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ONTOLOGY REPORT - ANNOTATIONS


Term:nuclear pore complex assembly
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Accession:GO:0051292 term browser browse the term
Definition:The aggregation, arrangement and bonding together of a set of components to form a nuclear pore complex.
Synonyms:exact_synonym: NPC assembly;   nuclear pore assembly;   nuclear pore biogenesis;   nuclear pore biosynthesis;   nuclear pore complex biogenesis;   nuclear pore complex biosynthesis;   nuclear pore complex formation;   nuclear pore formation


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nuclear pore complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahctf1 AT hook containing transcription factor 1 ISO (PMID:17098863) RGD PMID:17098863 NCBI chr13:98,023,528...98,079,138
Ensembl chr13:98,023,430...98,078,946
JBrowse link
G Ndc1 NDC1 transmembrane nucleoporin IEA
ISO
GO_REF:0000107
(PMID:16600873)
Ensembl
RGD
PMID:16600873 GO_REF:0000107 NCBI chr 5:126,976,636...127,022,941
Ensembl chr 5:126,976,456...127,022,939
JBrowse link
G Nup107 nucleoporin 107 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:15229283)
Ensembl
UniProt
RGD
PMID:15229283 GO_REF:0000024, GO_REF:0000107 NCBI chr 7:60,781,724...60,825,225
Ensembl chr 7:60,781,729...60,825,242
JBrowse link
G Nup153 nucleoporin 153 IEA
ISO
ISS
GO_REF:0000107
(PMID:12802065), (PMID:15229283)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:12802065, PMID:15229283 GO_REF:0000024, GO_REF:0000107 NCBI chr17:18,358,712...18,411,368
Ensembl chr17:18,358,712...18,411,368
JBrowse link
G Nup205 nucleoporin 205 ISO (PMID:15229283) RGD PMID:15229283 NCBI chr 4:62,703,779...62,773,931
Ensembl chr 4:62,703,779...62,773,923
JBrowse link
G Nup93 nucleoporin 93 ISS
ISO
GO_REF:0000024
(PMID:15229283), (PMID:26878725)
UniProt
RGD
PMID:15229283, PMID:26878725 GO_REF:0000024 NCBI chr19:11,159,769...11,263,980
Ensembl chr19:11,159,774...11,263,980
JBrowse link
G Nup98 nucleoporin 98 and 96 precursor ISO
ISS
(PMID:15229283)
GO_REF:0000024
RGD
UniProt
PMID:15229283 GO_REF:0000024 NCBI chr 1:167,213,866...167,308,851
Ensembl chr 1:167,213,866...167,308,851
JBrowse link
G Rtn4 reticulon 4 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:26906412)
Ensembl
UniProt
RGD
PMID:26906412 GO_REF:0000024, GO_REF:0000107 NCBI chr14:114,126,931...114,174,459
Ensembl chr14:114,126,943...114,174,458
JBrowse link
G Tmem170a transmembrane protein 170A ISO (PMID:26906412) RGD PMID:26906412 NCBI chr19:44,090,418...44,101,365
Ensembl chr19:44,088,612...44,101,365
JBrowse link
G Tpr translocated promoter region, nuclear basket protein NOT IMP
ISO
PMID:11839768
(PMID:12802065)
RGD PMID:12802065, PMID:11839768 RGD:8553300 NCBI chr13:67,611,685...67,672,833
Ensembl chr13:67,611,708...67,672,827
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20014
    cellular process 18788
      cellular component organization or biogenesis 6766
        cellular component organization 6510
          protein-containing complex subunit organization 1808
            nuclear pore organization 15
              nuclear pore complex assembly 10
                mitotic nuclear pore complex reassembly 0
Path 2
Term Annotations click to browse term
  biological_process 20014
    cellular process 18788
      cellular component organization or biogenesis 6766
        cellular component organization 6510
          organelle organization 4073
            nucleus organization 128
              nuclear pore organization 15
                nuclear pore complex assembly 10
                  mitotic nuclear pore complex reassembly 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.