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ONTOLOGY REPORT - ANNOTATIONS


Term:biological process involved in interaction with symbiont
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Accession:GO:0051702 term browser browse the term
Definition:An interaction between two organisms living together in more or less intimate association. The term symbiont is used for the smaller (macro) of the two members of a symbiosis; the various forms of symbiosis include parasitism, commensalism and mutualism.
Synonyms:related_synonym: interaction with symbiont


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biological process involved in interaction with symbiont term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DDB1 damage specific DNA binding protein 1 IEA Ensembl GO_REF:0000107 NCBI chr18:55,064,720...55,097,623
Ensembl chr18:55,064,729...55,097,627
JBrowse link
G FN1 fibronectin 1 IEA Ensembl GO_REF:0000107 NCBI chr37:22,456,854...22,522,410
Ensembl chr37:22,420,428...22,523,123
JBrowse link
G GPX1 glutathione peroxidase 1 IEA Ensembl GO_REF:0000107 NCBI chr20:39,889,165...39,890,253
Ensembl chr20:39,889,174...39,890,260
JBrowse link
G GPX2 glutathione peroxidase 2 ISO (MGI:3608474|PMID:12751789) MGI PMID:12751789 MGI:3608474 NCBI chr 8:39,322,040...39,325,833
Ensembl chr 8:39,322,034...39,325,817
JBrowse link
G HSPD1 heat shock protein family D (Hsp60) member 1 IEA Ensembl GO_REF:0000107 NCBI chr37:7,010,421...7,025,912 JBrowse link
G PLG plasminogen IEA Ensembl GO_REF:0000107 NCBI chr 1:49,497,229...49,535,260
Ensembl chr 1:49,497,229...49,535,260
JBrowse link
catabolism by host of symbiont cell wall chitin term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHIA chitinase acidic ISO (MGI:1931335|PMID:11085997) UniProt PMID:11085997 MGI:1931335 NCBI chr 6:40,754,906...40,766,779
Ensembl chr 6:40,754,993...40,766,891
JBrowse link
catabolism by host of symbiont protein term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANXA2 annexin A2 IEA Ensembl GO_REF:0000107 NCBI chr30:25,176,845...25,210,244
Ensembl chr30:25,115,842...25,218,281
JBrowse link
cytolysis by host of symbiont cells term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAMP cathelicidin antimicrobial peptide ISO (PMID:20421939) UniProt PMID:20421939 NCBI chr20:40,790,823...40,792,781
Ensembl chr20:40,790,811...40,792,794
JBrowse link
G CFHR5 complement factor H related 5 IEA Ensembl GO_REF:0000107 NCBI chr 7:5,723,819...5,752,881
Ensembl chr 7:5,724,129...5,752,816
JBrowse link
G F2 coagulation factor II, thrombin IEA Ensembl GO_REF:0000107 NCBI chr18:42,782,744...42,799,531
Ensembl chr18:42,782,751...42,799,459
JBrowse link
G HRG histidine rich glycoprotein ISO (PMID:18797515) UniProt PMID:18797515 NCBI chr34:19,276,487...19,286,540
Ensembl chr34:19,276,549...19,286,537
JBrowse link
G KRT6A keratin 6A ISO (PMID:23006328) UniProt PMID:23006328 NCBI chr27:2,609,414...2,623,810 JBrowse link
G REG3A regenerating islet-derived 3 alpha ISO (PMID:16931762)
(MGI:5897756|PMID:16931762)
UniProt PMID:16931762 MGI:5897756 NCBI chr17:44,859,106...44,864,793
Ensembl chr17:44,859,137...44,861,899
JBrowse link
G ROMO1 reactive oxygen species modulator 1 IEA Ensembl GO_REF:0000107 NCBI chr24:24,614,920...24,616,586
Ensembl chr24:24,615,197...24,616,582
Ensembl chr25:24,615,197...24,616,582
JBrowse link
G SPAG11B sperm associated antigen 11B ISO (PMID:16411022) UniProt PMID:16411022 NCBI chr16:59,006,365...59,011,878
Ensembl chr16:59,006,110...59,012,037
JBrowse link
host-mediated regulation of intestinal microbiota composition term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LRRC19 leucine rich repeat containing 19 IEA Ensembl GO_REF:0000107 NCBI chr11:45,181,709...45,188,106
Ensembl chr11:45,181,602...45,186,893
JBrowse link
G NAPEPLD N-acyl phosphatidylethanolamine phospholipase D IEA Ensembl GO_REF:0000107 NCBI chr18:16,945,096...16,990,752
Ensembl chr18:16,945,253...17,009,607
JBrowse link
killing by host of symbiont cells term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAMP cathelicidin antimicrobial peptide IEA Ensembl GO_REF:0000107 NCBI chr20:40,790,823...40,792,781
Ensembl chr20:40,790,811...40,792,794
JBrowse link
G CBD103 beta-defensin 103 ISO (PMID:16436752) CACAO PMID:16436752 NCBI chr16:58,965,216...58,966,773
Ensembl chr16:58,965,216...58,967,712
JBrowse link
G GAPDH glyceraldehyde-3-phosphate dehydrogenase ISO (PMID:22832495) UniProtKB PMID:22832495 NCBI chr27:38,468,889...38,472,653
Ensembl chr27:38,468,889...38,472,385
JBrowse link
G MBL2 mannose binding lectin 2 IEA Ensembl GO_REF:0000107 NCBI chr 4:29,419,886...29,424,377 JBrowse link
maintenance of symbiont-containing vacuole by host term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AQP1 aquaporin 1 (Colton blood group) ISS
IEA
UniProtKB
Ensembl
GO_REF:0000024, GO_REF:0000107 NCBI chr14:43,592,266...43,603,903
Ensembl chr14:43,578,721...43,605,720
JBrowse link
modulation by host of RNA binding by virus term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUCKS1 nuclear casein kinase and cyclin dependent kinase substrate 1 IEA Ensembl GO_REF:0000107 NCBI chr38:2,157,109...2,188,543
Ensembl chr38:2,160,233...2,170,560
JBrowse link
modulation by host of viral process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HSPA8 heat shock protein family A (Hsp70) member 8 ISO (MGI:5787727|PMID:26581985) AgBase PMID:26581985 MGI:5787727 NCBI chr 5:11,292,219...11,296,851
Ensembl chr 5:11,292,262...11,296,797
JBrowse link
modulation by host of viral RNA genome replication term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FBXL2 F-box and leucine rich repeat protein 2 IEA Ensembl GO_REF:0000107 NCBI chr23:3,498,253...3,606,016
Ensembl chr23:3,498,979...3,607,093
JBrowse link
G FMR1 FMRP translational regulator 1 IEA Ensembl GO_REF:0000107 NCBI chr  X:116,249,079...116,287,008
Ensembl chr  X:116,249,142...116,321,439
JBrowse link
G PHB prohibitin IEA Ensembl GO_REF:0000107 NCBI chr 9:25,525,711...25,536,722
Ensembl chr 9:25,526,649...25,536,722
JBrowse link
G VAPB VAMP associated protein B and C ISO (PMID:19515777) AgBase PMID:19515777 NCBI chr24:43,182,158...43,238,019
Ensembl chr24:43,182,196...43,231,336
JBrowse link
modulation by host of viral RNA-binding transcription factor activity term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUCKS1 nuclear casein kinase and cyclin dependent kinase substrate 1 IEA Ensembl GO_REF:0000107 NCBI chr38:2,157,109...2,188,543
Ensembl chr38:2,160,233...2,170,560
JBrowse link
modulation by host of viral transcription term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PSMC3 proteasome 26S subunit, ATPase 3 ISO (PMID:2194290), (PMID:8419915) GO_Central PMID:2194290, PMID:8419915 NCBI chr18:42,212,083...42,218,958 JBrowse link
negative regulation by host of symbiont molecular function term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANXA2 annexin A2 IEA Ensembl GO_REF:0000107 NCBI chr30:25,176,845...25,210,244
Ensembl chr30:25,115,842...25,218,281
JBrowse link
G RAB9A RAB9A, member RAS oncogene family IEA Ensembl GO_REF:0000107 NCBI chr  X:10,072,764...10,124,620
Ensembl chr  X:10,102,387...10,124,620
JBrowse link
G SFTPD surfactant protein D IEA Ensembl GO_REF:0000107 NCBI chr 4:29,394,755...29,407,499
Ensembl chr 4:29,394,678...29,407,293
JBrowse link
negative regulation by host of viral exo-alpha-sialidase activity term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PTX3 pentraxin 3 IEA Ensembl GO_REF:0000107 NCBI chr23:50,952,835...50,958,607
Ensembl chr23:50,952,885...50,958,167
JBrowse link
negative regulation by host of viral genome replication term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCL8 C-C motif chemokine ligand 8 IEA Ensembl GO_REF:0000107 NCBI chr 9:38,949,184...38,950,702
Ensembl chr 9:38,948,184...38,950,803
JBrowse link
G CCNK cyclin K IEA Ensembl GO_REF:0000107 NCBI chr 8:67,910,772...67,927,216
Ensembl chr 8:67,901,426...67,945,214
JBrowse link
G CEACAM1 CEA cell adhesion molecule 1 ISO (MGI:55926|PMID:6327825) MGI PMID:6327825 MGI:55926 NCBI chr 1:111,902,429...111,919,191
Ensembl chr 1:111,745,413...111,917,830
JBrowse link
G DDX3X DEAD-box helicase 3 X-linked ISO (PMID:24380861) AgBase PMID:24380861 NCBI chr  X:35,759,367...35,789,759
Ensembl chr  X:35,759,416...35,789,774
JBrowse link
G EIF2AK4 eukaryotic translation initiation factor 2 alpha kinase 4 ISO (MGI:5700304|PMID:16601681) UniProt PMID:16601681 MGI:5700304 NCBI chr30:7,144,727...7,248,014
Ensembl chr30:7,144,570...7,248,000
JBrowse link
G PRKN parkin RBR E3 ubiquitin protein ligase IEA Ensembl GO_REF:0000107 NCBI chr 1:49,886,887...51,201,930
Ensembl chr 1:49,889,005...51,201,764
JBrowse link
G VAPA VAMP associated protein A IEA Ensembl GO_REF:0000107 NCBI chr 7:75,844,927...75,891,811
Ensembl chr 7:75,845,000...75,889,076
JBrowse link
G VAPB VAMP associated protein B and C ISO (PMID:19515777) AgBase PMID:19515777 NCBI chr24:43,182,158...43,238,019
Ensembl chr24:43,182,196...43,231,336
JBrowse link
G ZBED1 zinc finger BED-type containing 1 IEA Ensembl GO_REF:0000107 NCBI chr  X:1,299,710...1,303,155
Ensembl chr  X:1,300,940...1,303,033
JBrowse link
G ZC3H12A zinc finger CCCH-type containing 12A IEA Ensembl GO_REF:0000107 NCBI chr15:4,972,369...4,984,218
Ensembl chr15:4,972,956...4,980,371
JBrowse link
negative regulation by host of viral glycoprotein metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PTX3 pentraxin 3 IEA Ensembl GO_REF:0000107 NCBI chr23:50,952,835...50,958,607
Ensembl chr23:50,952,885...50,958,167
JBrowse link
negative regulation by host of viral process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CEACAM1 CEA cell adhesion molecule 1 ISO (MGI:3848729|PMID:19358828)
(MGI:1098064|PMID:9343248)
(MGI:2148352|PMID:11483763)
MGI PMID:9343248, PMID:11483763, PMID:19358828 MGI:1098064, MGI:2148352, MGI:3848729 NCBI chr 1:111,902,429...111,919,191
Ensembl chr 1:111,745,413...111,917,830
JBrowse link
G CRP C-reactive protein IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr38:22,396,787...22,398,180
Ensembl chr38:22,396,263...22,399,166
JBrowse link
G LTF lactotransferrin IEA Ensembl GO_REF:0000107 NCBI chr20:42,231,994...42,263,202
Ensembl chr20:42,231,994...42,263,202
JBrowse link
G PTX3 pentraxin 3 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr23:50,952,835...50,958,607
Ensembl chr23:50,952,885...50,958,167
JBrowse link
negative regulation by host of viral release from host cell term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G VAPB VAMP associated protein B and C ISO (PMID:19515777) AgBase PMID:19515777 NCBI chr24:43,182,158...43,238,019
Ensembl chr24:43,182,196...43,231,336
JBrowse link
negative regulation by host of viral transcription term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCL3 chemokine (C-C motif) ligand 3 ISS UniProtKB GO_REF:0000024 NCBI chr 9:37,693,711...37,695,137
Ensembl chr 9:37,686,480...37,695,573
JBrowse link
G CCL4 chemokine (C-C motif) ligand 4 ISO (PMID:10841574) UniProtKB PMID:10841574 NCBI chr 9:37,681,342...37,682,691
Ensembl chr 9:37,676,966...37,710,209
JBrowse link
G CCL5 C-C motif chemokine ligand 5 IEA Ensembl GO_REF:0000107 NCBI chr 9:37,817,409...37,823,852
Ensembl chr 9:37,817,305...37,823,852
JBrowse link
G HDAC1 histone deacetylase 1 IEA Ensembl GO_REF:0000107 NCBI chr 2:68,901,339...68,936,473
Ensembl chr 2:68,901,651...68,936,186
JBrowse link
G HMGA2 high mobility group AT-hook 2 ISO (PMID:17005673) UniProtKB PMID:17005673 NCBI chr10:8,348,101...8,491,435 JBrowse link
G HMOX1 heme oxygenase 1 ISO (PMID:25086213) AgBase PMID:25086213 NCBI chr10:28,744,404...28,751,544
Ensembl chr10:28,743,795...28,751,773
JBrowse link
G INPP5K inositol polyphosphate-5-phosphatase K ISS UniProtKB GO_REF:0000024 NCBI chr 9:45,660,445...45,680,407
Ensembl chr 9:45,660,446...45,680,363
JBrowse link
G JUN Jun proto-oncogene, AP-1 transcription factor subunit ISO (PMID:2833704) UniProtKB PMID:2833704 NCBI chr 5:50,966,698...50,968,939 JBrowse link
G POU2F3 POU class 2 homeobox 3 ISO (PMID:14645924) UniProtKB PMID:14645924 NCBI chr 5:13,693,686...13,761,295
Ensembl chr 5:13,688,959...13,761,847
JBrowse link
G REST RE1 silencing transcription factor ISS UniProtKB GO_REF:0000024 NCBI chr13:49,041,082...49,062,596
Ensembl chr13:49,041,047...49,059,388
JBrowse link
G TARDBP TAR DNA binding protein IEA Ensembl GO_REF:0000107 NCBI chr 2:84,987,752...84,998,136
Ensembl chr 2:84,989,952...84,998,593
JBrowse link
G TFAP4 transcription factor AP-4 IEA Ensembl GO_REF:0000107 NCBI chr 6:37,075,462...37,111,039
Ensembl chr 6:37,097,786...37,111,072
JBrowse link
G ZNF639 zinc finger protein 639 IEA Ensembl GO_REF:0000107 NCBI chr34:12,767,067...12,775,995
Ensembl chr34:12,766,681...12,775,792
JBrowse link
neutrophil-mediated killing of fungus term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ELANE elastase, neutrophil expressed IEA Ensembl GO_REF:0000107 NCBI chr20:57,789,044...57,790,932
Ensembl chr20:57,788,062...57,790,932
JBrowse link
G NCF1 neutrophil cytosolic factor 1 ISO (MGI:4353632|PMID:11907569) MGI PMID:11907569 MGI:4353632 NCBI chr 6:5,702,222...5,719,515
Ensembl chr 6:5,605,694...5,719,458
JBrowse link
neutrophil-mediated killing of gram-negative bacterium term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ELANE elastase, neutrophil expressed IEA Ensembl GO_REF:0000107 NCBI chr20:57,789,044...57,790,932
Ensembl chr20:57,788,062...57,790,932
JBrowse link
G F2 coagulation factor II, thrombin IEA Ensembl GO_REF:0000107 NCBI chr18:42,782,744...42,799,531
Ensembl chr18:42,782,751...42,799,459
JBrowse link
G TREM1 triggering receptor expressed on myeloid cells 1 ISO (MGI:5471912|PMID:23241959) MGI PMID:23241959 MGI:5471912 NCBI chr12:9,990,678...10,000,195
Ensembl chr12:9,990,679...10,000,236
JBrowse link
G TUSC2 tumor suppressor 2, mitochondrial calcium regulator ISO (MGI:5518492|PMID:24042119) MGI PMID:24042119 MGI:5518492 NCBI chr20:39,024,814...39,026,209 JBrowse link
neutrophil-mediated killing of gram-positive bacterium term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTSG cathepsin G ISO (MGI:4353632|PMID:11907569) MGI PMID:11907569 MGI:4353632 NCBI chr 8:4,483,327...4,485,933
Ensembl chr 8:4,470,577...4,512,628
JBrowse link
G NCF1 neutrophil cytosolic factor 1 ISO (MGI:4353632|PMID:11907569) MGI PMID:11907569 MGI:4353632 NCBI chr 6:5,702,222...5,719,515
Ensembl chr 6:5,605,694...5,719,458
JBrowse link
positive regulation by host of symbiont catalytic activity term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SUGT1 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone IEA Ensembl GO_REF:0000107 NCBI chr22:9,682,026...9,723,412
Ensembl chr22:9,682,169...9,722,979
JBrowse link
positive regulation by host of viral genome replication term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HSPA8 heat shock protein family A (Hsp70) member 8 IEA Ensembl GO_REF:0000107 NCBI chr 5:11,292,219...11,296,851
Ensembl chr 5:11,292,262...11,296,797
JBrowse link
G NUCKS1 nuclear casein kinase and cyclin dependent kinase substrate 1 IEA Ensembl GO_REF:0000107 NCBI chr38:2,157,109...2,188,543
Ensembl chr38:2,160,233...2,170,560
JBrowse link
G PPIB peptidylprolyl isomerase B ISO (PMID:15989969) AgBase PMID:15989969 NCBI chr30:28,654,193...28,660,129
Ensembl chr30:28,654,200...28,788,801
JBrowse link
G STOM stomatin IEA Ensembl GO_REF:0000107 NCBI chr11:74,270,409...74,284,277
Ensembl chr11:74,270,409...74,284,670
JBrowse link
G TBC1D20 TBC1 domain family member 20 IEA Ensembl GO_REF:0000107 NCBI chr24:20,400,647...20,419,652
Ensembl chr24:20,400,791...20,419,655
JBrowse link
G VAPA VAMP associated protein A IEA Ensembl GO_REF:0000107 NCBI chr 7:75,844,927...75,891,811
Ensembl chr 7:75,845,000...75,889,076
JBrowse link
G VAPB VAMP associated protein B and C ISO (PMID:19515777) AgBase PMID:19515777 NCBI chr24:43,182,158...43,238,019
Ensembl chr24:43,182,196...43,231,336
JBrowse link
G YTHDC2 YTH domain containing 2 IEA Ensembl GO_REF:0000107 NCBI chr11:3,537,571...3,613,455
Ensembl chr11:3,536,854...3,612,282
JBrowse link
positive regulation by host of viral process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANXA2 annexin A2 ISO (PMID:25593157) AgBase PMID:25593157 NCBI chr30:25,176,845...25,210,244
Ensembl chr30:25,115,842...25,218,281
JBrowse link
G APOE apolipoprotein E IEA Ensembl GO_REF:0000107 NCBI chr 1:110,525,717...110,528,534
Ensembl chr 1:110,525,722...110,528,440
JBrowse link
G CAV2 caveolin 2 ISO (PMID:25556234) AgBase PMID:25556234 NCBI chr14:55,437,622...55,445,481
Ensembl chr14:55,437,622...55,445,469
JBrowse link
G CEACAM1 CEA cell adhesion molecule 1 ISO (MGI:2148352|PMID:11483763)
(MGI:1098064|PMID:9343248)
MGI PMID:9343248, PMID:11483763 MGI:1098064, MGI:2148352 NCBI chr 1:111,902,429...111,919,191
Ensembl chr 1:111,745,413...111,917,830
JBrowse link
G CFL1 cofilin 1 ISO (PMID:25556234) AgBase PMID:25556234 NCBI chr18:51,404,649...51,408,240
Ensembl chr18:51,401,659...51,408,212
JBrowse link
G CSF1R colony stimulating factor 1 receptor IEA Ensembl GO_REF:0000107 NCBI chr 4:58,980,699...59,010,683
Ensembl chr 4:58,980,788...59,010,510
JBrowse link
G IFNG interferon gamma ISO (MGI:4840165|PMID:20889566) ARUK-UCL PMID:20889566 MGI:4840165 NCBI chr10:10,406,866...10,411,698
Ensembl chr10:10,406,867...10,411,698
JBrowse link
G IGF2R insulin like growth factor 2 receptor IEA Ensembl GO_REF:0000107 NCBI chr 1:49,161,551...49,262,260
Ensembl chr 1:49,161,444...49,262,277
JBrowse link
G LOC100688922 uncharacterized LOC100688922 ISO (PMID:25556234) AgBase PMID:25556234 NCBI chr20:43,542,093...43,553,933 JBrowse link
G PC pyruvate carboxylase ISO (PMID:23861867) AgBase PMID:23861867 NCBI chr18:50,406,994...50,507,677
Ensembl chr18:50,412,272...50,507,669
JBrowse link
G PPIB peptidylprolyl isomerase B ISO (PMID:15989969) AgBase PMID:15989969 NCBI chr30:28,654,193...28,660,129
Ensembl chr30:28,654,200...28,788,801
JBrowse link
positive regulation by host of viral release from host cell term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAV2 caveolin 2 IEA Ensembl GO_REF:0000107 NCBI chr14:55,437,622...55,445,481
Ensembl chr14:55,437,622...55,445,469
JBrowse link
G LOC100688922 uncharacterized LOC100688922 ISO (PMID:25556234) AgBase PMID:25556234 NCBI chr20:43,542,093...43,553,933 JBrowse link
G PC pyruvate carboxylase IEA Ensembl GO_REF:0000107 NCBI chr18:50,406,994...50,507,677
Ensembl chr18:50,412,272...50,507,669
JBrowse link
G VAPA VAMP associated protein A IEA Ensembl GO_REF:0000107 NCBI chr 7:75,844,927...75,891,811
Ensembl chr 7:75,845,000...75,889,076
JBrowse link
G VAPB VAMP associated protein B and C ISO (PMID:19515777) AgBase PMID:19515777 NCBI chr24:43,182,158...43,238,019
Ensembl chr24:43,182,196...43,231,336
JBrowse link
G ZNF502 zinc finger protein 502 IEA Ensembl GO_REF:0000107 NCBI chr20:43,541,257...43,556,656
Ensembl chr20:43,553,434...43,568,524
JBrowse link
positive regulation by host of viral transcription term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHD1 chromodomain helicase DNA binding protein 1 IEA Ensembl GO_REF:0000107 NCBI chr 3:11,288,873...11,359,972
Ensembl chr 3:11,288,244...11,359,208
JBrowse link
G CTDP1 CTD phosphatase subunit 1 IEA Ensembl GO_REF:0000107 NCBI chr 1:886,973...945,994
Ensembl chr 1:762,020...946,142
JBrowse link
G EP300 E1A binding protein p300 IEA Ensembl GO_REF:0000107 NCBI chr10:24,076,538...24,156,708
Ensembl chr10:24,077,971...24,156,396
JBrowse link
G FKBP8 FKBP prolyl isomerase 8 ISO (PMID:26748656) AgBase PMID:26748656 NCBI chr20:44,494,856...44,504,084
Ensembl chr20:44,489,219...44,598,497
JBrowse link
G GTF2B general transcription factor IIB IEA Ensembl GO_REF:0000107 NCBI chr 6:59,491,986...59,527,142
Ensembl chr 6:59,492,055...59,527,054
JBrowse link
G HPN hepsin ISS
IEA
UniProtKB
Ensembl
GO_REF:0000024, GO_REF:0000107 NCBI chr 1:117,486,308...117,503,127
Ensembl chr 1:117,486,340...117,502,583
JBrowse link
G JUN Jun proto-oncogene, AP-1 transcription factor subunit ISO (PMID:2833704) UniProtKB PMID:2833704 NCBI chr 5:50,966,698...50,968,939 JBrowse link
G LEF1 lymphoid enhancer binding factor 1 IEA Ensembl GO_REF:0000107 NCBI chr32:28,516,002...28,633,759
Ensembl chr32:28,517,108...28,634,019
JBrowse link
G NUCKS1 nuclear casein kinase and cyclin dependent kinase substrate 1 IEA Ensembl GO_REF:0000107 NCBI chr38:2,157,109...2,188,543
Ensembl chr38:2,160,233...2,170,560
JBrowse link
G RRP1B ribosomal RNA processing 1B IEA Ensembl GO_REF:0000107 NCBI chr31:37,652,584...37,670,396
Ensembl chr31:37,652,863...37,667,895
JBrowse link
G SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 IEA Ensembl GO_REF:0000107 NCBI chr20:50,175,489...50,268,865
Ensembl chr20:50,175,687...50,268,836
JBrowse link
G SMARCB1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 ISO (PMID:16687403) BHF-UCL PMID:16687403 NCBI chr26:28,692,610...28,728,778
Ensembl chr26:28,692,899...28,728,783
JBrowse link
G SNW1 SNW domain containing 1 ISO (PMID:15905409)
(PMID:19818711)
UniProtKB PMID:15905409, PMID:19818711 NCBI chr 8:50,478,924...50,512,360
Ensembl chr 8:50,479,338...50,512,243
JBrowse link
G SP1 Sp1 transcription factor IEA Ensembl GO_REF:0000107 NCBI chr27:1,802,587...1,861,187
Ensembl chr27:1,805,184...1,847,226
JBrowse link
G TAF11 TATA-box binding protein associated factor 11 IEA Ensembl GO_REF:0000107 NCBI chr12:4,088,203...4,095,300
Ensembl chr12:4,088,680...4,094,125
JBrowse link
G TFAP4 transcription factor AP-4 IEA Ensembl GO_REF:0000107 NCBI chr 6:37,075,462...37,111,039
Ensembl chr 6:37,097,786...37,111,072
JBrowse link
G ZNF639 zinc finger protein 639 IEA Ensembl GO_REF:0000107 NCBI chr34:12,767,067...12,775,995
Ensembl chr34:12,766,681...12,775,792
JBrowse link
positive regulation of neutrophil mediated killing of fungus term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARG1 arginase 1 IEA Ensembl GO_REF:0000107 NCBI chr12:242,717...255,736
Ensembl chr12:242,714...255,305
JBrowse link
G POMC proopiomelanocortin ISO (PMID:10670585) UniProt PMID:10670585 NCBI chr17:19,431,396...19,438,247
Ensembl chr17:19,431,585...19,434,440
JBrowse link
positive regulation of neutrophil mediated killing of gram-negative bacterium term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G F2RL1 F2R like trypsin receptor 1 IEA Ensembl GO_REF:0000107 NCBI chr 3:29,801,119...29,810,006
Ensembl chr 3:29,800,211...29,810,180
JBrowse link
programmed cell death induced by symbiont term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G JAK2 Janus kinase 2 ISO (MGI:5009182|PMID:12426001) MGI PMID:12426001 MGI:5009182 NCBI chr 1:93,321,055...93,438,898
Ensembl chr 1:93,142,635...93,435,997
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16190
    biological process involved in interspecies interaction between organisms 1586
      biological process involved in symbiotic interaction 364
        biological process involved in interaction with symbiont 92
          acquisition of nutrients from symbiont + 0
          detection of symbiont + 0
          killing by host of symbiont cells + 19
          lectin-induced modified bacterial internalization 0
          modulation by host of symbiont process + 66
          programmed cell death induced by symbiont + 1
          translocation of molecules into symbiont + 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.