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ONTOLOGY REPORT - ANNOTATIONS


Term:modulation by host of symbiont process
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Accession:GO:0051851 term browser browse the term
Definition:The process in which an organism effects a change in the structure or processes of a symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
Synonyms:related_synonym: modification by host of symbiont morphology or physiology


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catabolism by host of symbiont cell wall chitin term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHIA chitinase acidic ISO (MGI:1931335|PMID:11085997) UniProt PMID:11085997 MGI:1931335 NCBI chr 4:109,035,323...109,046,499
Ensembl chr 4:109,035,326...109,046,499
JBrowse link
catabolism by host of symbiont protein term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANXA2 annexin A2 IEA Ensembl GO_REF:0000107 NCBI chr 1:111,588,721...111,635,064
Ensembl chr 1:111,588,306...111,635,064
JBrowse link
host-mediated regulation of intestinal microbiota composition term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LRRC19 leucine rich repeat containing 19 IEA Ensembl GO_REF:0000107 NCBI chr 1:196,129,816...196,142,696
Ensembl chr 1:196,129,905...196,142,701
JBrowse link
G NAPEPLD N-acyl phosphatidylethanolamine phospholipase D IEA Ensembl GO_REF:0000107 NCBI chr 9:103,210,655...103,309,018
Ensembl chr 9:103,210,748...103,262,454
JBrowse link
maintenance of symbiont-containing vacuole by host term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AQP1 aquaporin 1 (Colton blood group) ISS
IEA
UniProt
Ensembl
GO_REF:0000024, GO_REF:0000107 NCBI chr18:42,063,482...42,076,741 JBrowse link
modulation by host of RNA binding by virus term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUCKS1 nuclear casein kinase and cyclin dependent kinase substrate 1 IEA Ensembl GO_REF:0000107 NCBI chr 9:66,398,845...66,435,548
Ensembl chr 9:66,398,227...66,435,577
JBrowse link
modulation by host of viral process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HSPA8 heat shock protein family A (Hsp70) member 8 ISO (MGI:5787727|PMID:26581985) AgBase PMID:26581985 MGI:5787727 NCBI chr 9:49,982,278...49,986,760
Ensembl chr 9:49,982,284...49,990,508
JBrowse link
modulation by host of viral RNA genome replication term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FBXL2 F-box and leucine rich repeat protein 2 IEA Ensembl GO_REF:0000107 NCBI chr13:19,128,145...19,206,458
Ensembl chr13:19,127,358...19,221,241
JBrowse link
G FMR1 FMRP translational regulator 1 IEA Ensembl GO_REF:0000107 NCBI chr  X:120,361,232...120,400,282
Ensembl chr  X:120,361,229...120,399,835
JBrowse link
G PHB prohibitin IEA Ensembl GO_REF:0000107 NCBI chr12:25,596,520...25,609,693
Ensembl chr12:25,584,443...25,609,656
JBrowse link
G VAPB VAMP associated protein B and C ISO (PMID:19515777) AgBase PMID:19515777 NCBI chr17:58,594,749...58,644,925
Ensembl chr17:58,594,749...58,644,918
JBrowse link
modulation by host of viral RNA-binding transcription factor activity term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUCKS1 nuclear casein kinase and cyclin dependent kinase substrate 1 IEA Ensembl GO_REF:0000107 NCBI chr 9:66,398,845...66,435,548
Ensembl chr 9:66,398,227...66,435,577
JBrowse link
modulation by host of viral transcription term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PSMC3 proteasome 26S subunit, ATPase 3 IEA Ensembl GO_REF:0000107 NCBI chr 2:15,185,482...15,191,189
Ensembl chr 2:15,066,547...15,193,085
JBrowse link
G RAPSN receptor associated protein of the synapse IEA Ensembl GO_REF:0000107 NCBI chr 2:15,166,968...15,181,011
Ensembl chr 2:15,066,547...15,193,085
JBrowse link
negative regulation by host of symbiont molecular function term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANXA2 annexin A2 IEA Ensembl GO_REF:0000107 NCBI chr 1:111,588,721...111,635,064
Ensembl chr 1:111,588,306...111,635,064
JBrowse link
G RAB9A RAB9A, member RAS oncogene family IEA Ensembl GO_REF:0000107 NCBI chr  X:10,328,085...10,349,399
Ensembl chr  X:10,293,757...10,349,387
JBrowse link
G SFTPD surfactant protein D IEA Ensembl GO_REF:0000107 NCBI chr14:82,051,400...82,069,258
Ensembl chr14:82,051,451...82,067,976
JBrowse link
negative regulation by host of viral exo-alpha-sialidase activity term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APCS amyloid P component, serum IEA Ensembl GO_REF:0000107 NCBI chr 4:90,900,585...90,901,854
Ensembl chr 4:90,898,686...90,901,875
JBrowse link
G PTX3 pentraxin 3 IEA Ensembl GO_REF:0000107 NCBI chr13:97,273,594...97,279,570
Ensembl chr13:97,273,594...97,279,569
JBrowse link
negative regulation by host of viral genome replication term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCL8 chemokine (C-C motif) ligand 8 IEA Ensembl GO_REF:0000107 NCBI chr12:40,740,468...40,741,970
Ensembl chr12:40,740,023...40,742,022
JBrowse link
G CCNK cyclin K IEA Ensembl GO_REF:0000107 NCBI chr 7:120,487,140...120,514,223
Ensembl chr 7:120,487,206...120,514,014
JBrowse link
G CEACAM1 CEA cell adhesion molecule 1 ISO (MGI:55926|PMID:6327825) MGI PMID:6327825 MGI:55926 NCBI chr 6:49,437,308...49,460,614 JBrowse link
G DDX3X DEAD-box helicase 3 X-linked IMP (PMID:24380861) AgBase PMID:24380861 NCBI chr  X:36,988,031...37,005,496
Ensembl chr  X:36,988,031...37,044,769
JBrowse link
G EIF2AK4 eukaryotic translation initiation factor 2 alpha kinase 4 ISO (MGI:5700304|PMID:16601681) UniProt PMID:16601681 MGI:5700304 NCBI chr 1:131,244,818...131,355,240
Ensembl chr 1:131,245,463...131,355,224
JBrowse link
G PRKN parkin RBR E3 ubiquitin protein ligase IEA Ensembl GO_REF:0000107 NCBI chr 1:5,698,508...6,731,132
Ensembl chr 1:5,465,511...6,730,881
JBrowse link
G VAPA VAMP associated protein A IEA Ensembl GO_REF:0000107 NCBI chr 6:98,212,335...98,254,272
Ensembl chr 6:98,207,580...98,254,288
JBrowse link
G VAPB VAMP associated protein B and C ISO (PMID:19515777) AgBase PMID:19515777 NCBI chr17:58,594,749...58,644,925
Ensembl chr17:58,594,749...58,644,918
JBrowse link
G ZBED1 zinc finger BED-type containing 1 IEA Ensembl GO_REF:0000107
G ZC3H12A zinc finger CCCH-type containing 12A IEA Ensembl GO_REF:0000107 NCBI chr 6:93,541,334...93,551,200
Ensembl chr 6:93,541,334...93,551,195
JBrowse link
negative regulation by host of viral glycoprotein metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APCS amyloid P component, serum IEA Ensembl GO_REF:0000107 NCBI chr 4:90,900,585...90,901,854
Ensembl chr 4:90,898,686...90,901,875
JBrowse link
G PTX3 pentraxin 3 IEA Ensembl GO_REF:0000107 NCBI chr13:97,273,594...97,279,570
Ensembl chr13:97,273,594...97,279,569
JBrowse link
negative regulation by host of viral process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APCS amyloid P component, serum IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:90,900,585...90,901,854
Ensembl chr 4:90,898,686...90,901,875
JBrowse link
G CEACAM1 CEA cell adhesion molecule 1 ISO (MGI:2148352|PMID:11483763)
(MGI:1098064|PMID:9343248)
(MGI:3848729|PMID:19358828)
MGI PMID:9343248, PMID:11483763, PMID:19358828 MGI:1098064, MGI:2148352, MGI:3848729 NCBI chr 6:49,437,308...49,460,614 JBrowse link
G CRP C-reactive protein, pentraxin-related IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:90,793,361...90,801,020
Ensembl chr 4:90,722,352...90,805,236
JBrowse link
G LTF lactotransferrin IEA Ensembl GO_REF:0000107 NCBI chr13:29,413,886...29,445,751
Ensembl chr13:29,413,886...29,445,737
JBrowse link
G PTX3 pentraxin 3 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:97,273,594...97,279,570
Ensembl chr13:97,273,594...97,279,569
JBrowse link
negative regulation by host of viral release from host cell term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G VAPB VAMP associated protein B and C ISO (PMID:19515777) AgBase PMID:19515777 NCBI chr17:58,594,749...58,644,925
Ensembl chr17:58,594,749...58,644,918
JBrowse link
negative regulation by host of viral transcription term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCL3L1 chemokine (C-C motif) ligand 3-like 1 ISS UniProt GO_REF:0000024 NCBI chr12:39,491,999...39,493,345
Ensembl chr12:39,491,885...39,493,370
JBrowse link
G CCL4 C-C motif chemokine ligand 4 ISO (PMID:10841574) UniProtKB PMID:10841574 NCBI chr12:39,479,190...39,480,511
Ensembl chr12:39,478,885...39,557,358
JBrowse link
G CCL5 C-C motif chemokine ligand 5 IEA Ensembl GO_REF:0000107 NCBI chr12:39,652,731...39,659,121
Ensembl chr12:39,648,598...39,659,118
JBrowse link
G HDAC1 histone deacetylase 1 IEA Ensembl GO_REF:0000107 NCBI chr 6:88,749,611...88,785,220
Ensembl chr 6:88,749,634...88,785,412
JBrowse link
G HMGA2 high mobility group AT-hook 2 ISO (PMID:17005673) UniProtKB PMID:17005673 NCBI chr 5:30,188,521...30,329,635 JBrowse link
G HMOX1 heme oxygenase 1 IMP (PMID:25086213) AgBase PMID:25086213
G INPP5K inositol polyphosphate-5-phosphatase K IEA Ensembl GO_REF:0000107 NCBI chr12:47,717,898...47,738,540
Ensembl chr12:47,717,907...47,738,477
JBrowse link
G JUN Jun proto-oncogene, AP-1 transcription factor subunit ISO (PMID:2833704) UniProtKB PMID:2833704 NCBI chr 6:153,686,425...153,687,635 JBrowse link
G LOC100621006 RE1-silencing transcription factor-like ISS UniProt GO_REF:0000024 NCBI chr 8:56,048,280...56,215,011
Ensembl chr 8:56,035,150...56,215,013
JBrowse link
G POU2F3 POU class 2 homeobox 3 IEA Ensembl GO_REF:0000107 NCBI chr 9:47,376,852...47,458,265
Ensembl chr 9:47,376,853...47,460,166
JBrowse link
G REST RE1 silencing transcription factor ISS UniProt GO_REF:0000024 NCBI chr 8:56,035,182...56,061,140
Ensembl chr 8:56,035,150...56,215,013
JBrowse link
G TARDBP TAR DNA binding protein IEA Ensembl GO_REF:0000107 NCBI chr 6:71,213,584...71,227,707
Ensembl chr 6:71,213,852...71,227,704
JBrowse link
G TFAP4 transcription factor AP-4 IEA Ensembl GO_REF:0000107 NCBI chr 3:38,043,735...38,060,820
Ensembl chr 3:38,048,128...38,060,819
JBrowse link
G ZNF639 zinc finger protein 639 IEA Ensembl GO_REF:0000107 NCBI chr13:117,370,496...117,384,046
Ensembl chr13:117,370,543...117,386,268
JBrowse link
positive regulation by host of symbiont catalytic activity term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SUGT1 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone IEA Ensembl GO_REF:0000107 NCBI chr11:25,905,442...25,960,665
Ensembl chr11:25,906,010...25,954,210
JBrowse link
positive regulation by host of viral genome replication term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HSPA8 heat shock protein family A (Hsp70) member 8 IEA Ensembl GO_REF:0000107 NCBI chr 9:49,982,278...49,986,760
Ensembl chr 9:49,982,284...49,990,508
JBrowse link
G NUCKS1 nuclear casein kinase and cyclin dependent kinase substrate 1 IEA Ensembl GO_REF:0000107 NCBI chr 9:66,398,845...66,435,548
Ensembl chr 9:66,398,227...66,435,577
JBrowse link
G PPIB peptidylprolyl isomerase B IEA Ensembl GO_REF:0000107 NCBI chr 1:107,886,663...107,893,155
Ensembl chr 1:107,886,658...107,897,098
JBrowse link
G STOM stomatin IEA Ensembl GO_REF:0000107 NCBI chr 1:261,380,087...261,407,713
Ensembl chr 1:261,377,866...261,407,716
JBrowse link
G TBC1D20 TBC1 domain family member 20 IEA Ensembl GO_REF:0000107 NCBI chr17:34,760,379...34,778,301
Ensembl chr17:34,760,379...34,779,251
JBrowse link
G VAPA VAMP associated protein A IEA Ensembl GO_REF:0000107 NCBI chr 6:98,212,335...98,254,272
Ensembl chr 6:98,207,580...98,254,288
JBrowse link
G VAPB VAMP associated protein B and C ISO (PMID:19515777) AgBase PMID:19515777 NCBI chr17:58,594,749...58,644,925
Ensembl chr17:58,594,749...58,644,918
JBrowse link
G YTHDC2 YTH domain containing 2 IEA Ensembl GO_REF:0000107 NCBI chr 2:118,003,402...118,092,176
Ensembl chr 2:117,871,336...118,104,508
JBrowse link
positive regulation by host of viral process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANXA2 annexin A2 IMP (PMID:25593157) AgBase PMID:25593157 NCBI chr 1:111,588,721...111,635,064
Ensembl chr 1:111,588,306...111,635,064
JBrowse link
G APOE apolipoprotein E IEA Ensembl GO_REF:0000107 NCBI chr 6:51,373,113...51,375,333
Ensembl chr 6:51,372,259...51,377,794
JBrowse link
G CAV2 caveolin 2 ISO (PMID:25556234) AgBase PMID:25556234 NCBI chr18:29,699,012...29,707,277
Ensembl chr18:29,699,020...29,707,277
JBrowse link
G CEACAM1 CEA cell adhesion molecule 1 ISO (MGI:2148352|PMID:11483763)
(MGI:1098064|PMID:9343248)
MGI PMID:9343248, PMID:11483763 MGI:1098064, MGI:2148352 NCBI chr 6:49,437,308...49,460,614 JBrowse link
G CFL1 cofilin 1 ISO (PMID:25556234) AgBase PMID:25556234 NCBI chr 2:6,471,558...6,475,019
Ensembl chr 2:6,469,254...6,475,035
JBrowse link
G CSF1R colony stimulating factor 1 receptor IEA Ensembl GO_REF:0000107 NCBI chr 2:151,102,138...151,130,311
Ensembl chr 2:151,102,138...151,147,634
JBrowse link
G IFNG interferon gamma ISO (MGI:4840165|PMID:20889566) ARUK-UCL PMID:20889566 MGI:4840165 NCBI chr 5:32,477,906...32,482,670
Ensembl chr 5:32,477,848...32,482,752
JBrowse link
G IGF2R insulin like growth factor 2 receptor IEA Ensembl GO_REF:0000107 NCBI chr 1:7,369,485...7,472,480
Ensembl chr 1:7,368,103...7,472,548
JBrowse link
G PC pyruvate carboxylase ISO (PMID:23861867) AgBase PMID:23861867 NCBI chr 2:5,566,608...5,587,797
Ensembl chr 2:5,518,430...5,587,797
JBrowse link
G PPIB peptidylprolyl isomerase B ISO (PMID:15989969) AgBase PMID:15989969 NCBI chr 1:107,886,663...107,893,155
Ensembl chr 1:107,886,658...107,897,098
JBrowse link
positive regulation by host of viral release from host cell term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAV2 caveolin 2 IEA Ensembl GO_REF:0000107 NCBI chr18:29,699,012...29,707,277
Ensembl chr18:29,699,020...29,707,277
JBrowse link
G LOC100738134 zinc finger protein 501 IEA Ensembl GO_REF:0000107 NCBI chr13:27,930,889...27,958,202
Ensembl chr13:27,930,928...27,944,388
JBrowse link
G PC pyruvate carboxylase IEA Ensembl GO_REF:0000107 NCBI chr 2:5,566,608...5,587,797
Ensembl chr 2:5,518,430...5,587,797
JBrowse link
G VAPA VAMP associated protein A IEA Ensembl GO_REF:0000107 NCBI chr 6:98,212,335...98,254,272
Ensembl chr 6:98,207,580...98,254,288
JBrowse link
G VAPB VAMP associated protein B and C ISO (PMID:19515777) AgBase PMID:19515777 NCBI chr17:58,594,749...58,644,925
Ensembl chr17:58,594,749...58,644,918
JBrowse link
positive regulation by host of viral transcription term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHD1 chromodomain helicase DNA binding protein 1 IEA Ensembl GO_REF:0000107 NCBI chr 2:105,113,149...105,205,303
Ensembl chr 2:105,113,668...105,203,152
JBrowse link
G CTDP1 CTD phosphatase subunit 1 IEA Ensembl GO_REF:0000107 NCBI chr 1:145,769,763...145,811,673
Ensembl chr 1:145,769,768...145,811,678
JBrowse link
G EP300 E1A binding protein p300 IEA Ensembl GO_REF:0000107 NCBI chr 5:7,311,165...7,394,515
Ensembl chr 5:7,311,171...7,393,760
JBrowse link
G FKBP8 FKBP prolyl isomerase 8 IMP (PMID:26748656) AgBase PMID:26748656 NCBI chr 2:59,256,546...59,267,171
Ensembl chr 2:59,252,073...59,267,165
JBrowse link
G GTF2B general transcription factor IIB IEA Ensembl GO_REF:0000107 NCBI chr 4:127,522,802...127,559,605
Ensembl chr 4:127,522,524...127,571,378
JBrowse link
G HPN hepsin IEA Ensembl GO_REF:0000107 NCBI chr 6:44,608,076...44,628,044
Ensembl chr 6:44,608,071...44,628,049
JBrowse link
G JUN Jun proto-oncogene, AP-1 transcription factor subunit ISO (PMID:2833704) UniProtKB PMID:2833704 NCBI chr 6:153,686,425...153,687,635 JBrowse link
G LEF1 lymphoid enhancer binding factor 1 IEA Ensembl GO_REF:0000107 NCBI chr 8:113,824,511...113,944,078
Ensembl chr 8:113,824,547...113,944,078
JBrowse link
G NUCKS1 nuclear casein kinase and cyclin dependent kinase substrate 1 IEA Ensembl GO_REF:0000107 NCBI chr 9:66,398,845...66,435,548
Ensembl chr 9:66,398,227...66,435,577
JBrowse link
G RRP1B ribosomal RNA processing 1B IEA Ensembl GO_REF:0000107 NCBI chr13:206,629,176...206,653,374
Ensembl chr13:206,629,178...206,653,371
JBrowse link
G SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 IEA Ensembl GO_REF:0000107 NCBI chr 2:69,717,175...69,810,301
Ensembl chr 2:69,662,238...69,810,298
JBrowse link
G SMARCB1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 ISO (PMID:16687403) BHF-UCL PMID:16687403 NCBI chr14:49,874,981...49,906,043
Ensembl chr14:49,874,984...49,906,048
JBrowse link
G SNW1 SNW domain containing 1 ISO (PMID:15905409)
(PMID:19818711)
UniProtKB PMID:15905409, PMID:19818711 NCBI chr 7:100,718,298...100,749,414
Ensembl chr 7:100,718,036...100,749,356
JBrowse link
G SP1 Sp1 transcription factor IEA Ensembl GO_REF:0000107 NCBI chr 5:18,588,763...18,633,177
Ensembl chr 5:18,588,758...18,630,089
JBrowse link
G TAF11 TATA-box binding protein associated factor 11 IEA Ensembl GO_REF:0000107 NCBI chr 7:30,799,992...30,811,771
Ensembl chr 7:30,799,965...30,811,768
JBrowse link
G TFAP4 transcription factor AP-4 IEA Ensembl GO_REF:0000107 NCBI chr 3:38,043,735...38,060,820
Ensembl chr 3:38,048,128...38,060,819
JBrowse link
G ZNF639 zinc finger protein 639 IEA Ensembl GO_REF:0000107 NCBI chr13:117,370,496...117,384,046
Ensembl chr13:117,370,543...117,386,268
JBrowse link

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.