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ONTOLOGY REPORT - ANNOTATIONS


Term:modulation by host of symbiont process
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Accession:GO:0051851 term browser browse the term
Definition:The process in which an organism effects a change in the structure or processes of a symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
Synonyms:related_synonym: modification by host of symbiont morphology or physiology


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catabolism by host of symbiont cell wall chitin term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHIA chitinase acidic ISO (MGI:1931335|PMID:11085997) UniProt PMID:11085997 MGI:1931335 NCBI chr 1:113,935,888...113,965,541
Ensembl chr 1:126,381,724...126,391,909
JBrowse link
catabolism by host of symbiont protein term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANXA2 annexin A2 ISO (PMID:26812398) AgBase PMID:26812398 NCBI chr15:39,322,303...39,371,565
Ensembl chr15:57,625,425...57,674,250
JBrowse link
host-mediated regulation of intestinal microbiota composition term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LRRC19 leucine rich repeat containing 19 ISO (MGI:6204559|PMID:26776522) UniProt PMID:26776522 MGI:6204559 NCBI chr 9:26,839,225...26,845,937
Ensembl chr 9:27,445,701...27,458,085
JBrowse link
G NAPEPLD N-acyl phosphatidylethanolamine phospholipase D ISO (MGI:5641800|PMID:25757720) UniProt PMID:25757720 MGI:5641800 NCBI chr 7:95,074,084...95,123,936
Ensembl chr 7:107,923,960...107,973,269
JBrowse link
maintenance of symbiont-containing vacuole by host term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AQP1 aquaporin 1 (Colton blood group) ISO (PMID:18665841)
(MGI:4457239|PMID:18665841)
UniProtKB
UniProt
PMID:18665841 MGI:4457239 NCBI chr 7:31,524,933...31,538,602 JBrowse link
modulation by host of RNA binding by virus term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUCKS1 nuclear casein kinase and cyclin dependent kinase substrate 1 ISO (PMID:25116364) ParkinsonsUK-UCL PMID:25116364 NCBI chr 1:181,322,760...181,359,321
Ensembl chr 1:185,606,796...185,642,984
JBrowse link
modulation by host of viral genome replication term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IFI27 interferon alpha inducible protein 27 ISO (PMID:27777077) UniProt PMID:27777077 NCBI chr14:74,742,775...74,748,820
Ensembl chr14:94,046,694...94,082,022
JBrowse link
modulation by host of viral process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HSPA8 heat shock protein family A (Hsp70) member 8 ISO (MGI:5787727|PMID:26581985) AgBase PMID:26581985 MGI:5787727 NCBI chr11:117,890,545...117,895,262
Ensembl chr11:121,809,800...121,815,773
JBrowse link
modulation by host of viral RNA genome replication term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FBXL2 F-box and leucine rich repeat protein 2 ISO (PMID:15893726) UniProtKB PMID:15893726 NCBI chr 3:33,199,436...33,308,831
Ensembl chr 3:33,501,525...33,610,039
JBrowse link
G FMR1 FMRP translational regulator 1 ISO (PMID:24514761) UniProtKB PMID:24514761 NCBI chr  X:136,937,889...136,976,828
Ensembl chr  X:147,365,748...147,405,321
JBrowse link
G PHB prohibitin ISO (MGI:6436975|PMID:29324904) UniProt PMID:29324904 MGI:6436975 NCBI chr17:8,189,555...8,200,491
Ensembl chr17:8,175,968...8,186,790
JBrowse link
G VAPB VAMP associated protein B and C ISO (PMID:19515777) AgBase PMID:19515777 NCBI chr20:54,736,035...54,798,155
Ensembl chr20:56,010,782...56,064,363
JBrowse link
modulation by host of viral RNA-binding transcription factor activity term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUCKS1 nuclear casein kinase and cyclin dependent kinase substrate 1 ISO (PMID:25116364) ParkinsonsUK-UCL PMID:25116364 NCBI chr 1:181,322,760...181,359,321
Ensembl chr 1:185,606,796...185,642,984
JBrowse link
modulation by host of viral transcription term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PSMC3 proteasome 26S subunit, ATPase 3 ISO (PMID:2194290), (PMID:8419915) GO_Central PMID:2194290, PMID:8419915 NCBI chr11:47,366,986...47,374,677
Ensembl chr11:47,920,295...47,927,654
JBrowse link
negative regulation by host of symbiont molecular function term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANXA2 annexin A2 ISO (PMID:26812398) AgBase PMID:26812398 NCBI chr15:39,322,303...39,371,565
Ensembl chr15:57,625,425...57,674,250
JBrowse link
G RAB9A RAB9A, member RAS oncogene family ISO (PMID:18787122) AgBase PMID:18787122 NCBI chr  X:6,296,483...6,317,826
Ensembl chr  X:13,604,454...13,605,059
JBrowse link
G SFTPD surfactant protein D ISO (PMID:28228557) AgBase PMID:28228557 NCBI chr10:76,275,147...76,318,952
Ensembl chr10:78,965,252...78,974,181
JBrowse link
negative regulation by host of viral exo-alpha-sialidase activity term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APCS amyloid P component, serum ISO (PMID:23544079) BHF-UCL PMID:23544079 NCBI chr 1:134,937,472...134,938,512
Ensembl chr 1:138,734,046...138,735,093
JBrowse link
G PTX3 pentraxin 3 ISO (PMID:23544079) BHF-UCL PMID:23544079 NCBI chr 3:154,485,470...154,492,293
Ensembl chr 3:162,537,577...162,543,652
JBrowse link
negative regulation by host of viral genome replication term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCL8 C-C motif chemokine ligand 8 ISO (PMID:20181935) ARUK-UCL PMID:20181935 NCBI chr17:22,468,080...22,470,443
Ensembl chr17:22,761,064...22,763,933
JBrowse link
G CCNK cyclin K ISO (PMID:21555514) CACAO PMID:21555514 NCBI chr14:80,105,372...80,136,511
Ensembl chr14:99,438,814...99,480,842
JBrowse link
G CEACAM1 CEA cell adhesion molecule 1 ISO (MGI:55926|PMID:6327825) MGI PMID:6327825 MGI:55926 NCBI chr19:39,395,550...39,417,063 JBrowse link
G DDX3X DEAD-box helicase 3 X-linked ISO (PMID:24380861) AgBase PMID:24380861 NCBI chr  X:33,780,381...33,796,829
Ensembl chr  X:41,475,116...41,505,837
JBrowse link
G EIF2AK4 eukaryotic translation initiation factor 2 alpha kinase 4 ISO (MGI:5700304|PMID:16601681) UniProt PMID:16601681 MGI:5700304 NCBI chr15:18,871,867...18,973,380
Ensembl chr15:37,120,044...37,229,211
JBrowse link
G PRKN parkin RBR E3 ubiquitin protein ligase ISO (PMID:25244949) AgBase PMID:25244949 NCBI chr 6:159,293,016...160,679,106
Ensembl chr 6:164,314,990...165,678,770
JBrowse link
G VAPA VAMP associated protein A ISO (PMID:19515777) AgBase PMID:19515777 NCBI chr18:4,329,479...4,373,047
Ensembl chr18:6,612,105...6,637,829
JBrowse link
G VAPB VAMP associated protein B and C ISO (PMID:19515777) AgBase PMID:19515777 NCBI chr20:54,736,035...54,798,155
Ensembl chr20:56,010,782...56,064,363
JBrowse link
G ZBED1 zinc finger BED-type containing 1 ISO (PMID:25210186) UniProt PMID:25210186 Ensembl chr  X:2,441,985...2,444,069 JBrowse link
G ZC3H12A zinc finger CCCH-type containing 12A ISO (PMID:23355615) UniProtKB PMID:23355615 NCBI chr 1:36,743,341...36,753,261
Ensembl chr 1:38,093,917...38,103,556
JBrowse link
negative regulation by host of viral glycoprotein metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APCS amyloid P component, serum ISO (PMID:23544079) BHF-UCL PMID:23544079 NCBI chr 1:134,937,472...134,938,512
Ensembl chr 1:138,734,046...138,735,093
JBrowse link
G PTX3 pentraxin 3 ISO (PMID:23544079) BHF-UCL PMID:23544079 NCBI chr 3:154,485,470...154,492,293
Ensembl chr 3:162,537,577...162,543,652
JBrowse link
negative regulation by host of viral process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CEACAM1 CEA cell adhesion molecule 1 ISO (MGI:3848729|PMID:19358828)
(MGI:1098064|PMID:9343248)
(MGI:2148352|PMID:11483763)
MGI PMID:9343248, PMID:11483763, PMID:19358828 MGI:1098064, MGI:2148352, MGI:3848729 NCBI chr19:39,395,550...39,417,063 JBrowse link
G LTF lactotransferrin ISO (PMID:12522210) AgBase PMID:12522210 NCBI chr 3:46,337,738...46,367,476
Ensembl chr 3:47,442,440...47,471,532
JBrowse link
negative regulation by host of viral release from host cell term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G VAPB VAMP associated protein B and C ISO (PMID:19515777) AgBase PMID:19515777 NCBI chr20:54,736,035...54,798,155
Ensembl chr20:56,010,782...56,064,363
JBrowse link
negative regulation by host of viral transcription term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCL5 C-C motif chemokine ligand 5 ISO (PMID:10841574) UniProtKB PMID:10841574 NCBI chr17:20,915,198...20,923,530
Ensembl chr17:21,210,798...21,219,172
JBrowse link
G HDAC1 histone deacetylase 1 ISO (PMID:16540471) UniProtKB PMID:16540471 NCBI chr 1:31,578,373...31,619,970
Ensembl chr 1:32,585,791...32,626,410
JBrowse link
G HMGA2 high mobility group AT-hook 2 ISO (PMID:17005673) UniProtKB PMID:17005673 NCBI chr12:22,954,946...23,096,623 JBrowse link
G HMOX1 heme oxygenase 1 ISO (PMID:25086213) AgBase PMID:25086213 NCBI chr22:16,388,368...16,401,289
Ensembl chr22:34,230,825...34,244,063
JBrowse link
G INPP5K inositol polyphosphate-5-phosphatase K ISO (PMID:18774950) UniProtKB PMID:18774950 NCBI chr17:1,477,511...1,499,765
Ensembl chr17:1,377,312...1,399,373
JBrowse link
G JUN Jun proto-oncogene, AP-1 transcription factor subunit ISO (PMID:2833704) UniProtKB PMID:2833704 NCBI chr 1:58,042,794...58,045,536 JBrowse link
G POU2F3 POU class 2 homeobox 3 ISO (PMID:14645924) UniProtKB PMID:14645924 NCBI chr11:115,075,399...115,156,307
Ensembl chr11:119,001,408...119,082,531
JBrowse link
G REST RE1 silencing transcription factor ISO (PMID:17555596) UniProtKB PMID:17555596 NCBI chr 4:66,984,466...67,012,301
Ensembl chr 4:73,526,085...73,582,242
JBrowse link
G TARDBP TAR DNA binding protein ISO (PMID:7745706) BHF-UCL PMID:7745706 NCBI chr 1:9,775,084...9,786,710
Ensembl chr 1:10,996,006...11,008,732
JBrowse link
G TFAP4 transcription factor AP-4 ISO (PMID:14645924), (PMID:16540471) UniProtKB PMID:14645924, PMID:16540471 NCBI chr16:3,176,129...3,226,404
Ensembl chr16:4,348,929...4,368,525
JBrowse link
G ZNF639 zinc finger protein 639 ISO (PMID:20484494) UniProtKB PMID:20484494 NCBI chr 3:176,353,400...176,366,142
Ensembl chr 3:184,533,061...184,539,270
JBrowse link
positive regulation by host of symbiont catalytic activity term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SUGT1 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone ISO (PMID:23935490) AgBase PMID:23935490 NCBI chr13:33,688,941...33,724,687
Ensembl chr13:52,497,557...52,532,434
JBrowse link
positive regulation by host of viral genome replication term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HSPA8 heat shock protein family A (Hsp70) member 8 ISO (MGI:5787727|PMID:26581985) AgBase PMID:26581985 MGI:5787727 NCBI chr11:117,890,545...117,895,262
Ensembl chr11:121,809,800...121,815,773
JBrowse link
G NUCKS1 nuclear casein kinase and cyclin dependent kinase substrate 1 ISO (PMID:25116364) ParkinsonsUK-UCL PMID:25116364 NCBI chr 1:181,322,760...181,359,321
Ensembl chr 1:185,606,796...185,642,984
JBrowse link
G PPIB peptidylprolyl isomerase B ISO (PMID:15989969) AgBase PMID:15989969 NCBI chr15:43,108,139...43,115,470
Ensembl chr15:61,400,272...61,406,758
JBrowse link
G STOM stomatin ISO (MGI:5616479|PMID:25262680) AgBase PMID:25262680 MGI:5616479 NCBI chr 9:92,466,718...92,498,265
Ensembl chr 9:120,812,065...120,843,497
JBrowse link
G TBC1D20 TBC1 domain family member 20 ISO (PMID:17686842) AgBase PMID:17686842 NCBI chr20:644,646...670,860
Ensembl chr20:414,066...431,032
JBrowse link
G VAPA VAMP associated protein A ISO (PMID:19515777) AgBase PMID:19515777 NCBI chr18:4,329,479...4,373,047
Ensembl chr18:6,612,105...6,637,829
JBrowse link
G VAPB VAMP associated protein B and C ISO (PMID:19515777) AgBase PMID:19515777 NCBI chr20:54,736,035...54,798,155
Ensembl chr20:56,010,782...56,064,363
JBrowse link
G YTHDC2 YTH domain containing 2 ISO (PMID:21559518) AgBase PMID:21559518 NCBI chr 5:108,870,417...108,951,848
Ensembl chr 5:114,672,839...114,754,153
JBrowse link
positive regulation by host of viral process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANXA2 annexin A2 ISO (PMID:25593157) AgBase PMID:25593157 NCBI chr15:39,322,303...39,371,565
Ensembl chr15:57,625,425...57,674,250
JBrowse link
G APOE apolipoprotein E ISO (PMID:25122793) AgBase PMID:25122793 NCBI chr19:41,853,669...41,857,252
Ensembl chr19:50,459,906...50,463,490
JBrowse link
G CAV2 caveolin 2 ISO (PMID:25556234) AgBase PMID:25556234 NCBI chr 7:108,254,074...108,480,716
Ensembl chr 7:121,168,579...121,177,415
JBrowse link
G CEACAM1 CEA cell adhesion molecule 1 ISO (MGI:2148352|PMID:11483763)
(MGI:1098064|PMID:9343248)
MGI PMID:9343248, PMID:11483763 MGI:1098064, MGI:2148352 NCBI chr19:39,395,550...39,417,063 JBrowse link
G CFL1 cofilin 1 ISO (PMID:25556234) AgBase PMID:25556234 NCBI chr11:61,215,092...61,218,628
Ensembl chr11:64,544,275...64,550,806
JBrowse link
G CSF1R colony stimulating factor 1 receptor ISO (MGI:4840165|PMID:20889566) ARUK-UCL PMID:20889566 MGI:4840165 NCBI chr 5:145,478,725...145,537,858
Ensembl chr 5:151,483,572...151,517,415
JBrowse link
G IFNG interferon gamma ISO (MGI:4840165|PMID:20889566) ARUK-UCL PMID:20889566 MGI:4840165 NCBI chr12:65,663,764...65,668,732
Ensembl chr12:68,448,861...68,453,829
JBrowse link
G IGF2R insulin like growth factor 2 receptor ISO (PMID:20889566) ARUK-UCL PMID:20889566 NCBI chr 6:157,852,565...157,990,049
Ensembl chr 6:162,878,661...162,997,762
JBrowse link
G PC pyruvate carboxylase ISO (PMID:23861867) AgBase PMID:23861867 NCBI chr11:62,205,644...62,317,917
Ensembl chr11:65,527,662...65,551,396
JBrowse link
G PPIB peptidylprolyl isomerase B ISO (PMID:15989969) AgBase PMID:15989969 NCBI chr15:43,108,139...43,115,470
Ensembl chr15:61,400,272...61,406,758
JBrowse link
G ZNF502 zinc finger protein 502 ISO (PMID:25556234) AgBase PMID:25556234 NCBI chr 3:44,607,484...44,618,977
Ensembl chr 3:45,665,147...45,676,361
JBrowse link
positive regulation by host of viral release from host cell term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAV2 caveolin 2 ISO (PMID:25556234) AgBase PMID:25556234 NCBI chr 7:108,254,074...108,480,716
Ensembl chr 7:121,168,579...121,177,415
JBrowse link
G PC pyruvate carboxylase ISO (PMID:23861867) AgBase PMID:23861867 NCBI chr11:62,205,644...62,317,917
Ensembl chr11:65,527,662...65,551,396
JBrowse link
G VAPA VAMP associated protein A ISO (PMID:19515777) AgBase PMID:19515777 NCBI chr18:4,329,479...4,373,047
Ensembl chr18:6,612,105...6,637,829
JBrowse link
G VAPB VAMP associated protein B and C ISO (PMID:19515777) AgBase PMID:19515777 NCBI chr20:54,736,035...54,798,155
Ensembl chr20:56,010,782...56,064,363
JBrowse link
G ZNF502 zinc finger protein 502 ISO (PMID:25556234) AgBase PMID:25556234 NCBI chr 3:44,607,484...44,618,977
Ensembl chr 3:45,665,147...45,676,361
JBrowse link
positive regulation by host of viral transcription term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHD1 chromodomain helicase DNA binding protein 1 ISO (PMID:25297984) CACAO PMID:25297984 NCBI chr 5:94,165,414...94,238,836
Ensembl chr 5:99,721,032...99,790,263
JBrowse link
G CTDP1 CTD phosphatase subunit 1 ISO (PMID:15723517) CAFA PMID:15723517 NCBI chr18:73,279,510...73,357,718
Ensembl chr18:76,646,641...76,722,573
JBrowse link
G EP300 E1A binding protein p300 ISO (PMID:16687403) BHF-UCL PMID:16687403 NCBI chr22:21,986,467...22,076,921
Ensembl chr22:40,079,503...40,168,604
JBrowse link
G FKBP8 FKBP prolyl isomerase 8 ISO (PMID:26748656) AgBase PMID:26748656 NCBI chr19:18,009,505...18,021,772
Ensembl chr19:18,980,269...18,992,170
JBrowse link
G HPN hepsin ISO (PMID:15614436) UniProtKB PMID:15614436 NCBI chr19:31,985,761...32,012,841
Ensembl chr19:40,725,319...40,750,628
JBrowse link
G JUN Jun proto-oncogene, AP-1 transcription factor subunit ISO (PMID:2833704) UniProtKB PMID:2833704 NCBI chr 1:58,042,794...58,045,536 JBrowse link
G LEF1 lymphoid enhancer binding factor 1 ISO (PMID:7657162) UniProtKB PMID:7657162 NCBI chr 4:100,552,959...100,674,156
Ensembl chr 4:111,125,312...111,245,980
JBrowse link
G NUCKS1 nuclear casein kinase and cyclin dependent kinase substrate 1 ISO (PMID:25116364) ParkinsonsUK-UCL PMID:25116364 NCBI chr 1:181,322,760...181,359,321
Ensembl chr 1:185,606,796...185,642,984
JBrowse link
G RRP1B ribosomal RNA processing 1B ISO (PMID:26311876) UniProtKB PMID:26311876 NCBI chr21:29,916,109...29,952,749
Ensembl chr21:43,217,516...43,251,192
JBrowse link
G SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 ISO (PMID:16687403) BHF-UCL PMID:16687403 NCBI chr19:10,515,216...10,616,155
Ensembl chr19:11,250,006...11,334,952
JBrowse link
G SMARCB1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 ISO (PMID:16687403) BHF-UCL PMID:16687403 NCBI chr22:4,542,764...4,589,461
Ensembl chr22:22,627,982...22,673,921
JBrowse link
G SNW1 SNW domain containing 1 ISO (PMID:19818711)
(PMID:15905409)
UniProtKB PMID:15905409, PMID:19818711 NCBI chr14:58,271,830...58,315,773
Ensembl chr14:77,472,387...77,517,315
JBrowse link
G SP1 Sp1 transcription factor ISO (PMID:2833704) UniProtKB PMID:2833704 NCBI chr12:35,338,492...35,374,462
Ensembl chr12:36,127,681...36,158,356
JBrowse link
G TAF11 TATA-box binding protein associated factor 11 ISO (PMID:9108034) UniProtKB PMID:9108034 NCBI chr 6:34,439,369...34,449,501
Ensembl chr 6:35,536,614...35,546,805
JBrowse link
G TFAP4 transcription factor AP-4 ISO (PMID:2833704) UniProtKB PMID:2833704 NCBI chr16:3,176,129...3,226,404
Ensembl chr16:4,348,929...4,368,525
JBrowse link
G ZNF639 zinc finger protein 639 ISO (PMID:20484494) UniProtKB PMID:20484494 NCBI chr 3:176,353,400...176,366,142
Ensembl chr 3:184,533,061...184,539,270
JBrowse link

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.