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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of stress fiber assembly
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Accession:GO:0051492 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of the assembly of a stress fiber, a bundle of microfilaments and other proteins found in fibroblasts.
Synonyms:exact_synonym: regulation of stress fibre formation
 related_synonym: regulation of stress fibre biosynthesis


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regulation of stress fiber assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Alms1 ALMS1, centrosome and basal body associated protein JBrowse link 4 117,371,544 117,472,310 RGD:1624291
RGD:1600115
G Asap3 ArfGAP with SH3 domain, ankyrin repeat and PH domain 3 JBrowse link 5 154,551,901 154,596,125 RGD:1624291
RGD:13792537
G Bbs4 Bardet-Biedl syndrome 4 JBrowse link 8 64,115,005 64,154,432 RGD:1624291
RGD:1600115
G Cdc42 cell division cycle 42 JBrowse link 5 155,690,267 155,728,385 RGD:1624291
G Fhod1 formin homology 2 domain containing 1 JBrowse link 19 37,284,923 37,303,855 RGD:1624291
G Mkks McKusick-Kaufman syndrome JBrowse link 3 129,866,542 129,885,213 RGD:1624291
RGD:1600115
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 JBrowse link 2 31,742,326 31,826,882 RGD:1624291
RGD:1600115
G Pik3r2 phosphoinositide-3-kinase regulatory subunit 2 JBrowse link 16 20,415,109 20,424,982 RGD:1624291
RGD:1600115
G Ptger4 prostaglandin E receptor 4 JBrowse link 2 54,951,625 54,966,470 RGD:1600115
RGD:1624291
G Rac1 Rac family small GTPase 1 JBrowse link 12 13,090,316 13,111,841 RGD:1624291
G Synpo synaptopodin JBrowse link 18 55,863,081 55,921,412 RGD:1624291
G Tsc1 TSC complex subunit 1 JBrowse link 3 7,219,955 7,269,063 RGD:1624291
G Ttc8 tetratricopeptide repeat domain 8 JBrowse link 6 122,920,308 122,974,525 RGD:1624291
RGD:1600115
G Was WASP actin nucleation promoting factor JBrowse link X 15,155,246 15,164,099 RGD:1624291
negative regulation of stress fiber assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Arap1 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 JBrowse link 1 166,459,062 166,525,200 RGD:1624291
RGD:1600115
G Arhgap28 Rho GTPase activating protein 28 JBrowse link 9 116,057,229 116,222,440 RGD:1624291
RGD:13792537
G Arhgap6 Rho GTPase activating protein 6 JBrowse link X 26,314,561 26,845,242 RGD:1624291
RGD:1600115
G Clasp1 cytoplasmic linker associated protein 1 JBrowse link 13 34,365,038 34,584,651 RGD:1624291
RGD:1600115
G Clasp2 cytoplasmic linker associated protein 2 JBrowse link 8 122,003,719 122,185,495 RGD:1624291
G Coro2b coronin 2B JBrowse link 8 67,374,617 67,492,490 RGD:1624291
RGD:1600115
G Dlc1 DLC1 Rho GTPase activating protein JBrowse link 16 58,776,489 59,247,752 RGD:1600115
RGD:1624291
G Frmd7 FERM domain containing 7 JBrowse link X 138,095,707 138,149,702 RGD:1624291
RGD:1600115
G Inpp5k inositol polyphosphate-5-phosphatase K JBrowse link 10 63,775,639 63,796,879 RGD:1624291
RGD:1600115
G Met MET proto-oncogene, receptor tyrosine kinase JBrowse link 4 44,747,467 44,854,628 RGD:1600115
RGD:1624291
G Myoc myocilin JBrowse link 13 80,517,531 80,527,928 RGD:1600115
RGD:1624291
G Pfn1 profilin 1 JBrowse link 10 57,273,003 57,275,708 RGD:1624291
G Phldb2 pleckstrin homology-like domain, family B, member 2 JBrowse link 11 60,042,879 60,051,229 RGD:1624291
G Ppfia1 PTPRF interacting protein alpha 1 JBrowse link 1 217,644,259 217,721,285 RGD:1624291
G Ppp1r9a protein phosphatase 1, regulatory subunit 9A JBrowse link 4 29,976,485 30,247,371 RGD:1299363
G S1pr1 sphingosine-1-phosphate receptor 1 JBrowse link 2 218,654,406 218,658,761 RGD:1581790
G Stmn1 stathmin 1 JBrowse link 5 152,680,412 152,686,807 RGD:1624291
RGD:1600115
G Tacstd2 tumor-associated calcium signal transducer 2 JBrowse link 4 98,341,187 98,342,887 RGD:1600115
RGD:1624291
G Tmeff2 transmembrane protein with EGF-like and two follistatin-like domains 2 JBrowse link 9 55,379,130 55,673,704 RGD:1624291
RGD:1600115
G Tmsb15b2 thymosin beta 15B2 JBrowse link X 107,612,518 107,614,632 RGD:1624291
G Was WASP actin nucleation promoting factor JBrowse link X 15,155,246 15,164,099 RGD:1624291
RGD:1600115
G Wasf2 WASP family member 2 JBrowse link 5 151,319,382 151,385,051 RGD:1624291
RGD:1600115
positive regulation of stress fiber assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase JBrowse link 3 10,041,820 10,145,076 RGD:1624291
G Apoa1 apolipoprotein A1 JBrowse link 8 50,525,091 50,526,875 RGD:1624291
RGD:1600115
G Arhgef10 Rho guanine nucleotide exchange factor 10 JBrowse link 16 79,725,629 79,817,065 RGD:1624291
RGD:13792537
G Arhgef10l Rho guanine nucleotide exchange factor 10 like JBrowse link 5 159,018,373 159,089,383 RGD:1624291
G Arhgef15 Rho guanine nucleotide exchange factor 15 JBrowse link 10 55,532,097 55,545,675 RGD:8554375
G Arhgef5 Rho guanine nucleotide exchange factor 5 JBrowse link 4 72,710,775 72,736,415 RGD:1624291
RGD:1600115
G Bag4 BCL2-associated athanogene 4 JBrowse link 16 71,057,709 71,075,874 RGD:1624291
G Braf B-Raf proto-oncogene, serine/threonine kinase JBrowse link 4 67,389,331 67,520,549 RGD:1624291
RGD:1600115
G Carmil1 capping protein regulator and myosin 1 linker 1 JBrowse link 17 43,050,282 43,339,403 RGD:1624291
RGD:1600115
G Ccn2 cellular communication network factor 2 JBrowse link 1 21,851,657 21,854,773 RGD:1624291
RGD:1600115
G Cd47 Cd47 molecule JBrowse link 11 53,511,485 53,575,754 RGD:625650
G Cdc42 cell division cycle 42 JBrowse link 5 155,690,267 155,728,385 RGD:1624291
G Epha1 Eph receptor A1 JBrowse link 4 71,749,100 71,763,681 RGD:1624291
RGD:1600115
G Evl Enah/Vasp-like JBrowse link 6 132,470,283 132,590,242 RGD:1624291
RGD:1600115
G Fhod1 formin homology 2 domain containing 1 JBrowse link 19 37,284,923 37,303,855 RGD:1624291
RGD:1600115
G Gpr65 G-protein coupled receptor 65 JBrowse link 6 122,248,528 122,256,115 RGD:1624291
RGD:1600115
G Itgb1bp1 integrin subunit beta 1 binding protein 1 JBrowse link 6 43,348,927 43,363,633 RGD:1624291
RGD:1600115
G Kiss1r KISS1 receptor JBrowse link 7 12,606,210 12,609,868 RGD:1357971
G Limch1 LIM and calponin homology domains 1 JBrowse link 14 42,760,363 43,072,976 RGD:1624291
G Limk1 LIM domain kinase 1 JBrowse link 12 25,036,630 25,070,538 RGD:1624291
RGD:13792537
RGD:1600115
G LOC100909840 profilin-2-like JBrowse link 2 148,044,714 148,050,464 RGD:1600115
G Lpar1 lysophosphatidic acid receptor 1 JBrowse link 5 75,557,038 75,678,067 RGD:1624291
RGD:1600115
G Mtor mechanistic target of rapamycin kinase JBrowse link 5 165,263,813 165,373,967 RGD:1624291
RGD:1600115
G Myoc myocilin JBrowse link 13 80,517,531 80,527,928 RGD:1600115
RGD:1624291
G Nf2 neurofibromin 2 JBrowse link 14 84,996,905 85,088,547 RGD:1624291
RGD:1600115
G Nox4 NADPH oxidase 4 JBrowse link 1 150,796,359 150,976,186 RGD:2324670
G Nrp1 neuropilin 1 JBrowse link 19 61,332,351 61,486,166 RGD:1624291
RGD:1600115
G Pak1 p21 (RAC1) activated kinase 1 JBrowse link 1 162,768,156 162,883,356 RGD:1624291
RGD:1600115
G Pdlim4 PDZ and LIM domain 4 JBrowse link 10 39,390,578 39,405,322 RGD:1300470
RGD:13432282
G Pfn1 profilin 1 JBrowse link 10 57,273,003 57,275,708 RGD:2324854
G Pfn2 profilin 2 JBrowse link 2 147,953,858 147,959,692 RGD:1600115
RGD:1624291
G Ppm1e protein phosphatase, Mg2+/Mn2+ dependent, 1E JBrowse link 10 74,548,270 74,679,858 RGD:1624291
RGD:1600115
G Ppm1f protein phosphatase, Mg2+/Mn2+ dependent, 1F JBrowse link 11 88,313,709 88,343,726 RGD:1600115
RGD:1624291
G Prkcq protein kinase C, theta JBrowse link 17 70,971,915 71,105,286 RGD:1625621
G Pxn paxillin JBrowse link 12 46,797,953 46,845,107 RGD:1624291
RGD:1600115
G Rac1 Rac family small GTPase 1 JBrowse link 12 13,090,316 13,111,841 RGD:1624291
RGD:1600115
G Rapgef3 Rap guanine nucleotide exchange factor 3 JBrowse link 7 139,232,263 139,254,668 RGD:1624291
RGD:1600115
G Rgcc regulator of cell cycle JBrowse link 15 61,551,861 61,564,695 RGD:1624291
RGD:1600115
G Rhoa ras homolog family member A JBrowse link 8 117,082,440 117,116,244 RGD:1624291
RGD:1600115
G Rhoc ras homolog family member C JBrowse link 2 207,271,692 207,278,010 RGD:1624291
RGD:1600115
G Rock2 Rho-associated coiled-coil containing protein kinase 2 JBrowse link 6 42,180,864 42,289,910 RGD:1600115
RGD:1624291
G S100a10 S100 calcium binding protein A10 JBrowse link 2 193,892,589 193,901,236 RGD:1624291
RGD:1600115
G Sdc4 syndecan 4 JBrowse link 3 160,872,503 160,891,190 RGD:2312327
G Serpinf2 serpin family F member 2 JBrowse link 10 62,264,247 62,272,353 RGD:1624291
RGD:1600115
G Sh3pxd2b SH3 and PX domains 2B JBrowse link 10 17,209,152 17,296,449 RGD:1624291
RGD:1600115
G Smad3 SMAD family member 3 JBrowse link 8 68,569,530 68,678,349 RGD:2300418
G Sorbs3 sorbin and SH3 domain containing 3 JBrowse link 15 51,859,004 51,895,707 RGD:1624291
RGD:1600115
G Synpo2l synaptopodin 2-like JBrowse link 15 4,064,706 4,074,151 RGD:1624291
G Tac1 tachykinin, precursor 1 JBrowse link 4 33,638,853 33,646,819 RGD:2304338
G Tacr1 tachykinin receptor 1 JBrowse link 4 113,247,236 113,416,139 RGD:2304338
G Tesk1 testis associated actin remodelling kinase 1 JBrowse link 5 58,937,615 58,943,358 RGD:13461749
RGD:13792537
G Tgfb3 transforming growth factor, beta 3 JBrowse link 6 109,913,757 109,936,217 RGD:1624291
RGD:1600115
G Tgfbr1 transforming growth factor, beta receptor 1 JBrowse link 5 63,056,071 63,119,635 RGD:1624291
G Tpm1 tropomyosin 1 JBrowse link 8 72,814,737 72,841,496 RGD:8656006
G Tsc1 TSC complex subunit 1 JBrowse link 3 7,219,955 7,269,063 RGD:1601406
G Wnt11 Wnt family member 11 JBrowse link 1 163,794,136 163,813,756 RGD:1624291
RGD:1600115
G Wnt4 Wnt family member 4 JBrowse link 5 155,649,238 155,668,065 RGD:1624291
RGD:1600115

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17941
    regulation of biological process 11967
      regulation of cellular component biogenesis 975
        regulation of actin filament bundle assembly 103
          regulation of stress fiber assembly 86
            negative regulation of stress fiber assembly 22
            positive regulation of stress fiber assembly 57
Path 2
Term Annotations click to browse term
  biological_process 17941
    cellular process 16091
      cellular component organization 6069
        organelle organization 3662
          cytoskeleton organization 1330
            actin cytoskeleton organization 670
              actin filament organization 402
                actin filament bundle organization 174
                  actin filament bundle assembly 171
                    contractile actin filament bundle assembly 103
                      stress fiber assembly 103
                        regulation of stress fiber assembly 86
                          negative regulation of stress fiber assembly 22
                          positive regulation of stress fiber assembly 57
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.