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ONTOLOGY REPORT - ANNOTATIONS


Term:positive regulation of synapse assembly
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Accession:GO:0051965 term browser browse the term
Definition:Any process that activates, maintains or increases the frequency, rate or extent of synapse assembly, the aggregation, arrangement and bonding together of a set of components to form a synapse.
Synonyms:exact_synonym: positive regulation of synapse biogenesis;   positive regulation of synaptogenesis;   up regulation of synapse assembly;   upregulation of synapse assembly
 narrow_synonym: activation of synapse assembly;   stimulation of synapse assembly


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positive regulation of synapse assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Actr3 actin related protein 3 JBrowse link 13 41,695,520 41,738,622 RGD:2306201
G Adgrb1 adhesion G protein-coupled receptor B1 JBrowse link 7 115,766,484 115,828,514 RGD:1624291
G Adgrb2 adhesion G protein-coupled receptor B2 JBrowse link 5 148,168,530 148,231,587 RGD:1624291
G Adgrb3 adhesion G protein-coupled receptor B3 JBrowse link 9 31,280,623 32,022,535 RGD:1624291
G Adgre5 adhesion G protein-coupled receptor E5 JBrowse link 19 24,854,981 24,875,712 RGD:1624291
G Adgrl1 adhesion G protein-coupled receptor L1 JBrowse link 19 25,029,037 25,069,146 RGD:1624291
RGD:1600115
G Adgrl2 adhesion G protein-coupled receptor L2 JBrowse link 2 258,792,838 258,997,145 RGD:1624291
G Adgrl3 adhesion G protein-coupled receptor L3 JBrowse link 14 28,362,176 29,226,085 RGD:1624291
RGD:1600115
G Adnp activity-dependent neuroprotector homeobox JBrowse link 3 164,937,188 164,964,819 RGD:2312779
G Amigo1 adhesion molecule with Ig like domain 1 JBrowse link 2 210,977,125 210,982,582 RGD:1624291
G Amigo2 adhesion molecule with Ig like domain 2 JBrowse link 7 138,704,124 138,707,221 RGD:1624291
RGD:1600115
G Amigo3 adhesion molecule with Ig like domain 3 JBrowse link 8 116,830,773 116,832,299 RGD:1624291
G Asic2 acid sensing ion channel subunit 2 JBrowse link 10 68,247,800 69,347,223 RGD:1624291
RGD:1600115
G Bdnf brain-derived neurotrophic factor JBrowse link 3 100,768,637 100,819,216 RGD:1624291
RGD:1600115
G Bhlhb9 basic helix-loop-helix family member B9 JBrowse link X 106,359,981 106,393,457 RGD:1624291
G Cbln1 cerebellin 1 precursor JBrowse link 19 20,607,507 20,611,316 RGD:1624291
G Cbln2 cerebellin 2 precursor JBrowse link 18 83,775,568 83,783,841 RGD:1624291
G Clstn1 calsyntenin 1 JBrowse link 5 166,533,262 166,601,686 RGD:1624291
RGD:13792537
G Clstn2 calsyntenin 2 JBrowse link 8 105,322,577 106,036,821 RGD:1624291
RGD:13792537
RGD:1600115
G Clstn3 calsyntenin 3 JBrowse link 4 157,044,736 157,078,013 RGD:1624291
RGD:13792537
RGD:1600115
G Cux2 cut-like homeobox 2 JBrowse link 12 40,016,774 40,221,067 RGD:1624291
G Dlg5 discs large MAGUK scaffold protein 5 JBrowse link 15 120,213 230,312 RGD:1624291
G Eef2k eukaryotic elongation factor-2 kinase JBrowse link 1 190,780,211 190,839,926 RGD:10401235
G Efna5 ephrin A5 JBrowse link 9 110,054,002 110,329,878 RGD:1624291
RGD:1600115
G Ephb1 Eph receptor B1 JBrowse link 8 110,376,954 110,813,193 RGD:1624291
RGD:1600115
G Ephb2 Eph receptor B2 JBrowse link 5 155,024,478 155,143,539 RGD:1624291
G Ephb3 Eph receptor B3 JBrowse link 11 83,527,960 83,546,742 RGD:1624291
G Flrt1 fibronectin leucine rich transmembrane protein 1 JBrowse link 1 222,340,481 222,417,915 RGD:1624291
G Flrt2 fibronectin leucine rich transmembrane protein 2 JBrowse link 6 119,518,459 119,613,534 RGD:1624291
G Flrt3 fibronectin leucine rich transmembrane protein 3 JBrowse link 3 134,684,446 134,696,586 RGD:1624291
RGD:1600115
G Ghrl ghrelin and obestatin prepropeptide JBrowse link 4 145,674,157 145,678,066 RGD:1624291
G Grid2 glutamate ionotropic receptor delta type subunit 2 JBrowse link 4 94,068,112 95,476,864 RGD:1600115
RGD:1624291
G Il1rap interleukin 1 receptor accessory protein JBrowse link 11 77,456,648 77,593,208 RGD:1600115
RGD:1624291
G Il1rapl1 interleukin 1 receptor accessory protein-like 1 JBrowse link X 55,439,388 57,004,865 RGD:1624291
RGD:1600115
G Lingo2 leucine rich repeat and Ig domain containing 2 JBrowse link 5 51,466,367 51,638,161 RGD:1624291
G Lingo4 leucine rich repeat and Ig domain containing 4 JBrowse link 2 195,617,044 195,643,502 RGD:1624291
G LOC102547963 leucine-rich repeat and transmembrane domain-containing protein 1-like JBrowse link 16 5,078,506 5,089,888 RGD:1624291
G Lrrc24 leucine rich repeat containing 24 JBrowse link 7 117,779,733 117,786,872 RGD:1624291
G Lrrc4b leucine rich repeat containing 4B JBrowse link 1 100,434,418 100,468,914 RGD:1624291
G Lrrn1 leucine rich repeat neuronal 1 JBrowse link 4 139,633,310 139,679,730 RGD:1624291
G Lrrn3 leucine rich repeat neuronal 3 JBrowse link 6 61,374,328 61,405,195 RGD:1624291
RGD:1600115
G LRRTM1 leucine rich repeat transmembrane neuronal 1 JBrowse link 4 108,300,927 108,316,373 RGD:1624291
G Lrrtm2 leucine rich repeat transmembrane neuronal 2 JBrowse link 18 28,012,877 28,017,925 RGD:1624291
G Lrrtm3 leucine rich repeat transmembrane neuronal 3 JBrowse link 20 25,990,304 26,163,656 RGD:1624291
G Lrrtm4 leucine rich repeat transmembrane neuronal 4 JBrowse link 4 110,699,577 111,497,643 RGD:1624291
G Lrtm1 leucine-rich repeats and transmembrane domains 1 JBrowse link 16 4,993,728 5,005,110 RGD:1624291
G Lrtm2 leucine-rich repeats and transmembrane domains 2 JBrowse link 4 151,375,568 151,397,485 RGD:1624291
G Nlgn1 neuroligin 1 JBrowse link 2 111,057,291 111,973,681 RGD:1624291
RGD:8553502
RGD:8554205
G Nlgn2 neuroligin 2 JBrowse link 10 56,431,586 56,444,847 RGD:8554205
G Nlgn3 neuroligin 3 JBrowse link X 71,199,390 71,227,460 RGD:8554205
RGD:1600115
RGD:1624291
G Nrxn1 neurexin 1 JBrowse link 6 13,886,757 15,191,660 RGD:1624291
RGD:1600115
RGD:8554205
G Ntrk1 neurotrophic receptor tyrosine kinase 1 JBrowse link 2 187,143,568 187,160,373 RGD:1624291
G Ntrk2 neurotrophic receptor tyrosine kinase 2 JBrowse link 17 5,934,651 6,245,778 RGD:1624291
RGD:1600115
G Ntrk3 neurotrophic receptor tyrosine kinase 3 JBrowse link 1 139,890,537 140,262,503 RGD:1624291
G Oxt oxytocin/neurophysin I prepropeptide JBrowse link 3 123,106,694 123,107,534 RGD:2304173
G Oxtr oxytocin receptor JBrowse link 4 144,399,326 144,417,598 RGD:2304173
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 JBrowse link 2 31,742,326 31,826,882 RGD:15023480
G Prkca protein kinase C, alpha JBrowse link 10 96,186,509 96,585,168 RGD:2293299
G Ptprd protein tyrosine phosphatase, receptor type, D JBrowse link 5 92,862,229 93,514,071 RGD:1624291
G Slitrk1 SLIT and NTRK-like family, member 1 JBrowse link 15 93,303,382 93,307,420 RGD:1624291
G Slitrk2 SLIT and NTRK-like family, member 2 JBrowse link X 151,099,388 151,111,816 RGD:1624291
G Slitrk3 SLIT and NTRK-like family, member 3 JBrowse link 2 170,446,582 170,461,513 RGD:1624291
G Slitrk4 SLIT and NTRK-like family, member 4 JBrowse link X 147,582,195 147,589,529 RGD:1624291
G Slitrk5 SLIT and NTRK-like family, member 5 JBrowse link 15 96,817,907 96,826,760 RGD:1624291
G Slitrk6 SLIT and NTRK-like family, member 6 JBrowse link 15 95,507,632 95,514,259 RGD:1624291
G Srpx2 sushi-repeat-containing protein, X-linked 2 JBrowse link X 104,734,035 104,760,658 RGD:8553698
RGD:1624291
G Stau2 staufen double-stranded RNA binding protein 2 JBrowse link 5 2,257,910 2,497,429 RGD:10043163
G Syndig1 synapse differentiation inducing 1 JBrowse link 3 145,031,427 145,199,273 RGD:8554654
RGD:1624291
G Thbs2 thrombospondin 2 JBrowse link 1 56,653,929 56,683,571 RGD:1580068
G Tpbg trophoblast glycoprotein JBrowse link 8 93,491,761 93,495,132 RGD:1624291
G Ube2v2 ubiquitin conjugating enzyme E2 V2 JBrowse link 11 89,557,273 89,591,175 RGD:1299567
G Wnt7a Wnt family member 7A JBrowse link 4 122,994,425 123,040,609 RGD:1624291
positive regulation of excitatory synapse assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sema4a semaphorin 4A JBrowse link 2 187,799,568 187,823,014 RGD:1624291
G Vstm5 V-set and transmembrane domain containing 5 JBrowse link 8 13,796,009 13,816,125 RGD:1624291
RGD:1600115
G Wnt7a Wnt family member 7A JBrowse link 4 122,994,425 123,040,609 RGD:1624291
positive regulation of inhibitory synapse assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sema4a semaphorin 4A JBrowse link 2 187,799,568 187,823,014 RGD:1624291
G Sema4d semaphorin 4D JBrowse link 17 13,516,276 13,538,513 RGD:1624291
positive regulation of presynaptic active zone assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nlgn1 neuroligin 1 JBrowse link 2 111,057,291 111,973,681 RGD:8554205
G Nrxn1 neurexin 1 JBrowse link 6 13,886,757 15,191,660 RGD:8554205
positive regulation of synaptic growth at neuromuscular junction term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Agrn agrin JBrowse link 5 173,589,910 173,622,813 RGD:1624291
RGD:1600115
G Gsk3b glycogen synthase kinase 3 beta JBrowse link 11 65,060,884 65,208,842 RGD:15023478
G Musk muscle associated receptor tyrosine kinase JBrowse link 5 75,392,790 75,498,694 RGD:2317108

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19336
    positive regulation of biological process 6410
      positive regulation of cellular component biogenesis 560
        positive regulation of cell junction assembly 118
          positive regulation of synapse assembly 78
            positive regulation of excitatory synapse assembly 3
            positive regulation of inhibitory synapse assembly 2
            positive regulation of presynapse assembly + 2
            positive regulation of synaptic growth at neuromuscular junction 3
Path 2
Term Annotations click to browse term
  biological_process 19336
    developmental process 6638
      anatomical structure development 6107
        multicellular organism development 5579
          system development 5100
            nervous system development 2602
              regulation of nervous system development 1108
                regulation of synapse assembly 123
                  positive regulation of synapse assembly 78
                    positive regulation of excitatory synapse assembly 3
                    positive regulation of inhibitory synapse assembly 2
                    positive regulation of presynapse assembly + 2
                    positive regulation of synaptic growth at neuromuscular junction 3
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.