ONTOLOGY REPORT - ANNOTATIONS


Term:localization within membrane
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Accession:GO:0051668 term browser browse the term
Definition:Any process in which a substance or cellular entity, such as a protein complex or organelle, is transported to, and/or maintained in, a specific location within a membrane.
Synonyms:exact_synonym: establishment and maintenance of localization in membrane;   establishment and maintenance of position in membrane;   localisation within membrane;   localization to membrane
 narrow_synonym: positioning within membrane


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localization within membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cdh13 cadherin 13 JBrowse link 19 50,848,793 51,971,618 RGD:1624291
RGD:1600115
G Cnih2 cornichon family AMPA receptor auxiliary protein 2 JBrowse link 1 220,474,485 220,480,723 RGD:8554136
G Rac1 Rac family small GTPase 1 JBrowse link 12 13,090,316 13,111,841 RGD:1624291
RGD:1600115
G Zdhhc3 zinc finger, DHHC-type containing 3 JBrowse link 8 132,156,216 132,204,484 RGD:1624291
AMPA glutamate receptor clustering term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apoe apolipoprotein E JBrowse link 1 80,612,894 80,616,820 RGD:1624291
RGD:1600115
G Dlg4 discs large MAGUK scaffold protein 4 JBrowse link 10 56,625,845 56,655,543 RGD:8554095
RGD:13792537
G Lrrtm4 leucine rich repeat transmembrane neuronal 4 JBrowse link 4 110,699,577 111,497,643 RGD:1624291
G Nlgn1 neuroligin 1 JBrowse link 2 111,057,291 111,973,681 RGD:8553843
RGD:1624291
RGD:1600115
G Shank3 SH3 and multiple ankyrin repeat domains 3 JBrowse link 7 130,474,278 130,534,679 RGD:1600115
RGD:1624291
RGD:7349315
B cell receptor transport into membrane raft term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cd24 CD24 molecule JBrowse link 20 48,335,540 48,340,847 RGD:1624291
RGD:1600115
chemokine receptor transport out of membrane raft term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cd24 CD24 molecule JBrowse link 20 48,335,540 48,340,847 RGD:1624291
RGD:1600115
ciliary receptor clustering involved in smoothened signaling pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ift122 intraflagellar transport 122 JBrowse link 4 147,756,574 147,826,983 RGD:1624291
RGD:1600115
G Nme7 NME/NM23 family member 7 JBrowse link 13 82,607,844 82,737,383 RGD:1624291
G Ssna1 SS nuclear autoantigen 1 JBrowse link 3 2,489,017 2,490,481 RGD:1624291
RGD:1600115
G Wdr19 WD repeat domain 19 JBrowse link 14 44,705,012 44,767,120 RGD:1624291
RGD:1600115
COPII-coated vesicle cargo loading term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mia3 MIA SH3 domain ER export factor 3 JBrowse link 13 101,727,434 101,770,127 RGD:1624291
G Rab1a RAB1A, member RAS oncogene family JBrowse link 14 104,475,082 104,500,176 RGD:1624291
G Sar1a secretion associated, Ras related GTPase 1A JBrowse link 20 31,298,269 31,310,676 RGD:1624291
G Sec13 SEC13 homolog, nuclear pore and COPII coat complex component JBrowse link 4 145,686,186 145,699,577 RGD:1624291
G Sec23a Sec23 homolog A, coat complex II component JBrowse link 6 80,059,742 80,107,340 RGD:1624291
RGD:13792537
G Sec23b Sec23 homolog B, coat complex II component JBrowse link 3 138,715,118 138,757,111 RGD:13792537
G Sec24a SEC24 homolog A, COPII coat complex component JBrowse link 10 37,138,539 37,215,899 RGD:1624291
RGD:1600115
G Sec24b SEC24 homolog B, COPII coat complex component JBrowse link 2 230,286,886 230,356,887 RGD:1624291
RGD:1600115
G Sec24c SEC24 homolog C, COPII coat complex component JBrowse link 15 4,035,196 4,057,209 RGD:1624291
RGD:1600115
G Sec24d SEC24 homolog D, COPII coat complex component JBrowse link 2 227,455,704 227,562,801 RGD:1624291
RGD:1600115
G Sec31a SEC31 homolog A, COPII coat complex component JBrowse link 14 10,854,713 10,909,579 RGD:1600115
RGD:13792537
RGD:1624291
G Sec31b SEC31 homolog B, COPII coat complex component JBrowse link 1 264,266,279 264,294,687 RGD:13792537
G Tbc1d20 TBC1 domain family, member 20 JBrowse link 3 147,772,006 147,790,946 RGD:1624291
RGD:1600115
gamma-aminobutyric acid receptor clustering term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Glrb glycine receptor, beta JBrowse link 2 179,768,040 179,842,612 RGD:1624291
RGD:1600115
G Gphn gephyrin JBrowse link 6 101,327,874 101,859,169 RGD:1624291
RGD:13792537
RGD:1600115
G Lhfpl4 LHFPL tetraspan subfamily member 4 JBrowse link 4 145,117,533 145,147,397 RGD:1600115
RGD:1624291
G Nrxn1 neurexin 1 JBrowse link 6 13,886,757 15,191,660 RGD:1624291
RGD:1600115
glutamate receptor clustering term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Glra3 glycine receptor, alpha 3 JBrowse link 16 37,676,959 37,908,221 RGD:1624291
glycine receptor clustering term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gphn gephyrin JBrowse link 6 101,327,874 101,859,169 RGD:1624291
RGD:13792537
membrane raft localization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rala RAS like proto-oncogene A JBrowse link 17 49,676,073 49,729,133 RGD:1624291
RGD:1600115
membrane raft polarization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dock2 dedicator of cytokinesis 2 JBrowse link 10 19,181,512 19,603,171 RGD:1624291
negative regulation of cargo loading into COPII-coated vesicle term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Insig1 insulin induced gene 1 JBrowse link 4 342,302 350,515 RGD:1624291
G Sar1a secretion associated, Ras related GTPase 1A JBrowse link 20 31,298,269 31,310,676 RGD:1624291
negative regulation of skeletal muscle acetylcholine-gated channel clustering term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fzd9 frizzled class receptor 9 JBrowse link 12 24,473,981 24,476,295 RGD:1624291
RGD:1600115
neurexin clustering involved in presynaptic membrane assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nlgn1 neuroligin 1 JBrowse link 2 111,057,291 111,973,681 RGD:1624291
RGD:1600115
neuroligin clustering involved in postsynaptic membrane assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cdh2 cadherin 2 JBrowse link 18 8,146,971 8,366,037 RGD:1624291
RGD:1600115
G Magi2 membrane associated guanylate kinase, WW and PDZ domain containing 2 JBrowse link 4 10,995,241 12,472,423 RGD:1624291
RGD:1600115
G Nrxn1 neurexin 1 JBrowse link 6 13,886,757 15,191,660 RGD:1600115
RGD:1624291
G Nrxn2 neurexin 2 JBrowse link 1 221,792,191 221,908,047 RGD:1600115
RGD:1624291
neurotransmitter-gated ion channel clustering term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Lrrtm4 leucine rich repeat transmembrane neuronal 4 JBrowse link 4 110,699,577 111,497,643 RGD:1624291
NMDA glutamate receptor clustering term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apoe apolipoprotein E JBrowse link 1 80,612,894 80,616,820 RGD:1624291
RGD:1600115
G Htr1a 5-hydroxytryptamine receptor 1A JBrowse link 2 36,246,628 36,247,896 RGD:7241017
G Nlgn1 neuroligin 1 JBrowse link 2 111,057,291 111,973,681 RGD:8553605
G Nrxn1 neurexin 1 JBrowse link 6 13,886,757 15,191,660 RGD:1624291
RGD:1600115
G Reln reelin JBrowse link 4 9,347,533 9,774,257 RGD:1624291
RGD:1600115
G Shank3 SH3 and multiple ankyrin repeat domains 3 JBrowse link 7 130,474,278 130,534,679 RGD:1624291
RGD:1600115
nuclear pore distribution term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ndc1 NDC1 transmembrane nucleoporin JBrowse link 5 126,976,636 127,022,941 RGD:1600115
RGD:1624291
G Nup133 nucleoporin 133 JBrowse link 19 56,681,965 56,731,404 RGD:13792537
plasma membrane raft distribution term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ptprc protein tyrosine phosphatase, receptor type, C JBrowse link 13 55,061,561 55,174,150 RGD:1624291
positive regulation of AMPA glutamate receptor clustering term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Grip2 glutamate receptor interacting protein 2 JBrowse link 4 123,585,184 123,636,040 RGD:4107359
G Snx27 sorting nexin family member 27 JBrowse link 2 195,738,613 195,821,608 RGD:13508620
G Ssh1 slingshot protein phosphatase 1 JBrowse link 12 48,403,184 48,447,964 RGD:11535133
positive regulation of receptor clustering term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cd81 Cd81 molecule JBrowse link 1 216,237,663 216,253,460 RGD:1600115
RGD:1624291
G Tgfb1 transforming growth factor, beta 1 JBrowse link 1 82,480,875 82,497,196 RGD:1624291
RGD:1600115
positive regulation of skeletal muscle acetylcholine-gated channel clustering term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Lrp4 LDL receptor related protein 4 JBrowse link 3 80,362,643 80,416,684 RGD:1624291
RGD:1600115
G Lrp5 LDL receptor related protein 5 JBrowse link 1 218,816,833 218,920,147 RGD:1624291
G Mesd mesoderm development LRP chaperone JBrowse link 1 146,030,211 146,043,097 RGD:1624291
RGD:1600115
G Musk muscle associated receptor tyrosine kinase JBrowse link 5 75,392,790 75,498,694 RGD:1624291
G Ptn pleiotrophin JBrowse link 4 64,239,156 64,330,996 RGD:9834945
postsynaptic neurotransmitter receptor diffusion trapping term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cacng2 calcium voltage-gated channel auxiliary subunit gamma 2 JBrowse link 7 119,228,112 119,353,332 RGD:1624291
RGD:13792537
G Cacng3 calcium voltage-gated channel auxiliary subunit gamma 3 JBrowse link 1 192,613,766 192,708,371 RGD:13792537
G Cacng4 calcium voltage-gated channel auxiliary subunit gamma 4 JBrowse link 10 95,954,160 96,015,484 RGD:13792537
G Cacng5 calcium voltage-gated channel auxiliary subunit gamma 5 JBrowse link 10 96,122,240 96,166,606 RGD:13792537
G Cacng7 calcium voltage-gated channel auxiliary subunit gamma 7 JBrowse link 1 64,374,547 64,405,380 RGD:13792537
G Cacng8 calcium voltage-gated channel auxiliary subunit gamma 8 JBrowse link 1 64,330,106 64,350,338 RGD:13792537
G Camk2a calcium/calmodulin-dependent protein kinase II alpha JBrowse link 18 56,193,978 56,295,869 RGD:12050118
G Dlg4 discs large MAGUK scaffold protein 4 JBrowse link 10 56,625,845 56,655,543 RGD:12050129
RGD:13792537
G Gphn gephyrin JBrowse link 6 101,327,874 101,859,169 RGD:1624291
RGD:13792537
G Shisa6 shisa family member 6 JBrowse link 10 52,744,069 53,037,853 RGD:1600115
RGD:1624291
protein transport from ciliary membrane to plasma membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Arl6 ADP-ribosylation factor like GTPase 6 JBrowse link 11 42,858,476 42,884,324 RGD:1624291
RGD:1600115
G Rilpl1 Rab interacting lysosomal protein-like 1 JBrowse link 12 37,490,320 37,528,393 RGD:1624291
RGD:1600115
G Rilpl2 Rab interacting lysosomal protein-like 2 JBrowse link 12 37,544,918 37,556,453 RGD:1624291
RGD:1600115
protein transport into membrane raft term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Reep2 receptor accessory protein 2 JBrowse link 18 27,632,562 27,641,594 RGD:1624291
G Rftn1 raftlin lipid raft linker 1 JBrowse link 9 12,740,885 12,942,358 RGD:1624291
RGD:1600115
protein transport into plasma membrane raft term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Clip1 CAP-GLY domain containing linker protein 1 JBrowse link 12 38,345,203 38,452,650 RGD:1624291
RGD:1600115
G Tsc2 TSC complex subunit 2 JBrowse link 10 13,962,006 13,996,684 RGD:1624291
protein transport within lipid bilayer term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Itgb1 integrin subunit beta 1 JBrowse link 19 61,677,512 61,725,537 RGD:2325331
receptor clustering term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Agrn agrin JBrowse link 5 173,589,910 173,622,813 RGD:8554357
RGD:13792537
RGD:1624291
RGD:1600115
G Arhgef9 Cdc42 guanine nucleotide exchange factor 9 JBrowse link X 64,249,576 64,428,444 RGD:632270
G Cacna1a calcium voltage-gated channel subunit alpha1 A JBrowse link 19 25,453,236 25,749,550 RGD:1624291
RGD:1600115
G Cdk5 cyclin-dependent kinase 5 JBrowse link 4 7,282,945 7,287,427 RGD:1624291
RGD:1600115
G Dlg1 discs large MAGUK scaffold protein 1 JBrowse link 11 72,164,566 72,378,895 RGD:13792537
G Dlg2 discs large MAGUK scaffold protein 2 JBrowse link 1 154,916,274 157,274,077 RGD:728660
RGD:13792537
G Dlg3 discs large MAGUK scaffold protein 3 JBrowse link X 70,596,246 70,648,529 RGD:13792537
G Dlg4 discs large MAGUK scaffold protein 4 JBrowse link 10 56,625,845 56,655,543 RGD:13792537
G Dok7 docking protein 7 JBrowse link 14 80,925,409 80,963,454 RGD:1624291
G Dvl1 dishevelled segment polarity protein 1 JBrowse link 5 173,295,948 173,308,014 RGD:1624291
G Erbin erbb2 interacting protein JBrowse link 2 33,880,860 33,952,806 RGD:13792537
G Flna filamin A JBrowse link X 156,460,785 156,487,245 RGD:1624291
RGD:1600115
G Grik2 glutamate ionotropic receptor kainate type subunit 2 JBrowse link 20 53,791,428 54,517,691 RGD:8554157
G Grik5 glutamate ionotropic receptor kainate type subunit 5 JBrowse link 1 81,885,516 81,946,731 RGD:8554157
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B JBrowse link 4 169,541,620 170,000,216 RGD:4107026
G Itga4 integrin subunit alpha 4 JBrowse link 3 66,178,745 66,265,547 RGD:1624291
RGD:1600115
G Itgal integrin subunit alpha L JBrowse link 1 198,744,053 198,781,745 RGD:1624291
RGD:1600115
G Itgb1bp1 integrin subunit beta 1 binding protein 1 JBrowse link 6 43,348,927 43,363,633 RGD:1624291
RGD:1600115
G Itgb2 integrin subunit beta 2 JBrowse link 20 11,777,773 11,815,647 RGD:1624291
RGD:1600115
G Itgb7 integrin subunit beta 7 JBrowse link 7 143,820,236 143,837,802 RGD:1624291
RGD:1600115
G Lrp4 LDL receptor related protein 4 JBrowse link 3 80,362,643 80,416,684 RGD:1624291
G Lrrc7 leucine rich repeat containing 7 JBrowse link 2 264,910,594 265,300,860 RGD:13792537
G Madcam1 mucosal vascular addressin cell adhesion molecule 1 JBrowse link 7 12,918,352 12,922,509 RGD:1624291
G Magi2 membrane associated guanylate kinase, WW and PDZ domain containing 2 JBrowse link 4 10,995,241 12,472,423 RGD:632272
RGD:13792537
G Musk muscle associated receptor tyrosine kinase JBrowse link 5 75,392,790 75,498,694 RGD:2317096
RGD:1624291
G Pak1 p21 (RAC1) activated kinase 1 JBrowse link 1 162,768,156 162,883,356 RGD:1624291
G Pick1 protein interacting with PRKCA 1 JBrowse link 7 120,465,472 120,484,824 RGD:69384
RGD:13792537
RGD:1600115
RGD:1624291
G Pigr polymeric immunoglobulin receptor JBrowse link 13 47,564,176 47,592,093 RGD:1600115
RGD:1624291
G Ptn pleiotrophin JBrowse link 4 64,239,156 64,330,996 RGD:1600115
RGD:1624291
G Scrib scribble planar cell polarity protein JBrowse link 7 117,105,810 117,128,802 RGD:13792537
G Syngap1 synaptic Ras GTPase activating protein 1 JBrowse link 20 5,535,434 5,564,657 RGD:1624291
RGD:1600115
G Synj2bp synaptojanin 2 binding protein JBrowse link 6 105,224,166 105,261,549 RGD:13792537
G Thy1 Thy-1 cell surface antigen JBrowse link 8 48,382,121 48,387,271 RGD:12793046
regulation of AMPA glutamate receptor clustering term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Shank3 SH3 and multiple ankyrin repeat domains 3 JBrowse link 7 130,474,278 130,534,679 RGD:1624291
RGD:1600115
G Shisa6 shisa family member 6 JBrowse link 10 52,744,069 53,037,853 RGD:1600115
RGD:1624291
G Shisa7 shisa family member 7 JBrowse link 1 72,545,413 72,564,513 RGD:1600115
RGD:1624291
G Slc7a11 solute carrier family 7 member 11 JBrowse link 2 139,453,774 139,528,479 RGD:1624291
RGD:1600115
regulation of cargo loading into COPII-coated vesicle term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sar1a secretion associated, Ras related GTPase 1A JBrowse link 20 31,298,269 31,310,676 RGD:1624291
G Sec24b SEC24 homolog B, COPII coat complex component JBrowse link 2 230,286,886 230,356,887 RGD:1624291
RGD:1600115
regulation of plasma membrane raft polarization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gsn gelsolin JBrowse link 3 14,456,106 14,508,922 RGD:1624291
RGD:1600115
regulation of receptor clustering term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gsn gelsolin JBrowse link 3 14,456,106 14,508,922 RGD:1624291
RGD:1600115
regulation of skeletal muscle acetylcholine-gated channel clustering term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Crkl CRK like proto-oncogene, adaptor protein JBrowse link 11 87,338,606 87,356,644 RGD:1600115
RGD:1624291
G Fzd9 frizzled class receptor 9 JBrowse link 12 24,473,981 24,476,295 RGD:1624291
RGD:1600115
G LOC100911248 crk-like protein-like JBrowse link 11 87,778,338 87,815,049 RGD:1600115
G Sorbs1 sorbin and SH3 domain containing 1 JBrowse link 1 259,373,921 259,502,108 RGD:1624291
G Sorbs2 sorbin and SH3 domain containing 2 JBrowse link 16 49,626,205 49,820,223 RGD:1624291
skeletal muscle acetylcholine-gated channel clustering term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Agrn agrin JBrowse link 5 173,589,910 173,622,813 RGD:8553690
RGD:10047261
G Colq collagen like tail subunit of asymmetric acetylcholinesterase JBrowse link 16 7,626,380 7,681,621 RGD:1624291
RGD:1600115
G Dnaja3 DnaJ heat shock protein family (Hsp40) member A3 JBrowse link 10 11,059,701 11,085,186 RGD:1624291
G Dvl1 dishevelled segment polarity protein 1 JBrowse link 5 173,295,948 173,308,014 RGD:1624291
RGD:1600115
G Etv5 ets variant 5 JBrowse link 11 82,194,657 82,252,145 RGD:1624291
RGD:1600115
G Fnta farnesyltransferase, CAAX box, alpha JBrowse link 16 70,834,957 70,854,724 RGD:1600115
G Lrp4 LDL receptor related protein 4 JBrowse link 3 80,362,643 80,416,684 RGD:1600115
RGD:1624291
G Musk muscle associated receptor tyrosine kinase JBrowse link 5 75,392,790 75,498,694 RGD:1624291
G Rer1 retention in endoplasmic reticulum sorting receptor 1 JBrowse link 5 172,476,746 172,488,822 RGD:1624291
RGD:1600115

Term paths to the root
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Term Annotations click to browse term
  biological_process 17928
    localization 5991
      cellular localization 2664
        localization within membrane 110
          COPII-coated vesicle cargo loading + 14
          membrane raft localization + 4
          nuclear pore localization + 2
          protein transport within lipid bilayer + 9
          receptor clustering + 71
          receptor diffusion trapping + 10
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.