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ONTOLOGY REPORT - ANNOTATIONS


Term:modulation by host of symbiont process
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Accession:GO:0051851 term browser browse the term
Definition:The process in which an organism effects a change in the structure or processes of a symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
Synonyms:related_synonym: modification by host of symbiont morphology or physiology


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catabolism by host of symbiont protein term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa2 annexin A2 ISO (PMID:26812398) AgBase PMID:26812398 NCBI chrNW_004955450:14,545,586...14,574,161
Ensembl chrNW_004955450:14,512,381...14,574,696
JBrowse link
host-mediated regulation of intestinal microbiota composition term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrrc19 leucine rich repeat containing 19 ISO (MGI:6204559|PMID:26776522) UniProt PMID:26776522 MGI:6204559 NCBI chrNW_004955472:7,841,459...7,850,906
Ensembl chrNW_004955472:7,841,322...7,852,597
JBrowse link
G Napepld N-acyl phosphatidylethanolamine phospholipase D ISO (MGI:5641800|PMID:25757720) UniProt PMID:25757720 MGI:5641800 NCBI chrNW_004955410:8,217,684...8,233,302
Ensembl chrNW_004955410:8,220,400...8,247,486
JBrowse link
maintenance of symbiont-containing vacuole by host term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp1 aquaporin 1 (Colton blood group) ISO (PMID:18665841)
(MGI:4457239|PMID:18665841)
UniProtKB
UniProt
PMID:18665841 MGI:4457239 NCBI chrNW_004955410:32,066,196...32,078,661 JBrowse link
modulation by host of RNA binding by virus term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nucks1 nuclear casein kinase and cyclin dependent kinase substrate 1 ISO (PMID:25116364) ParkinsonsUK-UCL PMID:25116364 NCBI chrNW_004955406:41,412,855...41,448,551
Ensembl chrNW_004955406:41,417,983...41,449,177
JBrowse link
modulation by host of viral process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hspa8 heat shock protein family A (Hsp70) member 8 ISO (MGI:5787727|PMID:26581985) AgBase PMID:26581985 MGI:5787727 NCBI chrNW_004955412:23,863,513...23,867,984
Ensembl chrNW_004955412:23,862,590...23,867,984
JBrowse link
modulation by host of viral RNA genome replication term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fbxl2 F-box and leucine rich repeat protein 2 ISO (PMID:15893726) UniProtKB PMID:15893726 NCBI chrNW_004955421:512,197...617,524
Ensembl chrNW_004955421:512,158...617,524
JBrowse link
G Fmr1 FMRP translational regulator 1 ISO (PMID:24514761) UniProtKB PMID:24514761 NCBI chrNW_004955498:566,741...594,837
Ensembl chrNW_004955498:566,688...595,360
JBrowse link
G Phb prohibitin ISO (MGI:6436975|PMID:29324904) UniProt PMID:29324904 MGI:6436975 NCBI chrNW_004955451:12,110,290...12,119,870
Ensembl chrNW_004955451:12,110,290...12,120,124
JBrowse link
G Vapb VAMP associated protein B and C ISO (PMID:19515777) AgBase PMID:19515777 NCBI chrNW_004955445:1,098,454...1,122,879
Ensembl chrNW_004955445:1,098,454...1,120,823
JBrowse link
modulation by host of viral RNA-binding transcription factor activity term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nucks1 nuclear casein kinase and cyclin dependent kinase substrate 1 ISO (PMID:25116364) ParkinsonsUK-UCL PMID:25116364 NCBI chrNW_004955406:41,412,855...41,448,551
Ensembl chrNW_004955406:41,417,983...41,449,177
JBrowse link
modulation by host of viral transcription term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Psmc3 proteasome 26S subunit, ATPase 3 ISO (PMID:2194290), (PMID:8419915) GO_Central PMID:2194290, PMID:8419915 NCBI chrNW_004955422:837,934...843,161
Ensembl chrNW_004955422:837,573...845,341
JBrowse link
negative regulation by host of symbiont molecular function term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa2 annexin A2 ISO (PMID:26812398) AgBase PMID:26812398 NCBI chrNW_004955450:14,545,586...14,574,161
Ensembl chrNW_004955450:14,512,381...14,574,696
JBrowse link
G Rab9a RAB9A, member RAS oncogene family ISO (PMID:18787122) AgBase PMID:18787122 NCBI chrNW_004955519:4,489,159...4,496,089
Ensembl chrNW_004955519:4,489,159...4,496,089
JBrowse link
G Sftpd surfactant protein D ISO (PMID:28228557) AgBase PMID:28228557 NCBI chrNW_004955510:213,468...226,096
Ensembl chrNW_004955510:213,438...225,896
JBrowse link
negative regulation by host of viral exo-alpha-sialidase activity term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apcs amyloid P component, serum ISO (PMID:23544079) BHF-UCL PMID:23544079 NCBI chrNW_004955468:11,388,154...11,389,259
Ensembl chrNW_004955468:11,388,192...11,390,314
JBrowse link
G Ptx3 pentraxin 3 ISO (PMID:23544079) BHF-UCL PMID:23544079 NCBI chrNW_004955448:8,366,795...8,373,010
Ensembl chrNW_004955448:8,366,925...8,372,411
JBrowse link
negative regulation by host of viral genome replication term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccnk cyclin K ISO (PMID:21555514) CACAO PMID:21555514 NCBI chrNW_004955438:20,826,818...20,850,496
Ensembl chrNW_004955438:20,835,825...20,849,999
JBrowse link
G Ceacam1 CEA cell adhesion molecule 1 ISO (MGI:55926|PMID:6327825) MGI PMID:6327825 MGI:55926 NCBI chrNW_004955555:426,894...446,235 JBrowse link
G Ddx3x DEAD-box helicase 3 X-linked ISO (PMID:24380861) AgBase PMID:24380861 NCBI chrNW_004955565:1,387,043...1,403,624
Ensembl chrNW_004955565:1,386,973...1,404,220
JBrowse link
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 ISO (MGI:5700304|PMID:16601681) UniProt PMID:16601681 MGI:5700304 NCBI chrNW_004955416:6,897,897...7,005,602
Ensembl chrNW_004955416:6,897,848...7,009,965
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase ISO (PMID:25244949) AgBase PMID:25244949 NCBI chrNW_004955439:18,664,230...19,953,358
Ensembl chrNW_004955439:18,664,379...19,951,152
JBrowse link
G Vapa VAMP associated protein A ISO (PMID:19515777) AgBase PMID:19515777 NCBI chrNW_004955402:2,274,248...2,309,461
Ensembl chrNW_004955402:2,270,850...2,298,227
JBrowse link
G Vapb VAMP associated protein B and C ISO (PMID:19515777) AgBase PMID:19515777 NCBI chrNW_004955445:1,098,454...1,122,879
Ensembl chrNW_004955445:1,098,454...1,120,823
JBrowse link
G Zbed1 zinc finger BED-type containing 1 ISO (PMID:25210186) UniProt PMID:25210186 NCBI chrNW_004955499:1,484,850...1,487,143 JBrowse link
G Zc3h12a zinc finger CCCH-type containing 12A ISO (PMID:23355615) UniProtKB PMID:23355615 NCBI chrNW_004955452:15,306,398...15,314,959
Ensembl chrNW_004955452:15,305,775...15,314,959
JBrowse link
negative regulation by host of viral glycoprotein metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apcs amyloid P component, serum ISO (PMID:23544079) BHF-UCL PMID:23544079 NCBI chrNW_004955468:11,388,154...11,389,259
Ensembl chrNW_004955468:11,388,192...11,390,314
JBrowse link
G Ptx3 pentraxin 3 ISO (PMID:23544079) BHF-UCL PMID:23544079 NCBI chrNW_004955448:8,366,795...8,373,010
Ensembl chrNW_004955448:8,366,925...8,372,411
JBrowse link
negative regulation by host of viral process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ceacam1 CEA cell adhesion molecule 1 ISO (MGI:3848729|PMID:19358828)
(MGI:1098064|PMID:9343248)
(MGI:2148352|PMID:11483763)
MGI PMID:9343248, PMID:11483763, PMID:19358828 MGI:1098064, MGI:2148352, MGI:3848729 NCBI chrNW_004955555:426,894...446,235 JBrowse link
G Ltf lactotransferrin ISO (PMID:12522210) AgBase PMID:12522210 NCBI chrNW_004955420:25,580,449...25,604,277
Ensembl chrNW_004955420:25,580,359...25,604,331
JBrowse link
negative regulation by host of viral release from host cell term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Vapb VAMP associated protein B and C ISO (PMID:19515777) AgBase PMID:19515777 NCBI chrNW_004955445:1,098,454...1,122,879
Ensembl chrNW_004955445:1,098,454...1,120,823
JBrowse link
negative regulation by host of viral transcription term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccl5 C-C motif chemokine ligand 5 ISO (PMID:10841574) UniProtKB PMID:10841574 NCBI chrNW_004955481:10,293,758...10,301,118
Ensembl chrNW_004955481:10,293,399...10,301,143
JBrowse link
G Hdac1 histone deacetylase 1 ISO (PMID:16540471) UniProtKB PMID:16540471 NCBI chrNW_004955452:10,636,366...10,668,873
Ensembl chrNW_004955452:10,636,366...10,670,864
JBrowse link
G Hmga2 high mobility group AT-hook 2 ISO (PMID:17005673) UniProtKB PMID:17005673 NCBI chrNW_004955458:12,493,790...12,624,805 JBrowse link
G Hmox1 heme oxygenase 1 ISO (PMID:25086213) AgBase PMID:25086213 NCBI chrNW_004955405:43,124,447...43,128,873
Ensembl chrNW_004955405:43,124,510...43,130,979
JBrowse link
G Inpp5k inositol polyphosphate-5-phosphatase K ISO (PMID:18774950) UniProtKB PMID:18774950 NCBI chrNW_004955481:1,651,422...1,674,402
Ensembl chrNW_004955481:1,651,902...1,673,893
JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit ISO (PMID:2833704) UniProtKB PMID:2833704 NCBI chrNW_004955464:1,107,598...1,110,326 JBrowse link
G Pou2f3 POU class 2 homeobox 3 ISO (PMID:14645924) UniProtKB PMID:14645924 NCBI chrNW_004955412:21,261,389...21,339,602
Ensembl chrNW_004955412:21,260,993...21,342,584
JBrowse link
G Tardbp TAR DNA binding protein ISO (PMID:7745706) BHF-UCL PMID:7745706 NCBI chrNW_004955486:2,656,121...2,674,808
Ensembl chrNW_004955486:2,656,121...2,674,807
JBrowse link
G Tfap4 transcription factor AP-4 ISO (PMID:14645924), (PMID:16540471) UniProtKB PMID:14645924, PMID:16540471 NCBI chrNW_004955442:13,160,467...13,174,288
Ensembl chrNW_004955442:13,160,450...13,175,057
JBrowse link
G Znf639 zinc finger protein 639 ISO (PMID:20484494) UniProtKB PMID:20484494 NCBI chrNW_004955420:8,513,192...8,522,689
Ensembl chrNW_004955420:8,516,973...8,522,629
JBrowse link
positive regulation by host of symbiont catalytic activity term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sugt1 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone ISO (PMID:23935490) AgBase PMID:23935490 NCBI chrNW_004955404:50,916,715...50,947,619
Ensembl chrNW_004955404:50,917,177...50,947,522
JBrowse link
positive regulation by host of viral genome replication term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hspa8 heat shock protein family A (Hsp70) member 8 ISO (MGI:5787727|PMID:26581985) AgBase PMID:26581985 MGI:5787727 NCBI chrNW_004955412:23,863,513...23,867,984
Ensembl chrNW_004955412:23,862,590...23,867,984
JBrowse link
G Nucks1 nuclear casein kinase and cyclin dependent kinase substrate 1 ISO (PMID:25116364) ParkinsonsUK-UCL PMID:25116364 NCBI chrNW_004955406:41,412,855...41,448,551
Ensembl chrNW_004955406:41,417,983...41,449,177
JBrowse link
G Ppib peptidylprolyl isomerase B ISO (PMID:15989969) AgBase PMID:15989969 NCBI chrNW_004955450:11,241,279...11,246,628
Ensembl chrNW_004955450:11,241,279...11,249,056
JBrowse link
G Stom stomatin ISO (MGI:5616479|PMID:25262680) AgBase PMID:25262680 MGI:5616479 NCBI chrNW_004955419:6,642,807...6,673,407
Ensembl chrNW_004955419:6,643,012...6,675,513
JBrowse link
G Tbc1d20 TBC1 domain family member 20 ISO (PMID:17686842) AgBase PMID:17686842 NCBI chrNW_004955597:291,541...313,799
Ensembl chrNW_004955597:291,541...314,292
JBrowse link
G Vapa VAMP associated protein A ISO (PMID:19515777) AgBase PMID:19515777 NCBI chrNW_004955402:2,274,248...2,309,461
Ensembl chrNW_004955402:2,270,850...2,298,227
JBrowse link
G Vapb VAMP associated protein B and C ISO (PMID:19515777) AgBase PMID:19515777 NCBI chrNW_004955445:1,098,454...1,122,879
Ensembl chrNW_004955445:1,098,454...1,120,823
JBrowse link
G Ythdc2 YTH domain containing 2 ISO (PMID:21559518) AgBase PMID:21559518 NCBI chrNW_004955408:33,380,822...33,448,188
Ensembl chrNW_004955408:33,381,023...33,446,239
JBrowse link
positive regulation by host of viral process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa2 annexin A2 ISO (PMID:25593157) AgBase PMID:25593157 NCBI chrNW_004955450:14,545,586...14,574,161
Ensembl chrNW_004955450:14,512,381...14,574,696
JBrowse link
G Apoe apolipoprotein E ISO (PMID:25122793) AgBase PMID:25122793 NCBI chrNW_004955555:1,998,170...2,002,003
Ensembl chrNW_004955555:1,999,711...2,001,888
JBrowse link
G Cav2 caveolin 2 ISO (PMID:25556234) AgBase PMID:25556234 NCBI chrNW_004955432:22,240,041...22,242,200 JBrowse link
G Ceacam1 CEA cell adhesion molecule 1 ISO (MGI:2148352|PMID:11483763)
(MGI:1098064|PMID:9343248)
MGI PMID:9343248, PMID:11483763 MGI:1098064, MGI:2148352 NCBI chrNW_004955555:426,894...446,235 JBrowse link
G Cfl1 cofilin 1 ISO (PMID:25556234) AgBase PMID:25556234 NCBI chrNW_004955422:19,479,181...19,482,571
Ensembl chrNW_004955422:19,479,181...19,482,571
JBrowse link
G Csf1r colony stimulating factor 1 receptor ISO (MGI:4840165|PMID:20889566) ARUK-UCL PMID:20889566 MGI:4840165 NCBI chrNW_004955415:4,434,486...4,462,505
Ensembl chrNW_004955415:4,434,453...4,461,751
JBrowse link
G Ifng interferon gamma ISO (MGI:4840165|PMID:20889566) ARUK-UCL PMID:20889566 MGI:4840165 NCBI chrNW_004955458:14,643,333...14,648,020
Ensembl chrNW_004955458:14,643,313...14,648,045
JBrowse link
G Igf2r insulin like growth factor 2 receptor ISO (PMID:20889566) ARUK-UCL PMID:20889566 NCBI chrNW_004955439:20,754,915...20,874,759
Ensembl chrNW_004955439:20,752,855...20,851,281
JBrowse link
G Pc pyruvate carboxylase ISO (PMID:23861867) AgBase PMID:23861867 NCBI chrNW_004955422:18,421,100...18,536,591
Ensembl chrNW_004955422:18,420,596...18,536,436
JBrowse link
G Ppib peptidylprolyl isomerase B ISO (PMID:15989969) AgBase PMID:15989969 NCBI chrNW_004955450:11,241,279...11,246,628
Ensembl chrNW_004955450:11,241,279...11,249,056
JBrowse link
positive regulation by host of viral release from host cell term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cav2 caveolin 2 ISO (PMID:25556234) AgBase PMID:25556234 NCBI chrNW_004955432:22,240,041...22,242,200 JBrowse link
G Pc pyruvate carboxylase ISO (PMID:23861867) AgBase PMID:23861867 NCBI chrNW_004955422:18,421,100...18,536,591
Ensembl chrNW_004955422:18,420,596...18,536,436
JBrowse link
G Vapa VAMP associated protein A ISO (PMID:19515777) AgBase PMID:19515777 NCBI chrNW_004955402:2,274,248...2,309,461
Ensembl chrNW_004955402:2,270,850...2,298,227
JBrowse link
G Vapb VAMP associated protein B and C ISO (PMID:19515777) AgBase PMID:19515777 NCBI chrNW_004955445:1,098,454...1,122,879
Ensembl chrNW_004955445:1,098,454...1,120,823
JBrowse link
positive regulation by host of viral transcription term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chd1 chromodomain helicase DNA binding protein 1 ISO (PMID:25297984) CACAO PMID:25297984 NCBI chrNW_004955418:14,200,618...14,268,361
Ensembl chrNW_004955418:14,200,617...14,268,361
JBrowse link
G Ctdp1 CTD phosphatase subunit 1 ISO (PMID:15723517) CAFA PMID:15723517 NCBI chrNW_004955402:62,817,822...62,914,250
Ensembl chrNW_004955402:62,817,974...62,914,276
JBrowse link
G Ep300 E1A binding protein p300 ISO (PMID:16687403) BHF-UCL PMID:16687403 NCBI chrNW_004955413:26,647,553...26,727,875
Ensembl chrNW_004955413:26,648,339...26,727,933
JBrowse link
G Fkbp8 FKBP prolyl isomerase 8 ISO (PMID:26748656) AgBase PMID:26748656 NCBI chrNW_004955524:3,037,825...3,044,296
Ensembl chrNW_004955524:3,036,953...3,044,296
JBrowse link
G Hpn hepsin ISO (PMID:15614436) UniProtKB PMID:15614436 NCBI chrNW_004955468:4,384,630...4,399,881
Ensembl chrNW_004955468:4,384,630...4,400,379
JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit ISO (PMID:2833704) UniProtKB PMID:2833704 NCBI chrNW_004955464:1,107,598...1,110,326 JBrowse link
G Lef1 lymphoid enhancer binding factor 1 ISO (PMID:7657162) UniProtKB PMID:7657162 NCBI chrNW_004955496:1,728,840...1,827,749
Ensembl chrNW_004955496:1,728,840...1,828,698
JBrowse link
G Nucks1 nuclear casein kinase and cyclin dependent kinase substrate 1 ISO (PMID:25116364) ParkinsonsUK-UCL PMID:25116364 NCBI chrNW_004955406:41,412,855...41,448,551
Ensembl chrNW_004955406:41,417,983...41,449,177
JBrowse link
G Rrp1b ribosomal RNA processing 1B ISO (PMID:26311876) UniProtKB PMID:26311876 NCBI chrNW_004955407:38,553,866...38,577,547
Ensembl chrNW_004955407:38,553,814...38,577,465
JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 ISO (PMID:16687403) BHF-UCL PMID:16687403 NCBI chrNW_004955495:2,021,671...2,105,155
Ensembl chrNW_004955495:2,021,566...2,105,397
JBrowse link
G Smarcb1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 ISO (PMID:16687403) BHF-UCL PMID:16687403 NCBI chrNW_004955455:8,420,263...8,457,105
Ensembl chrNW_004955455:8,415,839...8,457,097
JBrowse link
G Snw1 SNW domain containing 1 ISO (PMID:15905409)
(PMID:19818711)
UniProtKB PMID:15905409, PMID:19818711 NCBI chrNW_004955438:1,561,562...1,601,492
Ensembl chrNW_004955438:1,561,568...1,601,492
JBrowse link
G Sp1 Sp1 transcription factor ISO (PMID:2833704) UniProtKB PMID:2833704 NCBI chrNW_004955458:644,435...677,360
Ensembl chrNW_004955458:644,378...677,441
JBrowse link
G Taf11 TATA-box binding protein associated factor 11 ISO (PMID:9108034) UniProtKB PMID:9108034 NCBI chrNW_004955437:2,908,939...2,916,154
Ensembl chrNW_004955437:2,908,939...2,916,154
JBrowse link
G Tfap4 transcription factor AP-4 ISO (PMID:2833704) UniProtKB PMID:2833704 NCBI chrNW_004955442:13,160,467...13,174,288
Ensembl chrNW_004955442:13,160,450...13,175,057
JBrowse link
G Znf639 zinc finger protein 639 ISO (PMID:20484494) UniProtKB PMID:20484494 NCBI chrNW_004955420:8,513,192...8,522,689
Ensembl chrNW_004955420:8,516,973...8,522,629
JBrowse link

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.