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ONTOLOGY REPORT - ANNOTATIONS


Term:localization within membrane
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Accession:GO:0051668 term browser browse the term
Definition:Any process in which a substance or cellular entity, such as a protein complex or organelle, is transported to, and/or maintained in, a specific location within a membrane.
Synonyms:exact_synonym: establishment and maintenance of localization in membrane;   establishment and maintenance of position in membrane;   localisation within membrane;   localization to membrane
 narrow_synonym: positioning within membrane


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localization within membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdh13 cadherin 13 ISO (PMID:17573778) RGD PMID:17573778 NCBI chr19:50,848,793...51,971,618
Ensembl chr19:50,848,736...51,972,103
JBrowse link
G Cnih2 cornichon family AMPA receptor auxiliary protein 2 IDA PMID:19265014 MGI PMID:19265014 RGD:8554136 NCBI chr 1:220,474,485...220,480,723
Ensembl chr 1:220,474,493...220,480,132
JBrowse link
G Rac1 Rac family small GTPase 1 ISO (PMID:16636067) RGD PMID:16636067 NCBI chr12:13,090,316...13,111,841
Ensembl chr12:13,090,172...13,111,873
JBrowse link
AMPA glutamate receptor clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoe apolipoprotein E ISO
IEA
(PMID:24328732)
GO_REF:0000107
RGD
Ensembl
PMID:24328732 GO_REF:0000107 NCBI chr 1:80,612,894...80,616,820
Ensembl chr 1:80,612,895...80,617,057
JBrowse link
G Dlg4 discs large MAGUK scaffold protein 4 IMP
IBA
PMID:21525273
PMID:21873635
BHF-UCL
GO_Central
PMID:21525273, PMID:21873635 RGD:8554095, RGD:13792537 NCBI chr10:56,625,845...56,655,543
Ensembl chr10:56,627,411...56,653,599
JBrowse link
G Lrrtm4 leucine rich repeat transmembrane neuronal 4 ISO MGI:5521326 (MGI:5515242|PMID:23911104) RGD PMID:23911104 MGI:5515242 NCBI chr 4:110,699,577...111,497,643
Ensembl chr 4:110,699,557...111,497,643
JBrowse link
G Nlgn1 neuroligin 1 IMP
ISO
ISS
PMID:21940442
(MGI:2665153|PMID:12796785), (MGI:5320256|PMID:21940442)
GO_REF:0000024
RGD
BHF-UCL
PMID:12796785, PMID:21940442, PMID:21940442 GO_REF:0000024, MGI:2665153, MGI:5320256, RGD:8553843 NCBI chr 2:111,057,291...111,973,681
Ensembl chr 2:111,057,291...111,793,326
JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 ISS
ISO
IEA
PMID:21795692
(MGI:5013997|PMID:21558424), (MGI:5320264|PMID:21795692)
GO_REF:0000107
RGD
Ensembl
PMID:21558424, PMID:21795692, PMID:21795692 GO_REF:0000107, MGI:5013997, MGI:5320264, RGD:7349315 NCBI chr 7:130,474,278...130,534,679
Ensembl chr 7:130,474,279...130,534,679
JBrowse link
B cell receptor transport into membrane raft term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd24 CD24 molecule ISO
ISS
(PMID:11313396)
GO_REF:0000024
RGD
UniProt
PMID:11313396 GO_REF:0000024 NCBI chr20:48,335,540...48,340,847
Ensembl chr20:48,335,540...48,340,846
JBrowse link
chemokine receptor transport out of membrane raft term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd24 CD24 molecule ISS
ISO
GO_REF:0000024
(MGI:3614932|PMID:16390867)
UniProt
RGD
PMID:16390867 GO_REF:0000024, MGI:3614932 NCBI chr20:48,335,540...48,340,847
Ensembl chr20:48,335,540...48,340,846
JBrowse link
ciliary receptor clustering involved in smoothened signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ift122 intraflagellar transport 122 ISO MGI:2443231 (MGI:5428054|PMID:22689656) RGD PMID:22689656 MGI:5428054 NCBI chr 4:147,756,574...147,826,983
Ensembl chr 4:147,756,553...147,826,997
JBrowse link
G Nme7 NME/NM23 family member 7 ISO (MGI:5317033|PMID:21289087) RGD PMID:21289087 MGI:5317033 NCBI chr13:82,607,844...82,737,383
Ensembl chr13:82,626,685...82,737,343
JBrowse link
G Ssna1 SS nuclear autoantigen 1 ISO (MGI:5317033|PMID:21289087) RGD PMID:21289087 MGI:5317033 NCBI chr 3:2,489,017...2,490,481
Ensembl chr 3:2,489,042...2,490,392
JBrowse link
G Wdr19 WD repeat domain 19 ISO MGI:1932386 (MGI:5428054|PMID:22689656) RGD PMID:22689656 MGI:5428054 NCBI chr14:44,705,012...44,767,120
Ensembl chr14:44,705,012...44,767,120
JBrowse link
COPII-coated vesicle cargo loading term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mia3 MIA SH3 domain ER export factor 3 ISO (PMID:27138255) RGD PMID:27138255 NCBI chr13:101,727,434...101,770,127
Ensembl chr13:101,727,935...101,761,541
JBrowse link
G Rab1a RAB1A, member RAS oncogene family ISO (PMID:17684057) RGD PMID:17684057 NCBI chr14:104,475,082...104,500,176
Ensembl chr14:104,475,082...104,501,020
JBrowse link
G Sar1a secretion associated, Ras related GTPase 1A ISO (PMID:17499046), (PMID:18843296) RGD PMID:17499046, PMID:18843296 NCBI chr20:31,298,269...31,310,676
Ensembl chr20:31,265,483...31,310,674
JBrowse link
G Scap SREBF chaperone ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 8:118,551,869...118,628,650
Ensembl chr 8:118,570,503...118,628,651
JBrowse link
G Sec13 SEC13 homolog, nuclear pore and COPII coat complex component ISO (PMID:17499046), (PMID:18843296) RGD PMID:17499046, PMID:18843296 NCBI chr 4:145,686,186...145,699,577
Ensembl chr 4:145,686,193...145,699,577
JBrowse link
G Sec23a Sec23 homolog A, COPII coat complex component ISO
IBA
UniProtKB:P15303 (PMID:17499046), (PMID:18843296), (PMID:8898360)
PMID:21873635
RGD PMID:8898360, PMID:17499046, PMID:18843296, PMID:21873635 RGD:13792537 NCBI chr 6:80,059,742...80,107,340
Ensembl chr 6:80,060,916...80,107,236
JBrowse link
G Sec23b Sec23 homolog B, COPII coat complex component IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:138,715,118...138,757,111
Ensembl chr 3:138,715,570...138,757,111
JBrowse link
G Sec24a SEC24 homolog A, COPII coat complex component ISO
IBA
(PMID:17499046), (PMID:18843296)
PMID:21873635
RGD PMID:17499046, PMID:18843296, PMID:21873635 RGD:13792537 NCBI chr10:37,138,539...37,215,899
Ensembl chr10:37,139,806...37,215,899
JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component ISO
IBA
(PMID:17499046), (PMID:18843296)
PMID:21873635
RGD PMID:17499046, PMID:18843296, PMID:21873635 RGD:13792537 NCBI chr 2:230,286,886...230,356,887
Ensembl chr 2:230,287,296...230,356,919
JBrowse link
G Sec24c SEC24 homolog C, COPII coat complex component ISO
IBA
(PMID:17499046), (PMID:18843296)
PMID:21873635
RGD PMID:17499046, PMID:18843296, PMID:21873635 RGD:13792537 NCBI chr15:4,035,196...4,057,209
Ensembl chr15:4,035,196...4,057,157
JBrowse link
G Sec24d SEC24 homolog D, COPII coat complex component ISO
IBA
(PMID:17499046), (PMID:18843296)
PMID:21873635
RGD PMID:17499046, PMID:18843296, PMID:21873635 RGD:13792537 NCBI chr 2:227,455,704...227,562,801
Ensembl chr 2:227,455,722...227,562,319
JBrowse link
G Sec31a SEC31 homolog A, COPII coat complex component IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(PMID:17499046), (PMID:18843296)
Ensembl
RGD
PMID:17499046, PMID:18843296, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr14:10,854,713...10,909,579
Ensembl chr14:10,854,682...10,909,612
JBrowse link
G Sec31b SEC31 homolog B, COPII coat complex component IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:264,266,279...264,294,687
Ensembl chr 1:264,268,338...264,294,630
JBrowse link
G Tbc1d20 TBC1 domain family, member 20 ISO (PMID:17684057) RGD PMID:17684057 NCBI chr 3:147,772,006...147,790,946
Ensembl chr 3:147,772,165...147,789,158
JBrowse link
gamma-aminobutyric acid receptor clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Glrb glycine receptor, beta ISO MGI:95749 (MGI:4365666|PMID:19723286) RGD PMID:19723286 MGI:4365666 NCBI chr 2:179,768,040...179,842,612
Ensembl chr 2:179,769,009...179,842,547
JBrowse link
G Gphn gephyrin IEA
ISO
IBA
ISS
GO_REF:0000107
MGI:95749|MGI:95751 (MGI:4365666|PMID:19723286)
(PMID:25025157), (PMID:26613940)
PMID:21873635
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:19723286, PMID:25025157, PMID:26613940, PMID:21873635 GO_REF:0000024, GO_REF:0000107, MGI:4365666, RGD:13792537 NCBI chr 6:101,327,874...101,859,169
Ensembl chr 6:101,532,518...101,859,164
JBrowse link
G Lhfpl4 LHFPL tetraspan subfamily member 4 ISS
ISO
IBA
GO_REF:0000024
(MGI:6104059|PMID:28978485), (MGI:6114387|PMID:28279354)
PMID:21873635
UniProt
RGD
PMID:28279354, PMID:28978485, PMID:21873635 GO_REF:0000024, MGI:6104059, MGI:6114387, RGD:13792537 NCBI chr 4:145,117,533...145,147,397
Ensembl chr 4:145,117,533...145,147,397
JBrowse link
G Nrxn1 neurexin 1 ISS
ISO
GO_REF:0000024
(MGI:5284797|PMID:15620359)
BHF-UCL
RGD
PMID:15620359 GO_REF:0000024, MGI:5284797 NCBI chr 6:13,886,757...15,191,660
Ensembl chr 6:13,886,740...15,191,660
JBrowse link
G Shisa7 shisa family member 7 ISO (MGI:6377643|PMID:31601770) RGD PMID:31601770 MGI:6377643 NCBI chr 1:72,545,413...72,564,513
Ensembl chr 1:72,545,596...72,564,513
JBrowse link
glutamate receptor clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Glra3 glycine receptor, alpha 3 ISO (MGI:4365666|PMID:19723286) RGD PMID:19723286 MGI:4365666 NCBI chr16:37,676,959...37,908,221
Ensembl chr16:37,676,962...38,063,821
JBrowse link
glycine receptor clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gphn gephyrin IBA
ISO
PMID:21873635
MGI:2182559 (MGI:2182545|PMID:9812897)
RGD PMID:9812897, PMID:21873635 MGI:2182545, RGD:13792537 NCBI chr 6:101,327,874...101,859,169
Ensembl chr 6:101,532,518...101,859,164
JBrowse link
membrane raft distribution term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Naxe NAD(P)HX epimerase ISS
ISO
GO_REF:0000024
ZFIN:ZDB-MRPHLNO-130813-3 (PMID:23719382)
UniProt
RGD
PMID:23719382 GO_REF:0000024 NCBI chr 2:187,424,319...187,426,410
Ensembl chr 2:187,424,327...187,426,375
JBrowse link
membrane raft localization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rala RAS like proto-oncogene A ISO
ISS
(PMID:20005108)
(MGI:4421258|PMID:20005108)
GO_REF:0000024
RGD
UniProt
PMID:20005108 GO_REF:0000024, MGI:4421258 NCBI chr17:49,676,073...49,729,133
Ensembl chr17:49,714,294...49,727,664
JBrowse link
membrane raft polarization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dock2 dedicator of cytokinesis 2 ISO MGI:2152031 (MGI:2668308|PMID:12871644) RGD PMID:12871644 MGI:2668308 NCBI chr10:19,181,512...19,603,171 JBrowse link
negative regulation of cargo loading into COPII-coated vesicle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Insig1 insulin induced gene 1 ISO (PMID:15899885) RGD PMID:15899885 NCBI chr 4:342,302...350,515
Ensembl chr 4:342,302...350,515
JBrowse link
G Sar1a secretion associated, Ras related GTPase 1A ISO (MGI:5496780|PMID:23580231) RGD PMID:23580231 MGI:5496780 NCBI chr20:31,298,269...31,310,676
Ensembl chr20:31,265,483...31,310,674
JBrowse link
negative regulation of skeletal muscle acetylcholine-gated channel clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fzd9 frizzled class receptor 9 ISS
ISO
GO_REF:0000024
(MGI:5805361|PMID:24860427)
UniProt
RGD
PMID:24860427 GO_REF:0000024, MGI:5805361 NCBI chr12:24,473,981...24,476,295
Ensembl chr12:24,473,981...24,476,295
JBrowse link
neurexin clustering involved in presynaptic membrane assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nlgn1 neuroligin 1 ISS
ISO
GO_REF:0000024
(MGI:2665153|PMID:12796785)
BHF-UCL
RGD
PMID:12796785 GO_REF:0000024, MGI:2665153 NCBI chr 2:111,057,291...111,973,681
Ensembl chr 2:111,057,291...111,793,326
JBrowse link
neuroligin clustering involved in postsynaptic membrane assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdh2 cadherin 2 IEA
ISO
GO_REF:0000107
(MGI:4457945|PMID:20534458)
Ensembl
RGD
PMID:20534458 GO_REF:0000107, MGI:4457945 NCBI chr18:8,146,971...8,366,037
Ensembl chr18:8,146,971...8,360,684
JBrowse link
G Magi2 membrane associated guanylate kinase, WW and PDZ domain containing 2 IEA
ISO
GO_REF:0000107
(MGI:4457945|PMID:20534458)
Ensembl
RGD
PMID:20534458 GO_REF:0000107, MGI:4457945 NCBI chr 4:10,995,241...12,472,423
Ensembl chr 4:10,995,234...11,610,518
JBrowse link
G Nrxn1 neurexin 1 ISS
ISO
GO_REF:0000024
(MGI:5284797|PMID:15620359), (MGI:5285129|PMID:21424692)
BHF-UCL
RGD
PMID:15620359, PMID:21424692 GO_REF:0000024, MGI:5284797, MGI:5285129 NCBI chr 6:13,886,757...15,191,660
Ensembl chr 6:13,886,740...15,191,660
JBrowse link
G Nrxn2 neurexin 2 ISS
ISO
GO_REF:0000024
(MGI:5285129|PMID:21424692)
BHF-UCL
RGD
PMID:21424692 GO_REF:0000024, MGI:5285129 NCBI chr 1:221,792,191...221,908,047
Ensembl chr 1:221,792,221...221,908,049
JBrowse link
neurotransmitter-gated ion channel clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrrtm4 leucine rich repeat transmembrane neuronal 4 ISO (MGI:5515242|PMID:23911104) RGD PMID:23911104 MGI:5515242 NCBI chr 4:110,699,577...111,497,643
Ensembl chr 4:110,699,557...111,497,643
JBrowse link
NMDA glutamate receptor clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoe apolipoprotein E ISO
IEA
(PMID:24328732)
GO_REF:0000107
RGD
Ensembl
PMID:24328732 GO_REF:0000107 NCBI chr 1:80,612,894...80,616,820
Ensembl chr 1:80,612,895...80,617,057
JBrowse link
G Htr1a 5-hydroxytryptamine receptor 1A IDA RGD PMID:18442977 RGD:7241017 NCBI chr 2:36,246,628...36,247,896
Ensembl chr 2:36,246,628...36,247,896
JBrowse link
G Nlgn1 neuroligin 1 IDA PMID:19450252 BHF-UCL PMID:19450252 RGD:8553605 NCBI chr 2:111,057,291...111,973,681
Ensembl chr 2:111,057,291...111,793,326
JBrowse link
G Nrxn1 neurexin 1 ISS
ISO
GO_REF:0000024
(MGI:5284797|PMID:15620359)
BHF-UCL
RGD
PMID:15620359 GO_REF:0000024, MGI:5284797 NCBI chr 6:13,886,757...15,191,660
Ensembl chr 6:13,886,740...15,191,660
JBrowse link
G Reln reelin IEA
ISO
GO_REF:0000107
(MGI:5286805|PMID:21664258)
Ensembl
RGD
PMID:21664258 GO_REF:0000107, MGI:5286805 NCBI chr 4:9,347,533...9,774,257
Ensembl chr 4:9,347,528...9,773,670
JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 ISS
ISO
IEA
GO_REF:0000024
(MGI:5013997|PMID:21558424)
GO_REF:0000107
BHF-UCL
RGD
Ensembl
PMID:21558424 GO_REF:0000024, GO_REF:0000107, MGI:5013997 NCBI chr 7:130,474,278...130,534,679
Ensembl chr 7:130,474,279...130,534,679
JBrowse link
nuclear pore localization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ndc1 NDC1 transmembrane nucleoporin ISO (PMID:16600873) RGD PMID:16600873 NCBI chr 5:126,976,636...127,022,941
Ensembl chr 5:126,976,456...127,022,939
JBrowse link
plasma membrane raft distribution term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptprc protein tyrosine phosphatase, receptor type, C ISO UniProtKB:P05480 (MGI:3530407|PMID:15661907) RGD PMID:15661907 MGI:3530407 NCBI chr13:55,061,561...55,174,150
Ensembl chr13:55,061,562...55,173,692
JBrowse link
positive regulation of AMPA glutamate receptor clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dlg4 discs large MAGUK scaffold protein 4 IMP PMID:19596852 UniProt PMID:19596852 RGD:21201259 NCBI chr10:56,625,845...56,655,543
Ensembl chr10:56,627,411...56,653,599
JBrowse link
G Grip2 glutamate receptor interacting protein 2 IMP PMID:20083202 UniProt PMID:20083202 RGD:4107359 NCBI chr 4:123,585,184...123,636,040
Ensembl chr 4:123,586,231...123,636,040
JBrowse link
G Snx27 sorting nexin 27 IMP RGD PMID:25071192 RGD:13508620 NCBI chr 2:195,738,613...195,821,608
Ensembl chr 2:195,738,619...195,821,608
JBrowse link
G Ssh1 slingshot protein phosphatase 1 IMP RGD PMID:20442266 RGD:11535133 NCBI chr12:48,403,184...48,447,964
Ensembl chr12:48,403,797...48,446,977
JBrowse link
G Zdhhc2 zinc finger DHHC-type palmitoyltransferase 2 IMP PMID:19596852 UniProt PMID:19596852 RGD:21201259 NCBI chr16:54,932,546...55,002,322
Ensembl chr16:54,934,056...55,002,322
JBrowse link
positive regulation of receptor clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd81 Cd81 molecule ISS
ISO
IEA
GO_REF:0000024
(MGI:5476553|PMID:23499492)
(PMID:23858057)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:23499492, PMID:23858057 GO_REF:0000024, GO_REF:0000107, MGI:5476553 NCBI chr 1:216,237,663...216,253,460
Ensembl chr 1:216,237,697...216,253,311
JBrowse link
G Tgfb1 transforming growth factor, beta 1 ISO (MGI:5688819|PMID:25065622) RGD PMID:25065622 MGI:5688819 NCBI chr 1:82,480,875...82,497,196
Ensembl chr 1:82,480,195...82,497,199
JBrowse link
positive regulation of skeletal muscle acetylcholine-gated channel clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp4 LDL receptor related protein 4 ISO (MGI:3829843|PMID:18957220) RGD PMID:18957220 MGI:3829843 NCBI chr 3:80,362,643...80,416,684
Ensembl chr 3:80,362,858...80,416,679
JBrowse link
G Lrp5 LDL receptor related protein 5 NOT ISO (MGI:3829843|PMID:18957220) RGD PMID:18957220 MGI:3829843 NCBI chr 1:218,816,833...218,920,147
Ensembl chr 1:218,816,841...218,920,094
JBrowse link
G Mesd mesoderm development LRP chaperone ISS
ISO
GO_REF:0000024
(MGI:5521402|PMID:24140340)
UniProt
RGD
PMID:24140340 GO_REF:0000024, MGI:5521402 NCBI chr 1:146,030,211...146,043,097
Ensembl chr 1:146,037,426...146,043,097
JBrowse link
G Musk muscle associated receptor tyrosine kinase ISO (MGI:3829843|PMID:18957220) RGD PMID:18957220 MGI:3829843 NCBI chr 5:75,392,790...75,498,694
Ensembl chr 5:75,392,790...75,498,694
JBrowse link
G Ptn pleiotrophin IDA RGD PMID:7722643 RGD:9834945 NCBI chr 4:64,239,156...64,330,996
Ensembl chr 4:64,239,158...64,330,996
JBrowse link
postsynaptic neurotransmitter receptor diffusion trapping term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacng2 calcium voltage-gated channel auxiliary subunit gamma 2 IBA
ISO
PMID:21873635
(MGI:5822989|PMID:17329211)
RGD PMID:17329211, PMID:21873635 MGI:5822989, RGD:13792537 NCBI chr 7:119,228,112...119,353,332
Ensembl chr 7:119,228,102...119,352,605
JBrowse link
G Cacng3 calcium voltage-gated channel auxiliary subunit gamma 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:192,613,766...192,708,371
Ensembl chr 1:192,613,372...192,709,078
JBrowse link
G Cacng4 calcium voltage-gated channel auxiliary subunit gamma 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:95,954,160...96,015,484
Ensembl chr10:95,951,234...96,015,499
JBrowse link
G Cacng5 calcium voltage-gated channel auxiliary subunit gamma 5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:96,122,240...96,166,606
Ensembl chr10:96,123,397...96,131,880
JBrowse link
G Cacng7 calcium voltage-gated channel auxiliary subunit gamma 7 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:64,374,547...64,405,380
Ensembl chr 1:64,374,603...64,405,149
JBrowse link
G Cacng8 calcium voltage-gated channel auxiliary subunit gamma 8 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:64,330,106...64,350,338
Ensembl chr 1:64,330,106...64,350,338
JBrowse link
G Camk2a calcium/calmodulin-dependent protein kinase II alpha IMP PMID:24894704 SynGO PMID:24894704 RGD:12050118 NCBI chr18:56,193,978...56,295,869
Ensembl chr18:56,193,978...56,295,869
JBrowse link
G Dlg4 discs large MAGUK scaffold protein 4 IMP
IBA
PMID:17329211
PMID:21873635
SynGO
GO_Central
PMID:17329211, PMID:21873635 RGD:12050129, RGD:13792537 NCBI chr10:56,625,845...56,655,543
Ensembl chr10:56,627,411...56,653,599
JBrowse link
G Gphn gephyrin ISO
IBA
(PMID:24894704)
PMID:21873635
RGD PMID:24894704, PMID:21873635 RGD:13792537 NCBI chr 6:101,327,874...101,859,169
Ensembl chr 6:101,532,518...101,859,164
JBrowse link
G Shisa6 shisa family member 6 ISO (MGI:5805758|PMID:26931375) RGD PMID:26931375 MGI:5805758 NCBI chr10:52,744,069...53,037,853
Ensembl chr10:52,749,846...53,037,816
JBrowse link
protein transport from ciliary membrane to plasma membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arl6 ADP-ribosylation factor like GTPase 6 ISO MGI:5310744 (MGI:5306530|PMID:22139371) RGD PMID:22139371 MGI:5306530 NCBI chr11:42,858,476...42,884,324
Ensembl chr11:42,858,478...42,884,603
JBrowse link
G Rilpl1 Rab interacting lysosomal protein-like 1 ISS
ISO
GO_REF:0000024
(MGI:5507904|PMID:23264467)
UniProt
RGD
PMID:23264467 GO_REF:0000024, MGI:5507904 NCBI chr12:37,490,320...37,528,393
Ensembl chr12:37,490,584...37,528,784
JBrowse link
G Rilpl2 Rab interacting lysosomal protein-like 2 ISS
ISO
GO_REF:0000024
(MGI:5507904|PMID:23264467)
UniProt
RGD
PMID:23264467 GO_REF:0000024, MGI:5507904 NCBI chr12:37,544,918...37,556,453
Ensembl chr12:37,544,918...37,556,453
JBrowse link
protein transport into membrane raft term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Reep2 receptor accessory protein 2 ISO (MGI:4837566|PMID:20943918) RGD PMID:20943918 MGI:4837566 NCBI chr18:27,632,562...27,641,594
Ensembl chr18:27,632,786...27,641,591
JBrowse link
G Rftn1 raftlin lipid raft linker 1 ISO (MGI:3850290|PMID:19414744) RGD PMID:19414744 MGI:3850290 NCBI chr 9:12,740,885...12,942,358
Ensembl chr 9:12,740,885...12,942,358
JBrowse link
protein transport into plasma membrane raft term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clip1 CAP-GLY domain containing linker protein 1 IEA
ISO
GO_REF:0000107
(MGI:3796281|PMID:18511518)
Ensembl
RGD
PMID:18511518 GO_REF:0000107, MGI:3796281 NCBI chr12:38,345,203...38,452,650
Ensembl chr12:38,345,456...38,452,652
JBrowse link
G Tsc2 TSC complex subunit 2 ISO (MGI:3796281|PMID:18511518) RGD PMID:18511518 MGI:3796281 NCBI chr10:13,962,006...13,996,684
Ensembl chr10:13,961,947...13,996,584
JBrowse link
protein transport within lipid bilayer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Itgb1 integrin subunit beta 1 IMP positive regulation of NMDAR lateral diffusion RGD PMID:19420267 RGD:2325331 NCBI chr19:61,677,512...61,725,537
Ensembl chr19:61,677,542...61,725,535
JBrowse link
receptor clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agrn agrin IDA
ISO
IBA
ISS
IEA
PMID:15155732
MGI:103581|MGI:1339975|MGI:1929777|MGI:94941 (MGI:1891559|PMID:11018052), (MGI:1935007|PMID:11395002), (MGI:2384358|PMID:12165471), (MGI:3703100|PMID:17119023)
PMID:21873635
(PMID:15340048), (PMID:9151673)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:9151673, PMID:11018052, PMID:11395002, PMID:12165471, PMID:15340048, PMID:17119023, PMID:15155732, PMID:21873635 GO_REF:0000024, GO_REF:0000107, MGI:1891559, MGI:1935007, MGI:2384358, MGI:3703100, RGD:8554357, RGD:13792537 NCBI chr 5:173,589,910...173,622,813
Ensembl chr 5:173,589,819...173,622,645
JBrowse link
G Akap5 A-kinase anchoring protein 5 ISO (MGI:6378147|PMID:27693258) RGD PMID:27693258 MGI:6378147 NCBI chr 6:99,356,509...99,361,909
Ensembl chr 6:99,356,509...99,361,909
JBrowse link
G Arhgef9 Cdc42 guanine nucleotide exchange factor 9 IDA RGD PMID:10607391 RGD:632270 NCBI chr  X:64,249,576...64,428,444
Ensembl chr  X:64,248,278...64,428,592
JBrowse link
G Cacna1a calcium voltage-gated channel subunit alpha1 A IEA
ISO
GO_REF:0000107
MGI:2181384 (MGI:2654957|PMID:12624181)
Ensembl
RGD
PMID:12624181 GO_REF:0000107, MGI:2654957 NCBI chr19:25,453,236...25,749,550
Ensembl chr19:25,526,751...25,749,550
JBrowse link
G Cdk5 cyclin-dependent kinase 5 ISO MGI:1861809 (MGI:3607648|PMID:16203963) RGD PMID:16203963 MGI:3607648 NCBI chr 4:7,282,945...7,287,427
Ensembl chr 4:7,282,948...7,288,383
JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:72,164,566...72,378,895
Ensembl chr11:72,163,749...72,378,895
JBrowse link
G Dlg2 discs large MAGUK scaffold protein 2 IMP
IBA
PMID:21873635 RGD
GO_Central
PMID:8755482, PMID:21873635 RGD:728660, RGD:13792537 NCBI chr 1:154,916,274...157,274,077
Ensembl chr 1:156,552,328...157,269,747
JBrowse link
G Dlg3 discs large MAGUK scaffold protein 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:70,596,246...70,648,529
Ensembl chr  X:70,596,576...70,648,532
JBrowse link
G Dlg4 discs large MAGUK scaffold protein 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:56,625,845...56,655,543
Ensembl chr10:56,627,411...56,653,599
JBrowse link
G Dok7 docking protein 7 ISO MGI:103581 (MGI:3630229|PMID:16794080) RGD PMID:16794080 MGI:3630229 NCBI chr14:80,925,409...80,963,454
Ensembl chr14:80,926,654...80,958,478
JBrowse link
G Dvl1 dishevelled segment polarity protein 1 ISO MGI:103581|MGI:1339975|MGI:87961 (MGI:2384358|PMID:12165471) RGD PMID:12165471 MGI:2384358 NCBI chr 5:173,295,948...173,308,014
Ensembl chr 5:173,296,270...173,307,945
JBrowse link
G Erbin erbb2 interacting protein IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:33,880,860...33,952,806
Ensembl chr 2:33,881,024...33,920,837
JBrowse link
G Flna filamin A ISO (PMID:10692483) RGD PMID:10692483 NCBI chr  X:156,460,785...156,487,245
Ensembl chr  X:156,463,953...156,487,245
JBrowse link
G Grik2 glutamate ionotropic receptor kainate type subunit 2 IDA PMID:9808460 UniProt PMID:9808460 RGD:8554157 NCBI chr20:53,791,428...54,517,691
Ensembl chr20:53,789,760...54,517,709
JBrowse link
G Grik5 glutamate ionotropic receptor kainate type subunit 5 IDA PMID:9808460 UniProt PMID:9808460 RGD:8554157 NCBI chr 1:81,885,516...81,946,731
Ensembl chr 1:81,885,521...81,946,714
JBrowse link
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B IDA RGD PMID:20008487 RGD:4107026 NCBI chr 4:169,541,620...170,000,216
Ensembl chr 4:169,560,387...169,999,873
JBrowse link
G Itga4 integrin subunit alpha 4 ISO (PMID:23986478) RGD PMID:23986478 NCBI chr 3:66,178,745...66,265,547
Ensembl chr 3:66,193,059...66,263,960
JBrowse link
G Itgal integrin subunit alpha L ISO (PMID:19029120) RGD PMID:19029120 NCBI chr 1:198,744,053...198,781,745
Ensembl chr 1:198,744,050...198,781,750
JBrowse link
G Itgb1bp1 integrin subunit beta 1 binding protein 1 ISO (MGI:5486544|PMID:18227284) RGD PMID:18227284 MGI:5486544 NCBI chr 6:43,348,927...43,363,633
Ensembl chr 6:43,348,958...43,363,335
JBrowse link
G Itgb2 integrin subunit beta 2 ISO (PMID:19029120) RGD PMID:19029120 NCBI chr20:11,777,773...11,815,647
Ensembl chr20:11,777,783...11,815,647
JBrowse link
G Itgb7 integrin subunit beta 7 ISO (PMID:23986478) RGD PMID:23986478 NCBI chr 7:143,820,236...143,837,802
Ensembl chr 7:143,820,900...143,837,780
JBrowse link
G Lrp4 LDL receptor related protein 4 ISO MGI:2661383|MGI:3580702 (MGI:3703100|PMID:17119023) RGD PMID:17119023 MGI:3703100 NCBI chr 3:80,362,643...80,416,684
Ensembl chr 3:80,362,858...80,416,679
JBrowse link
G Lrrc7 leucine rich repeat containing 7 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:264,910,594...265,300,860
Ensembl chr 2:264,910,594...265,300,868
JBrowse link
G Madcam1 mucosal vascular addressin cell adhesion molecule 1 ISO (PMID:23986478) RGD PMID:23986478 NCBI chr 7:12,918,352...12,922,509
Ensembl chr 7:12,918,710...12,922,112
JBrowse link
G Magi2 membrane associated guanylate kinase, WW and PDZ domain containing 2 IDA
IBA
NMDAR2A
PMID:21873635
RGD
GO_Central
PMID:10644767, PMID:21873635 RGD:632272, RGD:13792537 NCBI chr 4:10,995,241...12,472,423
Ensembl chr 4:10,995,234...11,610,518
JBrowse link
G Musk muscle associated receptor tyrosine kinase IMP
ISO
positive regulation of acetylcholine receptor clustering
MGI:1929066|MGI:3584043|MGI:87961|MGI:94941 (MGI:1935007|PMID:11395002), (MGI:2384358|PMID:12165471), (MGI:3630229|PMID:16794080)
RGD PMID:11395002, PMID:12165471, PMID:16794080, PMID:16818610 MGI:1935007, MGI:2384358, MGI:3630229, RGD:2317096 NCBI chr 5:75,392,790...75,498,694
Ensembl chr 5:75,392,790...75,498,694
JBrowse link
G Pak1 p21 (RAC1) activated kinase 1 ISO MGI:87961|MGI:94941 (MGI:2384358|PMID:12165471) RGD PMID:12165471 MGI:2384358 NCBI chr 1:162,768,156...162,883,356
Ensembl chr 1:162,768,156...162,883,355
JBrowse link
G Pick1 protein interacting with PRKCA 1 IMP
ISO
IBA
ISS
PMID:10027300
(MGI:1327089|PMID:9883737)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:9883737, PMID:10027300, PMID:21873635 GO_REF:0000024, MGI:1327089, RGD:69384, RGD:13792537 NCBI chr 7:120,465,472...120,484,824
Ensembl chr 7:120,465,130...120,484,840
JBrowse link
G Pigr polymeric immunoglobulin receptor IEA
ISO
GO_REF:0000107
(PMID:22022593)
Ensembl
RGD
PMID:22022593 GO_REF:0000107 NCBI chr13:47,564,176...47,592,093
Ensembl chr13:47,572,219...47,591,699
JBrowse link
G Ptn pleiotrophin ISS
ISO
GO_REF:0000024
(PMID:27445335)
UniProt
RGD
PMID:27445335 GO_REF:0000024 NCBI chr 4:64,239,156...64,330,996
Ensembl chr 4:64,239,158...64,330,996
JBrowse link
G Sav1 salvador family WW domain containing protein 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:92,376,470...92,398,678
Ensembl chr 6:92,376,093...92,398,525
JBrowse link
G Scrib scribble planar cell polarity protein IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:117,105,810...117,128,802
Ensembl chr 7:117,105,810...117,128,798
JBrowse link
G Syngap1 synaptic Ras GTPase activating protein 1 IEA
ISO
GO_REF:0000107
MGI:3576223 (MGI:3575363|PMID:12598599)
Ensembl
RGD
PMID:12598599 GO_REF:0000107, MGI:3575363 NCBI chr20:5,535,434...5,564,657
Ensembl chr20:5,535,432...5,564,437
JBrowse link
G Synj2bp synaptojanin 2 binding protein IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:105,224,166...105,261,549
Ensembl chr 6:105,224,166...105,261,549
JBrowse link
G Thy1 Thy-1 cell surface antigen IDA PMID:22479590 UniProt PMID:22479590 RGD:12793046 NCBI chr 8:48,382,121...48,387,271
Ensembl chr 8:48,382,121...48,386,935
JBrowse link
regulation of AMPA glutamate receptor clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shank3 SH3 and multiple ankyrin repeat domains 3 IEA
ISO
GO_REF:0000107
MGI:5056336 (MGI:5013997|PMID:21558424)
Ensembl
RGD
PMID:21558424 GO_REF:0000107, MGI:5013997 NCBI chr 7:130,474,278...130,534,679
Ensembl chr 7:130,474,279...130,534,679
JBrowse link
G Shisa6 shisa family member 6 ISO (MGI:5805758|PMID:26931375) RGD PMID:26931375 MGI:5805758 NCBI chr10:52,744,069...53,037,853
Ensembl chr10:52,749,846...53,037,816
JBrowse link
G Shisa7 shisa family member 7 NOT ISO (MGI:6377643|PMID:31601770)
(MGI:6110888|PMID:29199957)
RGD PMID:29199957, PMID:31601770 MGI:6110888, MGI:6377643 NCBI chr 1:72,545,413...72,564,513
Ensembl chr 1:72,545,596...72,564,513
JBrowse link
G Slc7a11 solute carrier family 7 member 11 ISO MGI:3608695 (MGI:5616960|PMID:25429150) RGD PMID:25429150 MGI:5616960 NCBI chr 2:139,453,774...139,528,479
Ensembl chr 2:139,453,774...139,528,162
JBrowse link
regulation of cargo loading into COPII-coated vesicle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sar1a secretion associated, Ras related GTPase 1A ISO (MGI:4438817|PMID:19966784) RGD PMID:19966784 MGI:4438817 NCBI chr20:31,298,269...31,310,676
Ensembl chr20:31,265,483...31,310,674
JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component ISO MGI:4440619|MGI:4440621 (MGI:4438817|PMID:19966784) RGD PMID:19966784 MGI:4438817 NCBI chr 2:230,286,886...230,356,887
Ensembl chr 2:230,287,296...230,356,919
JBrowse link
regulation of plasma membrane raft polarization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gsn gelsolin ISO (PMID:23575248) RGD PMID:23575248 NCBI chr 3:14,456,106...14,508,922
Ensembl chr 3:14,467,330...14,508,911
JBrowse link
regulation of receptor clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gsn gelsolin ISO (PMID:23575248) RGD PMID:23575248 NCBI chr 3:14,456,106...14,508,922
Ensembl chr 3:14,467,330...14,508,911
JBrowse link
regulation of skeletal muscle acetylcholine-gated channel clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crkl CRK like proto-oncogene, adaptor protein ISO MGI:1924574|MGI:700014 (MGI:5803938|PMID:26527617) RGD PMID:26527617 MGI:5803938 NCBI chr11:87,338,606...87,356,644
Ensembl chr11:87,778,312...87,815,043
JBrowse link
G Fzd9 frizzled class receptor 9 ISS
ISO
GO_REF:0000024
(MGI:5805361|PMID:24860427)
UniProt
RGD
PMID:24860427 GO_REF:0000024, MGI:5805361 NCBI chr12:24,473,981...24,476,295
Ensembl chr12:24,473,981...24,476,295
JBrowse link
G Sorbs1 sorbin and SH3 domain containing 1 ISO MGI:104686|MGI:1924574 (MGI:5803938|PMID:26527617) RGD PMID:26527617 MGI:5803938 NCBI chr 1:259,373,921...259,502,108
Ensembl chr 1:259,376,933...259,484,569
JBrowse link
G Sorbs2 sorbin and SH3 domain containing 2 ISO MGI:104686|MGI:700014 (MGI:5803938|PMID:26527617) RGD PMID:26527617 MGI:5803938 NCBI chr16:49,626,205...49,820,223
Ensembl chr16:49,626,205...49,820,235
JBrowse link
skeletal muscle acetylcholine-gated channel clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agrn agrin IMP
IDA
PMID:22302937
PMID:18957220
UniProt PMID:22302937, PMID:18957220 RGD:8553690, RGD:10047261 NCBI chr 5:173,589,910...173,622,813
Ensembl chr 5:173,589,819...173,622,645
JBrowse link
G Colq collagen like tail subunit of asymmetric acetylcholinesterase IEA
ISO
GO_REF:0000107
MGI:1857733 (MGI:4431306|PMID:20053883)
Ensembl
RGD
PMID:20053883 GO_REF:0000107, MGI:4431306 NCBI chr16:7,626,380...7,681,621
Ensembl chr16:7,627,603...7,681,576
JBrowse link
G Dnaja3 DnaJ heat shock protein family (Hsp40) member A3 ISO (MGI:3835221|PMID:19038220) RGD PMID:19038220 MGI:3835221 NCBI chr10:11,059,701...11,085,186
Ensembl chr10:11,060,313...11,085,210
JBrowse link
G Dvl1 dishevelled segment polarity protein 1 ISO MGI:2137230 (MGI:3821410|PMID:19020093) RGD PMID:19020093 MGI:3821410 NCBI chr 5:173,295,948...173,308,014
Ensembl chr 5:173,296,270...173,307,945
JBrowse link
G Etv5 ETS variant transcription factor 5 ISO MGI:3589421 (MGI:3762055|PMID:17785180) RGD PMID:17785180 MGI:3762055 NCBI chr11:82,194,657...82,252,145
Ensembl chr11:82,194,657...82,252,139
JBrowse link
G Fnta farnesyltransferase, CAAX box, alpha IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr16:70,834,957...70,854,724
Ensembl chr16:70,834,957...70,854,724
JBrowse link
G Lrp4 LDL receptor related protein 4 ISS
ISO
GO_REF:0000024
(MGI:5295488|PMID:22038977), (MGI:5439235|PMID:22854782)
UniProt
RGD
PMID:22038977, PMID:22854782 GO_REF:0000024, MGI:5295488, MGI:5439235 NCBI chr 3:80,362,643...80,416,684
Ensembl chr 3:80,362,858...80,416,679
JBrowse link
G Musk muscle associated receptor tyrosine kinase ISO (MGI:2663717|PMID:11323662) RGD PMID:11323662 MGI:2663717 NCBI chr 5:75,392,790...75,498,694
Ensembl chr 5:75,392,790...75,498,694
JBrowse link
G Rer1 retention in endoplasmic reticulum sorting receptor 1 ISO MGI:4329578 (MGI:4940949|PMID:21187406) RGD PMID:21187406 MGI:4940949 NCBI chr 5:172,476,746...172,488,822
Ensembl chr 5:172,476,747...172,488,822
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20020
    localization 6478
      cellular localization 2966
        localization within membrane 112
          COPII-coated vesicle cargo loading + 15
          membrane raft localization + 5
          nuclear pore localization 1
          protein transport within lipid bilayer + 9
          receptor clustering + 73
          receptor diffusion trapping + 10
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.