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ONTOLOGY REPORT - ANNOTATIONS


Term:short-chain fatty acid biosynthetic process
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Accession:GO:0051790 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of fatty acids with a chain length of less than C6.
Synonyms:exact_synonym: short chain fatty acid biosynthesis;   short-chain fatty acid anabolism;   short-chain fatty acid formation;   short-chain fatty acid synthesis


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short-chain fatty acid biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Oxsm 3-oxoacyl-ACP synthase, mitochondrial ISO (PMID:15668256) RGD PMID:15668256 NCBI chr15:10,462,380...10,466,496
Ensembl chr15:10,462,106...10,466,496
JBrowse link
2-oxobutyrate biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Thnsl2 threonine synthase-like 2 ISO
IBA
(MGI:MGI:3690523|PMID:17034760)
PMID:21873635
RGD PMID:17034760, PMID:21873635 MGI:MGI:3690523, RGD:13792537 NCBI chr 4:98,976,559...98,997,187
Ensembl chr 4:98,976,550...98,995,590
JBrowse link
propionate biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acss1 acyl-CoA synthetase short-chain family member 1 IDA RGD PMID:4334748 RGD:2317572 NCBI chr 3:146,420,346...146,470,293
Ensembl chr 3:146,420,346...146,470,293
JBrowse link
G Acss2 acyl-CoA synthetase short-chain family member 2 IDA RGD PMID:4334748 RGD:2317572 NCBI chr 3:151,032,925...151,075,856
Ensembl chr 3:151,032,952...151,075,856
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20028
    metabolic process 12271
      biosynthetic process 6222
        organic substance biosynthetic process 6117
          lipid biosynthetic process 618
            fatty acid biosynthetic process 156
              short-chain fatty acid biosynthetic process 4
                2-oxobutyrate biosynthetic process 1
                acetoacetic acid biosynthetic process 0
                butyrate biosynthetic process + 0
                propionate biosynthetic process 2
Path 2
Term Annotations click to browse term
  biological_process 20028
    metabolic process 12271
      small molecule metabolic process 1874
        organic acid metabolic process 1095
          oxoacid metabolic process 1066
            carboxylic acid metabolic process 1009
              monocarboxylic acid metabolic process 668
                fatty acid metabolic process 425
                  fatty acid biosynthetic process 156
                    short-chain fatty acid biosynthetic process 4
                      2-oxobutyrate biosynthetic process 1
                      acetoacetic acid biosynthetic process 0
                      butyrate biosynthetic process + 0
                      propionate biosynthetic process 2
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.