembl chr 4:92,431,710...92,432,354
JBrowse link
G LOC681067 similar to RIKEN cDNA 1700001F22 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:132,424,185...132,424,955
Ensembl chr  X:132,424,240...132,424,746
JBrowse link
G LOC688583 similar to High mobility group protein 4 (HMG-4) (High mobility group protein 2a) (HMG-2a) IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:51,458,436...51,462,755
Ensembl chr17:36,690,249...36,694,325
Ensembl chr14:36,690,249...36,694,325
JBrowse link
G LOC690521 similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30) IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:149,790,599...149,791,497 JBrowse link
G LOC691030 similar to RIKEN cDNA 1700001F22 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:130,794,079...130,794,824
Ensembl chr  X:130,794,167...130,794,673
JBrowse link
G Men1 menin 1 ISO MGI:MGI:2158698|MGI:MGI:88393 (MGI:MGI:3616131|PMID:15044367), (MGI:MGI:3616364|PMID:16415155) RGD PMID:15044367, PMID:16415155 MGI:MGI:3616131, MGI:MGI:3616364 NCBI chr 1:221,704,394...221,710,343
Ensembl chr 1:221,704,493...221,710,331
JBrowse link
G Morc2 MORC family CW-type zinc finger 2 ISO (PMID:23260667) RGD PMID:23260667 NCBI chr14:83,889,138...83,930,263
Ensembl chr14:83,889,089...83,930,522
JBrowse link
G Mpnd MPN domain containing IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:11,055,370...11,061,611
Ensembl chr 9:11,055,371...11,061,611
JBrowse link
G Myb MYB proto-oncogene, transcription factor ISO (PMID:20484083) RGD PMID:20484083 NCBI chr 1:16,658,178...16,690,135
Ensembl chr 1:16,659,442...16,687,817
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor ISO
ISS
(PMID:21533051)
GO_REF:0000024
RGD
UniProt
PMID:21533051 GO_REF:0000024 NCBI chr 7:102,586,313...102,591,240
Ensembl chr 7:102,586,313...102,591,240
JBrowse link
G Mysm1 myb-like, SWIRM and MPN domains 1 ISO
IBA
(PMID:17707232)
PMID:21873635
RGD PMID:17707232, PMID:21873635 RGD:13792537 NCBI chr 5:113,902,115...113,939,083
Ensembl chr 5:113,906,803...113,939,127
JBrowse link
G Npm1 nucleophosmin 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:18,080,949...18,091,062
Ensembl chr10:18,080,950...18,090,950
JBrowse link
G Npm2 nucleophosmin/nucleoplasmin 2 ISO
IBA
MGI:MGI:2182141 (MGI:MGI:2662932|PMID:12714744)
PMID:21873635
(PMID:12714744)
RGD PMID:12714744, PMID:21873635 MGI:MGI:2662932, RGD:13792537 NCBI chr15:52,337,457...52,345,849
Ensembl chr15:52,337,528...52,344,629
JBrowse link
G Npm3 nucleophosmin/nucleoplasmin, 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:265,504,105...265,506,080
Ensembl chr 1:265,504,575...265,506,046
JBrowse link
G Nr3c1 nuclear receptor subfamily 3, group C, member 1 IMP PMID:12917342 UniProt PMID:12917342 RGD:8553888 NCBI chr18:31,728,373...32,704,022
Ensembl chr18:31,728,373...31,749,647
JBrowse link
G Nudt5 nudix hydrolase 5 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:27257257)
Ensembl
UniProt
RGD
PMID:27257257 GO_REF:0000024, GO_REF:0000107 NCBI chr17:76,387,027...76,410,309
Ensembl chr17:76,387,031...76,410,294
JBrowse link
G Pabpc1l poly(A) binding protein, cytoplasmic 1-like ISO MGI:MGI:5437740 (MGI:MGI:5688228|PMID:26134869) RGD PMID:26134869 MGI:MGI:5688228 NCBI chr 3:160,410,733...160,447,073
Ensembl chr 3:160,410,757...160,444,940
JBrowse link
G Padi4 peptidyl arginine deiminase 4 ISO
ISS
(MGI:MGI:5545819|PMID:24463520)
GO_REF:0000024
RGD
UniProt
PMID:24463520 GO_REF:0000024, MGI:MGI:5545819 NCBI chr 5:159,260,675...159,293,906
Ensembl chr 5:159,260,675...159,293,673
JBrowse link
G Pak1 p21 (RAC1) activated kinase 1 ISS
ISO
GO_REF:0000024
(PMID:23260667)
UniProt
RGD
PMID:23260667 GO_REF:0000024 NCBI chr 1:162,768,156...162,883,356
Ensembl chr 1:162,768,156...162,883,355
JBrowse link
G Pax7 paired box 7 ISO MGI:MGI:1857831|MGI:MGI:3047633 (MGI:MGI:5440096|PMID:23070814) RGD PMID:23070814 MGI:MGI:5440096 NCBI chr 5:158,211,001...158,313,510
Ensembl chr 5:158,214,616...158,313,426
JBrowse link
G Pih1d1 PIH1 domain containing 1 ISO (PMID:22368283) RGD PMID:22368283 NCBI chr 1:101,151,240...101,156,806
Ensembl chr 1:101,152,734...101,156,805
JBrowse link
G Rbbp4 RB binding protein 4, chromatin remodeling factor ISO (PMID:14609955) RGD PMID:14609955 NCBI chr 5:147,499,880...147,535,240
Ensembl chr 5:147,499,882...147,535,240
JBrowse link
G Rere arginine-glutamic acid dipeptide repeats ISO PR:O09106 (MGI:MGI:2683041|PMID:14645126) RGD PMID:14645126 MGI:MGI:2683041 NCBI chr 5:167,330,966...167,664,506
Ensembl chr 5:167,331,035...167,664,505
JBrowse link
G RGD1559962 similar to High mobility group protein 2 (HMG-2) IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:20,416,735...20,417,959
Ensembl chr 1:20,417,008...20,417,637
JBrowse link
G RGD1560585 similar to RIKEN cDNA 1700001F22 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:144,001,166...144,001,891
Ensembl chr  X:144,001,233...144,001,727
JBrowse link
G RGD1561558 similar to RIKEN cDNA 1700001F22 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:158,261,123...158,261,953
Ensembl chr  X:158,261,223...158,261,717
JBrowse link
G RGD1561694 similar to High mobility group protein 2 (HMG-2) IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:73,674,647...73,675,638 JBrowse link
G RGD1563668 similar to High mobility group protein 1 (HMG-1) IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:40,994,237...40,994,990 JBrowse link
G RGD1564855 similar to RuvB-like protein 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:1,854,580...1,856,333
Ensembl chr  X:1,854,751...1,856,258
JBrowse link
G RGD1565762 similar to High mobility group protein 1 (HMG-1) IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:5,480,069...5,480,782 JBrowse link
G RGD1566225 similar to RIKEN cDNA 1700001F22 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:137,197,195...137,197,990
Ensembl chr  X:137,197,396...137,197,902
JBrowse link
G Rsf1 remodeling and spacing factor 1 ISO (PMID:9836642) RGD PMID:9836642 NCBI chr 1:162,549,222...162,671,962
Ensembl chr 1:162,549,420...162,662,170
JBrowse link
G Ruvbl1 RuvB-like AAA ATPase 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:120,411,917...120,447,458
Ensembl chr 4:120,411,991...120,447,455
JBrowse link
G Ruvbl2 RuvB-like AAA ATPase 2 ISO
IBA
(PMID:23637611)
PMID:21873635
RGD PMID:23637611, PMID:21873635 RGD:13792537 NCBI chr 1:101,413,766...101,426,970
Ensembl chr 1:101,413,766...101,426,852
JBrowse link
G Satb1 SATB homeobox 1 ISO
IBA
MGI:MGI:2386676 (MGI:MGI:5295905|PMID:21930775)
PMID:21873635
RGD PMID:21930775, PMID:21873635 MGI:MGI:5295905, RGD:13792537 NCBI chr 9:2,181,135...2,277,949
Ensembl chr 9:2,190,915...2,274,629
JBrowse link
G Satb2 SATB homeobox 2 ISO
IBA
(MGI:MGI:3793380|PMID:18255031)
PMID:21873635
RGD PMID:18255031, PMID:21873635 MGI:MGI:3793380, RGD:13792537 NCBI chr 9:63,456,877...63,642,193
Ensembl chr 9:63,456,783...63,641,400
JBrowse link
G Scmh1 Scm polycomb group protein homolog 1 ISO MGI:MGI:3706668 (MGI:MGI:3703453|PMID:17215307) RGD PMID:17215307 MGI:MGI:3703453 NCBI chr 5:139,379,256...139,466,805
Ensembl chr 5:139,385,429...139,466,081
JBrowse link
G Smarca1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 ISO (PMID:14609955) RGD PMID:14609955 NCBI chr  X:134,634,651...134,719,503
Ensembl chr  X:134,647,703...134,719,097
JBrowse link
G Smarca2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 NOT ISO (PMID:22368283) RGD PMID:22368283 NCBI chr 1:244,615,811...244,783,736
Ensembl chr 1:244,615,821...244,782,706
JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 ISO MGI:MGI:3611933 (MGI:MGI:3610843|PMID:16287714)
(PMID:10943845), (PMID:11726552), (PMID:22368283)
RGD PMID:10943845, PMID:11726552, PMID:16287714, PMID:22368283 MGI:MGI:3610843 NCBI chr 8:22,648,323...22,739,468
Ensembl chr 8:22,648,323...22,739,468
JBrowse link
G Smarca5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 ISO (PMID:9836642)
MGI:MGI:2151152 (MGI:MGI:2149896|PMID:11532953), (MGI:MGI:2179578|PMID:11980720)
RGD PMID:9836642, PMID:11532953, PMID:11980720 MGI:MGI:2149896, MGI:MGI:2179578 NCBI chr19:30,936,703...30,969,454
Ensembl chr19:30,936,703...30,969,454
JBrowse link
G Smarcb1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 ISO (PMID:11726552), (PMID:22368283) RGD PMID:11726552, PMID:22368283 NCBI chr20:13,679,955...13,702,821
Ensembl chr20:13,680,716...13,704,931
JBrowse link
G Smarcc1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 ISO (PMID:10078207), (PMID:11018012), (PMID:11726552) RGD PMID:10078207, PMID:11018012, PMID:11726552 NCBI chr 8:118,206,678...118,326,264
Ensembl chr 8:118,206,698...118,325,537
JBrowse link
G Smarcc2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 ISO (PMID:10078207), (PMID:11018012), (PMID:11726552) RGD PMID:10078207, PMID:11018012, PMID:11726552 NCBI chr 7:2,875,898...2,905,463
Ensembl chr 7:2,875,909...2,904,453
JBrowse link
G Smarcd1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 ISO (PMID:11726552), (PMID:12917342) RGD PMID:11726552, PMID:12917342 NCBI chr 7:141,355,623...141,366,725
Ensembl chr 7:141,355,994...141,366,732
JBrowse link
G Smarcd2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 ISO (PMID:11726552) RGD PMID:11726552 NCBI chr10:94,451,866...94,460,732
Ensembl chr10:94,451,866...94,460,732
JBrowse link
G Smarcd3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 ISO (PMID:11726552) RGD PMID:11726552 NCBI chr 4:7,076,710...7,108,334
Ensembl chr 4:7,076,759...7,108,328
JBrowse link
G Smarce1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 ISO (PMID:11726552) RGD PMID:11726552 NCBI chr10:87,116,827...87,138,890
Ensembl chr10:87,116,827...87,137,965
JBrowse link
G Smyd1 SET and MYND domain containing 1 ISO PR:O09106 (MGI:MGI:2178868|PMID:11923873) RGD PMID:11923873 MGI:MGI:2178868 NCBI chr 4:99,071,122...99,125,143
Ensembl chr 4:99,074,535...99,125,111
JBrowse link
G Sox9 SRY-box transcription factor 9 ISO
ISS
(PMID:20484372)
GO_REF:0000024
RGD
UniProt
PMID:20484372 GO_REF:0000024 NCBI chr10:101,288,528...101,294,030
Ensembl chr10:101,288,489...101,293,379
JBrowse link
G Srcap Snf2-related CREBBP activator protein IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:198,957,764...199,007,576
Ensembl chr 1:198,960,542...199,007,347
JBrowse link
G Suv39h2 suppressor of variegation 3-9 homolog 2 ISO (PMID:10949293) RGD PMID:10949293 NCBI chr17:78,762,897...78,782,016
Ensembl chr17:78,762,991...78,782,016
JBrowse link
G Tada2a transcriptional adaptor 2A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:71,393,701...71,441,435
Ensembl chr10:71,393,692...71,441,389
JBrowse link
G Tada2b transcriptional adaptor 2B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:79,446,057...79,457,341
Ensembl chr14:79,446,057...79,457,333
JBrowse link
G Tfam transcription factor A, mitochondrial IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:18,594,057...18,606,106
Ensembl chr20:18,594,037...18,606,151
JBrowse link
G Tnp1 transition protein 1 ISO
IBA
ISS
(PMID:12743712)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:12743712, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 9:80,294,837...80,295,446
Ensembl chr 9:80,294,840...80,295,446
JBrowse link
G Top1 DNA topoisomerase I IEA
IBA
ISS
ISO
GO_REF:0000107
PMID:21873635
GO_REF:0000024
(PMID:22904072)
Ensembl
UniProt
RGD
PMID:22904072, PMID:21873635 GO_REF:0000024, GO_REF:0000107, RGD:13792537 NCBI chr 3:156,635,688...156,717,686
Ensembl chr 3:156,642,464...156,717,686
JBrowse link
G Tp63 tumor protein p63 ISO MGI:MGI:1934580 (MGI:MGI:5295905|PMID:21930775) RGD PMID:21930775 MGI:MGI:5295905 NCBI chr11:78,234,853...78,456,559
Ensembl chr11:78,234,800...78,456,501
JBrowse link
G Ttf1 transcription termination factor 1 ISO (MGI:MGI:85982|PMID:9049305) RGD PMID:9049305 MGI:MGI:85982 NCBI chr 3:7,635,630...7,660,153
Ensembl chr 3:7,635,933...7,660,673
JBrowse link
G Zbtb1 zinc finger and BTB domain containing 1 ISO (PMID:24657165) RGD PMID:24657165 NCBI chr 6:99,401,775...99,425,739
Ensembl chr 6:99,402,360...99,424,019
JBrowse link
G Zbtb7a zinc finger and BTB domain containing 7a ISS
ISO
IEA
GO_REF:0000024
(PMID:26816381)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:26816381 GO_REF:0000024, GO_REF:0000107 NCBI chr 7:11,429,266...11,446,119
Ensembl chr 7:11,432,049...11,444,786
JBrowse link
chromatin silencing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07062859.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 6:11,859,630...11,860,001 JBrowse link
G Bmi1 BMI1 proto-oncogene, polycomb ring finger IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:85,360,439...85,370,283
Ensembl chr17:85,364,483...85,368,208
JBrowse link
G Ctbp1 C-terminal binding protein 1 IEA
ISO
GO_REF:0000107
(PMID:21102443)
Ensembl
RGD
PMID:21102443 GO_REF:0000107 NCBI chr14:82,762,109...82,789,350
Ensembl chr14:82,762,190...82,789,319
JBrowse link
G Eed embryonic ectoderm development IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:154,189,252...154,216,340
Ensembl chr 1:154,189,260...154,216,340
JBrowse link
G H1f0 H1 histone family, member 0 ISO UniProtKB:P09429 (PMID:19158276) RGD PMID:19158276 NCBI chr 7:120,260,776...120,262,636 JBrowse link
G H2ac1 H2A clustered histone 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:43,422,454...43,422,846
Ensembl chr17:43,422,454...43,422,846
JBrowse link
G H2ac12 H2A clustered histone 12 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:44,527,990...44,528,557
Ensembl chr17:44,528,125...44,528,511
JBrowse link
G H2ac20 H2A clustered histone 20 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:198,360,271...198,360,735
Ensembl chr 2:198,360,301...198,360,678
JBrowse link
G H2ac21 H2A clustered histone 21 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:198,359,754...198,360,146
Ensembl chr 2:198,359,754...198,360,146
JBrowse link
G H2afb3 H2A histone family, member B3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:88,602,135...88,602,485
Ensembl chr  X:88,602,135...88,602,485
JBrowse link
G H2aj H2A.J histone IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:170,766,900...170,767,384
Ensembl chr 4:170,766,900...170,767,382
JBrowse link
G H2ax H2A.X variant histone IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:48,665,652...48,666,981
Ensembl chr 8:48,665,652...48,666,981
JBrowse link
G H2az1 H2A.Z variant histone 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:243,105,224...243,107,333
Ensembl chr 2:243,105,674...243,106,956
JBrowse link
G H2az2 H2A.Z variant histone 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:86,687,782...86,706,639
Ensembl chr14:86,687,782...86,706,626
JBrowse link
G Hells helicase, lymphoid specific ISO MGI:MGI:2178586 (MGI:MGI:3510059|PMID:15448183) RGD PMID:15448183 MGI:MGI:3510059 NCBI chr 1:257,901,856...257,953,889
Ensembl chr 1:257,766,691...257,949,183
Ensembl chr 1:257,766,691...257,949,183
JBrowse link
G Hils1 histone linker H1 domain, spermatid-specific 1 ISO (PMID:12920187) RGD PMID:12920187 NCBI chr10:82,775,691...82,776,487
Ensembl chr10:82,775,691...82,776,487
JBrowse link
G Hist1h2ac histone cluster 1 H2A family member C IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:44,520,484...44,521,142
Ensembl chr17:44,520,537...44,520,929
Ensembl chr17:44,520,537...44,520,929
Ensembl chr17:44,520,537...44,520,929
JBrowse link
G Hist1h2af histone cluster 1 H2A family member F IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:43,627,237...43,627,629
Ensembl chr17:43,627,237...43,627,629
JBrowse link
G Hist1h2ah histone cluster 1 H2A family member H IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:43,632,354...43,632,851
Ensembl chr17:44,747,796...44,748,188
Ensembl chr17:44,747,796...44,748,188
JBrowse link
G Hist1h2ai histone cluster 1, H2ai IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:44,758,412...44,759,675
Ensembl chr17:44,520,537...44,520,929
Ensembl chr17:44,520,537...44,520,929
Ensembl chr17:44,520,537...44,520,929
JBrowse link
G hist1h2ail2 histone cluster 1, H2ai-like2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:44,794,087...44,794,563
Ensembl chr17:44,520,537...44,520,929
Ensembl chr17:44,520,537...44,520,929
Ensembl chr17:44,520,537...44,520,929
JBrowse link
G Hist1h2ak histone cluster 1, H2ak IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:44,840,990...44,841,382
Ensembl chr17:44,840,990...44,841,382
JBrowse link
G Hist1h2an histone cluster 1, H2an IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:43,779,174...43,779,775
Ensembl chr17:44,520,537...44,520,929
Ensembl chr17:44,520,537...44,520,929
Ensembl chr17:44,520,537...44,520,929
Ensembl chr17:44,520,537...44,520,929
JBrowse link
G Hist1h2ao histone cluster 1, H2ao IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:44,744,534...44,744,931
Ensembl chr17:43,770,250...43,770,561
Ensembl chr17:43,770,250...43,770,561
Ensembl chr17:43,770,250...43,770,561
Ensembl chr17:43,770,250...43,770,561
Ensembl chr 2:43,770,250...43,770,561
Ensembl chr17:43,770,250...43,770,561
Ensembl chr17:43,770,250...43,770,561
Ensembl chr17:43,770,250...43,770,561
Ensembl chr 4:43,770,250...43,770,561
Ensembl chr 4:43,770,250...43,770,561
Ensembl chr 4:43,770,250...43,770,561
Ensembl chr 4:43,770,250...43,770,561
JBrowse link
G Hist2h2aa2 histone cluster 2 H2A family member A2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:198,381,678...198,382,247
Ensembl chr 2:198,388,809...198,389,201
Ensembl chr 2:198,388,809...198,389,201
JBrowse link
G Hist2h2aa3 histone cluster 2 H2A family member A3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:198,388,766...198,389,293
Ensembl chr 2:198,388,809...198,389,201
Ensembl chr 2:198,388,809...198,389,201
JBrowse link
G Hist3h2a histone cluster 3, H2a IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:45,297,603...45,299,155 JBrowse link
G Hmgb1 high mobility group box 1 ISO UniProtKB:P07305 (PMID:19158276) RGD PMID:19158276 NCBI chr12:7,082,529...7,090,246
Ensembl chr16:37,500,017...37,502,237
JBrowse link
G Hypm huntingtin interacting protein M IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:13,989,401...13,989,955
Ensembl chr  X:13,989,401...13,989,955
JBrowse link
G Kdm1a lysine demethylase 1A ISO (MGI:MGI:4461095|PMID:20123967) RGD PMID:20123967 MGI:MGI:4461095 NCBI chr 5:154,909,003...154,965,171
Ensembl chr 5:154,909,003...154,965,171
JBrowse link
G Kmt2d lysine methyltransferase 2D ISO (MGI:MGI:4849597|PMID:20808952) RGD PMID:20808952 MGI:MGI:4849597 NCBI chr 7:140,507,137...140,542,479
Ensembl chr 7:140,489,492...140,546,908
JBrowse link
G LOC100363125 rCG42854-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:13,991,860...13,992,606
Ensembl chr  X:13,992,064...13,992,429
JBrowse link
G LOC100910554 histone H2A type 1-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:44,738,552...44,739,195
Ensembl chr17:44,738,643...44,739,035
JBrowse link
G LOC103690002 histone H2A.J IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:170,148,955...170,149,479
Ensembl chr 4:170,149,029...170,149,418
JBrowse link
G LOC103690190 histone H2A type 1-E IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:44,747,686...44,748,229
Ensembl chr17:44,747,796...44,748,188
Ensembl chr17:44,747,796...44,748,188
JBrowse link
G LOC103692167 polycomb group RING finger protein 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:114,776,680...114,779,447
Ensembl chr 4:114,776,797...114,779,446
JBrowse link
G LOC680063 similar to histone 2a IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G LOC684773 similar to histone 2a IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:43,777,353...43,777,827
Ensembl chr17:44,520,537...44,520,929
Ensembl chr17:44,520,537...44,520,929
Ensembl chr17:44,520,537...44,520,929
JBrowse link
G Macroh2a1 macroH2A.1 histone IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:9,282,109...9,344,698
Ensembl chr17:9,282,675...9,344,678
JBrowse link
G Macroh2a2 macroH2A.2 histone IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:31,352,924...31,402,483
Ensembl chr20:31,352,960...31,402,483
JBrowse link
G Mecp2 methyl CpG binding protein 2 ISO MGI:MGI:2137311 (MGI:MGI:3530434|PMID:15608638) RGD PMID:15608638 MGI:MGI:3530434 NCBI chr  X:156,650,389...156,713,813
Ensembl chr  X:156,655,960...156,705,233
JBrowse link
G Morf4l1 mortality factor 4 like 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:97,473,454...97,494,974
Ensembl chr 8:97,474,092...97,494,834
JBrowse link
G Morf4l2 mortality factor 4 like 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:107,394,468...107,405,564
Ensembl chr  X:107,394,486...107,405,564
JBrowse link
G Msl3 MSL complex subunit 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:27,015,826...27,033,562
Ensembl chr  X:27,015,884...27,033,555
JBrowse link
G Msl3l2 male-specific lethal 3-like 2 (Drosophila) IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:37,580,002...37,590,015
Ensembl chr20:37,587,687...37,589,198
JBrowse link
G Pcgf1 polycomb group ring finger 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:113,911,129...113,913,718
Ensembl chr 4:113,910,685...113,913,687
JBrowse link
G Pcgf2 polycomb group ring finger 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:85,631,829...85,642,591
Ensembl chr10:85,632,819...85,636,902
JBrowse link
G Ppm1d protein phosphatase, Mg2+/Mn2+ dependent, 1D ISO (MGI:MGI:5551345|PMID:24135283) RGD PMID:24135283 MGI:MGI:5551345 NCBI chr10:72,909,550...72,945,884
Ensembl chr10:72,909,550...72,945,884
JBrowse link
G RGD1562306 similar to H2A histone family, member Z IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:11,859,622...11,860,016 JBrowse link
G RGD1562871 similar to BMI1-like protein IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:79,546,624...79,547,767
Ensembl chr  X:79,546,624...79,547,767
JBrowse link
G Tnp1 transition protein 1 ISO
ISS
(PMID:11315969)
GO_REF:0000024
RGD
UniProt
PMID:11315969 GO_REF:0000024 NCBI chr 9:80,294,837...80,295,446
Ensembl chr 9:80,294,840...80,295,446
JBrowse link
G Ubr2 ubiquitin protein ligase E3 component n-recognin 2 ISO
IBA
(MGI:MGI:4431162|PMID:20080676)
PMID:21873635
RGD PMID:20080676, PMID:21873635 MGI:MGI:4431162, RGD:13792537 NCBI chr 9:16,003,058...16,080,152
Ensembl chr 9:16,003,058...16,080,152
JBrowse link
chromatin silencing at telomere term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dot1l DOT1 like histone lysine methyltransferase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:11,786,105...11,824,742
Ensembl chr 7:11,786,105...11,824,742
JBrowse link
G Dpy30 dpy-30 histone methyltransferase complex regulatory subunit IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:22,296,128...22,316,894
Ensembl chr 6:22,296,128...22,316,894
JBrowse link
G Dydc1 DPY30 domain containing 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:18,648,030...18,667,962
Ensembl chr16:18,648,866...18,667,968
JBrowse link
G Dydc2 DPY30 domain containing 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:18,635,235...18,649,074
Ensembl chr16:18,635,388...18,645,941
JBrowse link
G Ezh1 enhancer of zeste 1 polycomb repressive complex 2 subunit ISO UniProtKB:P38827 (MGI:MGI:892875|PMID:9214638) RGD PMID:9214638 MGI:MGI:892875 NCBI chr10:89,104,026...89,139,978
Ensembl chr10:89,104,027...89,130,339
JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit ISO UniProtKB:P38827 (PMID:9214638) RGD PMID:9214638 NCBI chr 4:77,284,404...77,347,011
Ensembl chr 4:77,284,404...77,347,011
JBrowse link
G Hat1 histone acetyltransferase 1 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:58,022,395...58,070,067
Ensembl chr 3:58,022,238...58,070,068
JBrowse link
G Rif1 replication timing regulatory factor 1 ISO (MGI:MGI:5584328|PMID:24735877) RGD PMID:24735877 MGI:MGI:5584328 NCBI chr 3:37,599,540...37,648,818
Ensembl chr 3:37,599,728...37,647,631
JBrowse link
chromatin-mediated maintenance of transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdca4 cell division cycle associated 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:137,396,133...137,421,283
Ensembl chr 6:137,396,140...137,421,283
JBrowse link
G Chek1 checkpoint kinase 1 ISO
ISS
(MGI:MGI:5294291|PMID:18243098)
GO_REF:0000024
RGD
UniProt
PMID:18243098 GO_REF:0000024, MGI:MGI:5294291 NCBI chr 8:39,181,162...39,201,588
Ensembl chr 8:39,181,163...39,243,882
JBrowse link
G Ctnnb1 catenin beta 1 ISO
IEA
(MGI:MGI:5428344|PMID:22723415)
GO_REF:0000107
RGD
Ensembl
PMID:22723415 GO_REF:0000107, MGI:MGI:5428344 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Elof1 elongation factor 1 homolog IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:23,125,987...23,130,980
Ensembl chr 8:23,125,988...23,130,877
JBrowse link
G LOC103693776 zinc finger MIZ domain-containing protein 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:86,514,157...86,530,701
Ensembl chr14:86,514,214...86,530,701
JBrowse link
G Nr3c1 nuclear receptor subfamily 3, group C, member 1 IMP PMID:12917342 UniProt PMID:12917342 RGD:8553888 NCBI chr18:31,728,373...32,704,022
Ensembl chr18:31,728,373...31,749,647
JBrowse link
G Pabpc1l poly(A) binding protein, cytoplasmic 1-like ISO MGI:MGI:5437740 (MGI:MGI:5688228|PMID:26134869) RGD PMID:26134869 MGI:MGI:5688228 NCBI chr 3:160,410,733...160,447,073
Ensembl chr 3:160,410,757...160,444,940
JBrowse link
G Padi2 peptidyl arginine deiminase 2 IEA
ISO
GO_REF:0000107
(PMID:22853951)
Ensembl
RGD
PMID:22853951 GO_REF:0000107 NCBI chr 5:159,428,479...159,471,113
Ensembl chr 5:159,428,515...159,471,144
JBrowse link
G Sertad1 SERTA domain containing 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:84,293,102...84,296,370
Ensembl chr 1:84,293,102...84,296,367
JBrowse link
G Sertad2 SERTA domain containing 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:104,786,649...104,890,022
Ensembl chr14:104,821,215...104,886,197
JBrowse link
G Smarcd1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 ISO (PMID:12917342) RGD PMID:12917342 NCBI chr 7:141,355,623...141,366,725
Ensembl chr 7:141,355,994...141,366,732
JBrowse link
G Zmiz1 zinc finger, MIZ-type containing 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:1,749,191...1,954,633
Ensembl chr16:1,749,191...1,954,614
JBrowse link
G Zmiz2 zinc finger, MIZ-type containing 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:86,645,875...86,662,419
Ensembl chr14:86,652,365...86,661,441
JBrowse link
chromosome breakage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmga2 high mobility group AT-hook 2 ISO
ISS
(PMID:19549901)
GO_REF:0000024
RGD
UniProt
PMID:19549901 GO_REF:0000024 NCBI chr 7:65,159,944...65,275,408
Ensembl chr 7:65,159,944...65,275,408
JBrowse link
G Rfwd3 ring finger and WD repeat domain 3 ISO (MGI:MGI:5917601|PMID:28691929) RGD PMID:28691929 MGI:MGI:5917601 NCBI chr19:42,960,597...42,971,894
Ensembl chr19:42,964,586...42,972,101
JBrowse link
chromosome condensation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Banf1 BAF nuclear assembly factor 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:220,744,195...220,746,224
Ensembl chr 1:220,744,195...220,746,224
JBrowse link
G Banf2 BANF family member 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:138,128,123...138,183,750
Ensembl chr 3:138,174,054...138,183,696
JBrowse link
G Cdk1 cyclin-dependent kinase 1 IMP RGD PMID:15695611 RGD:2301352 NCBI chr20:20,576,341...20,591,510
Ensembl chr20:20,576,377...20,591,549
JBrowse link
G H1f0 H1 histone family, member 0 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:120,260,776...120,262,636 JBrowse link
G H1f1 H1.1 linker histone, cluster member IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:43,614,101...43,614,844
Ensembl chr17:43,614,101...43,614,844
JBrowse link
G H1f10 H1.10 linker histone IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:119,889,016...119,892,661
Ensembl chr 4:119,889,371...119,889,949
JBrowse link
G H1f2 H1.2 linker histone, cluster member IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:43,638,938...43,640,445
Ensembl chr17:43,639,749...43,640,387
JBrowse link
G H1f4 H1.4 linker histone, cluster member TAS
IBA
PMID:21873635 RGD
GO_Central
PMID:12211017, PMID:21873635 RGD:1300396, RGD:13792537 NCBI chr17:43,734,461...43,735,120
Ensembl chr17:43,734,461...43,735,120
JBrowse link
G H1f5 H1.5 linker histone, cluster member IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:44,766,313...44,766,981
Ensembl chr17:44,766,313...44,766,981
JBrowse link
G H1f6 H1.6 linker histone, cluster member IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:43,675,190...43,675,934
Ensembl chr17:43,675,190...43,675,934
JBrowse link
G H1f7 H1.7 linker histone IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:139,871,491...139,872,858
Ensembl chr 7:139,871,479...139,872,900
JBrowse link
G H1f8 H1.8 linker histone IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:147,844,658...147,849,779
Ensembl chr 4:147,844,658...147,849,779
JBrowse link
G H4f3 H1.3 linker histone, cluster member IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:43,797,711...43,798,450
Ensembl chr17:43,797,721...43,798,383
JBrowse link
G Hils1 histone linker H1 domain, spermatid-specific 1 ISO
IBA
(PMID:12920187)
PMID:21873635
RGD PMID:12920187, PMID:21873635 RGD:13792537 NCBI chr10:82,775,691...82,776,487
Ensembl chr10:82,775,691...82,776,487
JBrowse link
G Prm1 protamine 1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:4,945,995...4,946,241
Ensembl chr10:4,945,911...4,946,397
JBrowse link
G Prm2 protamine 2 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:4,950,484...4,950,920
Ensembl chr10:4,950,484...4,950,920
JBrowse link
G Prm3 protamine 3 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:4,951,557...4,952,071
Ensembl chr10:4,951,557...4,952,071
JBrowse link
G Rock2 Rho-associated coiled-coil containing protein kinase 2 TAS RGD PMID:12126956 RGD:633802 NCBI chr 6:42,180,864...42,289,910
Ensembl chr 6:42,180,894...42,289,908
JBrowse link
G Smc5 structural maintenance of chromosomes 5 ISO MGI:MGI:5882566 (MGI:MGI:5882483|PMID:26919979) RGD PMID:26919979 MGI:MGI:5882483 NCBI chr 1:240,977,898...241,046,273
Ensembl chr 1:240,977,898...241,046,256
JBrowse link
G Top2a DNA topoisomerase II alpha ISO (MGI:MGI:2158879|PMID:11835580) RGD PMID:11835580 MGI:MGI:2158879 NCBI chr10:86,901,467...86,930,947
Ensembl chr10:86,901,007...86,932,154
JBrowse link
chromosome organization involved in meiotic cell cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase ISO MGI:MGI:1926343 (MGI:MGI:83357|PMID:8843194) RGD PMID:8843194 MGI:MGI:83357 NCBI chr 8:58,015,938...58,119,973
Ensembl chr 8:58,015,940...58,120,045
JBrowse link
G Atrx ATRX, chromatin remodeler ISO
IEA
(MGI:MGI:3052396|PMID:15242786)
GO_REF:0000107
RGD
Ensembl
PMID:15242786 GO_REF:0000107, MGI:MGI:3052396 NCBI chr  X:76,820,110...76,979,155
Ensembl chr  X:76,692,970...76,708,878
Ensembl chr  X:76,692,970...76,708,878
JBrowse link
G Ccne1 cyclin E1 ISO MGI:MGI:1329034 (MGI:MGI:5698037|PMID:24586195) RGD PMID:24586195 MGI:MGI:5698037 NCBI chr 1:94,485,830...94,495,112
Ensembl chr 1:94,485,832...94,494,980
JBrowse link
G Ccne2 cyclin E2 ISO MGI:MGI:88316 (MGI:MGI:5698037|PMID:24586195) RGD PMID:24586195 MGI:MGI:5698037 NCBI chr 5:24,434,077...24,446,406
Ensembl chr 5:24,434,872...24,446,406
JBrowse link
G Dmc1 DNA meiotic recombinase 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:120,796,217...120,840,524
Ensembl chr 7:120,796,217...120,839,577
JBrowse link
G Meioc meiosis specific with coiled-coil domain ISO (MGI:MGI:5905073|PMID:28380054) RGD PMID:28380054 MGI:MGI:5905073 NCBI chr10:90,622,954...90,641,883
Ensembl chr10:90,622,992...90,642,151
JBrowse link
G Rad50 RAD50 double strand break repair protein ISO
IBA
MGI:MGI:2387852 (MGI:MGI:3831647|PMID:19001091)
PMID:21873635
RGD PMID:19001091, PMID:21873635 MGI:MGI:3831647, RGD:13792537 NCBI chr10:39,002,130...39,054,042
Ensembl chr10:39,001,498...39,054,142
JBrowse link
G Rad51 RAD51 recombinase ISO
IBA
MGI:MGI:5444025 (MGI:MGI:5442243|PMID:22778135)
PMID:21873635
RGD PMID:22778135, PMID:21873635 MGI:MGI:5442243, RGD:13792537 NCBI chr 3:110,918,240...110,942,920
Ensembl chr 3:110,918,243...110,942,917
JBrowse link
cohesin loading term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mau2 MAU2 sister chromatid cohesion factor ISO (PMID:22628566) RGD PMID:22628566 NCBI chr16:21,132,115...21,163,257
Ensembl chr16:21,132,147...21,163,257
JBrowse link
G Nipbl NIPBL, cohesin loading factor ISO (PMID:22628566)
(MGI:MGI:6102971|PMID:29094699)
RGD PMID:22628566, PMID:29094699 MGI:MGI:6102971 NCBI chr 2:57,508,830...57,676,197
Ensembl chr 2:57,509,428...57,600,820
JBrowse link
covalent chromatin modification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chd1 chromodomain helicase DNA binding protein 1 ISO (PMID:28866611) RGD PMID:28866611 NCBI chr 1:57,692,828...57,756,762
Ensembl chr 1:57,692,836...57,755,485
JBrowse link
G Setd5 SET domain containing 5 ISO (MGI:MGI:5812827|PMID:27864380) RGD PMID:27864380 MGI:MGI:5812827 NCBI chr 4:145,017,549...145,095,247
Ensembl chr 4:145,017,608...145,095,245
JBrowse link
deactivation of mitotic spindle assembly checkpoint term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdt1 chromatin licensing and DNA replication factor 1 ISO (PMID:22581055) RGD PMID:22581055 NCBI chr19:55,381,565...55,386,511
Ensembl chr19:55,381,565...55,386,511
JBrowse link
DNA conformation change term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase ISO (PMID:9558345) RGD PMID:9558345 NCBI chr 3:10,041,820...10,145,076
Ensembl chr 3:10,041,826...10,144,388
JBrowse link
G Hhex hematopoietically expressed homeobox ISO (PMID:18755198) RGD PMID:18755198 NCBI chr 1:256,101,994...256,107,581
Ensembl chr 1:256,101,903...256,107,649
JBrowse link
DNA duplex unwinding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actr5 actin related protein 5 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:155,118,567...155,132,073
Ensembl chr 3:155,119,042...155,131,829
JBrowse link
G Actr8 actin related protein 8 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr16:6,047,977...6,062,586
Ensembl chr16:6,048,004...6,062,550
JBrowse link
G Anxa1 annexin A1 IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:20655937, PMID:21873635 RGD:7421590, RGD:13792537 NCBI chr 1:237,893,983...237,910,002
Ensembl chr 1:237,893,966...237,910,012
JBrowse link
G Ascc3 activating signal cointegrator 1 complex subunit 3 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:22055184)
Ensembl
UniProt
RGD
PMID:22055184 GO_REF:0000024, GO_REF:0000107 NCBI chr20:55,253,670...55,557,249
Ensembl chr20:55,253,686...55,556,473
JBrowse link
G Atrx ATRX, chromatin remodeler IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr  X:76,820,110...76,979,155
Ensembl chr  X:76,692,970...76,708,878
Ensembl chr  X:76,692,970...76,708,878
JBrowse link
G Blm BLM RecQ like helicase ISO
IBA
(PMID:11735402), (PMID:24816114), (PMID:25901030)
PMID:21873635
RGD PMID:11735402, PMID:24816114, PMID:25901030, PMID:21873635 RGD:13792537 NCBI chr 1:142,246,773...142,332,616
Ensembl chr 1:142,246,790...142,332,588
JBrowse link
G Brip1 BRCA1 interacting protein C-terminal helicase 1 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:73,507,009...73,632,742
Ensembl chr10:73,507,100...73,629,581
JBrowse link
G Chd1 chromodomain helicase DNA binding protein 1 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:57,692,828...57,756,762
Ensembl chr 1:57,692,836...57,755,485
JBrowse link
G Chd1l chromodomain helicase DNA binding protein 1-like IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:199,714,044...199,792,270
Ensembl chr 2:199,716,713...199,771,896
JBrowse link
G Chd2 chromodomain helicase DNA binding protein 2 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:134,757,934...134,873,053
Ensembl chr 1:134,757,934...134,871,167
JBrowse link
G Chd3 chromodomain helicase DNA binding protein 3 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:55,943,467...55,970,417
Ensembl chr10:55,943,446...55,965,216
JBrowse link
G Chd4 chromodomain helicase DNA binding protein 4 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 4:157,612,531...157,645,660
Ensembl chr 4:157,612,536...157,645,659
JBrowse link
G Chd5 chromodomain helicase DNA binding protein 5 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 5:169,519,212...169,572,059
Ensembl chr 5:169,519,212...169,567,107
JBrowse link
G Chd6 chromodomain helicase DNA binding protein 6 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:156,937,746...157,099,328
Ensembl chr 3:156,937,733...157,099,306
JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 5:21,769,087...21,952,036
Ensembl chr 5:21,830,882...21,950,696
JBrowse link
G Chd8 chromodomain helicase DNA binding protein 8 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr15:28,612,932...28,672,574
Ensembl chr15:28,612,932...28,672,569
JBrowse link
G Chd9 chromodomain helicase DNA binding protein 9 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr19:17,364,969...17,517,757
Ensembl chr19:17,366,828...17,494,585
JBrowse link
G Chtf18 chromosome transmission fidelity factor 18 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:15,090,762...15,098,825
Ensembl chr10:15,090,316...15,098,791
JBrowse link
G Chtf8 chromosome transmission fidelity factor 8 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr19:39,077,580...39,087,880
Ensembl chr19:39,077,580...39,087,880
JBrowse link
G Ddx1 DEAD-box helicase 1 ISO
ISS
(PMID:18710941)
GO_REF:0000024
RGD
UniProt
PMID:18710941 GO_REF:0000024 NCBI chr 6:38,422,892...38,453,762
Ensembl chr 6:38,422,888...38,453,797
JBrowse link
G Ddx11 DEAD/H-box helicase 11 ISO
IBA
(PMID:10648783), (PMID:18499658), (PMID:26503245)
PMID:21873635
RGD PMID:10648783, PMID:18499658, PMID:26503245, PMID:21873635 RGD:13792537 NCBI chr 9:114,113,642...114,133,908
Ensembl chr 9:114,111,580...114,132,492
JBrowse link
G Ddx3x DEAD-box helicase 3, X-linked IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr  X:10,400,363...10,414,010
Ensembl chr  X:10,400,366...10,413,995
JBrowse link
G Dhx36 DEAH-box helicase 36 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:152,785,844...152,824,549
Ensembl chr 2:152,785,844...152,824,547
JBrowse link
G Dhx9 DExH-box helicase 9 ISO (PMID:12711669), (PMID:21561811), (PMID:9111062) RGD PMID:9111062, PMID:12711669, PMID:21561811 NCBI chr13:70,885,503...70,922,278
Ensembl chr13:70,885,504...70,922,245
JBrowse link
G Dna2 DNA replication helicase/nuclease 2 IEA GO_REF:0000108 GOC GO_REF:0000108
G Dscc1 DNA replication and sister chromatid cohesion 1 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 7:94,759,076...94,774,787
Ensembl chr 7:94,758,800...94,774,569
JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr16:8,734,028...8,804,610
Ensembl chr16:8,734,035...8,804,610
JBrowse link
G Ercc8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:39,434,617...39,473,392
Ensembl chr 2:39,434,634...39,472,017
JBrowse link
G Fancm FA complementation group M IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 6:86,823,195...86,877,067
Ensembl chr 6:86,823,684...86,876,633
JBrowse link
G Fbh1 F-box DNA helicase 1 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr17:70,399,093...70,437,151
Ensembl chr17:70,399,049...70,437,144
JBrowse link
G Gins2 GINS complex subunit 2 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr19:54,151,048...54,163,701
Ensembl chr19:54,151,048...54,163,608
JBrowse link
G Gins4 GINS complex subunit 4 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr16:73,584,412...73,596,808
Ensembl chr16:73,584,521...73,596,793
JBrowse link
G Gtf2f2 general transcription factor IIF subunit 2 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr15:57,942,057...58,068,892
Ensembl chr15:57,942,059...58,068,892
JBrowse link
G Helb DNA helicase B IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 7:64,860,641...64,888,146
Ensembl chr 7:64,860,666...64,887,448
JBrowse link
G Ighmbp2 immunoglobulin mu DNA binding protein 2 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:218,509,274...218,531,922
Ensembl chr 1:218,508,950...218,532,142
JBrowse link
G Ino80 INO80 complex ATPase subunit IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:111,186,371...111,266,542
Ensembl chr 3:111,187,711...111,266,542
JBrowse link
G Mcm3 minichromosome maintenance complex component 3 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 9:26,914,057...26,932,201
Ensembl chr 9:26,914,057...26,932,201
JBrowse link
G Mcm5 minichromosome maintenance complex component 5 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr19:14,523,482...14,561,281
Ensembl chr19:14,523,554...14,561,278
JBrowse link
G Mcm8 minichromosome maintenance 8 homologous recombination repair factor IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:125,470,499...125,500,795
Ensembl chr 3:125,470,551...125,500,795
JBrowse link
G Mcm9 minichromosome maintenance 9 homologous recombination repair factor ISO (PMID:26300262) RGD PMID:26300262 NCBI chr20:34,818,093...34,930,157
Ensembl chr20:34,846,804...34,929,965
JBrowse link
G Mcmdc1 minichromosome maintenance deficient domain containing 1 IEA GO_REF:0000002 InterPro GO_REF:0000002
G Mcmdc2 minichromosome maintenance domain containing 2 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:8,973,861...9,039,616
Ensembl chr 5:8,978,010...9,038,594
JBrowse link
G Mre11 MRE11 homolog, double strand break repair nuclease ISO
IEA
(PMID:15790808)
GO_REF:0000107
RGD
Ensembl
PMID:15790808 GO_REF:0000107 NCBI chr 8:13,304,355...13,350,329
Ensembl chr 8:13,305,152...13,352,489
JBrowse link
G Nbn nibrin ISO
IBA
IEA
(PMID:15790808)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:15790808, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 5:29,622,347...29,656,877
Ensembl chr 5:29,622,281...29,656,864
JBrowse link
G Pif1 PIF1 5'-to-3' DNA helicase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:71,124,477...71,133,460
Ensembl chr 8:71,125,414...71,132,629
JBrowse link
G Polq DNA polymerase theta IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr11:66,585,860...66,695,369
Ensembl chr11:66,585,881...66,695,353
JBrowse link
G Pot1 protection of telomeres 1 ISO (PMID:16030011) RGD PMID:16030011 NCBI chr 4:51,888,632...51,946,764
Ensembl chr 4:51,888,634...51,946,715
JBrowse link
G Rad50 RAD50 double strand break repair protein ISO
IBA
(PMID:15790808)
PMID:21873635
RGD PMID:15790808, PMID:21873635 RGD:13792537 NCBI chr10:39,002,130...39,054,042
Ensembl chr10:39,001,498...39,054,142
JBrowse link
G Recql RecQ like helicase IEA
IBA
GO_REF:0000108
PMID:21873635
GOC PMID:21873635 GO_REF:0000108, RGD:13792537 NCBI chr 4:176,581,892...176,606,520
Ensembl chr 4:176,581,897...176,606,382
JBrowse link
G Recql4 RecQ like helicase 4 ISO
IBA
(PMID:19177149)
PMID:21873635
RGD PMID:19177149, PMID:21873635 RGD:13792537 NCBI chr 7:117,765,892...117,773,128
Ensembl chr 7:117,763,783...117,773,134
JBrowse link
G Recql5 RecQ like helicase 5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:104,443,735...104,482,889
Ensembl chr10:104,443,736...104,482,838
JBrowse link
G Rfc2 replication factor C subunit 2 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr12:25,130,375...25,143,480
Ensembl chr12:25,130,377...25,143,480
JBrowse link
G Rfc3 replication factor C subunit 3 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr12:1,460,581...1,471,344
Ensembl chr12:1,460,538...1,471,357
JBrowse link
G Rfc4 replication factor C subunit 4 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr11:81,358,592...81,373,044
Ensembl chr11:81,358,592...81,373,043
JBrowse link
G Rfc5 replication factor C subunit 5 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr12:44,931,494...44,941,051
Ensembl chr12:44,931,494...44,941,324
JBrowse link
G RGD1564855 similar to RuvB-like protein 1 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr  X:1,854,580...1,856,333
Ensembl chr  X:1,854,751...1,856,258
JBrowse link
G Rtel1 regulator of telomere elongation helicase 1 ISO
IBA
IEA
(MGI:MGI:5522574|PMID:24115439)
PMID:21873635
GO_REF:0000108
RGD
GOC
PMID:24115439, PMID:21873635 GO_REF:0000108, MGI:MGI:5522574, RGD:13792537 NCBI chr 3:176,818,012...176,856,531
Ensembl chr 3:176,818,437...176,856,531
JBrowse link
G Ruvbl1 RuvB-like AAA ATPase 1 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 4:120,411,917...120,447,458
Ensembl chr 4:120,411,991...120,447,455
JBrowse link
G Ruvbl2 RuvB-like AAA ATPase 2 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:101,413,766...101,426,970
Ensembl chr 1:101,413,766...101,426,852
JBrowse link
G Slc25a16 solute carrier family 25 member 16 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr20:27,283,383...27,308,069
Ensembl chr20:27,254,984...27,308,069
JBrowse link
G Smarcad1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1` IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 4:95,884,020...95,945,248
Ensembl chr 4:95,884,743...95,945,248
JBrowse link
G Smarcal1 Swi/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 9:79,943,775...79,990,230
Ensembl chr 9:79,944,132...79,990,229
JBrowse link
G Sub1 SUB1 regulator of transcription IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 2:62,019,902...62,034,704
Ensembl chr 2:62,022,567...62,034,628
JBrowse link
G Supv3l1 Suv3 like RNA helicase IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:12466530)
Ensembl
UniProt
RGD
PMID:12466530 GO_REF:0000024, GO_REF:0000107 NCBI chr20:32,057,530...32,080,170
Ensembl chr20:32,057,454...32,080,088
JBrowse link
G Trex1 three prime repair exonuclease 1 ISO (MGI:MGI:5637600|PMID:25848017) RGD PMID:25848017 MGI:MGI:5637600 NCBI chr 8:117,796,127...117,797,427
Ensembl chr 8:117,796,128...117,797,427
JBrowse link
G Wrn WRN RecQ like helicase ISO
IBA
(PMID:11735402), (PMID:26420422)
PMID:21873635
RGD PMID:11735402, PMID:26420422, PMID:21873635 RGD:13792537 NCBI chr16:62,483,773...62,619,018
Ensembl chr16:62,483,761...62,615,375
JBrowse link
G Wrnip1 WRN helicase interacting protein 1 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr17:32,933,395...32,953,641
Ensembl chr17:32,933,396...32,953,641
JBrowse link
G Xrcc5 X-ray repair cross complementing 5 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 9:79,659,275...79,748,050
Ensembl chr 9:79,659,251...79,748,078
JBrowse link
G Xrcc6 X-ray repair cross complementing 6 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 7:123,259,881...123,280,613
Ensembl chr 7:123,259,761...123,280,612
JBrowse link
G Zranb3 zinc finger RANBP2-type containing 3 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr13:44,661,375...44,812,430
Ensembl chr13:44,661,398...44,798,543
JBrowse link
DNA geometric change term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmgb1 high mobility group box 1 IDA
ISS
PMID:10962007
GO_REF:0000024
AgBase PMID:10962007 GO_REF:0000024, RGD:8554262 NCBI chr12:7,082,529...7,090,246
Ensembl chr16:37,500,017...37,502,237
JBrowse link
G Hmgb3 high mobility group box 3 ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr17:36,690,190...36,694,329
Ensembl chr17:36,690,249...36,694,325
Ensembl chr14:36,690,249...36,694,325
JBrowse link
G LOC108349189 high mobility group protein B1 pseudogene ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr  X:115,351,012...115,351,755
Ensembl chr  X:115,351,114...115,351,755
JBrowse link
G LOC688583 similar to High mobility group protein 4 (HMG-4) (High mobility group protein 2a) (HMG-2a) ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr14:51,458,436...51,462,755
Ensembl chr17:36,690,249...36,694,325
Ensembl chr14:36,690,249...36,694,325
JBrowse link
G LOC690117 similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30) ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr16:37,500,017...37,502,245 JBrowse link
G Mterf1 mitochondrial transcription termination factor 1 ISO
ISS
(PMID:20550934)
GO_REF:0000024
RGD
UniProt
PMID:20550934 GO_REF:0000024 NCBI chr 4:27,365,310...27,372,374
Ensembl chr 4:27,365,376...27,372,372
JBrowse link
DNA methylation-dependent heterochromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnmt3a DNA methyltransferase 3 alpha ISO MGI:MGI:1261819 (MGI:MGI:3611125|PMID:16322236), (MGI:MGI:3768461|PMID:17938196) RGD PMID:16322236, PMID:17938196 MGI:MGI:3611125, MGI:MGI:3768461 NCBI chr 6:28,205,375...28,346,052
Ensembl chr 6:28,235,695...28,340,577
JBrowse link
G Dnmt3b DNA methyltransferase 3 beta ISO MGI:MGI:1261827 (MGI:MGI:3768461|PMID:17938196) RGD PMID:17938196 MGI:MGI:3768461 NCBI chr 3:149,131,541...149,170,061
Ensembl chr 3:149,131,785...149,208,786
JBrowse link
G Hdac1 histone deacetylase 1 ISO UniProtKB:Q9UBB5 (PMID:23770133) RGD PMID:23770133 NCBI chr 5:147,716,664...147,743,723
Ensembl chr 5:147,716,664...147,743,723
JBrowse link
G Hells helicase, lymphoid specific ISO
IBA
(MGI:MGI:3573964|PMID:15647320)
PMID:21873635
RGD PMID:15647320, PMID:21873635 MGI:MGI:3573964, RGD:13792537 NCBI chr 1:257,901,856...257,953,889
Ensembl chr 1:257,766,691...257,949,183
Ensembl chr 1:257,766,691...257,949,183
JBrowse link
G LOC100911660 lymphocyte-specific helicase-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:257,614,688...257,660,184
Ensembl chr 1:257,766,691...257,949,183
Ensembl chr 1:257,766,691...257,949,183
JBrowse link
G Mbd2 methyl-CpG binding domain protein 2 ISO UniProtKB:Q13547 (PMID:23770133) RGD PMID:23770133 NCBI chr18:65,814,026...65,885,115
Ensembl chr18:65,814,026...65,885,114
JBrowse link
G Mbd3 methyl-CpG binding domain protein 3 ISO (MGI:MGI:3611125|PMID:16322236) RGD PMID:16322236 MGI:MGI:3611125 NCBI chr 7:12,179,046...12,186,251
Ensembl chr 7:12,179,203...12,186,656
JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 ISO (MGI:MGI:3611125|PMID:16322236) RGD PMID:16322236 MGI:MGI:3611125 NCBI chr 8:22,648,323...22,739,468
Ensembl chr 8:22,648,323...22,739,468
JBrowse link
DNA packaging term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G H2bc1 H2B clustered histone 1 ISO (MGI:MGI:3702345|PMID:17261847) RGD PMID:17261847 MGI:MGI:3702345 NCBI chr17:43,423,111...43,423,580
Ensembl chr17:43,423,111...43,423,580
JBrowse link
G LOC100363125 rCG42854-like ISO (MGI:MGI:3702345|PMID:17261847) RGD PMID:17261847 MGI:MGI:3702345 NCBI chr  X:13,991,860...13,992,606
Ensembl chr  X:13,992,064...13,992,429
JBrowse link
DNA replication-dependent nucleosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asf1a anti-silencing function 1A histone chaperone ISO
IBA
(PMID:14718166)
PMID:21873635
RGD PMID:14718166, PMID:21873635 RGD:13792537 NCBI chr20:34,894,419...34,909,265
Ensembl chr20:34,894,419...34,909,265
JBrowse link
G Asf1b anti-silencing function 1B histone chaperone ISO
IBA
(PMID:14718166)
PMID:21873635
RGD PMID:14718166, PMID:21873635 RGD:13792537 NCBI chr19:25,077,918...25,092,491
Ensembl chr19:25,077,918...25,092,491
JBrowse link
G Chaf1a chromatin assembly factor 1 subunit A ISO (PMID:14718166) RGD PMID:14718166 NCBI chr 9:11,000,869...11,027,631
Ensembl chr 9:11,001,129...11,027,506
JBrowse link
G Chaf1b chromatin assembly factor 1 subunit B ISO (PMID:14718166) RGD PMID:14718166 NCBI chr11:34,101,248...34,121,371
Ensembl chr11:34,101,197...34,121,378
JBrowse link
G H3c1 H3 clustered histone 1 ISO (PMID:14718166) RGD PMID:14718166 NCBI chr17:43,616,206...43,616,735
Ensembl chr17:44,839,721...44,840,131
Ensembl chr17:44,839,721...44,840,131
Ensembl chr17:44,839,721...44,840,131
Ensembl chr17:44,839,721...44,840,131
JBrowse link
G Hat1 histone acetyltransferase 1 ISO (PMID:14718166) RGD PMID:14718166 NCBI chr 3:58,022,395...58,070,067
Ensembl chr 3:58,022,238...58,070,068
JBrowse link
G Hist1h2ail1 histone cluster 1 H2a family member I like 1 ISO (PMID:14718166) RGD PMID:14718166 NCBI chr17:43,814,773...43,815,183
Ensembl chr17:43,814,773...43,815,183
Ensembl chr17:43,814,773...43,815,183
JBrowse link
G Hist1h3b histone cluster 1, H3b ISO (PMID:14718166) RGD PMID:14718166 NCBI chr17:44,760,023...44,764,058
Ensembl chr17:44,839,721...44,840,131
Ensembl chr17:44,839,721...44,840,131
Ensembl chr17:44,839,721...44,840,131
Ensembl chr17:44,839,721...44,840,131
JBrowse link
G Hist1h4b histone cluster 1 H4 family member B ISO (PMID:14718166) RGD PMID:14718166 NCBI chr17:44,522,144...44,526,587
Ensembl chr17:44,522,140...44,526,583
JBrowse link
G Hist1h4m histone cluster 1, H4m ISO (PMID:14718166) RGD PMID:14718166 Ensembl chr17:44,815,684...44,815,995 JBrowse link
G Hist2h4 histone cluster 2, H4 ISO (PMID:14718166) RGD PMID:14718166 NCBI chr 2:198,411,955...198,412,350
Ensembl chr 2:198,411,955...198,412,350
JBrowse link
G Hist2h4a histone cluster 2 H4 family member A ISO (PMID:14718166) RGD PMID:14718166 NCBI chr 4:170,800,539...170,800,979
Ensembl chr17:43,770,250...43,770,561
Ensembl chr17:43,770,250...43,770,561
Ensembl chr17:43,770,250...43,770,561
Ensembl chr17:43,770,250...43,770,561
Ensembl chr 2:43,770,250...43,770,561
Ensembl chr17:43,770,250...43,770,561
Ensembl chr17:43,770,250...43,770,561
Ensembl chr17:43,770,250...43,770,561
Ensembl chr 4:43,770,250...43,770,561
Ensembl chr 4:43,770,250...43,770,561
Ensembl chr 4:43,770,250...43,770,561
Ensembl chr 4:43,770,250...43,770,561
JBrowse link
G Ipo4 importin 4 ISO (PMID:14718166) RGD PMID:14718166 NCBI chr15:34,304,425...34,314,552
Ensembl chr15:34,304,425...34,314,345
JBrowse link
G LOC100912290 histone H4-like ISO (PMID:14718166) RGD PMID:14718166 NCBI chr 4:170,092,457...170,117,607 JBrowse link
G LOC102548682 histone H4-like ISO (PMID:14718166) RGD PMID:14718166 NCBI chr17:43,616,218...43,673,659
Ensembl chr17:43,791,657...43,792,067
Ensembl chr17:43,791,657...43,792,067
Ensembl chr17:43,791,657...43,792,067
Ensembl chr 2:43,791,657...43,792,067
Ensembl chr17:43,791,657...43,792,067
Ensembl chr17:43,791,657...43,792,067
Ensembl chr 2:43,791,657...43,792,067
Ensembl chr 2:43,791,657...43,792,067
JBrowse link
G LOC102551184 histone H4-like ISO (PMID:14718166) RGD PMID:14718166 NCBI chr17:43,770,198...43,821,579 JBrowse link
G LOC684819 similar to H3 histone, family 2 isoform 2 ISO (PMID:14718166) RGD PMID:14718166 NCBI chr17:43,794,397...43,795,493 JBrowse link
G Nasp nuclear autoantigenic sperm protein ISO
ISS
IBA
(PMID:14718166)
(MGI:MGI:3694318|PMID:16728391)
GO_REF:0000024
PMID:21873635
RGD
UniProt
PMID:14718166, PMID:16728391, PMID:21873635 GO_REF:0000024, MGI:MGI:3694318, RGD:13792537 NCBI chr 5:135,446,485...135,472,113
Ensembl chr 5:135,446,962...135,472,116
JBrowse link
G Rbbp4 RB binding protein 4, chromatin remodeling factor ISO (PMID:14718166) RGD PMID:14718166 NCBI chr 5:147,499,880...147,535,240
Ensembl chr 5:147,499,882...147,535,240
JBrowse link
G RGD1562378 histone H4 variant H4-v.1 ISO (PMID:14718166) RGD PMID:14718166 NCBI chr 4:170,762,862...170,763,962
Ensembl chr 4:170,763,605...170,763,916
JBrowse link
DNA replication-independent nucleosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asf1a anti-silencing function 1A histone chaperone ISO
IBA
(PMID:14718166)
PMID:21873635
RGD PMID:14718166, PMID:21873635 RGD:13792537 NCBI chr20:34,894,419...34,909,265
Ensembl chr20:34,894,419...34,909,265
JBrowse link
G Asf1b anti-silencing function 1B histone chaperone ISO
IBA
(PMID:14718166)
PMID:21873635
RGD PMID:14718166, PMID:21873635 RGD:13792537 NCBI chr19:25,077,918...25,092,491
Ensembl chr19:25,077,918...25,092,491
JBrowse link
G Atrx ATRX, chromatin remodeler IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:22391447)
Ensembl
UniProt
RGD
PMID:22391447 GO_REF:0000024, GO_REF:0000107 NCBI chr  X:76,820,110...76,979,155
Ensembl chr  X:76,692,970...76,708,878
Ensembl chr  X:76,692,970...76,708,878
JBrowse link
G Cabin1 calcineurin binding protein 1 IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(PMID:14718166)
GO_REF:0000002
Ensembl
RGD
InterPro
PMID:14718166, PMID:21873635 GO_REF:0000002, GO_REF:0000107, RGD:13792537 NCBI chr20:13,836,032...13,963,003
Ensembl chr20:13,836,030...13,963,003
JBrowse link
G H3f3a H3 histone family member 3A ISO (PMID:14718166) RGD PMID:14718166 NCBI chr13:99,091,246...99,102,828
Ensembl chr13:99,091,763...99,101,208
JBrowse link
G H3f3b H3 histone family member 3B ISO (PMID:14718166) RGD PMID:14718166 NCBI chr10:104,573,666...104,575,890
Ensembl chr10:104,573,664...104,575,890
JBrowse link
G Hat1 histone acetyltransferase 1 ISO (PMID:14718166) RGD PMID:14718166 NCBI chr 3:58,022,395...58,070,067
Ensembl chr 3:58,022,238...58,070,068
JBrowse link
G Hira histone cell cycle regulator ISO
IBA
(PMID:14718166)
PMID:21873635
RGD PMID:14718166, PMID:21873635 RGD:13792537 NCBI chr11:86,168,196...86,276,430
Ensembl chr11:86,168,196...86,276,430
JBrowse link
G Hist1h4b histone cluster 1 H4 family member B ISO (PMID:14718166) RGD PMID:14718166 NCBI chr17:44,522,144...44,526,587
Ensembl chr17:44,522,140...44,526,583
JBrowse link
G Hist1h4m histone cluster 1, H4m ISO (PMID:14718166) RGD PMID:14718166 Ensembl chr17:44,815,684...44,815,995 JBrowse link
G Hist2h4 histone cluster 2, H4 ISO (PMID:14718166) RGD PMID:14718166 NCBI chr 2:198,411,955...198,412,350
Ensembl chr 2:198,411,955...198,412,350
JBrowse link
G Hist2h4a histone cluster 2 H4 family member A ISO (PMID:14718166) RGD PMID:14718166 NCBI chr 4:170,800,539...170,800,979
Ensembl chr17:43,770,250...43,770,561
Ensembl chr17:43,770,250...43,770,561
Ensembl chr17:43,770,250...43,770,561
Ensembl chr17:43,770,250...43,770,561
Ensembl chr 2:43,770,250...43,770,561
Ensembl chr17:43,770,250...43,770,561
Ensembl chr17:43,770,250...43,770,561
Ensembl chr17:43,770,250...43,770,561
Ensembl chr 4:43,770,250...43,770,561
Ensembl chr 4:43,770,250...43,770,561
Ensembl chr 4:43,770,250...43,770,561
Ensembl chr 4:43,770,250...43,770,561
JBrowse link
G Ipo4 importin 4 ISO (PMID:14718166) RGD PMID:14718166 NCBI chr15:34,304,425...34,314,552
Ensembl chr15:34,304,425...34,314,345
JBrowse link
G LOC100911837 protein HIRA-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:85,802,536...85,896,680
Ensembl chr11:85,802,605...85,895,613
JBrowse link
G LOC100912290 histone H4-like ISO (PMID:14718166) RGD PMID:14718166 NCBI chr 4:170,092,457...170,117,607 JBrowse link
G LOC102548682 histone H4-like ISO (PMID:14718166) RGD PMID:14718166 NCBI chr17:43,616,218...43,673,659
Ensembl chr17:43,791,657...43,792,067
Ensembl chr17:43,791,657...43,792,067
Ensembl chr17:43,791,657...43,792,067
Ensembl chr 2:43,791,657...43,792,067
Ensembl chr17:43,791,657...43,792,067
Ensembl chr17:43,791,657...43,792,067
Ensembl chr 2:43,791,657...43,792,067
Ensembl chr 2:43,791,657...43,792,067
JBrowse link
G LOC102551184 histone H4-like ISO (PMID:14718166) RGD PMID:14718166 NCBI chr17:43,770,198...43,821,579 JBrowse link
G Nasp nuclear autoantigenic sperm protein ISO (PMID:14718166) RGD PMID:14718166 NCBI chr 5:135,446,485...135,472,113
Ensembl chr 5:135,446,962...135,472,116
JBrowse link
G Rbbp4 RB binding protein 4, chromatin remodeling factor ISO (PMID:14718166) RGD PMID:14718166 NCBI chr 5:147,499,880...147,535,240
Ensembl chr 5:147,499,882...147,535,240
JBrowse link
G RGD1562378 histone H4 variant H4-v.1 ISO (PMID:14718166) RGD PMID:14718166 NCBI chr 4:170,762,862...170,763,962
Ensembl chr 4:170,763,605...170,763,916
JBrowse link
G Ubn1 ubinuclein 1 ISO (PMID:14718166) RGD PMID:14718166 NCBI chr10:10,690,224...10,725,655
Ensembl chr10:10,690,224...10,725,655
JBrowse link
DNA replication-independent nucleosome organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Supt16h SPT16 homolog, facilitates chromatin remodeling subunit IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:28,574,841...28,611,959
Ensembl chr15:28,575,480...28,611,946
JBrowse link
DNA rewinding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Smarcal1 Swi/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:79,943,775...79,990,230
Ensembl chr 9:79,944,132...79,990,229
JBrowse link
G Zranb3 zinc finger RANBP2-type containing 3 ISO
IBA
(PMID:21078962), (PMID:22705370)
PMID:21873635
RGD PMID:21078962, PMID:22705370, PMID:21873635 RGD:13792537 NCBI chr13:44,661,375...44,812,430
Ensembl chr13:44,661,398...44,798,543
JBrowse link
DNA strand renaturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Blm BLM RecQ like helicase IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:142,246,773...142,332,616
Ensembl chr 1:142,246,790...142,332,588
JBrowse link
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 7:144,865,302...144,871,592
Ensembl chr 7:144,865,608...144,871,585
JBrowse link
G Rad54l RAD54 like IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 5:134,948,511...134,978,125
Ensembl chr 5:134,948,512...134,978,125
JBrowse link
G Recql RecQ like helicase ISO (PMID:19177149) RGD PMID:19177149 NCBI chr 4:176,581,892...176,606,520
Ensembl chr 4:176,581,897...176,606,382
JBrowse link
G Recql4 RecQ like helicase 4 ISO (PMID:19177149) RGD PMID:19177149 NCBI chr 7:117,765,892...117,773,128
Ensembl chr 7:117,763,783...117,773,134
JBrowse link
G Smarca1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr  X:134,634,651...134,719,503
Ensembl chr  X:134,647,703...134,719,097
JBrowse link
G Smarcal1 Swi/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 9:79,943,775...79,990,230
Ensembl chr 9:79,944,132...79,990,229
JBrowse link
G Tp53 tumor protein p53 ISO
ISS
(PMID:8183576)
GO_REF:0000024
RGD
UniProt
PMID:8183576 GO_REF:0000024 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
G Zranb3 zinc finger RANBP2-type containing 3 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr13:44,661,375...44,812,430
Ensembl chr13:44,661,398...44,798,543
JBrowse link
DNA topological change term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ercc3 ERCC excision repair 3, TFIIH core complex helicase subunit ISO (PMID:8663148) RGD PMID:8663148 NCBI chr18:25,037,668...25,068,380
Ensembl chr18:25,037,625...25,068,389
JBrowse link
G Hmgb2 high mobility group box 2 ISS
ISO
GO_REF:0000024
(PMID:11275566)
AgBase
RGD
PMID:11275566 GO_REF:0000024 NCBI chr16:36,077,615...36,080,191
Ensembl chr16:36,077,617...36,080,191
Ensembl chr11:36,077,617...36,080,191
JBrowse link
G Hmgb2l1 high mobility group box 2-like 1 ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr11:49,708,038...49,709,128
Ensembl chr16:36,077,617...36,080,191
Ensembl chr11:36,077,617...36,080,191
JBrowse link
G RGD1559962 similar to High mobility group protein 2 (HMG-2) ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr 1:20,416,735...20,417,959
Ensembl chr 1:20,417,008...20,417,637
JBrowse link
G Top1 DNA topoisomerase I IDA
IBA
IEA
ISO
PMID:21873635
GO_REF:0000104
(MGI:MGI:3612364|PMID:16261531), (MGI:MGI:70738|PMID:7842491)
(PMID:14594810), (PMID:14654701), (PMID:8567649), (PMID:8631793), (PMID:8631794), (PMID:9611241)
UniProt
RGD
PMID:7842491, PMID:8567649, PMID:8631793, PMID:8631794, PMID:9611241, PMID:14594810, PMID:14654701, PMID:16261531, PMID:1332866, PMID:21873635 GO_REF:0000104, MGI:MGI:3612364, MGI:MGI:70738, RGD:1580856, RGD:13792537 NCBI chr 3:156,635,688...156,717,686
Ensembl chr 3:156,642,464...156,717,686
JBrowse link
G Top1mt DNA topoisomerase I mitochondrial IEA
IBA
GO_REF:0000104
PMID:21873635
UniProt PMID:21873635 GO_REF:0000104, RGD:13792537 NCBI chr 7:116,688,801...116,714,421
Ensembl chr 7:116,688,701...116,712,387
JBrowse link
G Top2a DNA topoisomerase II alpha IDA
ISO
IEA
(MGI:MGI:51613|PMID:1331984), (MGI:MGI:895157|PMID:9224616)
(PMID:12711669), (PMID:22323612)
GO_REF:0000002
GO_REF:0000107
RGD
InterPro
Ensembl
PMID:1331984, PMID:9224616, PMID:12711669, PMID:22323612, PMID:11334111 GO_REF:0000002, GO_REF:0000107, MGI:MGI:51613, MGI:MGI:895157, RGD:1580614 NCBI chr10:86,901,467...86,930,947
Ensembl chr10:86,901,007...86,932,154
JBrowse link
G Top2b DNA topoisomerase II beta ISO (PMID:10684600) RGD PMID:10684600 NCBI chr15:10,262,972...10,319,741
Ensembl chr15:10,262,651...10,320,233
JBrowse link
G Top3a DNA topoisomerase III alpha ISO
IBA
(PMID:20445207)
PMID:21873635
RGD PMID:20445207, PMID:21873635 RGD:13792537 NCBI chr10:46,980,646...47,018,728
Ensembl chr10:46,981,958...47,018,537
JBrowse link
G Top3b DNA topoisomerase III beta IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:88,346,305...88,374,896
Ensembl chr11:88,346,313...88,374,679
JBrowse link
DNA unwinding involved in DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Blm BLM RecQ like helicase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:142,246,773...142,332,616
Ensembl chr 1:142,246,790...142,332,588
JBrowse link
G Mcm2 minichromosome maintenance complex component 2 ISO
IBA
(MGI:MGI:2156014|PMID:10531422)
PMID:21873635
RGD PMID:10531422, PMID:21873635 MGI:MGI:2156014, RGD:13792537 NCBI chr 4:120,825,699...120,840,221
Ensembl chr 4:120,825,699...120,840,111
JBrowse link
G Mcm4 minichromosome maintenance complex component 4 ISO
IBA
PR:P97311|PR:Q61881 (MGI:MGI:3582148|PMID:15917436)
PMID:21873635
RGD PMID:15917436, PMID:21873635 MGI:MGI:3582148, RGD:13792537 NCBI chr11:89,511,191...89,524,892
Ensembl chr11:89,511,191...89,524,892
JBrowse link
G Mcm6 minichromosome maintenance complex component 6 ISO
IBA
IEA
PR:P49717|PR:Q61881 (MGI:MGI:3582148|PMID:15917436)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:15917436, PMID:21873635 GO_REF:0000107, MGI:MGI:3582148, RGD:13792537 NCBI chr13:45,042,882...45,068,073
Ensembl chr13:45,042,882...45,068,077
JBrowse link
G Mcm7 minichromosome maintenance complex component 7 ISO
IBA
PR:P49717|PR:P97311 (MGI:MGI:3582148|PMID:15917436)
PMID:21873635
RGD PMID:15917436, PMID:21873635 MGI:MGI:3582148, RGD:13792537 NCBI chr12:19,306,615...19,313,877
Ensembl chr12:19,306,607...19,314,016
JBrowse link
G Mcmdc2 minichromosome maintenance domain containing 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:8,973,861...9,039,616
Ensembl chr 5:8,978,010...9,038,594
JBrowse link
G Pura purine rich element binding protein A ISO
IEA
(PMID:15777841)
GO_REF:0000107
RGD
Ensembl
PMID:15777841 GO_REF:0000107 NCBI chr18:29,104,712...29,114,918
Ensembl chr18:29,110,242...29,111,156
JBrowse link
G Rad51 RAD51 recombinase ISO (PMID:7988572) RGD PMID:7988572 NCBI chr 3:110,918,240...110,942,920
Ensembl chr 3:110,918,243...110,942,917
JBrowse link
G Recql RecQ like helicase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:176,581,892...176,606,520
Ensembl chr 4:176,581,897...176,606,382
JBrowse link
G Recql4 RecQ like helicase 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:117,765,892...117,773,128
Ensembl chr 7:117,763,783...117,773,134
JBrowse link
G Recql5 RecQ like helicase 5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:104,443,735...104,482,889
Ensembl chr10:104,443,736...104,482,838
JBrowse link
G Rpa1 replication protein A1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:62,140,419...62,191,518
Ensembl chr10:62,140,419...62,191,512
JBrowse link
G Ssbp1 single stranded DNA binding protein 1 ISO
IEA
(PMID:26446790)
GO_REF:0000107
RGD
Ensembl
PMID:26446790 GO_REF:0000107 NCBI chr 4:68,634,844...68,645,112
Ensembl chr 4:68,634,929...68,645,172
JBrowse link
G Twnk twinkle mtDNA helicase ISO (MGI:MGI:2136707|PMID:11431692)
(PMID:15167897)
RGD PMID:11431692, PMID:15167897 MGI:MGI:2136707 NCBI chr 1:264,756,060...264,762,892
Ensembl chr 1:264,756,499...264,762,892
JBrowse link
G Wrn WRN RecQ like helicase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:62,483,773...62,619,018
Ensembl chr16:62,483,761...62,615,375
JBrowse link
dsDNA loop formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cggbp1 CGG triplet repeat binding protein 1 ISO
IEA
(PMID:31547883)
GO_REF:0000107
RGD
Ensembl
PMID:31547883 GO_REF:0000107 NCBI chr11:1,896,166...1,915,603
Ensembl chr11:1,896,209...1,915,587
JBrowse link
establishment of mitotic sister chromatid cohesion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Naa50 N(alpha)-acetyltransferase 50, NatE catalytic subunit ISO (PMID:27422821) RGD PMID:27422821 NCBI chr11:61,508,162...61,530,830
Ensembl chr11:61,462,994...61,530,837
JBrowse link
G Nipbl NIPBL, cohesin loading factor IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:57,508,830...57,676,197
Ensembl chr 2:57,509,428...57,600,820
JBrowse link
establishment of sister chromatid cohesion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddx11 DEAD/H-box helicase 11 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:114,113,642...114,133,908
Ensembl chr 9:114,111,580...114,132,492
JBrowse link
female meiosis sister chromatid cohesion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rad51c RAD51 paralog C ISO MGI:MGI:3707422|MGI:MGI:3707425 (MGI:MGI:3703317|PMID:17312021) RGD PMID:17312021 MGI:MGI:3703317 NCBI chr10:74,697,713...74,724,004
Ensembl chr10:74,697,716...74,724,472
JBrowse link
G Sycp3 synaptonemal complex protein 3 ISO (MGI:MGI:3578071|PMID:15870106) RGD PMID:15870106 MGI:MGI:3578071 NCBI chr 7:29,029,887...29,044,344
Ensembl chr 7:29,029,263...29,044,251
JBrowse link
G-quadruplex DNA unwinding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Blm BLM RecQ like helicase ISO
IBA
(PMID:11735402)
PMID:21873635
UniProtKB:O09053 (MGI:MGI:5700122|PMID:26195664)
RGD PMID:11735402, PMID:26195664, PMID:21873635 MGI:MGI:5700122, RGD:13792537 NCBI chr 1:142,246,773...142,332,616
Ensembl chr 1:142,246,790...142,332,588
JBrowse link
G Ddx11 DEAD/H-box helicase 11 ISO (PMID:26503245) RGD PMID:26503245 NCBI chr 9:114,113,642...114,133,908
Ensembl chr 9:114,111,580...114,132,492
JBrowse link
G Dhx36 DEAH-box helicase 36 ISS
ISO
GO_REF:0000024
(MGI:MGI:6201778|PMID:25611385)
(PMID:16150737), (PMID:18842585)
UniProt
RGD
PMID:16150737, PMID:18842585, PMID:25611385 GO_REF:0000024, MGI:MGI:6201778 NCBI chr 2:152,785,844...152,824,549
Ensembl chr 2:152,785,844...152,824,547
JBrowse link
G Dhx9 DExH-box helicase 9 ISO (PMID:21561811) RGD PMID:21561811 NCBI chr13:70,885,503...70,922,278
Ensembl chr13:70,885,504...70,922,245
JBrowse link
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 IDA PMID:23184978 BHF-UCL PMID:23184978 RGD:11567256 NCBI chr 4:81,237,496...81,241,281
Ensembl chr 4:81,237,496...81,241,282
JBrowse link
G Wrn WRN RecQ like helicase ISO
IBA
(PMID:11735402)
PMID:21873635
UniProtKB:O88700 (MGI:MGI:5700122|PMID:26195664)
RGD PMID:11735402, PMID:26195664, PMID:21873635 MGI:MGI:5700122, RGD:13792537 NCBI chr16:62,483,773...62,619,018
Ensembl chr16:62,483,761...62,615,375
JBrowse link
heterochromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07027368.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr17:26,772,096...26,772,732 JBrowse link
G Bahd1 bromo adjacent homology domain containing 1 ISO (PMID:19666599) RGD PMID:19666599 NCBI chr 3:110,708,790...110,732,038
Ensembl chr 3:110,723,481...110,732,060
JBrowse link
G Baz2a bromodomain adjacent to zinc finger domain, 2A ISO (MGI:MGI:3653583|PMID:16678107), (MGI:MGI:4462332|PMID:20168299) RGD PMID:16678107, PMID:20168299 MGI:MGI:3653583, MGI:MGI:4462332 NCBI chr 7:2,518,267...2,548,840
Ensembl chr 7:2,529,077...2,547,062
JBrowse link
G Ezh1 enhancer of zeste 1 polycomb repressive complex 2 subunit ISO (MGI:MGI:3820717|PMID:19026781) RGD PMID:19026781 MGI:MGI:3820717 NCBI chr10:89,104,026...89,139,978
Ensembl chr10:89,104,027...89,130,339
JBrowse link
G Hmga2 high mobility group AT-hook 2 ISO
ISS
(PMID:16901784)
GO_REF:0000024
RGD
UniProt
PMID:16901784 GO_REF:0000024 NCBI chr 7:65,159,944...65,275,408
Ensembl chr 7:65,159,944...65,275,408
JBrowse link
G LOC100362333 DNA-directed DNA polymerase epsilon 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:118,816,053...118,816,725
Ensembl chr 7:118,816,218...118,816,655
Ensembl chr 5:118,816,218...118,816,655
JBrowse link
G Pole3 DNA polymerase epsilon 3, accessory subunit IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:78,380,813...78,384,047
Ensembl chr 5:78,380,816...78,384,047
JBrowse link
G Sirt1 sirtuin 1 ISO (PMID:15469825) RGD PMID:15469825 NCBI chr20:26,831,971...26,851,587
Ensembl chr20:26,833,357...26,852,199
JBrowse link
heterochromatin assembly by small RNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fam172a family with sequence similarity 172, member A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:4,942,795...5,547,744
Ensembl chr 2:4,942,775...5,545,144
JBrowse link
G Nrde2 NRDE-2, necessary for RNA interference, domain containing IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:124,136,949...124,177,426
Ensembl chr 6:124,142,395...124,177,404
JBrowse link
G Znfx1 zinc finger, NFX1-type containing 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:163,787,101...163,847,671
Ensembl chr 3:163,787,101...163,847,671
JBrowse link
heterochromatin maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arid1a AT-rich interaction domain 1A ISO (MGI:MGI:5578697|PMID:24335282) RGD PMID:24335282 MGI:MGI:5578697 NCBI chr 5:151,904,687...151,977,973
Ensembl chr 5:151,904,684...151,977,636
JBrowse link
G Hdac2 histone deacetylase 2 ISO (PMID:19372552) RGD PMID:19372552 NCBI chr20:43,084,870...43,108,198
Ensembl chr20:43,084,870...43,108,198
JBrowse link
G Mthfr methylenetetrahydrofolate reductase ISO (PMID:24769206) RGD PMID:24769206 NCBI chr 5:164,844,642...164,864,360
Ensembl chr 5:164,845,925...164,860,910
JBrowse link
G Sirt1 sirtuin 1 ISO
IEA
(PMID:15469825)
GO_REF:0000107
RGD
Ensembl
PMID:15469825 GO_REF:0000107 NCBI chr20:26,831,971...26,851,587
Ensembl chr20:26,833,357...26,852,199
JBrowse link
G Ube2b ubiquitin-conjugating enzyme E2B ISO MGI:MGI:2183933 (MGI:MGI:3720437|PMID:17488778) RGD PMID:17488778 MGI:MGI:3720437 NCBI chr10:37,439,947...37,454,867
Ensembl chr10:37,441,284...37,455,022
JBrowse link
G Wdhd1 WD repeat and HMG-box DNA binding protein 1 ISO (MGI:MGI:5317038|PMID:21266480) RGD PMID:21266480 MGI:MGI:5317038 NCBI chr15:24,021,674...24,056,073
Ensembl chr15:24,021,674...24,056,073
JBrowse link
heterochromatin organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hp1bp3 heterochromatin protein 1, binding protein 3 IEA
ISS
ISO
GO_REF:0000002
GO_REF:0000024
(PMID:24830416)
InterPro
UniProt
RGD
PMID:24830416 GO_REF:0000002, GO_REF:0000024 NCBI chr 5:156,581,732...156,609,059
Ensembl chr 5:156,581,732...156,609,059
JBrowse link
G Loxl2 lysyl oxidase-like 2 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:24239292)
Ensembl
UniProt
RGD
PMID:24239292 GO_REF:0000024, GO_REF:0000107 NCBI chr15:51,276,022...51,365,238
Ensembl chr15:51,303,909...51,365,234
JBrowse link
G Mecom MDS1 and EVI1 complex locus ISO (MGI:MGI:6274969|PMID:22939622) RGD PMID:22939622 MGI:MGI:6274969 NCBI chr 2:117,396,084...117,993,604
Ensembl chr 2:117,396,007...117,454,769
JBrowse link
G Prdm16 PR/SET domain 16 ISO (MGI:MGI:6274969|PMID:22939622) RGD PMID:22939622 MGI:MGI:6274969 NCBI chr 5:171,662,277...171,711,561
Ensembl chr 5:171,662,277...171,710,316
JBrowse link
G Setd7 SET domain containing 7, histone lysine methyltransferase ISO (MGI:MGI:5471848|PMID:23509280)
(PMID:23509280)
RGD PMID:23509280 MGI:MGI:5471848 NCBI chr 2:140,576,188...140,618,405
Ensembl chr 2:140,576,188...140,618,405
JBrowse link
G Setdb1 SET domain bifurcated histone lysine methyltransferase 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:196,495,867...196,527,412
Ensembl chr 2:196,495,867...196,527,127
JBrowse link
G Setdb2 SET domain bifurcated histone lysine methyltransferase 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:38,699,135...39,745,035