Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:biological process involved in interaction with symbiont
go back to main search page
Accession:GO:0051702 term browser browse the term
Definition:An interaction between two organisms living together in more or less intimate association. The term symbiont is used for the smaller (macro) of the two members of a symbiosis; the various forms of symbiosis include parasitism, commensalism and mutualism.
Synonyms:related_synonym: interaction with symbiont


show annotations for term's descendants           Sort by:
 
biological process involved in interaction with symbiont term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DDB1 damage specific DNA binding protein 1 ISO (PMID:23137809) AgBase PMID:23137809 NCBI chr11:56,599,422...56,633,140
Ensembl chr11:59,964,235...59,997,805
JBrowse link
G FN1 fibronectin 1 ISO (PMID:12167537), (PMID:12421310), (PMID:19429745) CAFA PMID:12167537, PMID:12421310, PMID:19429745 NCBI chr2B:102,623,568...102,698,747
Ensembl chr2B:221,208,431...221,284,003
JBrowse link
G GPX1 glutathione peroxidase 1 ISO (MGI:3608474|PMID:12751789) MGI PMID:12751789 MGI:3608474 NCBI chr 3:49,280,038...49,281,455
Ensembl chr 3:50,360,947...50,361,826
JBrowse link
G GPX2 glutathione peroxidase 2 ISO (MGI:3608474|PMID:12751789) MGI PMID:12751789 MGI:3608474 NCBI chr14:45,522,558...45,526,678 JBrowse link
G HSPD1 heat shock protein family D (Hsp60) member 1 ISO (PMID:20507888) CAFA PMID:20507888 NCBI chr2B:84,729,615...84,743,352
Ensembl chr2B:202,623,497...202,636,959
JBrowse link
G LOC100982214 plasminogen ISO (PMID:12818429) CAFA PMID:12818429 NCBI chr 6:158,662,192...158,713,413
Ensembl chr 6:163,673,464...163,736,777
JBrowse link
catabolism by host of symbiont cell wall chitin term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHIA chitinase acidic ISO (MGI:1931335|PMID:11085997) UniProt PMID:11085997 MGI:1931335 NCBI chr 1:113,935,888...113,965,541
Ensembl chr 1:126,381,724...126,391,909
JBrowse link
catabolism by host of symbiont protein term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANXA2 annexin A2 ISO (PMID:26812398) AgBase PMID:26812398 NCBI chr15:39,322,303...39,371,565
Ensembl chr15:57,625,425...57,674,250
JBrowse link
cytolysis by host of symbiont cells term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAMP cathelicidin antimicrobial peptide ISO (PMID:20421939) UniProt PMID:20421939 NCBI chr 3:48,137,785...48,139,893
Ensembl chr 3:49,222,110...49,224,250
JBrowse link
G CFHR1 complement factor H related 1 ISO (PMID:23487775) UniProt PMID:23487775 NCBI chr 1:172,267,658...172,337,130 JBrowse link
G CFHR2 complement factor H related 2 ISO (PMID:23487775) UniProt PMID:23487775 NCBI chr 1:172,481,728...172,522,715 JBrowse link
G CFHR5 complement factor H related 5 ISO (PMID:23487775) UniProt PMID:23487775 NCBI chr 1:172,541,948...172,574,591
Ensembl chr 1:176,876,635...176,908,723
JBrowse link
G F2 coagulation factor II, thrombin ISO (PMID:20421939) UniProtKB PMID:20421939 NCBI chr11:46,669,925...46,690,391
Ensembl chr11:47,227,891...47,249,157
JBrowse link
G HRG histidine rich glycoprotein ISO (PMID:18797515) UniProt PMID:18797515 NCBI chr 3:183,701,069...183,712,365
Ensembl chr 3:192,168,299...192,180,539
JBrowse link
G KRT6A keratin 6A ISO (PMID:23006328) UniProt PMID:23006328 NCBI chr12:36,270,961...36,277,035
Ensembl chr12:37,048,390...37,054,607
JBrowse link
G REG3G regenerating family member 3 gamma ISO (PMID:16931762)
(MGI:5897756|PMID:16931762)
UniProt PMID:16931762 MGI:5897756 NCBI chr2A:79,116,083...79,118,886
Ensembl chr2A:80,680,615...80,683,748
JBrowse link
G ROMO1 reactive oxygen species modulator 1 ISO (PMID:22083756) UniProt PMID:22083756 NCBI chr20:32,026,660...32,028,314
Ensembl chr20:33,148,002...33,149,345
JBrowse link
G SPAG11A sperm associated antigen 11A ISO (PMID:16411022) UniProt PMID:16411022 NCBI chr 8:11,094,358...11,110,481 JBrowse link
host-mediated regulation of intestinal microbiota composition term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LRRC19 leucine rich repeat containing 19 ISO (MGI:6204559|PMID:26776522) UniProt PMID:26776522 MGI:6204559 NCBI chr 9:26,839,225...26,845,937
Ensembl chr 9:27,445,701...27,458,085
JBrowse link
G NAPEPLD N-acyl phosphatidylethanolamine phospholipase D ISO (MGI:5641800|PMID:25757720) UniProt PMID:25757720 MGI:5641800 NCBI chr 7:95,074,084...95,123,936
Ensembl chr 7:107,923,960...107,973,269
JBrowse link
killing by host of symbiont cells term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAMP cathelicidin antimicrobial peptide ISO (PMID:16020269), (PMID:16177355)
(MGI:3611523|PMID:16177355)
CACAO
MGI
PMID:16020269, PMID:16177355 MGI:3611523 NCBI chr 3:48,137,785...48,139,893
Ensembl chr 3:49,222,110...49,224,250
JBrowse link
G DCD dermcidin ISO (PMID:15670776) CACAO PMID:15670776 NCBI chr12:34,099,063...34,102,968
Ensembl chr12:34,826,958...34,830,859
JBrowse link
G DEFB103A defensin beta 103A ISO (PMID:16436752) CACAO PMID:16436752 NCBI chr 8:11,075,686...11,077,616 JBrowse link
G GAPDH glyceraldehyde-3-phosphate dehydrogenase ISO (PMID:22832495) UniProtKB PMID:22832495 NCBI chr12:6,665,218...6,669,170
Ensembl chr12:6,583,895...6,587,729
JBrowse link
G LOC100991118 defensin-5 ISO (PMID:9169780) CACAO PMID:9169780 NCBI chr 8:264,298...265,962 JBrowse link
G MBL2 mannose binding lectin 2 ISO (MGI:3577322|PMID:15148336) MGI PMID:15148336 MGI:3577322 NCBI chr10:49,401,364...49,409,328
Ensembl chr10:51,527,758...51,543,432
JBrowse link
G PF4 platelet factor 4 ISO (PMID:23245326) UniProtKB PMID:23245326 NCBI chr 4:50,208,806...50,210,570
Ensembl chr 4:56,041,833...56,043,750
JBrowse link
maintenance of symbiont-containing vacuole by host term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AQP1 aquaporin 1 (Colton blood group) ISO (PMID:18665841)
(MGI:4457239|PMID:18665841)
UniProtKB
UniProt
PMID:18665841 MGI:4457239 NCBI chr 7:31,524,933...31,538,602 JBrowse link
modulation by host of RNA binding by virus term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUCKS1 nuclear casein kinase and cyclin dependent kinase substrate 1 ISO (PMID:25116364) ParkinsonsUK-UCL PMID:25116364 NCBI chr 1:181,322,760...181,359,321
Ensembl chr 1:185,606,796...185,642,984
JBrowse link
modulation by host of viral genome replication term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IFI27 interferon alpha inducible protein 27 ISO (PMID:27777077) UniProt PMID:27777077 NCBI chr14:74,742,775...74,748,820
Ensembl chr14:94,046,694...94,082,022
JBrowse link
modulation by host of viral process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HSPA8 heat shock protein family A (Hsp70) member 8 ISO (MGI:5787727|PMID:26581985) AgBase PMID:26581985 MGI:5787727 NCBI chr11:117,890,545...117,895,262
Ensembl chr11:121,809,800...121,815,773
JBrowse link
modulation by host of viral RNA genome replication term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FBXL2 F-box and leucine rich repeat protein 2 ISO (PMID:15893726) UniProtKB PMID:15893726 NCBI chr 3:33,199,436...33,308,831
Ensembl chr 3:33,501,525...33,610,039
JBrowse link
G FMR1 FMRP translational regulator 1 ISO (PMID:24514761) UniProtKB PMID:24514761 NCBI chr  X:136,937,889...136,976,828
Ensembl chr  X:147,365,748...147,405,321
JBrowse link
G PHB prohibitin ISO (MGI:6436975|PMID:29324904) UniProt PMID:29324904 MGI:6436975 NCBI chr17:8,189,555...8,200,491
Ensembl chr17:8,175,968...8,186,790
JBrowse link
G VAPB VAMP associated protein B and C ISO (PMID:19515777) AgBase PMID:19515777 NCBI chr20:54,736,035...54,798,155
Ensembl chr20:56,010,782...56,064,363
JBrowse link
modulation by host of viral RNA-binding transcription factor activity term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUCKS1 nuclear casein kinase and cyclin dependent kinase substrate 1 ISO (PMID:25116364) ParkinsonsUK-UCL PMID:25116364 NCBI chr 1:181,322,760...181,359,321
Ensembl chr 1:185,606,796...185,642,984
JBrowse link
modulation by host of viral transcription term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PSMC3 proteasome 26S subunit, ATPase 3 ISO (PMID:2194290), (PMID:8419915) GO_Central PMID:2194290, PMID:8419915 NCBI chr11:47,366,986...47,374,677
Ensembl chr11:47,920,295...47,927,654
JBrowse link
negative regulation by host of symbiont molecular function term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANXA2 annexin A2 ISO (PMID:26812398) AgBase PMID:26812398 NCBI chr15:39,322,303...39,371,565
Ensembl chr15:57,625,425...57,674,250
JBrowse link
G RAB9A RAB9A, member RAS oncogene family ISO (PMID:18787122) AgBase PMID:18787122 NCBI chr  X:6,296,483...6,317,826
Ensembl chr  X:13,604,454...13,605,059
JBrowse link
G SFTPD surfactant protein D ISO (PMID:28228557) AgBase PMID:28228557 NCBI chr10:76,275,147...76,318,952
Ensembl chr10:78,965,252...78,974,181
JBrowse link
negative regulation by host of viral exo-alpha-sialidase activity term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APCS amyloid P component, serum ISO (PMID:23544079) BHF-UCL PMID:23544079 NCBI chr 1:134,937,472...134,938,512
Ensembl chr 1:138,734,046...138,735,093
JBrowse link
G PTX3 pentraxin 3 ISO (PMID:23544079) BHF-UCL PMID:23544079 NCBI chr 3:154,485,470...154,492,293
Ensembl chr 3:162,537,577...162,543,652
JBrowse link
negative regulation by host of viral genome replication term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCL8 C-C motif chemokine ligand 8 ISO (PMID:20181935) ARUK-UCL PMID:20181935 NCBI chr17:22,468,080...22,470,443
Ensembl chr17:22,761,064...22,763,933
JBrowse link
G CCNK cyclin K ISO (PMID:21555514) CACAO PMID:21555514 NCBI chr14:80,105,372...80,136,511
Ensembl chr14:99,438,814...99,480,842
JBrowse link
G CEACAM1 CEA cell adhesion molecule 1 ISO (MGI:55926|PMID:6327825) MGI PMID:6327825 MGI:55926 NCBI chr19:39,395,550...39,417,063 JBrowse link
G DDX3X DEAD-box helicase 3 X-linked ISO (PMID:24380861) AgBase PMID:24380861 NCBI chr  X:33,780,381...33,796,829
Ensembl chr  X:41,475,116...41,505,837
JBrowse link
G EIF2AK4 eukaryotic translation initiation factor 2 alpha kinase 4 ISO (MGI:5700304|PMID:16601681) UniProt PMID:16601681 MGI:5700304 NCBI chr15:18,871,867...18,973,380
Ensembl chr15:37,120,044...37,229,211
JBrowse link
G PRKN parkin RBR E3 ubiquitin protein ligase ISO (PMID:25244949) AgBase PMID:25244949 NCBI chr 6:159,293,016...160,679,106
Ensembl chr 6:164,314,990...165,678,770
JBrowse link
G VAPA VAMP associated protein A ISO (PMID:19515777) AgBase PMID:19515777 NCBI chr18:4,329,479...4,373,047
Ensembl chr18:6,612,105...6,637,829
JBrowse link
G VAPB VAMP associated protein B and C ISO (PMID:19515777) AgBase PMID:19515777 NCBI chr20:54,736,035...54,798,155
Ensembl chr20:56,010,782...56,064,363
JBrowse link
G ZBED1 zinc finger BED-type containing 1 ISO (PMID:25210186) UniProt PMID:25210186 Ensembl chr  X:2,441,985...2,444,069 JBrowse link
G ZC3H12A zinc finger CCCH-type containing 12A ISO (PMID:23355615) UniProtKB PMID:23355615 NCBI chr 1:36,743,341...36,753,261
Ensembl chr 1:38,093,917...38,103,556
JBrowse link
negative regulation by host of viral glycoprotein metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APCS amyloid P component, serum ISO (PMID:23544079) BHF-UCL PMID:23544079 NCBI chr 1:134,937,472...134,938,512
Ensembl chr 1:138,734,046...138,735,093
JBrowse link
G PTX3 pentraxin 3 ISO (PMID:23544079) BHF-UCL PMID:23544079 NCBI chr 3:154,485,470...154,492,293
Ensembl chr 3:162,537,577...162,543,652
JBrowse link
negative regulation by host of viral process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CEACAM1 CEA cell adhesion molecule 1 ISO (MGI:3848729|PMID:19358828)
(MGI:1098064|PMID:9343248)
(MGI:2148352|PMID:11483763)
MGI PMID:9343248, PMID:11483763, PMID:19358828 MGI:1098064, MGI:2148352, MGI:3848729 NCBI chr19:39,395,550...39,417,063 JBrowse link
G LTF lactotransferrin ISO (PMID:12522210) AgBase PMID:12522210 NCBI chr 3:46,337,738...46,367,476
Ensembl chr 3:47,442,440...47,471,532
JBrowse link
negative regulation by host of viral release from host cell term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G VAPB VAMP associated protein B and C ISO (PMID:19515777) AgBase PMID:19515777 NCBI chr20:54,736,035...54,798,155
Ensembl chr20:56,010,782...56,064,363
JBrowse link
negative regulation by host of viral transcription term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCL5 C-C motif chemokine ligand 5 ISO (PMID:10841574) UniProtKB PMID:10841574 NCBI chr17:20,915,198...20,923,530
Ensembl chr17:21,210,798...21,219,172
JBrowse link
G HDAC1 histone deacetylase 1 ISO (PMID:16540471) UniProtKB PMID:16540471 NCBI chr 1:31,578,373...31,619,970
Ensembl chr 1:32,585,791...32,626,410
JBrowse link
G HMGA2 high mobility group AT-hook 2 ISO (PMID:17005673) UniProtKB PMID:17005673 NCBI chr12:22,954,946...23,096,623 JBrowse link
G HMOX1 heme oxygenase 1 ISO (PMID:25086213) AgBase PMID:25086213 NCBI chr22:16,388,368...16,401,289
Ensembl chr22:34,230,825...34,244,063
JBrowse link
G INPP5K inositol polyphosphate-5-phosphatase K ISO (PMID:18774950) UniProtKB PMID:18774950 NCBI chr17:1,477,511...1,499,765
Ensembl chr17:1,377,312...1,399,373
JBrowse link
G JUN Jun proto-oncogene, AP-1 transcription factor subunit ISO (PMID:2833704) UniProtKB PMID:2833704 NCBI chr 1:58,042,794...58,045,536 JBrowse link
G POU2F3 POU class 2 homeobox 3 ISO (PMID:14645924) UniProtKB PMID:14645924 NCBI chr11:115,075,399...115,156,307
Ensembl chr11:119,001,408...119,082,531
JBrowse link
G REST RE1 silencing transcription factor ISO (PMID:17555596) UniProtKB PMID:17555596 NCBI chr 4:66,984,466...67,012,301
Ensembl chr 4:73,526,085...73,582,242
JBrowse link
G TARDBP TAR DNA binding protein ISO (PMID:7745706) BHF-UCL PMID:7745706 NCBI chr 1:9,775,084...9,786,710
Ensembl chr 1:10,996,006...11,008,732
JBrowse link
G TFAP4 transcription factor AP-4 ISO (PMID:14645924), (PMID:16540471) UniProtKB PMID:14645924, PMID:16540471 NCBI chr16:3,176,129...3,226,404
Ensembl chr16:4,348,929...4,368,525
JBrowse link
G ZNF639 zinc finger protein 639 ISO (PMID:20484494) UniProtKB PMID:20484494 NCBI chr 3:176,353,400...176,366,142
Ensembl chr 3:184,533,061...184,539,270
JBrowse link
neutrophil-mediated killing of bacterium term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AZU1 azurocidin 1 ISO (PMID:2312733) UniProtKB PMID:2312733 NCBI chr19:300,318...304,730
Ensembl chr19:797,038...800,691
JBrowse link
neutrophil-mediated killing of fungus term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ELANE elastase, neutrophil expressed ISO (MGI:4353632|PMID:11907569) MGI PMID:11907569 MGI:4353632 NCBI chr19:276,499...280,598 JBrowse link
G NCF1 neutrophil cytosolic factor 1 ISO (MGI:4353632|PMID:11907569) MGI PMID:11907569 MGI:4353632 Ensembl chr 7:81,917,167...81,932,589 JBrowse link
neutrophil-mediated killing of gram-negative bacterium term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ELANE elastase, neutrophil expressed ISO (PMID:20421939) UniProtKB PMID:20421939 NCBI chr19:276,499...280,598 JBrowse link
G F2 coagulation factor II, thrombin ISO (PMID:20421939) UniProtKB PMID:20421939 NCBI chr11:46,669,925...46,690,391
Ensembl chr11:47,227,891...47,249,157
JBrowse link
G TREM1 triggering receptor expressed on myeloid cells 1 ISO (MGI:5471912|PMID:23241959) MGI PMID:23241959 MGI:5471912 NCBI chr 6:40,861,283...40,874,446
Ensembl chr 6:42,163,337...42,183,091
JBrowse link
G TUSC2 tumor suppressor 2, mitochondrial calcium regulator ISO (MGI:5518492|PMID:24042119) MGI PMID:24042119 MGI:5518492 NCBI chr 3:50,251,034...50,254,351
Ensembl chr 3:51,486,641...51,489,962
JBrowse link
neutrophil-mediated killing of gram-positive bacterium term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTSG cathepsin G ISO (MGI:4353632|PMID:11907569) MGI PMID:11907569 MGI:4353632 NCBI chr14:5,342,517...5,345,218
Ensembl chr14:23,466,265...23,468,960
JBrowse link
G NCF1 neutrophil cytosolic factor 1 ISO (MGI:4353632|PMID:11907569) MGI PMID:11907569 MGI:4353632 Ensembl chr 7:81,917,167...81,932,589 JBrowse link
positive regulation by host of symbiont catalytic activity term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SUGT1 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone ISO (PMID:23935490) AgBase PMID:23935490 NCBI chr13:33,688,941...33,724,687
Ensembl chr13:52,497,557...52,532,434
JBrowse link
positive regulation by host of viral genome replication term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HSPA8 heat shock protein family A (Hsp70) member 8 ISO (MGI:5787727|PMID:26581985) AgBase PMID:26581985 MGI:5787727 NCBI chr11:117,890,545...117,895,262
Ensembl chr11:121,809,800...121,815,773
JBrowse link
G NUCKS1 nuclear casein kinase and cyclin dependent kinase substrate 1 ISO (PMID:25116364) ParkinsonsUK-UCL PMID:25116364 NCBI chr 1:181,322,760...181,359,321
Ensembl chr 1:185,606,796...185,642,984
JBrowse link
G PPIB peptidylprolyl isomerase B ISO (PMID:15989969) AgBase PMID:15989969 NCBI chr15:43,108,139...43,115,470
Ensembl chr15:61,400,272...61,406,758
JBrowse link
G STOM stomatin ISO (MGI:5616479|PMID:25262680) AgBase PMID:25262680 MGI:5616479 NCBI chr 9:92,466,718...92,498,265
Ensembl chr 9:120,812,065...120,843,497
JBrowse link
G TBC1D20 TBC1 domain family member 20 ISO (PMID:17686842) AgBase PMID:17686842 NCBI chr20:644,646...670,860
Ensembl chr20:414,066...431,032
JBrowse link
G VAPA VAMP associated protein A ISO (PMID:19515777) AgBase PMID:19515777 NCBI chr18:4,329,479...4,373,047
Ensembl chr18:6,612,105...6,637,829
JBrowse link
G VAPB VAMP associated protein B and C ISO (PMID:19515777) AgBase PMID:19515777 NCBI chr20:54,736,035...54,798,155
Ensembl chr20:56,010,782...56,064,363
JBrowse link
G YTHDC2 YTH domain containing 2 ISO (PMID:21559518) AgBase PMID:21559518 NCBI chr 5:108,870,417...108,951,848
Ensembl chr 5:114,672,839...114,754,153
JBrowse link
positive regulation by host of viral process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANXA2 annexin A2 ISO (PMID:25593157) AgBase PMID:25593157 NCBI chr15:39,322,303...39,371,565
Ensembl chr15:57,625,425...57,674,250
JBrowse link
G APOE apolipoprotein E ISO (PMID:25122793) AgBase PMID:25122793 NCBI chr19:41,853,669...41,857,252
Ensembl chr19:50,459,906...50,463,490
JBrowse link
G CAV2 caveolin 2 ISO (PMID:25556234) AgBase PMID:25556234 NCBI chr 7:108,254,074...108,480,716
Ensembl chr 7:121,168,579...121,177,415
JBrowse link
G CEACAM1 CEA cell adhesion molecule 1 ISO (MGI:2148352|PMID:11483763)
(MGI:1098064|PMID:9343248)
MGI PMID:9343248, PMID:11483763 MGI:1098064, MGI:2148352 NCBI chr19:39,395,550...39,417,063 JBrowse link
G CFL1 cofilin 1 ISO (PMID:25556234) AgBase PMID:25556234 NCBI chr11:61,215,092...61,218,628
Ensembl chr11:64,544,275...64,550,806
JBrowse link
G CSF1R colony stimulating factor 1 receptor ISO (MGI:4840165|PMID:20889566) ARUK-UCL PMID:20889566 MGI:4840165 NCBI chr 5:145,478,725...145,537,858
Ensembl chr 5:151,483,572...151,517,415
JBrowse link
G IFNG interferon gamma ISO (MGI:4840165|PMID:20889566) ARUK-UCL PMID:20889566 MGI:4840165 NCBI chr12:65,663,764...65,668,732
Ensembl chr12:68,448,861...68,453,829
JBrowse link
G IGF2R insulin like growth factor 2 receptor ISO (PMID:20889566) ARUK-UCL PMID:20889566 NCBI chr 6:157,852,565...157,990,049
Ensembl chr 6:162,878,661...162,997,762
JBrowse link
G PC pyruvate carboxylase ISO (PMID:23861867) AgBase PMID:23861867 NCBI chr11:62,205,644...62,317,917
Ensembl chr11:65,527,662...65,551,396
JBrowse link
G PPIB peptidylprolyl isomerase B ISO (PMID:15989969) AgBase PMID:15989969 NCBI chr15:43,108,139...43,115,470
Ensembl chr15:61,400,272...61,406,758
JBrowse link
G ZNF502 zinc finger protein 502 ISO (PMID:25556234) AgBase PMID:25556234 NCBI chr 3:44,607,484...44,618,977
Ensembl chr 3:45,665,147...45,676,361
JBrowse link
positive regulation by host of viral release from host cell term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAV2 caveolin 2 ISO (PMID:25556234) AgBase PMID:25556234 NCBI chr 7:108,254,074...108,480,716
Ensembl chr 7:121,168,579...121,177,415
JBrowse link
G PC pyruvate carboxylase ISO (PMID:23861867) AgBase PMID:23861867 NCBI chr11:62,205,644...62,317,917
Ensembl chr11:65,527,662...65,551,396
JBrowse link
G VAPA VAMP associated protein A ISO (PMID:19515777) AgBase PMID:19515777 NCBI chr18:4,329,479...4,373,047
Ensembl chr18:6,612,105...6,637,829
JBrowse link
G VAPB VAMP associated protein B and C ISO (PMID:19515777) AgBase PMID:19515777 NCBI chr20:54,736,035...54,798,155
Ensembl chr20:56,010,782...56,064,363
JBrowse link
G ZNF502 zinc finger protein 502 ISO (PMID:25556234) AgBase PMID:25556234 NCBI chr 3:44,607,484...44,618,977
Ensembl chr 3:45,665,147...45,676,361
JBrowse link
positive regulation by host of viral transcription term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHD1 chromodomain helicase DNA binding protein 1 ISO (PMID:25297984) CACAO PMID:25297984 NCBI chr 5:94,165,414...94,238,836
Ensembl chr 5:99,721,032...99,790,263
JBrowse link
G CTDP1 CTD phosphatase subunit 1 ISO (PMID:15723517) CAFA PMID:15723517 NCBI chr18:73,279,510...73,357,718
Ensembl chr18:76,646,641...76,722,573
JBrowse link
G EP300 E1A binding protein p300 ISO (PMID:16687403) BHF-UCL PMID:16687403 NCBI chr22:21,986,467...22,076,921
Ensembl chr22:40,079,503...40,168,604
JBrowse link
G FKBP8 FKBP prolyl isomerase 8 ISO (PMID:26748656) AgBase PMID:26748656 NCBI chr19:18,009,505...18,021,772
Ensembl chr19:18,980,269...18,992,170
JBrowse link
G HPN hepsin ISO (PMID:15614436) UniProtKB PMID:15614436 NCBI chr19:31,985,761...32,012,841
Ensembl chr19:40,725,319...40,750,628
JBrowse link
G JUN Jun proto-oncogene, AP-1 transcription factor subunit ISO (PMID:2833704) UniProtKB PMID:2833704 NCBI chr 1:58,042,794...58,045,536 JBrowse link
G LEF1 lymphoid enhancer binding factor 1 ISO (PMID:7657162) UniProtKB PMID:7657162 NCBI chr 4:100,552,959...100,674,156
Ensembl chr 4:111,125,312...111,245,980
JBrowse link
G NUCKS1 nuclear casein kinase and cyclin dependent kinase substrate 1 ISO (PMID:25116364) ParkinsonsUK-UCL PMID:25116364 NCBI chr 1:181,322,760...181,359,321
Ensembl chr 1:185,606,796...185,642,984
JBrowse link
G RRP1B ribosomal RNA processing 1B ISO (PMID:26311876) UniProtKB PMID:26311876 NCBI chr21:29,916,109...29,952,749
Ensembl chr21:43,217,516...43,251,192
JBrowse link
G SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 ISO (PMID:16687403) BHF-UCL PMID:16687403 NCBI chr19:10,515,216...10,616,155
Ensembl chr19:11,250,006...11,334,952
JBrowse link
G SMARCB1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 ISO (PMID:16687403) BHF-UCL PMID:16687403 NCBI chr22:4,542,764...4,589,461
Ensembl chr22:22,627,982...22,673,921
JBrowse link
G SNW1 SNW domain containing 1 ISO (PMID:19818711)
(PMID:15905409)
UniProtKB PMID:15905409, PMID:19818711 NCBI chr14:58,271,830...58,315,773
Ensembl chr14:77,472,387...77,517,315
JBrowse link
G SP1 Sp1 transcription factor ISO (PMID:2833704) UniProtKB PMID:2833704 NCBI chr12:35,338,492...35,374,462
Ensembl chr12:36,127,681...36,158,356
JBrowse link
G TAF11 TATA-box binding protein associated factor 11 ISO (PMID:9108034) UniProtKB PMID:9108034 NCBI chr 6:34,439,369...34,449,501
Ensembl chr 6:35,536,614...35,546,805
JBrowse link
G TFAP4 transcription factor AP-4 ISO (PMID:2833704) UniProtKB PMID:2833704 NCBI chr16:3,176,129...3,226,404
Ensembl chr16:4,348,929...4,368,525
JBrowse link
G ZNF639 zinc finger protein 639 ISO (PMID:20484494) UniProtKB PMID:20484494 NCBI chr 3:176,353,400...176,366,142
Ensembl chr 3:184,533,061...184,539,270
JBrowse link
positive regulation of neutrophil mediated killing of fungus term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARG1 arginase 1 ISO (PMID:15546957) UniProtKB PMID:15546957 NCBI chr 6:129,372,747...129,383,880
Ensembl chr 6:133,479,966...133,491,162
JBrowse link
G CXCL1 C-X-C motif chemokine ligand 1 ISO (MGI:5586806|PMID:10725737) UniProt PMID:10725737 MGI:5586806 NCBI chr 4:50,325,248...50,327,165
Ensembl chr 4:56,153,899...56,159,474
JBrowse link
G POMC proopiomelanocortin ISO (PMID:10670585) UniProt PMID:10670585 NCBI chr2A:25,161,668...25,165,600
Ensembl chr2A:25,258,768...25,262,706
JBrowse link
positive regulation of neutrophil mediated killing of gram-negative bacterium term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G F2RL1 F2R like trypsin receptor 1 ISO (PMID:21501162) UniProtKB PMID:21501162 NCBI chr 5:38,462,521...38,478,882
Ensembl chr 5:39,006,331...39,024,265
JBrowse link
programmed cell death induced by symbiont term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G JAK2 Janus kinase 2 ISO (MGI:5009182|PMID:12426001) MGI PMID:12426001 MGI:5009182 NCBI chr 9:4,820,303...4,971,867
Ensembl chr 9:5,006,271...5,156,626
JBrowse link
regulation of neutrophil mediated killing of gram-negative bacterium term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CXCL6 C-X-C motif chemokine ligand 6 ISO (MGI:4819434|PMID:20643340) MGI PMID:20643340 MGI:4819434 NCBI chr 4:50,357,643...50,359,822
Ensembl chr 4:56,189,961...56,192,402
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12566
    biological process involved in interspecies interaction between organisms 1387
      biological process involved in symbiotic interaction 354
        biological process involved in interaction with symbiont 97
          acquisition of nutrients from symbiont + 0
          detection of symbiont + 0
          killing by host of symbiont cells + 27
          lectin-induced modified bacterial internalization 0
          modulation by host of symbiont process + 63
          programmed cell death induced by symbiont + 1
          translocation of molecules into symbiont + 0
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.