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ONTOLOGY REPORT - ANNOTATIONS


Term:killing by host of symbiont cells
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Accession:GO:0051873 term browser browse the term
Definition:Any process mediated by an organism that results in the death of cells in the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.
Synonyms:broad_synonym: disruption by host of symbiont cells
 alt_id: GO:0051852


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killing by host of symbiont cells term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Camp cathelicidin antimicrobial peptide ISO MGI:MGI:2182791 (MGI:MGI:3611523|PMID:16177355)
(PMID:16020269), (PMID:16177355)
RGD PMID:16020269, PMID:16177355 MGI:MGI:3611523 NCBI chr 8:117,930,557...117,932,371
Ensembl chr 8:117,930,546...117,932,518
JBrowse link
G Defa5 defensin alpha 5 ISO (PMID:9169780) RGD PMID:9169780 NCBI chr16:75,338,050...75,340,401
Ensembl chr16:75,338,052...75,340,360
JBrowse link
G Defb14 defensin beta 14 ISO (PMID:16436752) RGD PMID:16436752 NCBI chr16:75,647,523...75,650,913
Ensembl chr16:75,647,680...75,648,538
JBrowse link
G Gapdh glyceraldehyde-3-phosphate dehydrogenase ISO (PMID:22832495) RGD PMID:22832495 NCBI chr 4:157,676,336...157,680,322
Ensembl chr 4:157,676,595...157,679,962
JBrowse link
G Mbl1 mannose binding lectin 1 ISO MGI:MGI:96924 (MGI:MGI:3577322|PMID:15148336) RGD PMID:15148336 MGI:MGI:3577322 NCBI chr16:18,736,154...18,742,193
Ensembl chr16:18,736,154...18,742,193
JBrowse link
G Mbl2 mannose binding lectin 2 ISO MGI:MGI:96923 (MGI:MGI:3577322|PMID:15148336) RGD PMID:15148336 MGI:MGI:3577322 NCBI chr 1:248,435,069...248,442,669
Ensembl chr 1:248,723,397...248,729,962
JBrowse link
G Pf4 platelet factor 4 ISO (PMID:23245326) RGD PMID:23245326 NCBI chr14:18,848,549...18,849,258
Ensembl chr14:18,848,549...18,849,258
JBrowse link
cytolysis by host of symbiont cells term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Camp cathelicidin antimicrobial peptide ISO (PMID:20421939) RGD PMID:20421939 NCBI chr 8:117,930,557...117,932,371
Ensembl chr 8:117,930,546...117,932,518
JBrowse link
G Cfhr1 complement factor H-related 1 ISO (PMID:23487775) RGD PMID:23487775 NCBI chr13:56,862,666...56,877,650
Ensembl chr13:56,836,994...56,877,650
JBrowse link
G Defb41 defensin beta 41 ISO (PMID:28181499) RGD PMID:28181499 NCBI chr15:46,179,787...46,182,308
Ensembl chr15:46,179,787...46,182,308
JBrowse link
G F2 coagulation factor II IEA
ISO
GO_REF:0000107
(PMID:20421939)
Ensembl
RGD
PMID:20421939 GO_REF:0000107 NCBI chr 3:80,529,468...80,542,993
Ensembl chr 3:80,529,428...80,543,031
JBrowse link
G Hrg histidine-rich glycoprotein ISO
IEA
(PMID:18797515)
GO_REF:0000107
RGD
Ensembl
PMID:18797515 GO_REF:0000107 NCBI chr11:81,621,274...81,639,938
Ensembl chr11:81,621,283...81,639,952
JBrowse link
G Reg3g regenerating family member 3 gamma ISO (PMID:16931762)
(MGI:MGI:5897756|PMID:16931762)
RGD PMID:16931762 MGI:MGI:5897756 NCBI chr 4:109,529,679...109,532,234
Ensembl chr 4:109,529,679...109,532,234
JBrowse link
G Romo1 reactive oxygen species modulator 1 ISO (PMID:22083756) RGD PMID:22083756 NCBI chr 3:151,688,213...151,689,813
Ensembl chr 3:151,688,454...151,689,711
JBrowse link
G Spag11b sperm associated antigen 11b ISO (PMID:16411022) RGD PMID:16411022
G Spag11bl sperm associated antigen 11b-like ISO (PMID:16411022) RGD PMID:16411022 NCBI chr16:75,145,234...75,148,750
Ensembl chr16:75,145,401...75,147,415
JBrowse link
neutrophil-mediated killing of fungus term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elane elastase, neutrophil expressed ISO MGI:MGI:2182177 (MGI:MGI:4353632|PMID:11907569) RGD PMID:11907569 MGI:MGI:4353632 NCBI chr 7:12,638,320...12,640,168
Ensembl chr 7:12,638,322...12,640,232
JBrowse link
G Ncf1 neutrophil cytosolic factor 1 ISO MGI:MGI:3576788 (MGI:MGI:4353632|PMID:11907569) RGD PMID:11907569 MGI:MGI:4353632 NCBI chr12:25,497,104...25,506,300
Ensembl chr12:25,497,104...25,506,300
JBrowse link
neutrophil-mediated killing of gram-negative bacterium term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elane elastase, neutrophil expressed ISO (PMID:20421939) RGD PMID:20421939 NCBI chr 7:12,638,320...12,640,168
Ensembl chr 7:12,638,322...12,640,232
JBrowse link
G F2 coagulation factor II IEA
ISO
GO_REF:0000107
(PMID:20421939)
Ensembl
RGD
PMID:20421939 GO_REF:0000107 NCBI chr 3:80,529,468...80,542,993
Ensembl chr 3:80,529,428...80,543,031
JBrowse link
G Trem1 triggering receptor expressed on myeloid cells 1 ISO MGI:MGI:1930003 (MGI:MGI:5471912|PMID:23241959) RGD PMID:23241959 MGI:MGI:5471912 NCBI chr 9:14,727,887...14,743,371
Ensembl chr 9:14,727,976...14,809,447
JBrowse link
G Trem3 triggering receptor expressed on myeloid cells 3 IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 9:14,713,935...14,725,945
Ensembl chr 9:14,713,935...14,724,093
JBrowse link
G Tusc2 tumor suppressor 2, mitochondrial calcium regulator ISO MGI:MGI:3706236 (MGI:MGI:5518492|PMID:24042119) RGD PMID:24042119 MGI:MGI:5518492 NCBI chr 8:116,318,963...116,322,181
Ensembl chr 8:116,318,963...116,322,181
JBrowse link
neutrophil-mediated killing of gram-positive bacterium term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctsg cathepsin G ISO
IEA
MGI:MGI:2182170 (MGI:MGI:4353632|PMID:11907569)
GO_REF:0000107
RGD
Ensembl
PMID:11907569 GO_REF:0000107, MGI:MGI:4353632 NCBI chr15:35,107,333...35,113,678
Ensembl chr15:35,111,091...35,113,678
JBrowse link
G Ncf1 neutrophil cytosolic factor 1 ISO MGI:MGI:3576788 (MGI:MGI:4353632|PMID:11907569) RGD PMID:11907569 MGI:MGI:4353632 NCBI chr12:25,497,104...25,506,300
Ensembl chr12:25,497,104...25,506,300
JBrowse link
positive regulation of neutrophil mediated killing of fungus term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arg1 arginase 1 ISO (PMID:15546957) RGD PMID:15546957 NCBI chr 1:21,525,421...21,537,872
Ensembl chr 1:21,525,421...21,537,863
JBrowse link
G Cxcl1 C-X-C motif chemokine ligand 1 IEA
ISO
GO_REF:0000107
(MGI:MGI:5586806|PMID:10725737)
Ensembl
RGD
PMID:10725737 GO_REF:0000107, MGI:MGI:5586806 NCBI chr14:18,743,678...18,745,457
Ensembl chr14:18,743,685...18,745,457
JBrowse link
G Pomc proopiomelanocortin ISO (PMID:10670585) RGD PMID:10670585 NCBI chr 6:28,382,937...28,388,771
Ensembl chr 6:28,382,962...28,388,967
JBrowse link
positive regulation of neutrophil mediated killing of gram-negative bacterium term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G F2rl1 F2R like trypsin receptor 1 ISO (PMID:21501162) RGD PMID:21501162 NCBI chr 2:25,222,324...25,235,275
Ensembl chr 2:25,222,328...25,235,275
JBrowse link
regulation of neutrophil mediated killing of gram-negative bacterium term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cxcl6 C-X-C motif chemokine ligand 6 ISO MGI:MGI:4819800 (MGI:MGI:4819434|PMID:20643340) RGD PMID:20643340 MGI:MGI:4819434 NCBI chr14:18,860,201...18,920,839
Ensembl chr14:18,860,264...18,862,407
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20017
    interspecies interaction between organisms 1912
      interaction with symbiont 99
        killing by host of symbiont cells 26
          cytolysis by host of symbiont cells + 9
          neutrophil-mediated killing of symbiont cell + 12
Path 2
Term Annotations click to browse term
  biological_process 20017
    response to stimulus 10569
      response to external stimulus 3215
        response to external biotic stimulus 1707
          response to other organism 1703
            defense response to other organism 1114
              killing by host of symbiont cells 26
                cytolysis by host of symbiont cells + 9
                neutrophil-mediated killing of symbiont cell + 12
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.