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ONTOLOGY REPORT - ANNOTATIONS


Term:defense response to virus
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Accession:GO:0051607 term browser browse the term
Definition:Reactions triggered in response to the presence of a virus that act to protect the cell or organism.
Synonyms:exact_synonym: antiviral response;   defence response to virus;   defense response to viruses


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defense response to virus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc9 ATP binding cassette subfamily C member 9 ISO (PMID:18026101) MGI PMID:18026101 NCBI chrNW_004955413:17,385,966...17,510,220 JBrowse link
G Acod1 aconitate decarboxylase 1 ISO (MGI:MGI:6357088|PMID:30635240) UniProt PMID:30635240 MGI:MGI:6357088 NCBI chrNW_004955404:30,254,934...30,266,898 JBrowse link
G Adar adenosine deaminase RNA specific ISO (MGI:MGI:4939544|PMID:21173229) MGI PMID:21173229 MGI:MGI:4939544 NCBI chrNW_004955545:1,078,319...1,106,938 JBrowse link
G Agbl4 ATP/GTP binding protein like 4 ISO (MGI:MGI:5770179|PMID:26829768) UniProtKB PMID:26829768 MGI:MGI:5770179 NCBI chrNW_004955464:8,847,401...10,195,184 JBrowse link
G Agbl5 ATP/GTP binding protein like 5 ISO (MGI:MGI:5770179|PMID:26829768) UniProtKB PMID:26829768 MGI:MGI:5770179 NCBI chrNW_004955469:9,023,753...9,041,674 JBrowse link
G Aimp1 aminoacyl tRNA synthetase complex interacting multifunctional protein 1 ISO RGD PMID:12633891 RGD:1580022 NCBI chrNW_004955496:3,073,480...3,108,012 JBrowse link
G Apobec1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 ISO RGD PMID:15296758 RGD:1626281 NCBI chrNW_004955413:6,471,933...6,480,475 JBrowse link
G Atg7 autophagy related 7 ISO (PMID:23290079) CACAO PMID:23290079 NCBI chrNW_004955429:14,076,976...14,301,034 JBrowse link
G Bcl2 BCL2 apoptosis regulator ISO (PMID:10620603) UniProtKB PMID:10620603 NCBI chrNW_004955402:46,911,125...47,084,214 JBrowse link
G Bcl2l1 BCL2 like 1 ISO (PMID:17428862) DIBU PMID:17428862 NCBI chrNW_004955422:29,254,440...29,307,104 JBrowse link
G Bnip3 BCL2 interacting protein 3 ISO (PMID:9973195) UniProtKB PMID:9973195 NCBI chrNW_004955477:9,621,812...9,630,406 JBrowse link
G Bnip3l BCL2 interacting protein 3 like ISO (PMID:9973195) UniProtKB PMID:9973195 NCBI chrNW_004955403:49,122,408...49,144,162 JBrowse link
G Bpifa1 BPI fold containing family A member 1 ISO (PMID:21805676) UniProtKB PMID:21805676 NCBI chrNW_004955422:28,063,077...28,069,939 JBrowse link
G Card9 caspase recruitment domain family member 9 ISO (MGI:MGI:3697751|PMID:17187069) MGI PMID:17187069 MGI:MGI:3697751 NCBI chrNW_004955513:4,350,873...4,359,345 JBrowse link
G Cd207 CD207 molecule ISO (PMID:17334373) UniProtKB PMID:17334373 NCBI chrNW_004955424:14,355,739...14,361,326 JBrowse link
G Cd40 CD40 molecule ISO (MGI:MGI:3829555|PMID:17277142) MGI PMID:17277142 MGI:MGI:3829555 NCBI chrNW_004955445:11,191,817...11,202,156 JBrowse link
G Cd86 CD86 molecule ISO (MGI:MGI:3829555|PMID:17277142) RGD
MGI
PMID:17277142, PMID:20603637 MGI:MGI:3829555, RGD:4892200 NCBI chrNW_004955427:21,375,820...21,436,767 JBrowse link
G Cd8a CD8a molecule ISO (MGI:MGI:3829555|PMID:17277142) MGI PMID:17277142 MGI:MGI:3829555 NCBI chrNW_004955424:952,595...979,159 JBrowse link
G Cgas cyclic GMP-AMP synthase ISO (PMID:21478870), (PMID:23929945), (PMID:24077100), (PMID:26046437)
(MGI:MGI:5505711|PMID:23929945), (MGI:MGI:5908326|PMID:24077100)
UniProtKB PMID:21478870, PMID:23929945, PMID:24077100, PMID:26046437 MGI:MGI:5505711, MGI:MGI:5908326 NCBI chrNW_004955493:8,593,104...8,607,297 JBrowse link
G Chuk component of inhibitor of nuclear factor kappa B kinase complex ISO (MGI:MGI:5583923|PMID:24784232) CAFA PMID:24784232 MGI:MGI:5583923 NCBI chrNW_004955507:6,066,026...6,102,066 JBrowse link
G Cnot7 CCR4-NOT transcription complex subunit 7 ISO (PMID:23386060) UniProtKB PMID:23386060 NCBI chrNW_004955463:285,228...306,077 JBrowse link
G Cxadr CXADR Ig-like cell adhesion molecule ISO (PMID:14978041) UniProtKB PMID:14978041 NCBI chrNW_004955407:18,894,853...18,927,129 JBrowse link
G Cxcl10 C-X-C motif chemokine ligand 10 ISO (MGI:MGI:3829555|PMID:17277142) MGI PMID:17277142 MGI:MGI:3829555 NCBI chrNW_004955433:748,392...750,890 JBrowse link
G Cxcl9 C-X-C motif chemokine ligand 9 ISO (MGI:MGI:3829555|PMID:17277142) MGI PMID:17277142 MGI:MGI:3829555 NCBI chrNW_004955433:724,566...731,945 JBrowse link
G Ddit4 DNA damage inducible transcript 4 ISO (PMID:21478870) UniProtKB PMID:21478870 NCBI chrNW_004955437:19,322,407...19,324,562 JBrowse link
G Ddx41 DEAD-box helicase 41 ISO (MGI:MGI:5291856|PMID:21892174) MGI PMID:21892174 MGI:MGI:5291856 NCBI chrNW_004955408:29,748,091...29,753,610 JBrowse link
G Ddx58 DExD/H-box helicase 58 ISO (PMID:21478870) UniProtKB PMID:21478870 NCBI chrNW_004955472:3,093,895...3,135,524 JBrowse link
G Ddx60 DExD/H-box helicase 60 ISO (MGI:MGI:5287305|PMID:21791617) MGI PMID:21791617 MGI:MGI:5287305 NCBI chrNW_004955403:37,679,939...37,765,074 JBrowse link
G Dicer1 dicer 1, ribonuclease III ISO (MGI:MGI:3718936|PMID:17613256) MGI PMID:17613256 MGI:MGI:3718936 NCBI chrNW_004955438:17,374,899...17,431,599 JBrowse link
G Exosc4 exosome component 4 ISO (PMID:21791617) MGI PMID:21791617 NCBI chrNW_004955454:2,732,308...2,734,398 JBrowse link
G Exosc5 exosome component 5 ISO (PMID:21791617) MGI PMID:21791617 NCBI chrNW_004955555:328,130...334,106 JBrowse link
G F2rl1 F2R like trypsin receptor 1 ISO (MGI:MGI:3848267|PMID:19494303)
(PMID:18453611), (PMID:19494303)
UniProtKB PMID:18453611, PMID:19494303 MGI:MGI:3848267 NCBI chrNW_004955425:24,050,901...24,054,039 JBrowse link
G Fadd Fas associated via death domain ISO (PMID:21109225) UniProtKB PMID:21109225 NCBI chrNW_004955422:16,026,323...16,035,808 JBrowse link
G Fcn3 ficolin 3 ISO (PMID:22851708) UniProtKB PMID:22851708 NCBI chrNW_004955452:6,630,548...6,635,334 JBrowse link
G G3bp1 G3BP stress granule assembly factor 1 ISO (PMID:30510222) UniProt PMID:30510222 NCBI chrNW_004955408:6,197,988...6,223,135 JBrowse link
G Gpam glycerol-3-phosphate acyltransferase, mitochondrial ISO (MGI:MGI:3837643|PMID:19193813) MGI PMID:19193813 MGI:MGI:3837643 NCBI chrNW_004955431:17,291,890...17,363,611 JBrowse link
G Hyal2 hyaluronidase 2 ISO (MGI:MGI:5315349|PMID:16191204) UniProtKB PMID:16191204 MGI:MGI:5315349 NCBI chrNW_004955532:2,120,781...2,125,083 JBrowse link
G Ifi16 interferon gamma inducible protein 16 ISO (PMID:21478870)
(PMID:21575908)
UniProtKB PMID:21478870, PMID:21575908 NCBI chrNW_004955468:10,828,726...10,845,853 JBrowse link
G Ifih1 interferon induced with helicase C domain 1 ISO (PMID:21478870) UniProtKB PMID:21478870 NCBI chrNW_004955449:11,538,869...11,596,502 JBrowse link
G Ifit5 interferon induced protein with tetratricopeptide repeats 5 ISO (PMID:23334420) UniProtKB PMID:23334420 NCBI chrNW_004955425:3,569,448...3,575,043 JBrowse link
G Ifnar1 interferon alpha and beta receptor subunit 1 ISO (MGI:MGI:3829555|PMID:17277142), (MGI:MGI:5792628|PMID:27129230) MGI PMID:17277142, PMID:27129230 MGI:MGI:3829555, MGI:MGI:5792628 NCBI chrNW_004955407:32,730,973...32,755,404 JBrowse link
G Ifnar2 interferon alpha and beta receptor subunit 2 ISO (PMID:26424569) UniProtKB PMID:26424569 NCBI chrNW_004955407:32,601,862...32,637,852 JBrowse link
G Ifnb1 interferon beta 1 ISO (MGI:MGI:5792628|PMID:27129230)
(MGI:MGI:3829555|PMID:17277142)
UniProt
MGI
PMID:17277142, PMID:27129230 MGI:MGI:3829555, MGI:MGI:5792628 NCBI chrNW_004955434:23,301,623...23,302,304 JBrowse link
G Ifne interferon epsilon ISO (MGI:MGI:5493380|PMID:23449591) UniProtKB PMID:23449591 MGI:MGI:5493380 NCBI chrNW_004955472:12,795,352...12,801,035 JBrowse link
G Ifng interferon gamma ISO (MGI:MGI:4431293|PMID:20064371), (MGI:MGI:5644636|PMID:25268627)
(MGI:MGI:5644636|PMID:25268627)
MGI PMID:20064371, PMID:25268627 MGI:MGI:4431293, MGI:MGI:5644636 NCBI chrNW_004955458:14,643,333...14,648,020 JBrowse link
G Ifngr1 interferon gamma receptor 1 ISO (MGI:MGI:5644636|PMID:25268627) MGI PMID:25268627 MGI:MGI:5644636 NCBI chrNW_004955436:22,183,318...22,199,013 JBrowse link
G Ifngr2 interferon gamma receptor 2 ISO (MGI:MGI:5644636|PMID:25268627) MGI PMID:25268627 MGI:MGI:5644636 NCBI chrNW_004955407:32,846,927...32,863,155 JBrowse link
G Ifnlr1 interferon lambda receptor 1 ISO (MGI:MGI:5009066|PMID:21518880)
(MGI:MGI:3774908|PMID:18250457)
UniProtKB
MGI
PMID:18250457, PMID:21518880 MGI:MGI:3774908, MGI:MGI:5009066 NCBI chrNW_004955452:4,002,389...4,028,193 JBrowse link
G Il12b interleukin 12B ISO (MGI:MGI:3829555|PMID:17277142) MGI PMID:17277142 MGI:MGI:3829555 NCBI chrNW_004955408:13,302,506...13,316,300 JBrowse link
G Il33 interleukin 33 ISO (MGI:MGI:5543337|PMID:23630360) MGI PMID:23630360 MGI:MGI:5543337 NCBI chrNW_004955434:10,145,449...10,187,595 JBrowse link
G Il6 interleukin 6 ISO (PMID:3023045) BHF-UCL PMID:3023045 NCBI chrNW_004955410:25,079,835...25,084,390 JBrowse link
G Irf1 interferon regulatory factor 1 ISO (PMID:21389130), (PMID:21478870)
(MGI:MGI:4881394|PMID:20451243), (MGI:MGI:6357088|PMID:30635240)
UniProtKB
UniProt
PMID:20451243, PMID:21389130, PMID:21478870, PMID:30635240 MGI:MGI:4881394, MGI:MGI:6357088 NCBI chrNW_004955408:3,882,282...3,887,965 JBrowse link
G Irf2 interferon regulatory factor 2 ISO (PMID:21478870) UniProtKB PMID:21478870 NCBI chrNW_004955403:24,433,334...24,517,618 JBrowse link
G Irf3 interferon regulatory factor 3 ISO (MGI:MGI:4365354|PMID:18562536), (MGI:MGI:4881394|PMID:20451243), (MGI:MGI:5792628|PMID:27129230)
(MGI:MGI:5502260|PMID:23770239)
UniProt
MGI
PMID:18562536, PMID:20451243, PMID:23770239, PMID:27129230 MGI:MGI:4365354, MGI:MGI:4881394, MGI:MGI:5502260, MGI:MGI:5792628 NCBI chrNW_004955559:1,223,986...1,228,671 JBrowse link
G Irf7 interferon regulatory factor 7 ISO (PMID:21478870)
(MGI:MGI:5792628|PMID:27129230)
UniProtKB
UniProt
PMID:21478870, PMID:27129230 MGI:MGI:5792628 NCBI chrNW_004955476:11,442,781...11,445,706 JBrowse link
G Isg15 ISG15 ubiquitin like modifier ISO (MGI:MGI:3702368|PMID:17227866)
(PMID:19357168)
UniProtKB PMID:17227866, PMID:19357168 MGI:MGI:3702368 NCBI chrNW_004955486:9,706,878...9,707,876 JBrowse link
G Isg20 interferon stimulated exonuclease gene 20 ISO (PMID:21036379) UniProtKB PMID:21036379 NCBI chrNW_004955416:16,305,534...16,321,596 JBrowse link
G Itgax integrin subunit alpha X ISO (MGI:MGI:3829555|PMID:17277142) MGI PMID:17277142 MGI:MGI:3829555 NCBI chrNW_004955493:8,196,593...8,220,296 JBrowse link
G Kcnj8 potassium inwardly rectifying channel subfamily J member 8 ISO (MGI:MGI:3761841|PMID:18026101) MGI PMID:18026101 MGI:MGI:3761841 NCBI chrNW_004955413:17,364,447...17,371,255 JBrowse link
G Lsm14a LSM14A mRNA processing body assembly factor ISO (MGI:MGI:5432265|PMID:22745163) MGI PMID:22745163 MGI:MGI:5432265 NCBI chrNW_004955468:3,799,897...3,863,241 JBrowse link
G Lyst lysosomal trafficking regulator ISO (MGI:MGI:55120|PMID:6272291) MGI PMID:6272291 MGI:MGI:55120 NCBI chrNW_004955492:4,161,976...4,371,637 JBrowse link
G Map3k14 mitogen-activated protein kinase kinase kinase 14 ISO (PMID:21478870) UniProtKB PMID:21478870 NCBI chrNW_004955451:17,907,800...17,954,821 JBrowse link
G Mavs mitochondrial antiviral signaling protein ISO (PMID:20451243) UniProtKB PMID:20451243 NCBI chrNW_004955415:14,691,918...14,704,782 JBrowse link
G Mlkl mixed lineage kinase domain like pseudokinase ISO (MGI:MGI:6434626|PMID:32296175), (MGI:MGI:6436412|PMID:32200799)
(MGI:MGI:6436434|PMID:27321907)
UniProt PMID:27321907, PMID:32200799, PMID:32296175 MGI:MGI:6434626, MGI:MGI:6436412, MGI:MGI:6436434 NCBI chrNW_004955484:2,793,092...2,819,481 JBrowse link
G Mov10 Mov10 RISC complex RNA helicase ISO (PMID:27974568) UniProt PMID:27974568 NCBI chrNW_004955435:16,093,471...16,114,735 JBrowse link
G Ncbp3 nuclear cap binding subunit 3 ISO (PMID:26382858) UniProtKB PMID:26382858 NCBI chrNW_004955467:13,011,755...13,043,161 JBrowse link
G Nlrc5 NLR family CARD domain containing 5 ISO (PMID:20061403) UniProtKB PMID:20061403 NCBI chrNW_004955433:14,670,273...14,752,739 JBrowse link
G Nlrp3 NLR family pyrin domain containing 3 ISO (MGI:MGI:3697006|PMID:17008311) MGI PMID:17008311 MGI:MGI:3697006 NCBI chrNW_004955581:597,952...616,903 JBrowse link
G Nt5c3a 5'-nucleotidase, cytosolic IIIA ISO (PMID:21478870) UniProtKB PMID:21478870 NCBI chrNW_004955617:240,132...293,278 JBrowse link
G Oas2 2'-5'-oligoadenylate synthetase 2 ISO (MGI:MGI:6094812|PMID:29117179) UniProtKB PMID:29117179 MGI:MGI:6094812 NCBI chrNW_004955482:9,365,400...9,386,314 JBrowse link
G Oas3 2'-5'-oligoadenylate synthetase 3 ISO (PMID:19923450) UniProtKB PMID:19923450 NCBI chrNW_004955482:9,339,174...9,359,266 JBrowse link
G Oasl 2'-5'-oligoadenylate synthetase like ISO (PMID:21478870) UniProtKB PMID:21478870 NCBI chrNW_004955455:10,658,080...10,682,493 JBrowse link
G Oprk1 opioid receptor kappa 1 ISO (PMID:8755601) UniProtKB PMID:8755601 NCBI chrNW_004955454:12,741,577...12,751,282 JBrowse link
G Pla2g10 phospholipase A2 group X ISO (PMID:16146426) UniProt PMID:16146426 NCBI chrNW_004955442:4,208,497...4,225,893 JBrowse link
G Plscr1 phospholipid scramblase 1 ISO (MGI:MGI:5284800|PMID:15308695)
(PMID:15308695)
UniProtKB PMID:15308695 MGI:MGI:5284800 NCBI chrNW_004955474:10,953,381...10,989,100 JBrowse link
G Pmaip1 phorbol-12-myristate-13-acetate-induced protein 1 ISO (PMID:15705586) BHF-UCL PMID:15705586 NCBI chrNW_004955402:44,005,517...44,010,722 JBrowse link
G Pqbp1 polyglutamine binding protein 1 ISO (PMID:26046437) UniProtKB PMID:26046437 NCBI chrNW_004955543:430,324...434,205 JBrowse link
G Prf1 perforin 1 ISO (MGI:MGI:66009|PMID:8164737) UniProtKB PMID:8164737 MGI:MGI:66009 NCBI chrNW_004955437:20,700,912...20,705,076 JBrowse link
G Ptprc protein tyrosine phosphatase receptor type C ISO (MGI:MGI:61371|PMID:8334701)
(MGI:MGI:3829555|PMID:17277142)
UniProtKB
MGI
PMID:8334701, PMID:17277142 MGI:MGI:3829555, MGI:MGI:61371 NCBI chrNW_004955406:35,005,577...35,127,395 JBrowse link
G Ripk3 receptor interacting serine/threonine kinase 3 ISO (MGI:MGI:6357088|PMID:30635240), (MGI:MGI:6434626|PMID:32296175), (MGI:MGI:6436371|PMID:22423968), (MGI:MGI:6436412|PMID:32200799)
(MGI:MGI:6436434|PMID:27321907), (MGI:MGI:6436445|PMID:27746097), (MGI:MGI:6442612|PMID:27917412)
UniProt PMID:22423968, PMID:27321907, PMID:27746097, PMID:27917412, PMID:30635240, PMID:32200799, PMID:32296175 MGI:MGI:6357088, MGI:MGI:6434626, MGI:MGI:6436371, MGI:MGI:6436412, MGI:MGI:6436434, MGI:MGI:6436445, MGI:MGI:6442612 NCBI chrNW_004955409:35,961,604...35,965,477 JBrowse link
G Rnase6 ribonuclease A family member k6 NOT ISO (PMID:9826755) UniProtKB PMID:9826755 NCBI chrNW_004955550:1,687,068...1,688,160 JBrowse link
G Rnasel ribonuclease L ISO (PMID:19923450) UniProtKB PMID:19923450 NCBI chrNW_004955406:21,413,950...21,424,860 JBrowse link
G Rsad2 radical S-adenosyl methionine domain containing 2 ISO (PMID:16108059), (PMID:16982913), (PMID:9391139)
(MGI:MGI:3765256|PMID:17686841)
UniProtKB PMID:9391139, PMID:16108059, PMID:16982913, PMID:17686841 MGI:MGI:3765256 NCBI chrNW_004955487:1,988,226...2,001,731 JBrowse link
G Rtp4 receptor transporter protein 4 ISO (PMID:21478870) UniProtKB PMID:21478870 NCBI chrNW_004955420:20,435,924...20,459,440 JBrowse link
G Samhd1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 NOT ISO (PMID:23601106), (PMID:26294762)
(MGI:MGI:5521417|PMID:23972988), (MGI:MGI:5828027|PMID:27920203)
(MGI:MGI:5828027|PMID:27920203)
(PMID:19525956)
UniProtKB
MGI
PMID:19525956, PMID:23601106, PMID:23972988, PMID:26294762, PMID:27920203 MGI:MGI:5521417, MGI:MGI:5828027 NCBI chrNW_004955422:24,714,103...24,780,672 JBrowse link
G Serinc3 serine incorporator 3 ISO (PMID:26416733), (PMID:26416734) UniProtKB PMID:26416733, PMID:26416734 NCBI chrNW_004955445:12,837,616...12,868,631 JBrowse link
G Serinc5 serine incorporator 5 ISO (PMID:26416733), (PMID:26416734) UniProtKB PMID:26416733, PMID:26416734 NCBI chrNW_004955418:29,502,562...29,573,966 JBrowse link
G Setd2 SET domain containing 2, histone lysine methyltransferase ISO (PMID:28753426) UniProtKB PMID:28753426 NCBI chrNW_004955420:25,070,626...25,178,410 JBrowse link
G Shfl shiftless antiviral inhibitor of ribosomal frameshifting ISO (PMID:26735137)
(PMID:27974568)
UniProtKB
UniProt
PMID:26735137, PMID:27974568 NCBI chrNW_004955495:1,431,677...1,437,035 JBrowse link
G Skp2 S-phase kinase associated protein 2 ISO (PMID:27194766) UniProt PMID:27194766 NCBI chrNW_004955426:20,972,663...20,999,769 JBrowse link
G Slfn11 schlafen family member 11 ISO (PMID:23000900) UniProtKB PMID:23000900 NCBI chrNW_004955481:9,885,798...9,900,330 JBrowse link
G Spon2 spondin 2 ISO (MGI:MGI:2686801|PMID:14691481) MGI PMID:14691481 MGI:MGI:2686801 NCBI chrNW_004955514:598,840...603,390 JBrowse link
G Stat1 signal transducer and activator of transcription 1 ISO (PMID:28753426) UniProtKB PMID:28753426 NCBI chrNW_004955403:8,156,660...8,192,018 JBrowse link
G Stat2 signal transducer and activator of transcription 2 ISO (PMID:23391734) UniProtKB PMID:23391734 NCBI chrNW_004955458:3,953,019...3,973,151 JBrowse link
G Sting1 stimulator of interferon response cGAMP interactor 1 ISO (PMID:21074459), (PMID:25254379)
(MGI:MGI:4365649|PMID:19776740), (MGI:MGI:5291856|PMID:21892174)
UniProtKB
MGI
PMID:19776740, PMID:21074459, PMID:21892174, PMID:25254379 MGI:MGI:4365649, MGI:MGI:5291856 NCBI chrNW_004955418:1,091,022...1,097,064 JBrowse link
G Tagap T cell activation RhoGTPase activating protein ISO (MGI:MGI:5644636|PMID:25268627) MGI PMID:25268627 MGI:MGI:5644636 NCBI chrNW_004955439:3,479,041...3,488,403 JBrowse link
G Ticam1 toll like receptor adaptor molecule 1 ISO (MGI:MGI:2670551|PMID:12872135) MGI PMID:12872135 MGI:MGI:2670551 NCBI chrNW_004955495:4,197,083...4,204,999 JBrowse link
G Ticam2 toll like receptor adaptor molecule 2 ISO (MGI:MGI:5644636|PMID:25268627) MGI PMID:25268627 MGI:MGI:5644636 NCBI chrNW_004955411:31,010,373...31,042,321 JBrowse link
G Tlr3 toll like receptor 3 ISO (MGI:MGI:3774908|PMID:18250457) MGI PMID:18250457 MGI:MGI:3774908 NCBI chrNW_004955403:22,977,882...23,001,392 JBrowse link
G Tlr7 toll like receptor 7 ISO (PMID:16188996)
(MGI:MGI:3042320|PMID:14976261)
UniProtKB PMID:14976261, PMID:16188996 MGI:MGI:3042320 NCBI chrNW_004955544:424,897...443,562 JBrowse link
G Tlr8 toll like receptor 8 ISO (PMID:16188996) UniProtKB PMID:16188996 NCBI chrNW_004955544:302,027...317,110 JBrowse link
G Tlr9 toll like receptor 9 ISO autoimmune diabetes-causing parvovirus Kilham rat virus
(MGI:MGI:3774908|PMID:18250457)
RGD
MGI
PMID:17202329, PMID:18250457 MGI:MGI:3774908, RGD:2301335 NCBI chrNW_004955532:3,828,645...3,832,699 JBrowse link
G Trex1 three prime repair exonuclease 1 ISO (MGI:MGI:4848004|PMID:20871604)
(MGI:MGI:5460923|PMID:23160154)
MGI PMID:20871604, PMID:23160154 MGI:MGI:4848004, MGI:MGI:5460923 NCBI chrNW_004955532:533,877...535,767 JBrowse link
G Trim56 tripartite motif containing 56 ISO (MGI:MGI:4849871|PMID:21074459) UniProtKB PMID:21074459 MGI:MGI:4849871 NCBI chrNW_004955456:16,181,890...16,185,598 JBrowse link
G Ttc4 tetratricopeptide repeat domain 4 ISO (PMID:29251827) UniProt PMID:29251827 NCBI chrNW_004955464:4,629,061...4,669,054 JBrowse link
G Unc13d unc-13 homolog D ISO (MGI:MGI:3703574|PMID:17420270) MGI PMID:17420270 MGI:MGI:3703574 NCBI chrNW_004955506:6,407,073...6,423,406 JBrowse link
G Zbp1 Z-DNA binding protein 1 ISO (PMID:32200799)
(MGI:MGI:6394181|PMID:31630209), (MGI:MGI:6434626|PMID:32296175), (MGI:MGI:6442612|PMID:27917412)
(MGI:MGI:5927398|PMID:28607035), (MGI:MGI:6095612|PMID:29073079), (MGI:MGI:6357088|PMID:30635240), (MGI:MGI:6436371|PMID:22423968), (MGI:MGI:6436393|PMID:30050136), (MGI:MGI:6436412|PMID:32200799), (MGI:MGI:6436445|PMID:27746097)
UniProt PMID:22423968, PMID:27746097, PMID:27917412, PMID:28607035, PMID:29073079, PMID:30050136, PMID:30635240, PMID:31630209, PMID:32200799, PMID:32296175 MGI:MGI:5927398, MGI:MGI:6095612, MGI:MGI:6357088, MGI:MGI:6394181, MGI:MGI:6434626, MGI:MGI:6436371, MGI:MGI:6436393, MGI:MGI:6436412, MGI:MGI:6436445, MGI:MGI:6442612 NCBI chrNW_004955445:1,867,436...1,878,132 JBrowse link
G Zcchc3 zinc finger CCHC-type containing 3 ISO (MGI:MGI:6209107|PMID:30135424), (MGI:MGI:6271678|PMID:30193849) UniProt PMID:30135424, PMID:30193849 MGI:MGI:6209107, MGI:MGI:6271678 NCBI chrNW_004955597:194,912...197,697 JBrowse link
G Zmynd11 zinc finger MYND-type containing 11 ISO (PMID:26845565) UniProtKB PMID:26845565 NCBI chrNW_004955492:775,501...879,051 JBrowse link
antiviral innate immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap1 A-kinase anchoring protein 1 ISO (PMID:31522117) UniProt PMID:31522117 NCBI chrNW_004955451:5,756,648...5,787,617 JBrowse link
G Clpb caseinolytic mitochondrial matrix peptidase chaperone subunit B ISO (PMID:31522117) UniProt PMID:31522117 NCBI chrNW_004955414:18,968,144...19,106,241 JBrowse link
G Ddx58 DExD/H-box helicase 58 ISO (PMID:28469175) UniProt PMID:28469175 NCBI chrNW_004955472:3,093,895...3,135,524 JBrowse link
G Phb prohibitin ISO (PMID:31522117) UniProt PMID:31522117 NCBI chrNW_004955451:12,110,290...12,119,870 JBrowse link
G Phb2 prohibitin 2 ISO (PMID:31522117) UniProt PMID:31522117 NCBI chrNW_004955413:4,557,969...4,563,697 JBrowse link
G Rnf135 ring finger protein 135 ISO (PMID:28469175), (PMID:31006531)
(MGI:MGI:6152590|PMID:21147464), (MGI:MGI:6155526|PMID:23950712)
UniProt PMID:21147464, PMID:23950712, PMID:28469175, PMID:31006531 MGI:MGI:6152590, MGI:MGI:6155526 NCBI chrNW_004955481:7,111,760...7,122,800 JBrowse link
G Zdhhc1 zinc finger DHHC-type containing 1 ISO (MGI:MGI:6392967|PMID:25299331)
(PMID:25299331)
UniProt PMID:25299331 MGI:MGI:6392967 NCBI chrNW_004955484:9,224,559...9,245,894 JBrowse link
MDA-5 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ifih1 interferon induced with helicase C domain 1 ISO (PMID:17600090) UniProtKB PMID:17600090 NCBI chrNW_004955449:11,538,869...11,596,502 JBrowse link
negative regulation of defense response to virus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C1qbp complement C1q binding protein ISO (PMID:19164550) UniProtKB PMID:19164550 NCBI chrNW_004955467:10,788,142...10,792,272 JBrowse link
G Fgl2 fibrinogen like 2 ISO (MGI:MGI:6188369|PMID:29341118) MGI PMID:29341118 MGI:MGI:6188369 NCBI chrNW_004955410:7,899,263...7,903,499 JBrowse link
G Foxp3 forkhead box P3 ISO RGD PMID:17878294 RGD:2325989 NCBI chrNW_004955543:731,707...742,606 JBrowse link
G Htra1 HtrA serine peptidase 1 ISO RGD PMID:15333144 RGD:2311622 NCBI chrNW_004955477:761,127...808,396 JBrowse link
G Ilrun inflammation and lipid regulator with UBA-like and NBR1-like domains ISO (PMID:29802199) UniProt PMID:29802199 NCBI chrNW_004955437:2,697,998...2,769,998 JBrowse link
G Itch itchy E3 ubiquitin protein ligase ISO (MGI:MGI:4436832|PMID:19881509)
(PMID:19881509)
UniProtKB PMID:19881509 MGI:MGI:4436832 NCBI chrNW_004955422:26,810,829...26,918,517 JBrowse link
G Pcbp2 poly(rC) binding protein 2 ISO (PMID:19881509) UniProtKB PMID:19881509 NCBI chrNW_004955458:747,770...773,885 JBrowse link
G Ppm1b protein phosphatase, Mg2+/Mn2+ dependent 1B ISO (PMID:22750291) UniProtKB PMID:22750291 NCBI chrNW_004955441:11,276,525...11,338,586 JBrowse link
G Rnf26 ring finger protein 26 ISO (PMID:25254379) UniProtKB PMID:25254379 NCBI chrNW_004955412:20,415,468...20,418,263 JBrowse link
G Traf3ip1 TRAF3 interacting protein 1 ISO (MGI:MGI:5306204|PMID:22079989)
(PMID:22079989)
MGI
CACAO
PMID:22079989 MGI:MGI:5306204 NCBI chrNW_004955542:2,264,472...2,301,083 JBrowse link
negative regulation of defense response to virus by host term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Irf3 interferon regulatory factor 3 ISO (MGI:MGI:3828224|PMID:18851954) MGI PMID:18851954 MGI:MGI:3828224 NCBI chrNW_004955559:1,223,986...1,228,671 JBrowse link
G Mul1 mitochondrial E3 ubiquitin protein ligase 1 ISO (PMID:23399697) UniProtKB PMID:23399697 NCBI chrNW_004955452:1,059,168...1,066,096 JBrowse link
G Tarbp2 TARBP2 subunit of RISC loading complex ISO (PMID:11641396) UniProtKB PMID:11641396 NCBI chrNW_004955458:793,753...798,755 JBrowse link
negative regulation of MDA-5 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C1qbp complement C1q binding protein ISO (PMID:19164550) UniProtKB PMID:19164550 NCBI chrNW_004955467:10,788,142...10,792,272 JBrowse link
G Dhx58 DExH-box helicase 58 ISO (PMID:21187438) UniProtKB PMID:21187438 NCBI chrNW_004955451:16,186,263...16,191,928 JBrowse link
G Riok3 RIO kinase 3 ISO (PMID:25865883) UniProtKB PMID:25865883 NCBI chrNW_004955402:11,649,160...11,670,010 JBrowse link
G Tkfc triokinase and FMN cyclase ISO (PMID:17600090) UniProtKB PMID:17600090 NCBI chrNW_004955511:6,200,433...6,235,855 JBrowse link
negative regulation of RIG-I signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C1qbp complement C1q binding protein ISO (PMID:19164550) UniProtKB PMID:19164550 NCBI chrNW_004955467:10,788,142...10,792,272 JBrowse link
G Dhx58 DExH-box helicase 58 ISO (PMID:21187438)
(PMID:18411269)
(MGI:MGI:3836702|PMID:17475874)
UniProtKB PMID:17475874, PMID:18411269, PMID:21187438 MGI:MGI:3836702 NCBI chrNW_004955451:16,186,263...16,191,928 JBrowse link
G Gpatch3 G-patch domain containing 3 ISO (PMID:28414768) UniProtKB PMID:28414768 NCBI chrNW_004955452:6,234,241...6,241,949 JBrowse link
G Nlrx1 NLR family member X1 ISO (MGI:MGI:5050761|PMID:21703540) MGI PMID:21703540 MGI:MGI:5050761 NCBI chrNW_004955412:20,275,767...20,287,414 JBrowse link
G Nploc4 NPL4 homolog, ubiquitin recognition factor ISO (PMID:26471729) UniProtKB PMID:26471729 NCBI chrNW_004955506:1,451,337...1,513,455 JBrowse link
G Rnf125 ring finger protein 125 ISO (PMID:17460044), (PMID:26471729) UniProtKB PMID:17460044, PMID:26471729 NCBI chrNW_004955402:19,276,157...19,310,605 JBrowse link
G Sec14l1 SEC14 like lipid binding 1 ISO (PMID:23843640) UniProtKB PMID:23843640 NCBI chrNW_004955506:5,159,090...5,231,827 JBrowse link
G Ufd1 ubiquitin recognition factor in ER associated degradation 1 ISO (PMID:26471729) UniProtKB PMID:26471729 NCBI chrNW_004955442:18,548,545...18,568,989 JBrowse link
negative regulation of viral-induced cytoplasmic pattern recognition receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tspan6 tetraspanin 6 ISO (PMID:22908223) UniProtKB PMID:22908223 NCBI chrNW_004955503:6,782,264...6,788,533 JBrowse link
positive regulation of defense response to virus by host term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cgas cyclic GMP-AMP synthase ISO (PMID:23929945), (PMID:24077100), (PMID:26046437)
(MGI:MGI:5505711|PMID:23929945), (MGI:MGI:5908326|PMID:24077100)
(PMID:23258413)
(MGI:MGI:5487472|PMID:23258413)
UniProtKB PMID:23258413, PMID:23929945, PMID:24077100, PMID:26046437 MGI:MGI:5487472, MGI:MGI:5505711, MGI:MGI:5908326 NCBI chrNW_004955493:8,593,104...8,607,297 JBrowse link
G Creb3 cAMP responsive element binding protein 3 ISO (PMID:20091349) UniProtKB PMID:20091349 NCBI chrNW_004955472:564,227...568,708 JBrowse link
G Ddx58 DExD/H-box helicase 58 ISO (PMID:19609254) UniProtKB PMID:19609254 NCBI chrNW_004955472:3,093,895...3,135,524 JBrowse link
G Dtx3l deltex E3 ubiquitin ligase 3L ISO (PMID:26479788) UniProt PMID:26479788 NCBI chrNW_004955427:21,806,170...21,812,701 JBrowse link
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 ISO (MGI:MGI:5700304|PMID:16601681) UniProtKB PMID:16601681 MGI:MGI:5700304 NCBI chrNW_004955416:6,897,897...7,005,602 JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor ISO (PMID:22483866) UniProt PMID:22483866 NCBI chrNW_004955556:745,175...812,215 JBrowse link
G Il12b interleukin 12B ISO (MGI:MGI:3027369|PMID:14688363)
(PMID:12421946)
BHF-UCL PMID:12421946, PMID:14688363 MGI:MGI:3027369 NCBI chrNW_004955408:13,302,506...13,316,300 JBrowse link
G Il12rb1 interleukin 12 receptor subunit beta 1 ISO (PMID:12421946) BHF-UCL PMID:12421946 NCBI chrNW_004955524:3,276,932...3,299,617 JBrowse link
G Il23a interleukin 23 subunit alpha ISO (MGI:MGI:3027369|PMID:14688363)
(PMID:12421946)
BHF-UCL PMID:12421946, PMID:14688363 MGI:MGI:3027369 NCBI chrNW_004955458:3,946,964...3,949,180 JBrowse link
G Il23r interleukin 23 receptor ISO (PMID:12421946) BHF-UCL PMID:12421946 NCBI chrNW_004955423:23,841,342...23,885,191 JBrowse link
G Il27 interleukin 27 ISO (MGI:MGI:5644636|PMID:25268627) MGI PMID:25268627 MGI:MGI:5644636 NCBI chrNW_004955493:6,712,005...6,717,417 JBrowse link
G Il4 interleukin 4 ISO RGD PMID:9721086 RGD:8142392 NCBI chrNW_004955408:4,058,052...4,065,999 JBrowse link
G Mavs mitochondrial antiviral signaling protein ISO (PMID:19609254)
(MGI:MGI:3807296|PMID:18780793)
(PMID:16127453)
UniProtKB
MGI
BHF-UCL
PMID:16127453, PMID:18780793, PMID:19609254 MGI:MGI:3807296 NCBI chrNW_004955415:14,691,918...14,704,782 JBrowse link
G Parp9 poly(ADP-ribose) polymerase family member 9 ISO (PMID:26479788) UniProt PMID:26479788 NCBI chrNW_004955427:21,770,158...21,806,091 JBrowse link
G Pml PML nuclear body scaffold ISO (PMID:16873256), (PMID:16873257) UniProtKB PMID:16873256, PMID:16873257 NCBI chrNW_004955450:3,654,854...3,692,057 JBrowse link
G Pqbp1 polyglutamine binding protein 1 ISO (PMID:26046437) UniProtKB PMID:26046437 NCBI chrNW_004955543:430,324...434,205 JBrowse link
G Ptpn22 protein tyrosine phosphatase non-receptor type 22 ISO (MGI:MGI:5562517|PMID:23871208) UniProtKB PMID:23871208 MGI:MGI:5562517 NCBI chrNW_004955435:17,082,762...17,139,067 JBrowse link
G Selenok selenoprotein K ISO (MGI:MGI:4939970|PMID:21220695) UniProtKB PMID:21220695 MGI:MGI:4939970 NCBI chrNW_004955430:3,870,925...3,876,636 JBrowse link
G Sin3a SIN3 transcription regulator family member A ISO (PMID:22783022) BHF-UCL PMID:22783022 NCBI chrNW_004955450:2,804,551...2,870,450 JBrowse link
G Stat1 signal transducer and activator of transcription 1 ISO (PMID:26479788) UniProtKB
UniProt
PMID:26479788 NCBI chrNW_004955403:8,156,660...8,192,018 JBrowse link
G Sting1 stimulator of interferon response cGAMP interactor 1 ISO (PMID:18818105) BHF-UCL PMID:18818105 NCBI chrNW_004955418:1,091,022...1,097,064 JBrowse link
G Traf3ip2 TRAF3 interacting protein 2 ISO (PMID:23066157) CACAO PMID:23066157 NCBI chrNW_004955411:36,328,152...36,363,614 JBrowse link
G Treml4 triggering receptor expressed on myeloid cells like 4 ISO (MGI:MGI:5775261|PMID:25848864) UniProtKB PMID:25848864 MGI:MGI:5775261 NCBI chrNW_004955437:7,827,329...7,846,406 JBrowse link
G Trim44 tripartite motif containing 44 ISO (PMID:23460740) BHF-UCL PMID:23460740 NCBI chrNW_004955422:10,580,002...10,690,349 JBrowse link
G Trim6 tripartite motif containing 6 ISO (PMID:24882218) UniProtKB PMID:24882218 NCBI chrNW_004955414:21,495,593...21,513,703 JBrowse link
G Zc3h12a zinc finger CCCH-type containing 12A ISO (PMID:23355615) UniProtKB PMID:23355615 NCBI chrNW_004955452:15,306,398...15,314,959 JBrowse link
G Zdhhc1 zinc finger DHHC-type containing 1 ISO (MGI:MGI:6392967|PMID:25299331)
(PMID:25299331)
UniProt PMID:25299331 MGI:MGI:6392967 NCBI chrNW_004955484:9,224,559...9,245,894 JBrowse link
positive regulation of MDA-5 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankrd17 ankyrin repeat domain 17 ISO (PMID:22328336) UniProtKB PMID:22328336 NCBI chrNW_004955447:259,654...376,147 JBrowse link
G Ddx60 DExD/H-box helicase 60 ISO (PMID:21791617) UniProtKB PMID:21791617 NCBI chrNW_004955403:37,679,939...37,765,074 JBrowse link
G Dhx58 DExH-box helicase 58 ISO (MGI:MGI:4421606|PMID:20080593) UniProtKB PMID:20080593 MGI:MGI:4421606 NCBI chrNW_004955451:16,186,263...16,191,928 JBrowse link
positive regulation of RIG-I signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankrd17 ankyrin repeat domain 17 ISO (PMID:22328336) UniProtKB PMID:22328336 NCBI chrNW_004955447:259,654...376,147 JBrowse link
G Ddx60 DExD/H-box helicase 60 ISO (PMID:21791617) UniProtKB PMID:21791617 NCBI chrNW_004955403:37,679,939...37,765,074 JBrowse link
G Dhx58 DExH-box helicase 58 ISO (MGI:MGI:4421606|PMID:20080593) UniProtKB PMID:20080593 MGI:MGI:4421606 NCBI chrNW_004955451:16,186,263...16,191,928 JBrowse link
G Pum1 pumilio RNA binding family member 1 ISO (PMID:25340845) UniProtKB PMID:25340845 NCBI chrNW_004955452:9,487,725...9,623,565 JBrowse link
G Pum2 pumilio RNA binding family member 2 ISO (PMID:25340845) UniProtKB PMID:25340845 NCBI chrNW_004955469:2,810,825...2,886,911 JBrowse link
G Trim15 tripartite motif containing 15 ISO (PMID:23077300) UniProtKB PMID:23077300 NCBI chrNW_004955583:277,564...283,422 JBrowse link
G Usp15 ubiquitin specific peptidase 15 ISO (PMID:24399297) CACAO PMID:24399297 NCBI chrNW_004955458:9,440,645...9,533,653 JBrowse link
G Zc3hav1 zinc finger CCCH-type containing, antiviral 1 ISO (PMID:21102435) UniProtKB PMID:21102435 NCBI chrNW_004955494:3,925,478...3,985,469 JBrowse link
G Zcchc3 zinc finger CCHC-type containing 3 ISO (PMID:30193849) UniProt PMID:30193849 NCBI chrNW_004955597:194,912...197,697 JBrowse link
regulation of defense response to virus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd37 CD37 molecule ISO (MGI:MGI:4830018|PMID:20709950) MGI PMID:20709950 MGI:MGI:4830018 NCBI chrNW_004955559:1,465,937...1,471,249 JBrowse link
G Elmod2 ELMO domain containing 2 ISO (PMID:17452337) UniProtKB PMID:17452337 NCBI chrNW_004955428:3,289,593...3,308,927 JBrowse link
G Herc5 HECT and RLD domain containing E3 ubiquitin protein ligase 5 ISO (PMID:20308324) UniProtKB PMID:20308324 NCBI chrNW_004955474:11,954,915...11,991,849 JBrowse link
G Spn sialophorin ISO (MGI:MGI:76803|PMID:7566153) MGI PMID:7566153 MGI:MGI:76803 NCBI chrNW_004955493:7,256,505...7,258,607 JBrowse link
G Traf3 TNF receptor associated factor 3 ISO (MGI:MGI:4839450|PMID:16306937) UniProtKB PMID:16306937 MGI:MGI:4839450 NCBI chrNW_004955538:1,954,152...2,013,367 JBrowse link
G Tspan32 tetraspanin 32 ISO (MGI:MGI:4830018|PMID:20709950) MGI PMID:20709950 MGI:MGI:4830018 NCBI chrNW_004955422:14,101,833...14,121,784 JBrowse link
G Zmpste24 zinc metallopeptidase STE24 ISO (PMID:28246125)
(MGI:MGI:5902878|PMID:28246125)
MGI PMID:28246125 MGI:MGI:5902878 NCBI chrNW_004955537:82,724...134,609 JBrowse link
regulation of defense response to virus by host term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhx9 DExH-box helicase 9 ISO (MGI:MGI:5908739|PMID:28636595) UniProtKB PMID:28636595 MGI:MGI:5908739 NCBI chrNW_004955406:21,697,813...21,743,551 JBrowse link
G Ifng interferon gamma ISO (MGI:MGI:5583923|PMID:24784232) CAFA PMID:24784232 MGI:MGI:5583923 NCBI chrNW_004955458:14,643,333...14,648,020 JBrowse link
G Ifnlr1 interferon lambda receptor 1 ISO (PMID:12469119) UniProtKB PMID:12469119 NCBI chrNW_004955452:4,002,389...4,028,193 JBrowse link
G Il15 interleukin 15 ISO (MGI:MGI:1354083|PMID:10704459) MGI PMID:10704459 MGI:MGI:1354083 NCBI chrNW_004955471:1,496,352...1,583,919 JBrowse link
G Il1b interleukin 1 beta ISO (MGI:MGI:5583923|PMID:24784232) CAFA PMID:24784232 MGI:MGI:5583923 NCBI chrNW_004955470:1,486,936...1,491,888 JBrowse link
G Mmp12 matrix metallopeptidase 12 ISO (MGI:MGI:5583923|PMID:24784232) CAFA PMID:24784232 MGI:MGI:5583923 NCBI chrNW_004955412:6,045,146...6,057,112 JBrowse link
G Rnf216 ring finger protein 216 ISO (PMID:19893624) UniProtKB PMID:19893624 NCBI chrNW_004955460:10,423,736...10,578,421 JBrowse link
G Zc3hav1 zinc finger CCCH-type containing, antiviral 1 ISO RGD PMID:12215647 RGD:634516 NCBI chrNW_004955494:3,925,478...3,985,469 JBrowse link
regulation of RIG-I signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nop53 NOP53 ribosome biogenesis factor ISO (PMID:27824081) UniProtKB PMID:27824081 NCBI chrNW_004955574:1,505,997...1,514,680 JBrowse link
RIG-I signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clpb caseinolytic mitochondrial matrix peptidase chaperone subunit B ISO (PMID:31522117) UniProt PMID:31522117 NCBI chrNW_004955414:18,968,144...19,106,241 JBrowse link
G Ddx58 DExD/H-box helicase 58 ISO (PMID:19211564)
(PMID:28469175)
UniProtKB
UniProt
PMID:19211564, PMID:28469175 NCBI chrNW_004955472:3,093,895...3,135,524 JBrowse link
G Lsm14a LSM14A mRNA processing body assembly factor ISO (MGI:MGI:5432265|PMID:22745163) MGI PMID:22745163 MGI:MGI:5432265 NCBI chrNW_004955468:3,799,897...3,863,241 JBrowse link
G Mavs mitochondrial antiviral signaling protein ISO (MGI:MGI:5432265|PMID:22745163) MGI PMID:22745163 MGI:MGI:5432265 NCBI chrNW_004955415:14,691,918...14,704,782 JBrowse link
G Phb prohibitin ISO (PMID:31522117) UniProt PMID:31522117 NCBI chrNW_004955451:12,110,290...12,119,870 JBrowse link
G Phb2 prohibitin 2 ISO (PMID:31522117) UniProt PMID:31522117 NCBI chrNW_004955413:4,557,969...4,563,697 JBrowse link
G Rnf135 ring finger protein 135 ISO (MGI:MGI:6152590|PMID:21147464), (MGI:MGI:6377978|PMID:28469175)
(PMID:28469175), (PMID:31006531)
(PMID:23950712)
UniProt PMID:21147464, PMID:23950712, PMID:28469175, PMID:31006531 MGI:MGI:6152590, MGI:MGI:6377978 NCBI chrNW_004955481:7,111,760...7,122,800 JBrowse link
G Trim25 tripartite motif containing 25 NOT ISO (PMID:31006531) UniProt PMID:31006531 NCBI chrNW_004955451:5,918,287...5,934,252 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 11857
    immune system process 1903
      immune effector process 598
        defense response to virus 176
          antiviral innate immune response 7
          cytoplasmic pattern recognition receptor signaling pathway in response to virus + 29
          negative regulation of defense response to virus + 23
          regulation of defense response to virus + 73
          virus induced gene silencing + 0
Path 2
Term Annotations click to browse term
  biological_process 11857
    response to stimulus 6353
      response to external stimulus 2306
        response to external biotic stimulus 1045
          response to other organism 1042
            defense response to other organism 581
              defense response to virus 176
                antiviral innate immune response 7
                cytoplasmic pattern recognition receptor signaling pathway in response to virus + 29
                negative regulation of defense response to virus + 23
                regulation of defense response to virus + 73
                virus induced gene silencing + 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.